Pregenerated sensors for GEM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028214Ensembl transcript IDs: ENSMUST00000029868.7, ENSMUST00000108304.9
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTAGTAAGCCTCAGTTTCCAGCAAATTCTAACAATTCTCTTCACTaGAGCAGAAATAGTCACAACTGTGATGAGGCCAGCTCTAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: VSKPQFPANSNNSLH*SRNSHNCDEASSKD Trigger: ATCTTTAGAGCTGGCCTCATCACAGTTGTGACTATTTCTGCTCCAGTGAAGAGAATTGTTAGAATTTGCTGGAAACTGAGGCTTACTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR-3UTR GCA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTCTGTTGGTTTCCATCTaGCATAGGGGAAGTTGCGTC | + |
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Preference number: 2 (lower is better) Translates to: KYAVSPSPSNKLPPFPYILLVSI*HRGSCV Trigger: GACGCAACTTCCCCTATGGCAGATGGAAACCAACAG...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR-3UTR GCA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTCTGTTGGTTTCCATCTaGCATAGGGGAAGTTGCGTC | + |
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Preference number: 2 (lower is better) Translates to: KNILLSKGERNSCEPEACLLVSI*HRGSCV Trigger: GACGCAACTTCCCCTATGGCAGATGGAAACCAACAG...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGATGAGGCCAGCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGACAAGGCTAACCTGTTaGTTTCCATCTGCCATAGGG | + |
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Preference number: 2 (lower is better) Translates to: TVMRPALKMSFQGYKYAVTRLTC*FPSAIG Trigger: CCCTATGGCAGATGGAAACCAACAGGTTAGCCTTGT...CACTGCATACTTATATCCCTGAAACGACATCTTTAGAGCTGGCCTCATCACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR-3UTR CCA 90 bp | AATATAATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTAACAAGGCTAACCTGTTaGTTTCCATCTGCCATAGGG | + |
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Preference number: 2 (lower is better) Translates to: NIIQLWHTRSNPKDGACLTRLTC*FPSAIG Trigger: CCCTATGGCAGATGGAAACCAACAGGTTAGCCTTGT...TAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAATTATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR-3UTR TCA 90 bp | AATATAATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTAATAAATACTGACTCTTaGCAGAGCTCATTCATTGCC | + |
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Preference number: 2 (lower is better) Translates to: NIIQLWHTRSNPKDGACLINTDS*QSSFIA Trigger: GGCAATGAATGAGCTCTGTCAAGAGTCAGTATTTAT...TAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAATTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR CCA 72 bp | TGCCCGTGCACTTGGTTGCCCACAAGGCTAACCTGTTaGTTTCCATCTGCCATAGGGGAAGTTGCGTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: CPCTWLPTRLTC*FPSAIGEVASN Trigger: GTTAGACGCAACTTCCCCTATGGCAGATGGAAACCAACAGGTTAGCCTTGTGGGCAACCAAGTGCACGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR-3UTR CAA 90 bp | GCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGAGCCCTTCTCCTTCCTCATTGCCCGTGCACTaGGTTGCCCACAAGGCTAAC | + |
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Preference number: 3 (lower is better) Translates to: ALKMSFQGYKYAVSPSPSSLPVH*VAHKAN Trigger: GTTAGCCTTGTGGGCAACCAAGTGCACGGGCAATGA...GGAAGGAGAAGGGCTCACTGCATACTTATATCCCTGAAACGACATCTTTAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR-3UTR CAA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTCACAAGGCTAACCTGTaGGTTTCCATCTGCCATAGG | + |
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Preference number: 3 (lower is better) Translates to: KNILLSKGERNSCEPEACHKANL*VSICHR Trigger: CCTATGGCAGATGGAAACCAACAGGTTAGCCTTGTG...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR-3UTR CAA 90 bp | AATATAATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTACACAAGGCTAACCTGTaGGTTTCCATCTGCCATAGG | + |
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Preference number: 3 (lower is better) Translates to: NIIQLWHTRSNPKDGACLHKANL*VSICHR Trigger: CCTATGGCAGATGGAAACCAACAGGTTAGCCTTGTG...TAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAATTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR TCA 72 bp | CACGTAGCAGGTCAAGCTTTTCCTATGAATAAATACTaGCTCTTGACAGAGCTCATTCATTGCCCGTGCACT | + |
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Preference number: 3 (lower is better) Translates to: HVAGQAFPMNKY*LLTELIHCPCT Trigger: AGTGCACGGGCAATGAATGAGCTCTGTCAAGAGTCAGTATTTATTCATAGGAAAAGCTTGACCTGCTACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| 3UTR CCA 72 bp | CCTCAGTTTCCAGCAAATTCTAACAATTCTCTTCACTaGAGCAGAAATAGTCACAACTGTGATGAGGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PQFPANSNNSLH*SRNSHNCDEAS Trigger: GCTGGCCTCATCACAGTTGTGACTATTTCTGCTCCAGTGAAGAGAATTGTTAGAATTTGCTGGAAACTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR CCA 90 bp | AGAGCTCATTCATTGCCCGTGCACTTGGTTGCCCACAAGGCTAACCTGTTGGTTACTCCAGCGCTGCTGTaGCTGCATGCCCACAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RAHSLPVHLVAHKANLLVTPALL*LHAHSA Trigger: GGCACTGTGGGCATGCAGCCACAGCAGCGCTGGAGT...AACCAACAGGTTAGCCTTGTGGGCAACCAAGTGCACGGGCAATGAATGAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR CCA 90 bp | ACTCTTGACAGAGCTCATTCATTGCCCGTGCACTTGGTTGCCCACAAGGCTAACGGGTGGGGATCCTTCTaGACCATCAGATGCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: TLDRAHSLPVHLVAHKANGWGSF*TIRCLA Trigger: TGCCAGGCATCTGATGGTCCAGAAGGATCCCCACCC...GTTAGCCTTGTGGGCAACCAAGTGCACGGGCAATGAATGAGCTCTGTCAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | GCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGAGCCCTTCTCCTTCCCTGTCTGCCGGGCCCTaGGGAGCTGAATCCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ALKMSFQGYKYAVSPSPSLSAGP*GAESSA Trigger: AGCTGAGGATTCAGCTCCGCAGGGCCCGGCAGACAG...GGAAGGAGAAGGGCTCACTGCATACTTATATCCCTGAAACGACATCTTTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR CCA 90 bp | ACTCTTGACAGAGCTCATTCATTGCCCGTGCACTTGGTTGCCCACAAGGCTAACAGATGTTGGCCAGGGTaGACTTGCCCACTCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: TLDRAHSLPVHLVAHKANRCWPG*TCPLLA Trigger: AGCAAGGAGTGGGCAAGTCCACCCTGGCCAACATCT...GTTAGCCTTGTGGGCAACCAAGTGCACGGGCAATGAATGAGCTCTGTCAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR TCA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTCGGGCCCTGCGGAGCTaGATCCTCAGCTCAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: KYAVSPSPSNKLPPFPYIRALRS*ILSSDA Trigger: GGCATCTGAGCTGAGGATTCAGCTCCGCAGGGCCCG...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | ACTGTGATGAGGCCAGCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGCTGTCTGCCGGGCCCTaGGGAGCTGAATCCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TVMRPALKMSFQGYKYAVLSAGP*GAESSA Trigger: AGCTGAGGATTCAGCTCCGCAGGGCCCGGCAGACAG...CACTGCATACTTATATCCCTGAAACGACATCTTTAGAGCTGGCCTCATCACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR CCA 90 bp | TTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTGACTCCAGCGCTGCTGTaGCTGCATGCCCACAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: FSCGIQEATQRMGHVYVLTPALL*LHAHSA Trigger: GGCACTGTGGGCATGCAGCCACAGCAGCGCTGGAGT...CAAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTGGGATACTCCAGCGCTaGTGTGGCTGCATGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: KNILLSKGERNSCEPEACGILQR*CGCMPT Trigger: TGTGGGCATGCAGCCACAGCAGCGCTGGAGTATCCC...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTGGCGGTTTCGGAGGTTaGAGGGGTGGGGATCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KYAVSPSPSNKLPPFPYIGGFGG*RGGDPS Trigger: AGAAGGATCCCCACCCCTGCAACCTCCGAAACCGCC...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | CACCATTTCCCTACATTTCTATATGACCCAAGGACCTCGAAATCACATGGAACAGGCGGTTTCGGAGGTTaGAGGGGTGGGGATCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HHFPTFLYDPRTSKSHGTGGFGG*RGGDPS Trigger: AGAAGGATCCCCACCCCTGCAACCTCCGAAACCGCC...TGTTCCATGTGATTTCGAGGTCCTTGGGTCATATAGAAATGTAGGGAAATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | ACTCTTGACAGAGCTCATTCATTGCCCGTGCACTTGGTTGCCCACAAGGCTAACCTGTCCATGCTGTCATaGACACCTGCAAAGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: TLDRAHSLPVHLVAHKANLSMLS*TPAKML Trigger: CAACATCTTTGCAGGTGTGCATGACAGCATGGACAG...GTTAGCCTTGTGGGCAACCAAGTGCACGGGCAATGAATGAGCTCTGTCAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | GCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGAGCCCTTCTCCTTCCAGTTCCTTCACGTTGTaGTGCACAGCCGCAGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: ALKMSFQGYKYAVSPSPSSSFTL*CTAAEV Trigger: GACCTCTGCGGCTGTGCAGCACAACGTGAAGGAACT...GGAAGGAGAAGGGCTCACTGCATACTTATATCCCTGAAACGACATCTTTAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR CCA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTAGCGCCTGGCTTTCCTaGGAATGCTCTCCCGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KNILLSKGERNSCEPEACSAWLS*ECSPAS Trigger: AGAGGCGGGAGAGCATTCCCAGGAAAGCCAGGCGCT...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR CCA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTAGCGCCTGGCTTTCCTaGGAATGCTCTCCCGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KYAVSPSPSNKLPPFPYISAWLS*ECSPAS Trigger: AGAGGCGGGAGAGCATTCCCAGGAAAGCCAGGCGCT...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTTCCTTCACGTTGTGCTaGACAGCCGCAGAGGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: KNILLSKGERNSCEPEACSFTLC*TAAEVS Trigger: CGAGACCTCTGCGGCTGTGCAGCACAACGTGAAGGA...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | CACCATTTCCCTACATTTCTATATGACCCAAGGACCTCGAAATCACATGGAACATCCTTCACGTTGTGCTaGACAGCCGCAGAGGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: HHFPTFLYDPRTSKSHGTSFTLC*TAAEVS Trigger: CGAGACCTCTGCGGCTGTGCAGCACAACGTGAAGGA...TGTTCCATGTGATTTCGAGGTCCTTGGGTCATATAGAAATGTAGGGAAATGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | TTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTGTCTCATTCTTCTCCTTaGTGTCCCTGCGCAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: FSCGIQEATQRMGHVYVLSHSSP*CPCAGA Trigger: TGCGCCTGCGCAGGGACAGCAAGGAGAAGAATGAGA...CAAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR CCA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTGGGTGGGGATCCTTCTaGACCATCAGATGCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: KNILLSKGERNSCEPEACGWGSF*TIRCLA Trigger: TGCCAGGCATCTGATGGTCCAGAAGGATCCCCACCC...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR TCA 90 bp | ATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTCAGACTCAGAAGAGATaGCCGAGTCTGTGGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: IQLWHTRSNPKDGACLCFQTQKR*PSLWSR Trigger: CCGACTCCACAGACTCGGTCATCTCTTCTGAGTCTG...AAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR TCA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTCAGACTCAGAAGAGATaGCCGAGTCTGTGGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: KNILLSKGERNSCEPEACQTQKR*PSLWSR Trigger: CCGACTCCACAGACTCGGTCATCTCTTCTGAGTCTG...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | GCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGAGCCCTTCTCCTTCCTTCTGGACCATCAGATaGCTGGCATCAGCAGGGATA | + |
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Preference number: 4 (lower is better) Translates to: ALKMSFQGYKYAVSPSPSFWTIR*LASAGI Trigger: TATCCCTGCTGATGCCAGGCATCTGATGGTCCAGAA...GGAAGGAGAAGGGCTCACTGCATACTTATATCCCTGAAACGACATCTTTAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | TTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTGGCTGTCATGCACACCTaGAAAGATGTTGGCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: FSCGIQEATQRMGHVYVLAVMHT*KDVGQG Trigger: ACCCTGGCCAACATCTTTGCAGGTGTGCATGACAGC...CAAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | ACTGTGATGAGGCCAGCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGCACAGTCGCTGTCCATaGTGTCATGCACACCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: TVMRPALKMSFQGYKYAVHSRCP*CHAHLQ Trigger: TTGCAGGTGTGCATGACAGCATGGACAGCGACTGTG...CACTGCATACTTATATCCCTGAAACGACATCTTTAGAGCTGGCCTCATCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTCATCCCCGACCTGCATaGAGTGGTCATGGAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: KYAVSPSPSNKLPPFPYIHPRPA*SGHGAI Trigger: AATGGCTCCATGACCACTGCATGCAGGTCGGGGATG...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTCATCCCCGACCTGCATaGAGTGGTCATGGAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: KNILLSKGERNSCEPEACHPRPA*SGHGAI Trigger: AATGGCTCCATGACCACTGCATGCAGGTCGGGGATG...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTAGTTCCTTCACGTTGTaGTGCACAGCCGCAGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: KNILLSKGERNSCEPEACSSFTL*CTAAEV Trigger: GACCTCTGCGGCTGTGCAGCACAACGTGAAGGAACT...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | GCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGAGCCCTTCTCCTTCCGCACCTGTCGCACAATaGCCTCAAACAGTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: ALKMSFQGYKYAVSPSPSAPVAQ*PQTVPS Trigger: TGAAGGAACTGTTTGAGGGCATTGTGCGACAGGTGC...GGAAGGAGAAGGGCTCACTGCATACTTATATCCCTGAAACGACATCTTTAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTTCTCATTCTTCTCCTTaGTGTCCCTGCGCAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: KNILLSKGERNSCEPEACSHSSP*CPCAGA Trigger: TGCGCCTGCGCAGGGACAGCAAGGAGAAGAATGAGA...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR GCA 90 bp | GCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGAGCCCTTCTCCTTCCTTTTGGCCACAATTTTaGCCCAGAAGCGCCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ALKMSFQGYKYAVSPSPSFWPQF*PRSAWL Trigger: AAGCCAGGCGCTTCTGGGGCAAAATTGTGGCCAAAA...GGAAGGAGAAGGGCTCACTGCATACTTATATCCCTGAAACGACATCTTTAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR CCA 90 bp | GCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGAGCCCTTCTCCTTCCATGCCCACAGTGCCTTaGCGCATGGTGACATTATTC | + |
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Preference number: 4 (lower is better) Translates to: ALKMSFQGYKYAVSPSPSMPTVP*RMVTLF Trigger: GAATAATGTCACCATGCGCCAAGGCACTGTGGGCAT...GGAAGGAGAAGGGCTCACTGCATACTTATATCCCTGAAACGACATCTTTAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR CCA 90 bp | ATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTTGCATGCAGTGGTCATaGAGCCATTCGTTCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: IQLWHTRSNPKDGACLCFCMQWS*SHSFSP Trigger: GGGGGAGAACGAATGGCTCCATGACCACTGCATGCA...AAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS-3UTR CCA 90 bp | CACCATTTCCCTACATTTCTATATGACCCAAGGACCTCGAAATCACATGGAACACCGACCTGCATGCAGTaGTCATGGAGCCATTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHFPTFLYDPRTSKSHGTPTCMQ*SWSHSF Trigger: GAACGAATGGCTCCATGACCACTGCATGCAGGTCGG...TGTTCCATGTGATTTCGAGGTCCTTGGGTCATATAGAAATGTAGGGAAATGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR TCA 90 bp | ACTGTGATGAGGCCAGCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGACAAGCTCTCCCTTCTaGCACAGACACTTCTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: TVMRPALKMSFQGYKYAVTSSPF*HRHFST Trigger: TGTCGAGAAGTGTCTGTGTCAGAAGGGAGAGCTTGT...CACTGCATACTTATATCCCTGAAACGACATCTTTAGAGCTGGCCTCATCACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTGCTGTCATGCACACCTaGAAAGATGTTGGCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KYAVSPSPSNKLPPFPYIAVMHT*KDVGQG Trigger: ACCCTGGCCAACATCTTTGCAGGTGTGCATGACAGC...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTGAATCCTCAGCTCAGATaGCTTCTCGAAGCTTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: FSCGIQEATQRMGHVYVLNPQLR*LLEACT Trigger: CGTGCAAGCTTCGAGAAGGCATCTGAGCTGAGGATT...CAAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAGTAAGCCTCAGTTTCCAGCAAATTCTAACAATTCTCTTCACTGGAGCGGACCATCAGATGCCTaGCATCAGCAGGGATACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVSKPQFPANSNNSLHWSGPSDA*HQQGYS Trigger: GGAGTATCCCTGCTGATGCCAGGCATCTGATGGTCC...GCTCCAGTGAAGAGAATTGTTAGAATTTGCTGGAAACTGAGGCTTACTAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAGTAAGCCTCAGTTTCCAGCAAATTCTAACAATTCTCTTCACTGGAGCAGATGTTGGCCAGGGTaGACTTGCCCACTCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSKPQFPANSNNSLHWSRCWPG*TCPLLA Trigger: AGCAAGGAGTGGGCAAGTCCACCCTGGCCAACATCT...GCTCCAGTGAAGAGAATTGTTAGAATTTGCTGGAAACTGAGGCTTACTAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAGTAAGCCTCAGTTTCCAGCAAATTCTAACAATTCTCTTCACTGGAGCTGCATGCAGTGGTCATaGAGCCATTCGTTCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVSKPQFPANSNNSLHWSCMQWS*SHSFSP Trigger: GGGGGAGAACGAATGGCTCCATGACCACTGCATGCA...GCTCCAGTGAAGAGAATTGTTAGAATTTGCTGGAAACTGAGGCTTACTAACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAGTAAGCCTCAGTTTCCAGCAAATTCTAACAATTCTCTTCACTGGAGCCCGACCTGCATGCAGTaGTCATGGAGCCATTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVSKPQFPANSNNSLHWSPTCMQ*SWSHSF Trigger: GAACGAATGGCTCCATGACCACTGCATGCAGGTCGG...GCTCCAGTGAAGAGAATTGTTAGAATTTGCTGGAAACTGAGGCTTACTAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | ATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTTTCTGGACCATCAGATaGCTGGCATCAGCAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: IQLWHTRSNPKDGACLCFFWTIR*LASAGI Trigger: TATCCCTGCTGATGCCAGGCATCTGATGGTCCAGAA...AAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | CACCATTTCCCTACATTTCTATATGACCCAAGGACCTCGAAATCACATGGAACAGACTTGCCCACTCCTTaGTCCCCTATAAGCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: HHFPTFLYDPRTSKSHGTDLPTP*SPISTT Trigger: AGTAGTGCTTATAGGGGAGCAAGGAGTGGGCAAGTC...TGTTCCATGTGATTTCGAGGTCCTTGGGTCATATAGAAATGTAGGGAAATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTGATGAGGCCAGCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGCTGTCCATGCTGTCATaGACACCTGCAAAGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVMRPALKMSFQGYKYAVLSMLS*TPAKML Trigger: CAACATCTTTGCAGGTGTGCATGACAGCATGGACAG...CACTGCATACTTATATCCCTGAAACGACATCTTTAGAGCTGGCCTCATCACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | ATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTAATCCTCAGCTCAGATaGCTTCTCGAAGCTTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: IQLWHTRSNPKDGACLCFNPQLR*LLEACT Trigger: CGTGCAAGCTTCGAGAAGGCATCTGAGCTGAGGATT...AAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTGCACCTGTCGCACAATaGCCTCAAACAGTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KYAVSPSPSNKLPPFPYIAPVAQ*PQTVPS Trigger: TGAAGGAACTGTTTGAGGGCATTGTGCGACAGGTGC...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | CACCATTTCCCTACATTTCTATATGACCCAAGGACCTCGAAATCACATGGAACATTTTGGCCACAATTTTaGCCCAGAAGCGCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HHFPTFLYDPRTSKSHGTFWPQF*PRSAWL Trigger: AAGCCAGGCGCTTCTGGGGCAAAATTGTGGCCAAAA...TGTTCCATGTGATTTCGAGGTCCTTGGGTCATATAGAAATGTAGGGAAATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CCA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTATGCCCACAGTGCCTTaGCGCATGGTGACATTATTC | + |
|
Preference number: 4 (lower is better) Translates to: KYAVSPSPSNKLPPFPYIMPTVP*RMVTLF Trigger: GAATAATGTCACCATGCGCCAAGGCACTGTGGGCAT...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR TCA 90 bp | AATATAATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTAACAAGCTCTCCCTTCTaGCACAGACACTTCTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: NIIQLWHTRSNPKDGACLTSSPF*HRHFST Trigger: TGTCGAGAAGTGTCTGTGTCAGAAGGGAGAGCTTGT...TAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAATTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR TCA 90 bp | ACTGTGATGAGGCCAGCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGGTCATGGCAGGATTTTaGCTTGAGCTTGAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVMRPALKMSFQGYKYAVVMAGF*LELESH Trigger: ATGGCTTTCAAGCTCAAGTCAAAATCCTGCCATGAC...CACTGCATACTTATATCCCTGAAACGACATCTTTAGAGCTGGCCTCATCACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTTAGTAAGCCTCAGTTTCCAGCAAATTCTAACAATTCTCTTCACTGGAGCGACTTGCCCACTCCTTaGTCCCCTATAAGCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: TVSKPQFPANSNNSLHWSDLPTP*SPISTT Trigger: AGTAGTGCTTATAGGGGAGCAAGGAGTGGGCAAGTC...GCTCCAGTGAAGAGAATTGTTAGAATTTGCTGGAAACTGAGGCTTACTAACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CCA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTAGCACAGACAGGTCATaGCAGGATTTTGACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNILLSKGERNSCEPEACSTDRS*QDFDLS Trigger: GCTCAAGTCAAAATCCTGCCATGACCTGTCTGTGCT...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR TCA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTGTCATGGCAGGATTTTaGCTTGAGCTTGAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KYAVSPSPSNKLPPFPYIVMAGF*LELESH Trigger: ATGGCTTTCAAGCTCAAGTCAAAATCCTGCCATGAC...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTTAGTAAGCCTCAGTTTCCAGCAAATTCTAACAATTCTCTTCACTGGAGCTGCCTTCTCGAAGCTTaGACGGTCTGTGATAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVSKPQFPANSNNSLHWSCLLEA*TVCDRV Trigger: TACTCTATCACAGACCGTGCAAGCTTCGAGAAGGCA...GCTCCAGTGAAGAGAATTGTTAGAATTTGCTGGAAACTGAGGCTTACTAACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR GCA 90 bp | AATATAATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGCCTTCTCGAAGCTTaGACGGTCTGTGATAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NIIQLWHTRSNPKDGACLCLLEA*TVCDRV Trigger: TACTCTATCACAGACCGTGCAAGCTTCGAGAAGGCA...TAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAATTATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTTAGTAAGCCTCAGTTTCCAGCAAATTCTAACAATTCTCTTCACTGGAGCAGCACAGACAGGTCATaGCAGGATTTTGACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVSKPQFPANSNNSLHWSSTDRS*QDFDLS Trigger: GCTCAAGTCAAAATCCTGCCATGACCTGTCTGTGCT...GCTCCAGTGAAGAGAATTGTTAGAATTTGCTGGAAACTGAGGCTTACTAACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS GCA 90 bp | GAGATGACCGAGTCTGTGGAGTCGGACGACCAGCTCCGCCGGCAGTaGTCTTCCGGAGCAGTAGAGTGGCGGTTTCGGAGGTTGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EMTESVESDDQLRRQ*SSGAVEWRFRRLQG Trigger: CCCCTGCAACCTCCGAAACCGCCACTCTACTGCTCCGGAAGAGCACTGCCGGCGGAGCTGGTCGTCCGACTCCACAGACTCGGTCATCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS CCA 90 bp | TCGGACGACCAGCTCCGCCGGCAGTGCTCTTCCGGAGCAGTAGAGTaGCGGTTTCGGAGGTTGCAGGGGTGGGGATCCTTCTGGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: SDDQLRRQCSSGAVE*RFRRLQGWGSFWTI Trigger: GATGGTCCAGAAGGATCCCCACCCCTGCAACCTCCGAAACCGCCACTCTACTGCTCCGGAAGAGCACTGCCGGCGGAGCTGGTCGTCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS CCA 90 bp | GCAGTAGAGTGGCGGTTTCGGAGGTTGCAGGGGTGGGGATCCTTCTaGACCATCAGATGCCTGGCATCAGCAGGGATACTCCAGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AVEWRFRRLQGWGSF*TIRCLASAGILQRC Trigger: GCAGCGCTGGAGTATCCCTGCTGATGCCAGGCATCTGATGGTCCAGAAGGATCCCCACCCCTGCAACCTCCGAAACCGCCACTCTACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS CCA 90 bp | TGCTCTTCCGGAGCAGTAGAGTGGCGGTTTCGGAGGTTGCAGGGGTaGGGATCCTTCTGGACCATCAGATGCCTGGCATCAGCAGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CSSGAVEWRFRRLQG*GSFWTIRCLASAGI Trigger: TATCCCTGCTGATGCCAGGCATCTGATGGTCCAGAAGGATCCCCACCCCTGCAACCTCCGAAACCGCCACTCTACTGCTCCGGAAGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCTCATTCATTGCCCGTGCACTTGGTTGCCCACAAGGCTAACCTGTTGGTTCTCTCATTCTTCTCCTaGCTGTCCCTGCGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RAHSLPVHLVAHKANLLVLSFFS*LSLRRR Trigger: GCGCCTGCGCAGGGACAGCAAGGAGAAGAATGAGAG...AACCAACAGGTTAGCCTTGTGGGCAACCAAGTGCACGGGCAATGAATGAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS GCA 90 bp | TATGTATCTTCTCCCAAGACCTCACAGTCGCTGTCCATGCTGTCATaGACACCTGCAAAGATGTTGGCCAGGGTGGACTTGCCCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YVSSPKTSQSLSMLS*TPAKMLARVDLPTP Trigger: AGGAGTGGGCAAGTCCACCCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGTGAGGTCTTGGGAGAAGATACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCTCATTCATTGCCCGTGCACTTGGTTGCCCACAAGGCTAACCTGTTGGTTGGACTTGCCCACTCCTaGCTCCCCTATAAGCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: RAHSLPVHLVAHKANLLVGLAHS*LPYKHY Trigger: GTAGTGCTTATAGGGGAGCAAGGAGTGGGCAAGTCC...AACCAACAGGTTAGCCTTGTGGGCAACCAAGTGCACGGGCAATGAATGAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | GCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGAGCCCTTCTCCTTCCTTGGCCAGGGTGGACTaGCCCACTCCTTGCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALKMSFQGYKYAVSPSPSLARVD*PTPCSP Trigger: AGGGGAGCAAGGAGTGGGCAAGTCCACCCTGGCCAA...GGAAGGAGAAGGGCTCACTGCATACTTATATCCCTGAAACGACATCTTTAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS GCA 90 bp | TACGCTCATATGTATCTTCTCCCAAGACCTCACAGTCGCTGTCCATaGTGTCATGCACACCTGCAAAGATGTTGGCCAGGGTGGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: YAHMYLLPRPHSRCP*CHAHLQRCWPGWTC Trigger: GCAAGTCCACCCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGTGAGGTCTTGGGAGAAGATACATATGAGCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTGTTGGCCAGGGTGGACTaGCCCACTCCTTGCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSCGIQEATQRMGHVYVLLARVD*PTPCSP Trigger: AGGGGAGCAAGGAGTGGGCAAGTCCACCCTGGCCAA...CAAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS GCA 90 bp | TTCGTTCTCCCCCTTATTTTCCCACATGTCCAGGAGGATAATGGTTaGACTCTCTCCGTCAACGACCAGGGTACGCTCATATGTATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FVLPLIFPHVQEDNG*TLSVNDQGTLICIF Trigger: GAAGATACATATGAGCGTACCCTGGTCGTTGACGGAGAGAGTGCAACCATTATCCTCCTGGACATGTGGGAAAATAAGGGGGAGAACGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | AATATAATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTACTCTCATTCTTCTCCTaGCTGTCCCTGCGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NIIQLWHTRSNPKDGACLLSFFS*LSLRRR Trigger: GCGCCTGCGCAGGGACAGCAAGGAGAAGAATGAGAG...TAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAATTATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | ATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTGGACTTGCCCACTCCTaGCTCCCCTATAAGCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: IQLWHTRSNPKDGACLCFGLAHS*LPYKHY Trigger: GTAGTGCTTATAGGGGAGCAAGGAGTGGGCAAGTCC...AAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | AGAGCTCATTCATTGCCCGTGCACTTGGTTGCCCACAAGGCTAACCTGTTGGTTACTAAGTCGCTTTTGTaGCCAACCAAAATTATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RAHSLPVHLVAHKANLLVTKSLL*PTKIIG Trigger: TCCTATAATTTTGGTTGGCAACAAAAGCGACTTAGT...AACCAACAGGTTAGCCTTGTGGGCAACCAAGTGCACGGGCAATGAATGAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTGTGGCAGGATTTTGACTaGAGCTTGAAAGCCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSCGIQEATQRMGHVYVLWQDFD*SLKAMF Trigger: GAACATGGCTTTCAAGCTCAAGTCAAAATCCTGCCA...CAAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | ATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTATGTTTTTGGCAGGATTTTGACTaGAGCTTGAAAGCCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQLWHTRSNPKDGACLCFWQDFD*SLKAMF Trigger: GAACATGGCTTTCAAGCTCAAGTCAAAATCCTGCCA...AAAACATAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTGATGAGGCCAGCTCTAAAGATGTCGTTTCAGGGATATAAGTATGCAGTGGATTTTGACTTGAGCTaGAAAGCCATGTTCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TVMRPALKMSFQGYKYAVDFDLS*KAMFLL Trigger: CAACAAGAACATGGCTTTCAAGCTCAAGTCAAAATC...CACTGCATACTTATATCCCTGAAACGACATCTTTAGAGCTGGCCTCATCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTCGCACTAAGTCGCTTTaGTTGCCAACCAAAATTATA | + |
|
Preference number: 5 (lower is better) Translates to: KYAVSPSPSNKLPPFPYIRTKSL*LPTKII Trigger: TATAATTTTGGTTGGCAACAAAAGCGACTTAGTGCG...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | AATATAATTCAGCTGTGGCATACAAGAAGCAACCCAAAGGATGGGGCATGTTTACGCACTAAGTCGCTTTaGTTGCCAACCAAAATTATA | + |
|
Preference number: 5 (lower is better) Translates to: NIIQLWHTRSNPKDGACLRTKSL*LPTKII Trigger: TATAATTTTGGTTGGCAACAAAAGCGACTTAGTGCG...TAAACATGCCCCATCCTTTGGGTTGCTTCTTGTATGCCACAGCTGAATTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | AAAAATATTCTGCTGTCCAAAGGAGAGAGAAACTCATGTGAACCCGAAGCGTGTTTGAAAGCCATGTTCTaGTTGTTTTTGGCCACAATT | + |
|
Preference number: 5 (lower is better) Translates to: KNILLSKGERNSCEPEACLKAMF*LFLATI Trigger: AATTGTGGCCAAAAACAACAAGAACATGGCTTTCAA...ACACGCTTCGGGTTCACATGAGTTTCTCTCTCCTTTGGACAGCAGAATATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
||
| CDS-3UTR CAA 90 bp | AAGTATGCAGTGAGCCCTTCTCCTTCCAATAAACTACCACCATTTCCCTACATTTTGAAAGCCATGTTCTaGTTGTTTTTGGCCACAATT | + |
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Preference number: 5 (lower is better) Translates to: KYAVSPSPSNKLPPFPYILKAMF*LFLATI Trigger: AATTGTGGCCAAAAACAACAAGAACATGGCTTTCAA...AATGTAGGGAAATGGTGGTAGTTTATTGGAAGGAGAAGGGCTCACTGCATACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS GCA 72 bp | GAGTCTGTGGAGTCGGACGACCAGCTCCGCCGGCAGTaGTCTTCCGGAGCAGTAGAGTGGCGGTTTCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ESVESDDQLRRQ*SSGAVEWRFRR Trigger: CCTCCGAAACCGCCACTCTACTGCTCCGGAAGAGCACTGCCGGCGGAGCTGGTCGTCCGACTCCACAGACTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS CCA 72 bp | ATGCCTGGCATCAGCAGGGATACTCCAGCGCTGCTGTaGCTGCATGCCCACAGTGCCTTGGCGCATGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: MPGISRDTPALL*LHAHSALAHGD Trigger: GTCACCATGCGCCAAGGCACTGTGGGCATGCAGCCACAGCAGCGCTGGAGTATCCCTGCTGATGCCAGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS GCA 72 bp | CAATTTTGCCCCAGAAGCGCCTGGCTTTCCTGGGAATaGTCTCCCGCCTCTTCTGGTAGGCCAGCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QFCPRSAWLSWE*SPASSGRPASS Trigger: AGAGGAGGCTGGCCTACCAGAAGAGGCGGGAGAGCATTCCCAGGAAAGCCAGGCGCTTCTGGGGCAAAATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS CCA 72 bp | TGGCGGTTTCGGAGGTTGCAGGGGTGGGGATCCTTCTaGACCATCAGATGCCTGGCATCAGCAGGGATACTC | + |
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Preference number: 6 (lower is better) Translates to: WRFRRLQGWGSF*TIRCLASAGIL Trigger: GAGTATCCCTGCTGATGCCAGGCATCTGATGGTCCAGAAGGATCCCCACCCCTGCAACCTCCGAAACCGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS GCA 72 bp | GACCTCACAGTCGCTGTCCATGCTGTCATGCACACCTaGAAAGATGTTGGCCAGGGTGGACTTGCCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: DLTVAVHAVMHT*KDVGQGGLAHS Trigger: GGAGTGGGCAAGTCCACCCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGTGAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS GCA 72 bp | CTGCCGGGCCCTGCGGAGCTGAATCCTCAGCTCAGATaGCTTCTCGAAGCTTGCACGGTCTGTGATAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: LPGPAELNPQLR*LLEACTVCDRV Trigger: TACTCTATCACAGACCGTGCAAGCTTCGAGAAGGCATCTGAGCTGAGGATTCAGCTCCGCAGGGCCCGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS TCA 72 bp | CTACTCGGTAGTAGGTGTTTCCAGACTCAGAAGAGATaGCCGAGTCTGTGGAGTCGGACGACCAGCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LLGSRCFQTQKR*PSLWSRTTSSA Trigger: GGCGGAGCTGGTCGTCCGACTCCACAGACTCGGTCATCTCTTCTGAGTCTGGAAACACCTACTACCGAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS GCA 72 bp | TCTCCCAAGACCTCACAGTCGCTGTCCATGCTGTCATaGACACCTGCAAAGATGTTGGCCAGGGTGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: SPKTSQSLSMLS*TPAKMLARVDL Trigger: CAAGTCCACCCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGTGAGGTCTTGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS CAA 90 bp | ATGCACACCTGCAAAGATGTTGGCCAGGGTGGACTTGCCCACTCCTaGCTCCCCTATAAGCACTACTCGGTAGTAGGTGTTTCCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: MHTCKDVGQGGLAHS*LPYKHYSVVGVSRL Trigger: GAGTCTGGAAACACCTACTACCGAGTAGTGCTTATAGGGGAGCAAGGAGTGGGCAAGTCCACCCTGGCCAACATCTTTGCAGGTGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS GCA 72 bp | ATGTATCTTCTCCCAAGACCTCACAGTCGCTGTCCATaGTGTCATGCACACCTGCAAAGATGTTGGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: MYLLPRPHSRCP*CHAHLQRCWPG Trigger: CCCTGGCCAACATCTTTGCAGGTGTGCATGACAGCATGGACAGCGACTGTGAGGTCTTGGGAGAAGATACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS CAA 72 bp | TGCAAAGATGTTGGCCAGGGTGGACTTGCCCACTCCTaGCTCCCCTATAAGCACTACTCGGTAGTAGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: CKDVGQGGLAHS*LPYKHYSVVGV Trigger: AACACCTACTACCGAGTAGTGCTTATAGGGGAGCAAGGAGTGGGCAAGTCCACCCTGGCCAACATCTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS CAA 90 bp | GACTTGAGCTTGAAAGCCATGTTCTTGTTGTTTTTGGCCACAATTTaGCCCCAGAAGCGCCTGGCTTTCCTGGGAATGCTCTCCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: DLSLKAMFLLFLATI*PQKRLAFLGMLSRL Trigger: GAGGCGGGAGAGCATTCCCAGGAAAGCCAGGCGCTTCTGGGGCAAAATTGTGGCCAAAAACAACAAGAACATGGCTTTCAAGCTCAAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS GCA 72 bp | CCCCTTATTTTCCCACATGTCCAGGAGGATAATGGTTaGACTCTCTCCGTCAACGACCAGGGTACGCTCATA | + |
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Preference number: 6 (lower is better) Translates to: PLIFPHVQEDNG*TLSVNDQGTLI Trigger: TATGAGCGTACCCTGGTCGTTGACGGAGAGAGTGCAACCATTATCCTCCTGGACATGTGGGAAAATAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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| CDS CAA 72 bp | AGCACAGACAGGTCATGGCAGGATTTTGACTTGAGCTaGAAAGCCATGTTCTTGTTGTTTTTGGCCACAATT | + |
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Preference number: 6 (lower is better) Translates to: STDRSWQDFDLS*KAMFLLFLATI Trigger: AATTGTGGCCAAAAACAACAAGAACATGGCTTTCAAGCTCAAGTCAAAATCCTGCCATGACCTGTCTGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029868.7 ENSMUST00000108304.9 |
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