Pregenerated sensors for GDPGP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050973Ensembl transcript IDs: ENSMUST00000062915.9
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTTTGGTGTACAGGGTGAGTTTCAGGACAGCCAGGGCTACACAGTaGGACCCTGTAAGAGTCAGTGGCGCACCAAGGGACAAGAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: SLVYRVSFRTARATQ*DPVRVSGAPRDKSK Trigger: TTTGCTCTTGTCCCTTGGTGCGCCACTGACTCTTACAGGGTCTCACTGTGTAGCCCTGGCTGTCCTGAAACTCACCCTGTACACCAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR GCA 90 bp | CAGGGAAGAGGCAGCAGAAACATTCATGAGAACACATTCTCTCAGTaGTCTCTCTGCAGTCCTTATGTGGGGAGGTGGGAAGAAGGTCAT | + |
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Preference number: 1 (lower is better) Translates to: QGRGSRNIHENTFSQ*SLCSPYVGRWEEGH Trigger: ATGACCTTCTTCCCACCTCCCCACATAAGGACTGCAGAGAGAGCACTGAGAGAATGTGTTCTCATGAATGTTTCTGCTGCCTCTTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR TCA 90 bp | GGACCTGGTCTACAGAGTTCTAGTACAGGCAGAGAAATCCTGTCTTaGAAAACAAAAGAAGCCAGGCAGTGGTGGCGCACGCCTTTAATC | + |
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Preference number: 1 (lower is better) Translates to: GPGLQSSSTGREILS*KTKEARQWWRTPLI Trigger: GATTAAAGGCGTGCGCCACCACTGCCTGGCTTCTTTTGTTTTTCAAGACAGGATTTCTCTGCCTGTACTAGAACTCTGTAGACCAGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CCA 90 bp | AAGGAGTTTTACAACCTTTGCAAAGTCCTGGTCACTGGACAGTCCTaGCACACTGGGAATGTGCACTGTTGGGTACTGCAAACAGTATAC | + |
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Preference number: 1 (lower is better) Translates to: KEFYNLCKVLVTGQS*HTGNVHCWVLQTVY Trigger: GTATACTGTTTGCAGTACCCAACAGTGCACATTCCCAGTGTGCCAGGACTGTCCAGTGACCAGGACTTTGCAAAGGTTGTAAAACTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CCA 90 bp | TGTTTTTCTGAAGGAGTTTTACAACCTTTGCAAAGTCCTGGTCACTaGACAGTCCTGGCACACTGGGAATGTGCACTGTTGGGTACTGCA | + |
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Preference number: 1 (lower is better) Translates to: CFSEGVLQPLQSPGH*TVLAHWECALLGTA Trigger: TGCAGTACCCAACAGTGCACATTCCCAGTGTGCCAGGACTGTCCAGTGACCAGGACTTTGCAAAGGTTGTAAAACTCCTTCAGAAAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR GCA 90 bp | AGTTCCGACTGCCTATGCCTCCTGAGTGATGGATTAAAGACGATATaGCACCTAGCCTGGCTTGGTTTTGGTTTGGTTTGTAAACAGAGT | + |
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Preference number: 1 (lower is better) Translates to: SSDCLCLLSDGLKTI*HLAWLGFGLVCKQS Trigger: ACTCTGTTTACAAACCAAACCAAAACCAAGCCAGGCTAGGTGGCATATCGTCTTTAATCCATCACTCAGGAGGCATAGGCAGTCGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CCA 90 bp | GAAACTAAAACAGGGTTCTTTGATTTGAGGAGTTTGATGGTAGCTTaGGCTACAGAGCTTAGTGGCTCACATTCAGGAGGCAGAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: ETKTGFFDLRSLMVA*ATELSGSHSGGRDR Trigger: CCTGTCTCTGCCTCCTGAATGTGAGCCACTAAGCTCTGTAGCCCAAGCTACCATCAAACTCCTCAAATCAAAGAACCCTGTTTTAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CCA 90 bp | AACACATTCTCTCAGTGCTCTCTCTGCAGTCCTTATGTGGGGAGGTaGGAAGAAGGTCATGACATGAAATGCACAAATGGACTGAATTCA | + |
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Preference number: 1 (lower is better) Translates to: NTFSQCSLCSPYVGR*EEGHDMKCTNGLNS Trigger: TGAATTCAGTCCATTTGTGCATTTCATGTCATGACCTTCTTCCCACCTCCCCACATAAGGACTGCAGAGAGAGCACTGAGAGAATGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CCA 90 bp | GAAGAAGGTCATGACATGAAATGCACAAATGGACTGAATTCACATTaGCCTTTGGGAAAGGGCCTCGAATTAGTCAGCAAAGAAAACACT | + |
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Preference number: 1 (lower is better) Translates to: EEGHDMKCTNGLNSH*PLGKGLELVSKENT Trigger: AGTGTTTTCTTTGCTGACTAATTCGAGGCCCTTTCCCAAAGGCCAATGTGAATTCAGTCCATTTGTGCATTTCATGTCATGACCTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CCA 90 bp | TGTAGCAAGACATCTAGTAGAAGCACTCTAGGGTCGCCATCAGAATaGTTGTTTGCTAGAAGTGTTTTGACCTTGAAGAAATCATTAAGA | + |
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Preference number: 1 (lower is better) Translates to: CSKTSSRSTLGSPSE*LFARSVLTLKKSLR Trigger: TCTTAATGATTTCTTCAAGGTCAAAACACTTCTAGCAAACAACCATTCTGATGGCGACCCTAGAGTGCTTCTACTAGATGTCTTGCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTTGCAGGGTGGTGGTGGTaGAGGCCTTTAATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: FLCVALAGLGLTMQTGWLAGWWW*RPLIPA Trigger: TGCTGGGATTAAAGGCCTGCACCACCACCACCCTGC...AAGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCTCCAGGGCTTGTTACCCTaGGGCTTCTCAGGGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TPVYTVPGLASHCVCCNLQGLLP*GFSGKR Trigger: CCTCTTCCCTGAGAAGCCCCAGGGTAACAAGCCCTG...GAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCTCCGCCTGTCACTGTGTTaGGGGCACACAGTGTTGATA | + |
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Preference number: 2 (lower is better) Translates to: TPVYTVPGLASHCVCCNLRLSLC*GHTVLI Trigger: TATCAACACTGTGTGCCCTCAACACAGTGACAGGCG...GAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCTTCATGGCAGGGCTTGTTACCCTGGGGCTTCTCAGGGAAGAGGCAGCACATGAAATGCACAAATaGACTGAATTCACATTGGCC | + |
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Preference number: 2 (lower is better) Translates to: WPFMAGLVTLGLLREEAAHEMHK*TEFTLA Trigger: GGCCAATGTGAATTCAGTCCATTTGTGCATTTCATG...TGCTGCCTCTTCCCTGAGAAGCCCCAGGGTAACAAGCCCTGCCATGAAGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CCA 90 bp | TGTAAGCCATCAGAGCAGAGGCTGATGGTTCACACCAAAGGCGAAGTCCAGAGATCTGCAGTCCTTATGTaGGGAGGTGGGAAGAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: CKPSEQRLMVHTKGEVQRSAVLM*GGGKKV Trigger: GACCTTCTTCCCACCTCCCCACATAAGGACTGCAGA...TCTCTGGACTTCGCCTTTGGTGTGAACCATCAGCCTCTGCTCTGATGGCTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGTAAGGCTTGTGACTAAAGCTGGCCTTGATTTTGTAGCAGTCTTCCATCCCGTCACTGGACAGTCCTaGCACACTGGGAATGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: GVRLVTKAGLDFVAVFHPVTGQS*HTGNVH Trigger: GTGCACATTCCCAGTGTGCCAGGACTGTCCAGTGAC...GGGATGGAAGACTGCTACAAAATCAAGGCCAGCTTTAGTCACAAGCCTTACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGCCATCAGAGCAGAGGCTGATGGTTCACACCAAAGGCGAAGTCCAGAGACTGGAGGTTGAACCCTaGTCAACAGACTTAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: CKPSEQRLMVHTKGEVQRLEVEP*STDLAA Trigger: TGCTGCTAAGTCTGTTGATCAGGGTTCAACCTCCAG...TCTCTGGACTTCGCCTTTGGTGTGAACCATCAGCCTCTGCTCTGATGGCTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAATCTCAGTGCTCTCTCTaGAGTCCTTATGTGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RDSSIHCTRSGISLRVLQSQCSL*SPYVGR Trigger: CCTCCCCACATAAGGACTGCAGAGAGAGCACTGAGA...TTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCTCCCTTATGTGGGGAGGTaGGAAGAAGGTCATGACATG | + |
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Preference number: 2 (lower is better) Translates to: TPVYTVPGLASHCVCCNLPYVGR*EEGHDM Trigger: CATGTCATGACCTTCTTCCCACCTCCCCACATAAGG...GAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTGAGAAGTTGACCACCTaGATGAAGCAGTTGCAAATA | + |
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Preference number: 2 (lower is better) Translates to: ISLRSSGWPGTHHANRLAEKLTT*MKQLQI Trigger: TATTTGCAACTGCTTCATCCAGGTGGTCAACTTCTC...AGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCTCGTGTGTGTGTGTGAGTaGATGTATCATGGTGCACAT | + |
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Preference number: 2 (lower is better) Translates to: TPVYTVPGLASHCVCCNLVCVCE*MYHGAH Trigger: ATGTGCACCATGATACATTCACTCACACACACACAC...GAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CAA 90 bp | GGATCTCTGTGGGTTGGAGGCCAGTCAAAGCTACATAGTGAGACCTaGTCTCTCATAACAAGCAGAACACTTGCTACATTTCCTTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: GSLWVGGQSKLHSET*SLITSRTLATFPWC Trigger: GCACCAAGGAAATGTAGCAAGTGTTCTGCTTGTTATGAGAGACAAGGTCTCACTATGTAGCTTTGACTGGCCTCCAACCCACAGAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGCCATCAGAGCAGAGGCTGATGGTTCACACCAAAGGCGAAGTCCAGAGAAATGCACAAATGGACTaGATTCACATTGGCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: CKPSEQRLMVHTKGEVQRNAQMD*IHIGLW Trigger: CCAAAGGCCAATGTGAATTCAGTCCATTTGTGCATT...TCTCTGGACTTCGCCTTTGGTGTGAACCATCAGCCTCTGCTCTGATGGCTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR TCA 90 bp | GGGGTAAGGCTTGTGACTAAAGCTGGCCTTGATTTTGTAGCAGTCTTCCATCCCGTGGGAAGAAGGTCATaGCATGAAATGCACAAATGG | + |
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Preference number: 2 (lower is better) Translates to: GVRLVTKAGLDFVAVFHPVGRRS*HEMHKW Trigger: CCATTTGTGCATTTCATGTCATGACCTTCTTCCCAC...GGGATGGAAGACTGCTACAAAATCAAGGCCAGCTTTAGTCACAAGCCTTACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTCATTTCTTCCTCTGTTaGATGGAAGCAATAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: ISLRSSGWPGTHHANRLAHFFLC*MEAIKG Trigger: TCCTTTTATTGCTTCCATTCAACAGAGGAAGAAATG...AGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR GCA 90 bp | ACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCTCAACACATTCTCTCAGTaGTCTCTCTGCAGTCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: TPVYTVPGLASHCVCCNLNTFSQ*SLCSPY Trigger: ATAAGGACTGCAGAGAGAGCACTGAGAGAATGTGTT...GAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CAA 90 bp | GCTGGAGTCCCAGAGATTCAGGAAACTAAAACAGGGTTCTTTGATTaGAGGAGTTTGATGGTAGCTTGGGCTACAGAGCTTAGTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: AGVPEIQETKTGFFD*RSLMVAWATELSGS Trigger: TGAGCCACTAAGCTCTGTAGCCCAAGCTACCATCAAACTCCTCAAATCAAAGAACCCTGTTTTAGTTTCCTGAATCTCTGGGACTCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCTCAGAGAAATCCTGTCTTaGAAAACAAAAGAAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TPVYTVPGLASHCVCCNLREILS*KTKEAR Trigger: CCTGGCTTCTTTTGTTTTTCAAGACAGGATTTCTCT...GAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CAA 90 bp | CCAGAGATTCAGGAAACTAAAACAGGGTTCTTTGATTTGAGGAGTTaGATGGTAGCTTGGGCTACAGAGCTTAGTGGCTCACATTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PEIQETKTGFFDLRS*MVAWATELSGSHSG Trigger: TCCTGAATGTGAGCCACTAAGCTCTGTAGCCCAAGCTACCATCAAACTCCTCAAATCAAAGAACCCTGTTTTAGTTTCCTGAATCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCTACAGAGTTCTAGTACAGGCAGAGAAATCCTGTCTTGAAAAACAAAAGACAGCCTTTACCCTATaGGTTCTGGAGGTTGAACCC | + |
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Preference number: 2 (lower is better) Translates to: LVYRVLVQAEKSCLEKQKTAFTL*VLEVEP Trigger: GGGTTCAACCTCCAGAACCCATAGGGTAAAGGCTGT...CTTTTGTTTTTCAAGACAGGATTTCTCTGCCTGTACTAGAACTCTGTAGACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CAA 90 bp | AGCAAGACATCTAGTAGAAGCACTCTAGGGTCGCCATCAGAATGGTaGTTTGCTAGAAGTGTTTTGACCTTGAAGAAATCATTAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SKTSSRSTLGSPSEW*FARSVLTLKKSLRK Trigger: TTTTCTTAATGATTTCTTCAAGGTCAAAACACTTCTAGCAAACAACCATTCTGATGGCGACCCTAGAGTGCTTCTACTAGATGTCTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CCA 72 bp | ACTCCTCCCCCTGAAATGGTCAGATCTGGCCCTTCATaGCAGGGCTTGTTACCCTGGGGCTTCTCAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: TPPPEMVRSGPS*QGLLPWGFSGK Trigger: CTTCCCTGAGAAGCCCCAGGGTAACAAGCCCTGCCATGAAGGGCCAGATCTGACCATTTCAGGGGGAGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR TCA 72 bp | TACAGGGTGAGTTTCAGGACAGCCAGGGCTACACAGTaGGACCCTGTAAGAGTCAGTGGCGCACCAAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: YRVSFRTARATQ*DPVRVSGAPRD Trigger: GTCCCTTGGTGCGCCACTGACTCTTACAGGGTCTCACTGTGTAGCCCTGGCTGTCCTGAAACTCACCCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR GCA 72 bp | GTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTaGTGCAACCTCCACTCTGCCGTTAGCTGCCTGACC | + |
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Preference number: 3 (lower is better) Translates to: VYTVPGLASHCV*CNLHSAVSCLT Trigger: GGTCAGGCAGCTAACGGCAGAGTGGAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CAA 90 bp | TTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTTTTGGATCTCTGTGGGTaGGAGGCCAGTCAAAGCTAC | + |
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Preference number: 3 (lower is better) Translates to: FLCVALAGLGLTMQTGWLLDLCG*EASQSY Trigger: GTAGCTTTGACTGGCCTCCAACCCACAGAGATCCAA...AAGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR TCA 72 bp | ACAGCCTTTACCCTATGGGTTCTGGAGGTTGAACCCTaGTCAACAGACTTAGCAGCAAGCACTCCTCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: TAFTLWVLEVEP*STDLAASTPPP Trigger: AGGGGGAGGAGTGCTTGCTGCTAAGTCTGTTGATCAGGGTTCAACCTCCAGAACCCATAGGGTAAAGGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CCA 72 bp | GCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTaGCTTCAAACTTTCATAGAGTTCCGACTGCCTATG | + |
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Preference number: 3 (lower is better) Translates to: ALAGLGLTMQTG*LQTFIEFRLPM Trigger: CATAGGCAGTCGGAACTCTATGAAAGTTTGAAGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CAA 90 bp | ATTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTACCCATTTGCAGGAGTaGGTTCTCCTTGAACTGAGT | + |
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Preference number: 3 (lower is better) Translates to: ISLRSSGWPGTHHANRLATHLQE*VLLELS Trigger: ACTCAGTTCAAGGAGAACCAACTCCTGCAAATGGGT...AGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CAA 90 bp | GGGGTAAGGCTTGTGACTAAAGCTGGCCTTGATTTTGTAGCAGTCTTCCATCCCAGGTCTGGCATCTCATaGCGTGTGCTGCAACCTCCA | + |
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Preference number: 3 (lower is better) Translates to: GVRLVTKAGLDFVAVFHPRSGIS*RVLQPP Trigger: TGGAGGTTGCAGCACACGCAATGAGATGCCAGACCT...GGGATGGAAGACTGCTACAAAATCAAGGCCAGCTTTAGTCACAAGCCTTACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR TCA 72 bp | CCCTGGATAGCCTCCAAGTCACAGATACCTCCTTCCTaGGCCTGGCTCAGCCAATCAATCTTAACTGATGAG | + |
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Preference number: 3 (lower is better) Translates to: PWIASKSQIPPS*AWLSQSILTDE Trigger: CTCATCAGTTAAGATTGATTGGCTGAGCCAGGCTCAGGAAGGAGGTATCTGTGACTTGGAGGCTATCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CCA 72 bp | TACAACCTTTGCAAAGTCCTGGTCACTGGACAGTCCTaGCACACTGGGAATGTGCACTGTTGGGTACTGCAA | + |
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Preference number: 3 (lower is better) Translates to: YNLCKVLVTGQS*HTGNVHCWVLQ Trigger: TTGCAGTACCCAACAGTGCACATTCCCAGTGTGCCAGGACTGTCCAGTGACCAGGACTTTGCAAAGGTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CAA 90 bp | ATATTGAGTCCACAGAGCCTGGATCTCCCTGTAAGGCCATATTTCACCCTGGAGTGGACTGAATTCACATaGGCCTTTGGGAAAGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: ILSPQSLDLPVRPYFTLEWTEFT*AFGKGP Trigger: AGGCCCTTTCCCAAAGGCCAATGTGAATTCAGTCCA...CTCCAGGGTGAAATATGGCCTTACAGGGAGATCCAGGCTCTGTGGACTCAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CAA 90 bp | TGTAAGCCATCAGAGCAGAGGCTGATGGTTCACACCAAAGGCGAAGTCCAGAGATATGGGTTCTGGAGGTaGAACCCTGATCAACAGACT | + |
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Preference number: 3 (lower is better) Translates to: CKPSEQRLMVHTKGEVQRYGFWR*NPDQQT Trigger: AGTCTGTTGATCAGGGTTCAACCTCCAGAACCCATA...TCTCTGGACTTCGCCTTTGGTGTGAACCATCAGCCTCTGCTCTGATGGCTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR GCA 72 bp | GGCAGCAGAAACATTCATGAGAACACATTCTCTCAGTaGTCTCTCTGCAGTCCTTATGTGGGGAGGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GSRNIHENTFSQ*SLCSPYVGRWE Trigger: TTCCCACCTCCCCACATAAGGACTGCAGAGAGAGCACTGAGAGAATGTGTTCTCATGAATGTTTCTGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR CCA 72 bp | GAAGGAGTTTTACAACCTTTGCAAAGTCCTGGTCACTaGACAGTCCTGGCACACTGGGAATGTGCACTGTTG | + |
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Preference number: 3 (lower is better) Translates to: EGVLQPLQSPGH*TVLAHWECALL Trigger: CAACAGTGCACATTCCCAGTGTGCCAGGACTGTCCAGTGACCAGGACTTTGCAAAGGTTGTAAAACTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR-3UTR CAA 90 bp | ACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCTCAATTCACATTGGCCTTaGGGAAAGGGCCTCGAATTA | + |
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Preference number: 3 (lower is better) Translates to: TPVYTVPGLASHCVCCNLNSHWP*GKGLEL Trigger: TAATTCGAGGCCCTTTCCCAAAGGCCAATGTGAATT...GAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR TCA 72 bp | GGCTCACATTCAGGAGGCAGAGACAGGCTGAATCTCTaGGTTCAAGATCAGTTTGGTGTACAGGGTGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: GSHSGGRDRLNL*VQDQFGVQGEF Trigger: AAACTCACCCTGTACACCAAACTGATCTTGAACTCAGAGATTCAGCCTGTCTCTGCCTCCTGAATGTGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| 3UTR TCA 72 bp | AGCTTAGTGGCTCACATTCAGGAGGCAGAGACAGGCTaGATCTCTGAGTTCAAGATCAGTTTGGTGTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLVAHIQEAETG*ISEFKISLVYR Trigger: CCTGTACACCAAACTGATCTTGAACTCAGAGATTCAGCCTGTCTCTGCCTCCTGAATGTGAGCCACTAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR TCA 72 bp | ACACTTGCTACATTTCCTTGGTGCATGTGCGGGAAGTaGCAGACCCATTTGCAGGAGTTGGTTCTCCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TLATFPWCMCGK*QTHLQELVLLE Trigger: TTCAAGGAGAACCAACTCCTGCAAATGGGTCTGTCACTTCCCGCACATGCACCAAGGAAATGTAGCAAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR GCA 72 bp | AGTCCTGGCACACTGGGAATGTGCACTGTTGGGTACTaGAAACAGTATACAATAAGAACTGAAGCTGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SPGTLGMCTVGY*KQYTIRTEAVG Trigger: GCCCACAGCTTCAGTTCTTATTGTATACTGTTTGCAGTACCCAACAGTGCACATTCCCAGTGTGCCAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CCA 72 bp | ACAGGGTTCTTTGATTTGAGGAGTTTGATGGTAGCTTaGGCTACAGAGCTTAGTGGCTCACATTCAGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TGFFDLRSLMVA*ATELSGSHSGG Trigger: GCCTCCTGAATGTGAGCCACTAAGCTCTGTAGCCCAAGCTACCATCAAACTCCTCAAATCAAAGAACCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCTCTCGCCATCAGAATGGTaGTTTGCTAGAAGTGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TPVYTVPGLASHCVCCNLSPSEW*FARSVL Trigger: CAAAACACTTCTAGCAAACAACCATTCTGATGGCGA...GAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTAAGGCTTGTGACTAAAGCTGGCCTTGATTTTGTAGCAGTCTTCCATCCCAGGATTTACAGAGACTaGGTTGTGGAAAGATCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GVRLVTKAGLDFVAVFHPRIYRD*VVERSL Trigger: CAGGGATCTTTCCACAACCAAGTCTCTGTAAATCCT...GGGATGGAAGACTGCTACAAAATCAAGGCCAGCTTTAGTCACAAGCCTTACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAGATCAGTTTGGTGTACAGGGTGAGTTTCAGGACAGCCAGGGCTACACAGACCCTCTTTCTTAGATaGACCTACAAGTCTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: FKISLVYRVSFRTARATQTLFLR*TYKSQN Trigger: GTTCTGAGACTTGTAGGTCAATCTAAGAAAGAGGGT...CTGTGTAGCCCTGGCTGTCCTGAAACTCACCCTGTACACCAAACTGATCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR GCA 72 bp | TGCCTATGCCTCCTGAGTGATGGATTAAAGACGATATaGCACCTAGCCTGGCTTGGTTTTGGTTTGGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: CLCLLSDGLKTI*HLAWLGFGLVC Trigger: ACAAACCAAACCAAAACCAAGCCAGGCTAGGTGGCATATCGTCTTTAATCCATCACTCAGGAGGCATAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTAAGGCTTGTGACTAAAGCTGGCCTTGATTTTGTAGCAGTCTTCCATCCCCAGAGAAATCCTGTCTaGAAAAACAAAAGAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GVRLVTKAGLDFVAVFHPQRNPV*KNKRSQ Trigger: CTGGCTTCTTTTGTTTTTCAAGACAGGATTTCTCTG...GGGATGGAAGACTGCTACAAAATCAAGGCCAGCTTTAGTCACAAGCCTTACCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CCA 72 bp | CTGAGTGATGGATTAAAGACGATATGCCACCTAGCCTaGCTTGGTTTTGGTTTGGTTTGTAAACAGAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSDGLKTICHLA*LGFGLVCKQSL Trigger: CAGACTCTGTTTACAAACCAAACCAAAACCAAGCCAGGCTAGGTGGCATATCGTCTTTAATCCATCACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CCA 72 bp | CATGACATGAAATGCACAAATGGACTGAATTCACATTaGCCTTTGGGAAAGGGCCTCGAATTAGTCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HDMKCTNGLNSH*PLGKGLELVSK Trigger: TTTGCTGACTAATTCGAGGCCCTTTCCCAAAGGCCAATGTGAATTCAGTCCATTTGTGCATTTCATGTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CCA 72 bp | ACATCTAGTAGAAGCACTCTAGGGTCGCCATCAGAATaGTTGTTTGCTAGAAGTGTTTTGACCTTGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSSRSTLGSPSE*LFARSVLTLKK Trigger: TTTCTTCAAGGTCAAAACACTTCTAGCAAACAACCATTCTGATGGCGACCCTAGAGTGCTTCTACTAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR TCA 72 bp | ACCTACAAGTCTCAGAACACTGACAAACCAGGACTGTaGAATTCTCCCACTCTCCATTTTAAAATTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TYKSQNTDKPGL*NSPTLHFKICF Trigger: AAAACAAATTTTAAAATGGAGAGTGGGAGAATTTCACAGTCCTGGTTTGTCAGTGTTCTGAGACTTGTAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTTCATGGCAGGGCTTGTTACCCTGGGGCTTCTCAGGGAAGAGGCAGCAGGCACCAGCAGCACATaGCCCCACTCCAGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WPFMAGLVTLGLLREEAAGTSST*PHSRGL Trigger: CAGCCCCCTGGAGTGGGGTCATGTGCTGCTGGTGCC...TGCTGCCTCTTCCCTGAGAAGCCCCAGGGTAACAAGCCCTGCCATGAAGGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR TCA 90 bp | ATATTGAGTCCACAGAGCCTGGATCTCCCTGTAAGGCCATATTTCACCCTGGAGCGTTGGGGAAGCCCCTaGGCAGGTGCAGGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILSPQSLDLPVRPYFTLERWGSP*AGAGTS Trigger: GCTGGTGCCTGCACCTGCTCAGGGGCTTCCCCAACG...CTCCAGGGTGAAATATGGCCTTACAGGGAGATCCAGGCTCTGTGGACTCAATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCCTTCATGGCAGGGCTTGTTACCCTGGGGCTTCTCAGGGAAGAGGCAGCACCTTTATTCCAAAGCTaGACTTCCGGGCCCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WPFMAGLVTLGLLREEAAPLFQS*TSGPTE Trigger: TTCTGTGGGCCCGGAAGTCCAGCTTTGGAATAAAGG...TGCTGCCTCTTCCCTGAGAAGCCCCAGGGTAACAAGCCCTGCCATGAAGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTGAATCCCTGGGCCACTaGACTTCCTTGCCAACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISLRSSGWPGTHHANRLAESLGH*TSLPTR Trigger: TCTCGTTGGCAAGGAAGTTCAGTGGCCCAGGGATTC...AGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR TCA 90 bp | AGGCAGATTCCTGAGTTCGAGGTCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCAGACAATCCTGAATaGGGGCCACTGCAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQIPEFEVSLVYRVSSRTADNPE*GPLQLP Trigger: AGGCAGCTGCAGTGGCCCTCATTCAGGATTGTCTGC...TGTCCTGGAACTCACTCTGTAGACCAGGCTGACCTCGAACTCAGGAATCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR GCA 90 bp | AGGCAGATTCCTGAGTTCGAGGTCAGCCTGGTCTACAGAGTGAGTTCCAGGACAAGGACGTCGTCCTCTTaGTTTGGAGTGGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQIPEFEVSLVYRVSSRTRTSSS*FGVAGP Trigger: AGGCCCAGCCACTCCAAAGCAAGAGGACGACGTCCT...TGTCCTGGAACTCACTCTGTAGACCAGGCTGACCTCGAACTCAGGAATCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTACCCTGAAGCCTGGGTaGAAGCTCAGTAGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLRSSGWPGTHHANRLATLKPG*KLSRTA Trigger: AGCTGTCCTACTGAGCTTGCACCCAGGCTTCAGGGT...AGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTCTGAATGAGGGCCACTaGAGCTGCCTCTGTCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISLRSSGWPGTHHANRLALNEGH*SCLCQA Trigger: AGCTTGACAGAGGCAGCTGCAGTGGCCCTCATTCAG...AGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCTCTCCCTCCACAGGCAGTaGGTGGGCCAGGTAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPVYTVPGLASHCVCCNLSLHRQ*VGQVVA Trigger: TGCTACTACCTGGCCCACCCACTGCCTGTGGAGGGA...GAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR TCA 90 bp | TGTAAGCCATCAGAGCAGAGGCTGATGGTTCACACCAAAGGCGAAGTCCAGAGACGTACCTCACCTGCCTaGGTTTCAGGCAGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: CKPSEQRLMVHTKGEVQRRTSPA*VSGSRQ Trigger: TTGTCTGCTGCCTGAAACTCAGGCAGGTGAGGTACG...TCTCTGGACTTCGCCTTTGGTGTGAACCATCAGCCTCTGCTCTGATGGCTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR GCA 90 bp | AGAGACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAATGCCCGTACCTCACCTaGCTGAGTTTCAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSSIHCTRSGISLRVLQCPYLT*LSFRQQ Trigger: CTGCTGCCTGAAACTCAGGCAGGTGAGGTACGGGCA...TTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTTTGCTTTGGAGTGGCTaGGCCTTTAGGTTCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLRSSGWPGTHHANRLALLWSG*AFRFPL Trigger: CAAAGGGAACCTAAAGGCCCAGCCACTCCAAAGCAA...AGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CAA 72 bp | GCATGTAGGAGCCAGAGGCAGTTGGATCTCTGTGGGTaGGAGGCCAGTCAAAGCTACATAGTGAGACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACRSQRQLDLCG*EASQSYIVRPC Trigger: ACAAGGTCTCACTATGTAGCTTTGACTGGCCTCCAACCCACAGAGATCCAACTGCCTCTGGCTCCTACATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR TCA 90 bp | TTCAAGATCAGTTTGGTGTACAGGGTGAGTTTCAGGACAGCCAGGGCTACACAGAGTCCTGTGATGTTTTaGCAGGGAGGTGGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKISLVYRVSFRTARATQSPVMF*QGGGQP Trigger: TGGCTGGCCACCTCCCTGTCAAAACATCACAGGACT...CTGTGTAGCCCTGGCTGTCCTGAAACTCACCCTGTACACCAAACTGATCTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCTCTTCCAAATCCGGCCCTaGCCCACTGGTGTAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPVYTVPGLASHCVCCNLFQIRP*PTGVKE Trigger: CTCTTTTACACCAGTGGGCCAGGGCCGGATTTGGAA...GAGGTTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR TCA 90 bp | AGAGACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAAGCTGCTGAAGTCCTGTaGTGTTTTGACAGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDSSIHCTRSGISLRVLQAAEVL*CFDREV Trigger: CACCTCCCTGTCAAAACATCACAGGACTTCAGCAGC...TTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR TCA 90 bp | ACAAATGGACTGAATTCACATTGGCCTTTGGGAAAGGGCCTCGAATTAGTCAGCGGCAGCAGACAATCCTaGATGAGGGCCACTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNGLNSHWPLGKGLELVSGSRQS*MRATAA Trigger: AGCTGCAGTGGCCCTCATTCAGGATTGTCTGCTGCC...GCTGACTAATTCGAGGCCCTTTCCCAAAGGCCAATGTGAATTCAGTCCATTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR CCA 90 bp | ACAAATGGACTGAATTCACATTGGCCTTTGGGAAAGGGCCTCGAATTAGTCAGCCCGGCCCTGGCCCACTaGTGTAAAAGAGAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TNGLNSHWPLGKGLELVSPALAH*CKRESQ Trigger: CTGGCTTTCTCTTTTACACCAGTGGGCCAGGGCCGG...GCTGACTAATTCGAGGCCCTTTCCCAAAGGCCAATGTGAATTCAGTCCATTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CAA 72 bp | AGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTaGGCTTCAAACTTTCATAGAGTTCCGACTGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGWPGTHHANR*ASNFHRVPTAY Trigger: ATAGGCAGTCGGAACTCTATGAAAGTTTGAAGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR GCA 90 bp | CTGGTCTACAGAGTTCTAGTACAGGCAGAGAAATCCTGTCTTGAAAAACAAAAGTGGGGTCTAGGGGTGTaGTTGGCGCTCCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVYRVLVQAEKSCLEKQKWGLGV*LALPPQ Trigger: CTGTGGAGGGAGCGCCAAGCACACCCCTAGACCCCA...CTTTTGTTTTTCAAGACAGGATTTCTCTGCCTGTACTAGAACTCTGTAGACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR CCA 90 bp | AGAGACTCCAGTATACACTGTACCAGGTCTGGCATCTCATTGCGTGTGCTGCAACCAATCCTCTGGATCTaGAGGCAGCAGATAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDSSIHCTRSGISLRVLQPILWI*RQQIGS Trigger: ACTTCCTATCTGCTGCCTCCAGATCCAGAGGATTGG...TTGCAGCACACGCAATGAGATGCCAGACCTGGTACAGTGTATACTGGAGTCTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR CCA 90 bp | TGTAAGCCATCAGAGCAGAGGCTGATGGTTCACACCAAAGGCGAAGTCCAGAGATTTCTCCCAATCCTCTaGATCTGGAGGCAGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: CKPSEQRLMVHTKGEVQRFLPIL*IWRQQI Trigger: TATCTGCTGCCTCCAGATCCAGAGGATTGGGAGAAA...TCTCTGGACTTCGCCTTTGGTGTGAACCATCAGCCTCTGCTCTGATGGCTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CAA 72 bp | ATGCCTTTAATCTTAGCATGTAGGAGCCAGAGGCAGTaGGATCTCTGTGGGTTGGAGGCCAGTCAAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: MPLILACRSQRQ*DLCGLEASQSY Trigger: GTAGCTTTGACTGGCCTCCAACCCACAGAGATCCAACTGCCTCTGGCTCCTACATGCTAAGATTAAAGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR TCA 90 bp | CTGGTCTACAGAGTTCTAGTACAGGCAGAGAAATCCTGTCTTGAAAAACAAAAGGTCCACGGCACTAGGTaGATCCCTGGGCCACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVYRVLVQAEKSCLEKQKVHGTR*IPGPLN Trigger: GTTCAGTGGCCCAGGGATTCACCTAGTGCCGTGGAC...CTTTTGTTTTTCAAGACAGGATTTCTCTGCCTGTACTAGAACTCTGTAGACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR GCA 90 bp | GGGGTAAGGCTTGTGACTAAAGCTGGCCTTGATTTTGTAGCAGTCTTCCATCCCAGACAAAGTCCGGGATaGCTTGTTTCTCCCAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVRLVTKAGLDFVAVFHPRQSPG*LVSPNP Trigger: AGGATTGGGAGAAACAAGGCATCCCGGACTTTGTCT...GGGATGGAAGACTGCTACAAAATCAAGGCCAGCTTTAGTCACAAGCCTTACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR CCA 90 bp | CTGGTCTACAGAGTTCTAGTACAGGCAGAGAAATCCTGTCTTGAAAAACAAAAGGTTTTGACAGGGAGGTaGCCAGCCAGCTCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVYRVLVQAEKSCLEKQKVLTGR*PASSQR Trigger: CCTCTGTGAGCTGGCTGGCCACCTCCCTGTCAAAAC...CTTTTGTTTTTCAAGACAGGATTTCTCTGCCTGTACTAGAACTCTGTAGACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CAA 72 bp | GCCATATTTCACCCTGGAGTGACCCTCTTTCTTAGATaGACCTACAAGTCTCAGAACACTGACAAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AIFHPGVTLFLR*TYKSQNTDKPG Trigger: TCCTGGTTTGTCAGTGTTCTGAGACTTGTAGGTCAATCTAAGAAAGAGGGTCACTCCAGGGTGAAATATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CAA 72 bp | CAGGAAACTAAAACAGGGTTCTTTGATTTGAGGAGTTaGATGGTAGCTTGGGCTACAGAGCTTAGTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QETKTGFFDLRS*MVAWATELSGS Trigger: TGAGCCACTAAGCTCTGTAGCCCAAGCTACCATCAAACTCCTCAAATCAAAGAACCCTGTTTTAGTTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CAA 72 bp | TGGGTTGGAGGCCAGTCAAAGCTACATAGTGAGACCTaGTCTCTCATAACAAGCAGAACACTTGCTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: WVGGQSKLHSET*SLITSRTLATF Trigger: AAATGTAGCAAGTGTTCTGCTTGTTATGAGAGACAAGGTCTCACTATGTAGCTTTGACTGGCCTCCAACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CAA 72 bp | ATGAGACTTTTTAAAACTTCCAGGATTTACAGAGACTaGGTTGTGGAAAGATCCCTGAGGGCCACCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: MRLFKTSRIYRD*VVERSLRATNC Trigger: ACAGTTGGTGGCCCTCAGGGATCTTTCCACAACCAAGTCTCTGTAAATCCTGGAAGTTTTAAAAAGTCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CAA 72 bp | ATGAAATGCACAAATGGACTGAATTCACATTGGCCTTaGGGAAAGGGCCTCGAATTAGTCAGCAAAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MKCTNGLNSHWP*GKGLELVSKEN Trigger: GTTTTCTTTGCTGACTAATTCGAGGCCCTTTCCCAAAGGCCAATGTGAATTCAGTCCATTTGTGCATTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| 3UTR CAA 72 bp | AACCCACAACTTTTGTGTAACAATCAATATATGCTTTaGGGTGGCCATTTGATATTGAGTCCACAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NPQLLCNNQYML*GGHLILSPQSL Trigger: CAGGCTCTGTGGACTCAATATCAAATGGCCACCCAAAAGCATATATTGATTGTTACACAAAAGTTGTGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS CCA 90 bp | GAAAGCCAGGAGCCGGCAGGGCCTGCAGCAGATGTATACAACCTTTaGGGTCTAGGGGTGTGCTTGGCGCTCCCTCCACAGGCAGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ESQEPAGPAADVYNL*GLGVCLALPPQAVG Trigger: ACCCACTGCCTGTGGAGGGAGCGCCAAGCACACCCCTAGACCCCAAAGGTTGTATACATCTGCTGCAGGCCCTGCCGGCTCCTGGCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS GCA 90 bp | CTCTTCCTGAGCCATCAGGGCTACCAGCGCTGCCCGTACCTCACCTaGCTGAGTTTCAGGCAGCAGACAATCCTGAATGAGGGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFLSHQGYQRCPYLT*LSFRQQTILNEGHC Trigger: GCAGTGGCCCTCATTCAGGATTGTCTGCTGCCTGAAACTCAGGCAGGTGAGGTACGGGCAGCGCTGGTAGCCCTGATGGCTCAGGAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTTGGTCTAGGGGTGTGCTaGGCGCTCCCTCCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLCVALAGLGLTMQTGWLGLGVC*ALPPQA Trigger: TGCCTGTGGAGGGAGCGCCAAGCACACCCCTAGACC...AAGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS-3UTR CAA 90 bp | TTTCTCTGCGTAGCTCTGGCTGGCCTGGGACTCACCATGCAAACAGGTTGGCTTTCCAGGGGGCTGACATaGATCACCACAAGGACGTCG | + |
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Preference number: 5 (lower is better) Translates to: FLCVALAGLGLTMQTGWLSRGLT*ITTRTS Trigger: CGACGTCCTTGTGGTGATCAATGTCAGCCCCCTGGA...AAGCCAACCTGTTTGCATGGTGAGTCCCAGGCCAGCCAGAGCTACGCAGAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS-3UTR CAA 90 bp | TGTAAGCCATCAGAGCAGAGGCTGATGGTTCACACCAAAGGCGAAGTCCAGAGAAGGCCTCCCAGGCTGTaGAAGCCGACCCTGAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: CKPSEQRLMVHTKGEVQRRPPRL*KPTLKP Trigger: AGGCTTCAGGGTCGGCTTCAACAGCCTGGGAGGCCT...TCTCTGGACTTCGCCTTTGGTGTGAACCATCAGCCTCTGCTCTGATGGCTTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS GCA 90 bp | CACTCCAGGGGGCTGACATTGATCACCACAAGGACGTCGTCCTCTTaGTTTGGAGTGGCTGGGCCTTTAGGTTCCCTTTGCATCCGGAAA | + |
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Preference number: 5 (lower is better) Translates to: HSRGLTLITTRTSSS*FGVAGPLGSLCIRK Trigger: TTTCCGGATGCAAAGGGAACCTAAAGGCCCAGCCACTCCAAAGCAAGAGGACGACGTCCTTGTGGTGATCAATGTCAGCCCCCTGGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CCA 90 bp | CAGGGGGCTGACATTGATCACCACAAGGACGTCGTCCTCTTGCTTTaGAGTGGCTGGGCCTTTAGGTTCCCTTTGCATCCGGAAAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: QGADIDHHKDVVLLL*SGWAFRFPLHPEKD Trigger: GTCCTTTTCCGGATGCAAAGGGAACCTAAAGGCCCAGCCACTCCAAAGCAAGAGGACGACGTCCTTGTGGTGATCAATGTCAGCCCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS GCA 90 bp | CTTCCTTGCCAACGAGATCCTCCTGGCCATAGACAAAGTCCGGGATaGCTTGTTTCTCCCAATCCTCTGGATCTGGAGGCAGCAGATAGG | + |
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Preference number: 5 (lower is better) Translates to: LPCQRDPPGHRQSPG*LVSPNPLDLEAADR Trigger: CCTATCTGCTGCCTCCAGATCCAGAGGATTGGGAGAAACAAGGCATCCCGGACTTTGTCTATGGCCAGGAGGATCTCGTTGGCAAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CCA 90 bp | GACATTGATCACCACAAGGACGTCGTCCTCTTGCTTTGGAGTGGCTaGGCCTTTAGGTTCCCTTTGCATCCGGAAAAGGACTTCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DIDHHKDVVLLLWSG*AFRFPLHPEKDFSR Trigger: CCTGGAGAAGTCCTTTTCCGGATGCAAAGGGAACCTAAAGGCCCAGCCACTCCAAAGCAAGAGGACGACGTCCTTGTGGTGATCAATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS-3UTR CAA 90 bp | AGGCAGATTCCTGAGTTCGAGGTCAGCCTGGTCTACAGAGTGAGTTCCAGGACAAAAGTCCGGGATGCCTaGTTTCTCCCAATCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: RQIPEFEVSLVYRVSSRTKVRDA*FLPILW Trigger: CCAGAGGATTGGGAGAAACAAGGCATCCCGGACTTT...TGTCCTGGAACTCACTCTGTAGACCAGGCTGACCTCGAACTCAGGAATCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS GCA 90 bp | ACGTCGTCCTCTTGCTTTGGAGTGGCTGGGCCTTTAGGTTCCCTTTaGATCCGGAAAAGGACTTCTCCAGGTCGAATTTTATTGAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: TSSSCFGVAGPLGSL*IRKRTSPGRILLKL Trigger: TAACTTCAATAAAATTCGACCTGGAGAAGTCCTTTTCCGGATGCAAAGGGAACCTAAAGGCCCAGCCACTCCAAAGCAAGAGGACGACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS-3UTR CAA 90 bp | GGGGTAAGGCTTGTGACTAAAGCTGGCCTTGATTTTGTAGCAGTCTTCCATCCCCCAGGTCGAATTTTATaGAAGTTAAACTGTTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: GVRLVTKAGLDFVAVFHPPGRIL*KLNCSG Trigger: CCCGGAACAGTTTAACTTCAATAAAATTCGACCTGG...GGGATGGAAGACTGCTACAAAATCAAGGCCAGCTTTAGTCACAAGCCTTACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CAA 90 bp | AGAAAGCCAGGAGCCGGCAGGGCCTGCAGCAGATGTATACAACCTTaGGGGTCTAGGGGTGTGCTTGGCGCTCCCTCCACAGGCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RKPGAGRACSRCIQP*GSRGVLGAPSTGSG Trigger: CCCACTGCCTGTGGAGGGAGCGCCAAGCACACCCCTAGACCCCAAAGGTTGTATACATCTGCTGCAGGCCCTGCCGGCTCCTGGCTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CAA 90 bp | GGGCCTGCAGCAGATGTATACAACCTTTGGGGTCTAGGGGTGTGCTaGGCGCTCCCTCCACAGGCAGTGGGTGGGCCAGGTAGTAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: GPAADVYNLWGLGVC*ALPPQAVGGPGSSN Trigger: ATTGCTACTACCTGGCCCACCCACTGCCTGTGGAGGGAGCGCCAAGCACACCCCTAGACCCCAAAGGTTGTATACATCTGCTGCAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS TCA 72 bp | GGGCGCCTCCTCTGTATCCCTCGCTCTATATTCAGCTaGGCTACAAACCCCACGGAACCGGGGAGGATTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRLLCIPRSIFS*ATNPTEPGRIW Trigger: CCAAATCCTCCCCGGTTCCGTGGGGTTTGTAGCTCAGCTGAATATAGAGCGAGGGATACAGAGGAGGCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS GCA 72 bp | GCTACAAACCCCACGGAACCGGGGAGGATTTGGGTCTaGAGATCTTCTAGGCGGTACCGAAACAGGCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: ATNPTEPGRIWV*RSSRRYRNRPS Trigger: ACTGGGCCTGTTTCGGTACCGCCTAGAAGATCTGCAGACCCAAATCCTCCCCGGTTCCGTGGGGTTTGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CAA 90 bp | CCACTCCAGGGGGCTGACATTGATCACCACAAGGACGTCGTCCTCTaGCTTTGGAGTGGCTGGGCCTTTAGGTTCCCTTTGCATCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: PLQGADIDHHKDVVL*LWSGWAFRFPLHPE Trigger: TTCCGGATGCAAAGGGAACCTAAAGGCCCAGCCACTCCAAAGCAAGAGGACGACGTCCTTGTGGTGATCAATGTCAGCCCCCTGGAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS TCA 72 bp | CACTGCAGCTGCCTCTGTCAAGCTGCTGAAGTCCTGTaGTGTTTTGACAGGGAGGTGGCCAGCCAGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: HCSCLCQAAEVL*CFDREVASQLT Trigger: TGTGAGCTGGCTGGCCACCTCCCTGTCAAAACATCACAGGACTTCAGCAGCTTGACAGAGGCAGCTGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS GCA 72 bp | GGGCTGACATTGATCACCACAAGGACGTCGTCCTCTTaGTTTGGAGTGGCTGGGCCTTTAGGTTCCCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GLTLITTRTSSS*FGVAGPLGSLC Trigger: GCAAAGGGAACCTAAAGGCCCAGCCACTCCAAAGCAAGAGGACGACGTCCTTGTGGTGATCAATGTCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CCA 72 bp | CACCACAAGGACGTCGTCCTCTTGCTTTGGAGTGGCTaGGCCTTTAGGTTCCCTTTGCATCCGGAAAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: HHKDVVLLLWSG*AFRFPLHPEKD Trigger: GTCCTTTTCCGGATGCAAAGGGAACCTAAAGGCCCAGCCACTCCAAAGCAAGAGGACGACGTCCTTGTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CAA 72 bp | GAGATCCTCCTGGCCATAGACAAAGTCCGGGATGCCTaGTTTCTCCCAATCCTCTGGATCTGGAGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: EILLAIDKVRDA*FLPILWIWRQQ Trigger: CTGCTGCCTCCAGATCCAGAGGATTGGGAGAAACAAGGCATCCCGGACTTTGTCTATGGCCAGGAGGATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CAA 72 bp | GGGGCTGACATTGATCACCACAAGGACGTCGTCCTCTaGCTTTGGAGTGGCTGGGCCTTTAGGTTCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: GADIDHHKDVVL*LWSGWAFRFPL Trigger: CAAAGGGAACCTAAAGGCCCAGCCACTCCAAAGCAAGAGGACGACGTCCTTGTGGTGATCAATGTCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CCA 72 bp | TCCGGGTCAAACTCCTGCCTCACACTTCTGATATTCTaGGGGCGCCTCCTCTGTATCCCTCGCTCTATATTC | + |
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Preference number: 6 (lower is better) Translates to: SGSNSCLTLLIF*GRLLCIPRSIF Trigger: GAATATAGAGCGAGGGATACAGAGGAGGCGCCCCCAGAATATCAGAAGTGTGAGGCAGGAGTTTGACCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CAA 90 bp | CTTGCCAACGAGATCCTCCTGGCCATAGACAAAGTCCGGGATGCCTaGTTTCTCCCAATCCTCTGGATCTGGAGGCAGCAGATAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LANEILLAIDKVRDA*FLPILWIWRQQIGS Trigger: ACTTCCTATCTGCTGCCTCCAGATCCAGAGGATTGGGAGAAACAAGGCATCCCGGACTTTGTCTATGGCCAGGAGGATCTCGTTGGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CCA 72 bp | GTCCGGGATGCCTTGTTTCTCCCAATCCTCTGGATCTaGAGGCAGCAGATAGGAAGTCTCCTGCAAATGATG | + |
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Preference number: 6 (lower is better) Translates to: VRDALFLPILWI*RQQIGSLLQMM Trigger: CATCATTTGCAGGAGACTTCCTATCTGCTGCCTCCAGATCCAGAGGATTGGGAGAAACAAGGCATCCCGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CCA 72 bp | GACAAAGTCCGGGATGCCTTGTTTCTCCCAATCCTCTaGATCTGGAGGCAGCAGATAGGAAGTCTCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: DKVRDALFLPIL*IWRQQIGSLLQ Trigger: TTGCAGGAGACTTCCTATCTGCTGCCTCCAGATCCAGAGGATTGGGAGAAACAAGGCATCCCGGACTTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CAA 90 bp | GACGTCGTCCTCTTGCTTTGGAGTGGCTGGGCCTTTAGGTTCCCTTaGCATCCGGAAAAGGACTTCTCCAGGTCGAATTTTATTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: DVVLLLWSGWAFRFP*HPEKDFSRSNFIEV Trigger: AACTTCAATAAAATTCGACCTGGAGAAGTCCTTTTCCGGATGCAAAGGGAACCTAAAGGCCCAGCCACTCCAAAGCAAGAGGACGACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CAA 90 bp | GGTTCCCTTTGCATCCGGAAAAGGACTTCTCCAGGTCGAATTTTATaGAAGTTAAACTGTTCCGGGTCAAACTCCTGCCTCACACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GSLCIRKRTSPGRIL*KLNCSGSNSCLTLL Trigger: CAGAAGTGTGAGGCAGGAGTTTGACCCGGAACAGTTTAACTTCAATAAAATTCGACCTGGAGAAGTCCTTTTCCGGATGCAAAGGGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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| CDS CAA 72 bp | TGCATCCGGAAAAGGACTTCTCCAGGTCGAATTTTATaGAAGTTAAACTGTTCCGGGTCAAACTCCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: CIRKRTSPGRIL*KLNCSGSNSCL Trigger: GAGGCAGGAGTTTGACCCGGAACAGTTTAACTTCAATAAAATTCGACCTGGAGAAGTCCTTTTCCGGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062915.9 |
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