Pregenerated sensors for GDPD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035582Ensembl transcript IDs: ENSMUST00000041860.13, ENSMUST00000170049.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCATGTCTATGCCACCTCTTCTTCCCCAACTTAGGAAAATGTCACTaGTGCACCATCCCACAGTCTATGAGCCTAGGCGACCACAGAGGG | + |
|
Preference number: 1 (lower is better) Translates to: SCLCHLFFPNLGKCH*CTIPQSMSLGDHRG Trigger: CCCTCTGTGGTCGCCTAGGCTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAGAGGTGGCATAGACATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR GCA 90 bp | TCACTGGAGGAAATCTGGTGGTTTGAGAGCCTCATGTGTCAGGACTaGCGTGAAATGGAGAGTTTCAATATCTCAGAAGGCTGGAGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: SLEEIWWFESLMCQD*REMESFNISEGWSL Trigger: CAGACTCCAGCCTTCTGAGATATTGAAACTCTCCATTTCACGGCAGTCCTGACACATGAGGCTCTCAAACCACCAGATTTCCTCCAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR CCA 90 bp | AAATCTGGTGGTTTGAGAGCCTCATGTGTCAGGACTGCCGTGAAATaGAGAGTTTCAATATCTCAGAAGGCTGGAGTCTGGCCAGAGTTT | + |
|
Preference number: 1 (lower is better) Translates to: KSGGLRASCVRTAVK*RVSISQKAGVWPEF Trigger: AAACTCTGGCCAGACTCCAGCCTTCTGAGATATTGAAACTCTCCATTTCACGGCAGTCCTGACACATGAGGCTCTCAAACCACCAGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR CCA 90 bp | ACTAATAACTCCCTTGGGGTGATACTGGTGGCTTGGTATTCTTCTTaGCAAGTCCTAGTAGAACGATTCTCTCACTGGAGGAAATCTGGT | + |
|
Preference number: 1 (lower is better) Translates to: TNNSLGVILVAWYSS*QVLVERFSHWRKSG Trigger: ACCAGATTTCCTCCAGTGAGAGAATCGTTCTACTAGGACTTGCCAAGAAGAATACCAAGCCACCAGTATCACCCCAAGGGAGTTATTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR TCA 90 bp | CAAGGTGAGGCTAAATTTTCTCCAGTGGGAGAAGGAAGACATAATTaGGGAGGAATATGCCATGTTAACAGATTCCTGGGGAGGGATTTA | + |
|
Preference number: 1 (lower is better) Translates to: QGEAKFSPVGEGRHN*GGICHVNRFLGRDL Trigger: TAAATCCCTCCCCAGGAATCTGTTAACATGGCATATTCCTCCTCAATTATGTCTTCCTTCTCCCACTGGAGAAAATTTAGCCTCACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR GCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACCTGGGTACCACTGTTTaGCCTGGCCTGTCTCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VGCELCPGSCLCHLFFPNLGTTV*PGLSPE Trigger: CTCAGGAGACAGGCCAGGGCAAACAGTGGTACCCAG...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACGGGCAGAGAACACACTaGCTTCCTGAGAGGTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: VGCELCPGSCLCHLFFPNGQRTH*LPERLP Trigger: AGGCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCC...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCAGGACTGCCGTGAAATaGAGAGTTTCAATATCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: EPRRPQRGREHTGFLRGCRTAVK*RVSISQ Trigger: CTGAGATATTGAAACTCTCCATTTCACGGCAGTCCT...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCCTTTGGGGTTACTGGTaGTATGACACTAATAACTCC | + |
|
Preference number: 2 (lower is better) Translates to: EPRRPQRGREHTGFLRGCLWGYW*YDTNNS Trigger: GGAGTTATTAGTGTCATACCACCAGTAACCCCAAAG...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCCTTAGGACACTTTGGTaGTTCAAGGTTCCTTTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: EPRRPQRGREHTGFLRGCLRTLW*FKVPFG Trigger: TCCAAAAGGAACCTTGAACCACCAAAGTGTCCTAAG...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCTCCTTTTGGAAGCTTTaGCAGAGCATTGTCATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: EPRRPQRGREHTGFLRGCSFWKL*QSIVIF Trigger: AAAGATGACAATGCTCTGTCAAAGCTTCCAAAAGGA...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGTGGCGTGAGCCTTCTTaGCCACACCCTACCATCACC | + |
|
Preference number: 2 (lower is better) Translates to: LLPQLRKMSLLHHPTVYEWREPS*PHPTIT Trigger: GGTGATGGTAGGGTGTGGTCAAGAAGGCTCACGCCA...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACGCCTTTATTATAAGCTaGCATGACTGGACACTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: VGCELCPGSCLCHLFFPNAFIIS*HDWTLL Trigger: AAGGAGTGTCCAGTCATGTCAGCTTATAATAAAGGC...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGGGAAATCTGGTGGTTTaGGAGCCTCATGTGTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLPQLRKMSLLHHPTVYEGNLVV*EPHVSG Trigger: TCCTGACACATGAGGCTCTCAAACCACCAGATTTCC...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGATAACTCCCTTGGGGTaGTACTGGTGGCTTGGTATT | + |
|
Preference number: 2 (lower is better) Translates to: LLPQLRKMSLLHHPTVYEITPLG*YWWLGI Trigger: AATACCAAGCCACCAGTATCACCCCAAGGGAGTTAT...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACCTAAATTTTCTCCAGTaGGAGAAGGAAGACATAATT | + |
|
Preference number: 2 (lower is better) Translates to: VGCELCPGSCLCHLFFPNLNFLQ*EKEDII Trigger: AATTATGTCTTCCTTCTCCCACTGGAGAAAATTTAG...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGGGCTTCCTGAGAGGTTaGCTTTATTATAAGCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: LLPQLRKMSLLHHPTVYEGFLRG*LYYKLT Trigger: TGTCAGCTTATAATAAAGGCAACCTCTCAGGAAGCC...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGGAAGGAAGACATAATTaGGGAGGAATATGCCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLPQLRKMSLLHHPTVYEEGRHN*GGICHV Trigger: AACATGGCATATTCCTCCTCAATTATGTCTTCCTTC...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGCATTGTCATCTTTGGGGAATCCTTGAGGTATAGTATTCTCTTTGGGGTTCTGGAGGAAATCTGGTaGTTTGAGAGCCTCATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QSIVIFGESLRYSILFGVLEEIW*FESLMC Trigger: ACACATGAGGCTCTCAAACCACCAGATTTCCTCCAG...AACCCCAAAGAGAATACTATACCTCAAGGATTCCCCAAAGATGACAATGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR TCA 72 bp | ATGACTGGGTACCACTGTTTGCCCTGGCCTGTCTCCTaGGGAGCATCCCGTAGAAGAGCTGGGCTAGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: MTGYHCLPWPVS*GASRRRAGLES Trigger: GCTCTCTAGCCCAGCTCTTCTACGGGATGCTCCTCAGGAGACAGGCCAGGGCAAACAGTGGTACCCAGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR GCA 72 bp | AACCCACTGCACACAGATCAGAAAACGAGGGTGGGATaGGAGCTCTGTCCTGGCTCATGTCTATGCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: NPLHTDQKTRVG*ELCPGSCLCHL Trigger: GAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCACCCTCGTTTTCTGATCTGTGTGCAGTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCGGTTCAAGGTTCCTTTaGGAAGCTTTGACAGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: EPRRPQRGREHTGFLRGCGSRFL*EALTEH Trigger: ATGCTCTGTCAAAGCTTCCAAAAGGAACCTTGAACC...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR GCA 72 bp | CACCTCTTCTTCCCCAACTTAGGAAAATGTCACTGCTaGACCATCCCACAGTCTATGAGCCTAGGCGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: HLFFPNLGKCHC*TIPQSMSLGDH Trigger: GTGGTCGCCTAGGCTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR GCA 72 bp | TGCCACCTCTTCTTCCCCAACTTAGGAAAATGTCACTaGTGCACCATCCCACAGTCTATGAGCCTAGGCGAC | + |
|
Preference number: 3 (lower is better) Translates to: CHLFFPNLGKCH*CTIPQSMSLGD Trigger: GTCGCCTAGGCTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAGAGGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR CCA 72 bp | AGATCAGAAAACGAGGGTGGGATGCGAGCTCTGTCCTaGCTCATGTCTATGCCACCTCTTCTTCCCCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: RSENEGGMRALS*LMSMPPLLPQL Trigger: AAGTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCACCCTCGTTTTCTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR GCA 72 bp | CAGGAAGTACAACAGAAGCATAAGATGAGACAGCCCTaGAACCTAGAGAGCACCAGCTCCAGGTCCATGACT | + |
|
Preference number: 3 (lower is better) Translates to: QEVQQKHKMRQP*NLESTSSRSMT Trigger: AGTCATGGACCTGGAGCTGGTGCTCTCTAGGTTGCAGGGCTGTCTCATCTTATGCTTCTGTTGTACTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR CCA 72 bp | GGTTTGAGAGCCTCATGTGTCAGGACTGCCGTGAAATaGAGAGTTTCAATATCTCAGAAGGCTGGAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GLRASCVRTAVK*RVSISQKAGVW Trigger: CCAGACTCCAGCCTTCTGAGATATTGAAACTCTCCATTTCACGGCAGTCCTGACACATGAGGCTCTCAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR CCA 72 bp | TCCCTTGGGGTGATACTGGTGGCTTGGTATTCTTCTTaGCAAGTCCTAGTAGAACGATTCTCTCACTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLGVILVAWYSS*QVLVERFSHWR Trigger: CCTCCAGTGAGAGAATCGTTCTACTAGGACTTGCCAAGAAGAATACCAAGCCACCAGTATCACCCCAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGAGGAACTCTGGTTGTTaGATATTCCCCTTAGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLPQLRKMSLLHHPTVYERNSGC*IFPLGG Trigger: GCCTCCTAAGGGGAATATCAAACAACCAGAGTTCCT...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR TCA 72 bp | GTTACTGGTGGTATGACACTAATAACTCCCTTGGGGTaGTACTGGTGGCTTGGTATTCTTCTTGGCAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VTGGMTLITPLG*YWWLGILLGKS Trigger: GGACTTGCCAAGAAGAATACCAAGCCACCAGTATCACCCCAAGGGAGTTATTAGTGTCATACCACCAGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR CCA 72 bp | TCTTCTTGGCAAGTCCTAGTAGAACGATTCTCTCACTaGAGGAAATCTGGTGGTTTGAGAGCCTCATGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSWQVLVERFSH*RKSGGLRASCV Trigger: GACACATGAGGCTCTCAAACCACCAGATTTCCTCCAGTGAGAGAATCGTTCTACTAGGACTTGCCAAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR TCA 72 bp | GACACTTTGGTGGTTCAAGGTTCCTTTTGGAAGCTTTaGCAGAGCATTGTCATCTTTGGGGAATCCTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: DTLVVQGSFWKL*QSIVIFGESLR Trigger: CCTCAAGGATTCCCCAAAGATGACAATGCTCTGTCAAAGCTTCCAAAAGGAACCTTGAACCACCAAAGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR TCA 72 bp | GGCTTCCTGAGAGGTTGCCTTTATTATAAGCTGACATaGCTGGACACTCCTTCAGCAGGAAGTACAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GFLRGCLYYKLT*LDTPSAGSTTE Trigger: TTCTGTTGTACTTCCTGCTGAAGGAGTGTCCAGTCATGTCAGCTTATAATAAAGGCAACCTCTCAGGAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR TCA 72 bp | AGCTTTGACAGAGCATTGTCATCTTTGGGGAATCCTTaGGGTATAGTATTCTCTTTGGGGTTACTGGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SFDRALSSLGNP*GIVFSLGLLVV Trigger: TACCACCAGTAACCCCAAAGAGAATACTATACCTCAAGGATTCCCCAAAGATGACAATGCTCTGTCAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCAAACGGCCCACGTGCTaGAAACCAGGAGCCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EPRRPQRGREHTGFLRGCKRPTC*KPGAMN Trigger: GTTCATGGCTCCTGGTTTTCAGCACGTGGGCCGTTT...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR GCA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCTGGCGCCAACATGGGTaGACCTCTATGTCCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPRRPQRGREHTGFLRGCWRQHG*TSMSKE Trigger: CTCTTTGGACATAGAGGTGCACCCATGTTGGCGCCA...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCTCTTACTTTAACTTCTaGTTCCAAGCGGGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: EPRRPQRGREHTGFLRGCSYFNF*FQAGHT Trigger: TGTGTGGCCCGCTTGGAATCAGAAGTTAAAGTAAGA...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACGCCGGCATTCAGAGTTaGCAGGAAAGTCCAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGCELCPGSCLCHLFFPNAGIQS*QESPVE Trigger: TTCAACTGGACTTTCCTGTCAACTCTGAATGCCGGC...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR GCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACGTGGGATTGACTGGTTaGCTGCTCTTCTTTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGCELCPGSCLCHLFFPNVGLTG*LLFFCQ Trigger: CTGACAAAAGAAGAGCAGGCAACCAGTCAATCCCAC...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACTTGAAGTTGGAAGTGTaGTTTCCAGCCGCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGCELCPGSCLCHLFFPNLKLEV*FPAADG Trigger: ACCATCAGCGGCTGGAAACCACACTTCCAACTTCAA...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CCA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCGAACATGTAGAATCCTaGTGTCATGAAGAAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EPRRPQRGREHTGFLRGCEHVES*CHEEER Trigger: CCTCTCTTCTTCATGACACCAGGATTCTACATGTTC...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CCA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCGTGATGCAGCATTTGTaGTTGAAGTACTGTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: EPRRPQRGREHTGFLRGCVMQHL*LKYCSI Trigger: GATAGAACAGTACTTCAACCACAAATGCTGCATCAC...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACCACTCAGCACCAAAATaGACCAAAAGAACCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VGCELCPGSCLCHLFFPNHSAPK*TKRTSI Trigger: GATGCTGGTTCTTTTGGTCCATTTTGGTGCTGAGTG...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CCA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCAGAGCTCTTAACCTTTaGAATACATTACACCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPRRPQRGREHTGFLRGCRALNL*NTLHLS Trigger: GGAGAGGTGTAATGTATTCCAAAGGTTAAGAGCTCT...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACAAAGGCATAAAAGAATaGTCAGGAAGGACAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGCELCPGSCLCHLFFPNKGIKE*SGRTVQ Trigger: CTGGACTGTCCTTCCTGATCATTCTTTTATGCCTTT...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGAGACAGCTGTGGGATTaGCTGGTTGCCTGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLRKMSLLHHPTVYERQLWD*LVACSS Trigger: AGAAGAGCAGGCAACCAGTCAATCCCACAGCTGTCT...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACCAAATGAAGACCTTATaGGAAGTGTGCAAGTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGCELCPGSCLCHLFFPNQMKTL*EVCKFS Trigger: ACTAAACTTGCACACTTCTCATAAGGTCTTCATTTG...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGGGACAAAAGTGTTTCTaGGAGGATGTCCTGGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLRKMSLLHHPTVYEGQKCF*EDVLVE Trigger: CTCGACCAGGACATCCTCTCAGAAACACTTTTGTCC...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGAGAGGGCGACTGAGCTaGTTTAGGAGCTCAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLRKMSLLHHPTVYERGRLS*FRSSML Trigger: CAACATTGAGCTCCTAAATCAGCTCAGTCGCCCTCT...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGAGAAGAGAGGGCGACTaGGCTGATTTAGGAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLRKMSLLHHPTVYERREGD*ADLGAQ Trigger: TTGAGCTCCTAAATCAGCTCAGTCGCCCTCTCTTCT...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR GCA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACGTTATAGTCTCTGAATaGAGTAAACCTGAAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGCELCPGSCLCHLFFPNVIVSE*SKPEDA Trigger: TGCATCTTCAGGTTTACTGCATTCAGAGACTATAAC...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGAGCTGTGGGATTGACTaGTTGCCTGCTCTTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLRKMSLLHHPTVYESCGID*LPALLL Trigger: CAAAAGAAGAGCAGGCAACCAGTCAATCCCACAGCT...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGACCTCTGGCTTCTGTTaGGAGGCATCGTTATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLRKMSLLHHPTVYETSGFC*EASLFS Trigger: AGAAAATAACGATGCCTCTCAACAGAAGCCAGAGGT...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CCA 90 bp | CAGAGCATTGTCATCTTTGGGGAATCCTTGAGGTATAGTATTCTCTTTGGGGTTTCTCTGGCGCCAACATaGGTGCACCTCTATGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSIVIFGESLRYSILFGVSLAPT*VHLYVQ Trigger: TTGGACATAGAGGTGCACCCATGTTGGCGCCAGAGA...AACCCCAAAGAGAATACTATACCTCAAGGATTCCCCAAAGATGACAATGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGTCTCAAAGGACATCATaGTATTCTCTGGCGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLRKMSLLHHPTVYESQRTS*YSLAPT Trigger: TGTTGGCGCCAGAGAATACCATGATGTCCTTTGAGA...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGGCTTTAAGAACCATTTaGCGGCATTCAGAGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLRKMSLLHHPTVYEALRTI*RHSELT Trigger: TGTCAACTCTGAATGCCGGCAAATGGTTCTTAAAGC...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| 3UTR CAA 72 bp | GGACACTTTGGTGGTTCAAGGTTCCTTTTGGAAGCTTaGACAGAGCATTGTCATCTTTGGGGAATCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHFGGSRFLLEA*TEHCHLWGILE Trigger: CTCAAGGATTCCCCAAAGATGACAATGCTCTGTCAAAGCTTCCAAAAGGAACCTTGAACCACCAAAGTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR GCA 90 bp | CAGAGCATTGTCATCTTTGGGGAATCCTTGAGGTATAGTATTCTCTTTGGGGTTAAGGGAGCAAAGATCTaGAGTGACAGTCCAGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: QSIVIFGESLRYSILFGVKGAKI*SDSPAI Trigger: GATAGCTGGACTGTCACTGCAGATCTTTGCTCCCTT...AACCCCAAAGAGAATACTATACCTCAAGGATTCCCCAAAGATGACAATGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | CAGAGCATTGTCATCTTTGGGGAATCCTTGAGGTATAGTATTCTCTTTGGGGTTGGTCATAGTCATGCATaGGGAAAGGCACACTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSIVIFGESLRYSILFGVGHSHA*GKAHYQ Trigger: TTGATAGTGTGCCTTTCCTCATGCATGACTATGACC...AACCCCAAAGAGAATACTATACCTCAAGGATTCCCCAAAGATGACAATGCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR TCA 90 bp | CAGAGCATTGTCATCTTTGGGGAATCCTTGAGGTATAGTATTCTCTTTGGGGTTCCAAGAAAAGCCACATaGACATGTAGAATCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSIVIFGESLRYSILFGVPRKAT*TCRILV Trigger: CACCAGGATTCTACATGTTCATGTGGCTTTTCTTGG...AACCCCAAAGAGAATACTATACCTCAAGGATTCCCCAAAGATGACAATGCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGCACAGACAAGATGAATaGTATTACCAGGCACATATA | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLRKMSLLHHPTVYEHRQDE*YYQAHI Trigger: TATATGTGCCTGGTAATAGCATTCATCTTGTCTGTG...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGTTGTCCTTCCAGAAATaGCTTAAAACAGCAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLRKMSLLHHPTVYELSFQK*LKTASK Trigger: CTTACTTGCTGTTTTAAGCCATTTCTGGAAGGACAA...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCCAGACAGCTGTGGGATaGACTGGTTGCCTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EPRRPQRGREHTGFLRGCQTAVG*TGCLLF Trigger: GAAGAGCAGGCAACCAGTCAATCCCACAGCTGTCTG...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCCTCTCTGTATTGCCATaGGCAACTGTAGCAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EPRRPQRGREHTGFLRGCLSVLP*ATVAAS Trigger: ACTGGCTGCTACAGTTGCCAATGGCAATACAGAGAG...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCTCTGTGGTCACAGAGTaGATACTAGAACACCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EPRRPQRGREHTGFLRGCSVVTE*ILEHQA Trigger: GGCCTGGTGTTCTAGTATCAACTCTGTGACCACAGA...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACCCTCTCCTGTATTTCTaGCTCGTAATCTGCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: VGCELCPGSCLCHLFFPNPLLYF*LVICHP Trigger: AGGATGGCAGATTACGAGCAAGAAATACAGGAGAGG...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACTTGCCTGCTCTTCTTTaGTCAGCCTCTGATAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VGCELCPGSCLCHLFFPNLPALL*SASDRG Trigger: ACCTCTATCAGAGGCTGACAAAAGAAGAGCAGGCAA...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | GAGCCTAGGCGACCACAGAGGGGCAGAGAACACACTGGCTTCCTGAGAGGTTGCGATGGTAGAACCTCTTaGATGTTAGTTGTTCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EPRRPQRGREHTGFLRGCDGRTS*MLVVLV Trigger: GACTAGAACAACTAACATCAAAGAGGTTCTACCATC...GCAACCTCTCAGGAAGCCAGTGTGTTCTCTGCCCCTCTGTGGTCGCCTAGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACATGCAGCATTTGTGGTaGAAGTACTGTTCTATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VGCELCPGSCLCHLFFPNMQHLW*KYCSIH Trigger: GTGGATAGAACAGTACTTCAACCACAAATGCTGCAT...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | GTGGGATGCGAGCTCTGTCCTGGCTCATGTCTATGCCACCTCTTCTTCCCCAACAAGAGCCAAGGCTCATaGATAACATACACATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VGCELCPGSCLCHLFFPNKSQGS*ITYTWM Trigger: CATCCATGTGTATGTTATCAATGAGCCTTGGCTCTT...GTTGGGGAAGAAGAGGTGGCATAGACATGAGCCAGGACAGAGCTCGCATCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS GCA 90 bp | ATCATCACAGTTATAAGGCTCAGGTGCACGAAGGGAGCAAAGATCTaGAGTGACAGTCCAGCTATCAGCCACTTGTCCTTCCAGAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: IITVIRLRCTKGAKI*SDSPAISHLSFQKW Trigger: CCATTTCTGGAAGGACAAGTGGCTGATAGCTGGACTGTCACTGCAGATCTTTGCTCCCTTCGTGCACCTGAGCCTTATAACTGTGATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CCA 90 bp | GACCTTTACCACCCTTCGGACAAAAGTGTTTCTGAGAGGATGTCCTaGTCGAGGGCCGAACAGATCAAATATCACAATCTTCTGTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: DLYHPSDKSVSERMS*SRAEQIKYHNLLFP Trigger: CGGGAACAGAAGATTGTGATATTTGATCTGTTCGGCCCTCGACCAGGACATCCTCTCAGAAACACTTTTGTCCGAAGGGTGGTAAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CCA 90 bp | TCCCGTTTTGCAAGTGCCAATAACTCAGACAGCTGTGGGATTGACTaGTTGCCTGCTCTTCTTTTGTCAGCCTCTGATAGAGGTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SRFASANNSDSCGID*LPALLLSASDRGFM Trigger: CATGAAACCTCTATCAGAGGCTGACAAAAGAAGAGCAGGCAACCAGTCAATCCCACAGCTGTCTGAGTTATTGGCACTTGCAAAACGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS TCA 90 bp | TTAAGAACCATTTGCCGGCATTCAGAGTTGACAGGAAAGTCCAGTTaGAGTTGGAAGTGTGGTTTCCAGCCGCTGATGGTAGAACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRTICRHSELTGKSS*SWKCGFQPLMVEPL Trigger: AAGAGGTTCTACCATCAGCGGCTGGAAACCACACTTCCAACTTCAACTGGACTTTCCTGTCAACTCTGAATGCCGGCAAATGGTTCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS GCA 90 bp | GATAGAGGCCAGGAAATTATAATCATCACAGTTATAAGGCTCAGGTaGACGAAGGGAGCAAAGATCTGCAGTGACAGTCCAGCTATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DRGQEIIIITVIRLR*TKGAKICSDSPAIS Trigger: GCTGATAGCTGGACTGTCACTGCAGATCTTTGCTCCCTTCGTGCACCTGAGCCTTATAACTGTGATGATTATAATTTCCTGGCCTCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS GCA 90 bp | GTTTTGCAAGTGCCAATAACTCAGACAGCTGTGGGATTGACTGGTTaGCTGCTCTTCTTTTGTCAGCCTCTGATAGAGGTTTCATGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLQVPITQTAVGLTG*LLFFCQPLIEVSCQ Trigger: TTGGCATGAAACCTCTATCAGAGGCTGACAAAAGAAGAGCAGGCAACCAGTCAATCCCACAGCTGTCTGAGTTATTGGCACTTGCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGTGCTTTAAGAACCATTaGCCGGCATTCAGAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLPQLRKMSLLHHPTVYECFKNH*PAFRVD Trigger: GTCAACTCTGAATGCCGGCAAATGGTTCTTAAAGCA...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | CTTCTTCCCCAACTTAGGAAAATGTCACTGCTGCACCATCCCACAGTCTATGAGTCTTCTGTTCCCGTTTaGCAAGTGCCAATAACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLPQLRKMSLLHHPTVYESSVPV*QVPITQ Trigger: CTGAGTTATTGGCACTTGCAAAACGGGAACAGAAGA...CTCATAGACTGTGGGATGGTGCAGCAGTGACATTTTCCTAAGTTGGGGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | CAGAGCATTGTCATCTTTGGGGAATCCTTGAGGTATAGTATTCTCTTTGGGGTTAAAGTCCAGTTGAAGTaGGAAGTGTGGTTTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSIVIFGESLRYSILFGVKVQLK*EVWFPA Trigger: GGCTGGAAACCACACTTCCAACTTCAACTGGACTTT...AACCCCAAAGAGAATACTATACCTCAAGGATTCCCCAAAGATGACAATGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS TCA 90 bp | AATGTTGTCTGTGGTCACAGAGTTGATACTAGAACACCAGGCCAGTaGGAAGAGCCAAGGCTCATTGATAACATACACATGGATGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NVVCGHRVDTRTPGQ*EEPRLIDNIHMDVD Trigger: ATCTACATCCATGTGTATGTTATCAATGAGCCTTGGCTCTTCTCACTGGCCTGGTGTTCTAGTATCAACTCTGTGACCACAGACAACATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGCATTGTCATCTTTGGGGAATCCTTGAGGTATAGTATTCTCTTTGGGGTTGACAGGAAAGTCCAGTaGAAGTTGGAAGTGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QSIVIFGESLRYSILFGVDRKVQ*KLEVWF Trigger: AAACCACACTTCCAACTTCAACTGGACTTTCCTGTC...AACCCCAAAGAGAATACTATACCTCAAGGATTCCCCAAAGATGACAATGCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS-3UTR CAA 90 bp | CAGAGCATTGTCATCTTTGGGGAATCCTTGAGGTATAGTATTCTCTTTGGGGTTTTTAGGAGCTCAATGTaGTCTGTGGTCACAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSIVIFGESLRYSILFGVFRSSM*SVVTEL Trigger: CAACTCTGTGACCACAGACAACATTGAGCTCCTAAA...AACCCCAAAGAGAATACTATACCTCAAGGATTCCCCAAAGATGACAATGCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS TCA 90 bp | AGTAAGAAGGAGCACAGGACAATGACTAGGCAAATGAAGACCTTATaGGAAGTGTGCAAGTTTAGTTCAATCCTTTCCCAGAGCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SKKEHRTMTRQMKTL*EVCKFSSILSQSNR Trigger: TCTGTTGCTCTGGGAAAGGATTGAACTAAACTTGCACACTTCTCATAAGGTCTTCATTTGCCTAGTCATTGTCCTGTGCTCCTTCTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGCATTGTCATCTTTGGGGAATCCTTGAGGTATAGTATTCTCTTTGGGGTTAAGGTGATGCAGCATTaGTGGTTGAAGTACTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSIVIFGESLRYSILFGVKVMQH*WLKYCS Trigger: AGAACAGTACTTCAACCACAAATGCTGCATCACCTT...AACCCCAAAGAGAATACTATACCTCAAGGATTCCCCAAAGATGACAATGCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041860.13 |
||
| CDS TCA 72 bp | AAGGCTCAGGTGCACGAAGGGAGCAAAGATCTGCAGTaGCAGTCCAGCTATCAGCCACTTGTCCTTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: KAQVHEGSKDLQ*QSSYQPLVLPE Trigger: TTCTGGAAGGACAAGTGGCTGATAGCTGGACTGTCACTGCAGATCTTTGCTCCCTTCGTGCACCTGAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS GCA 72 bp | GTTATAAGGCTCAGGTGCACGAAGGGAGCAAAGATCTaGAGTGACAGTCCAGCTATCAGCCACTTGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VIRLRCTKGAKI*SDSPAISHLSF Trigger: GAAGGACAAGTGGCTGATAGCTGGACTGTCACTGCAGATCTTTGCTCCCTTCGTGCACCTGAGCCTTATAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CAA 72 bp | CCGGCATTCAGAGTTGACAGGAAAGTCCAGTTGAAGTaGGAAGTGTGGTTTCCAGCCGCTGATGGTAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: PAFRVDRKVQLK*EVWFPAADGRT Trigger: GGTTCTACCATCAGCGGCTGGAAACCACACTTCCAACTTCAACTGGACTTTCCTGTCAACTCTGAATGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CAA 72 bp | CATTTGCCGGCATTCAGAGTTGACAGGAAAGTCCAGTaGAAGTTGGAAGTGTGGTTTCCAGCCGCTGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: HLPAFRVDRKVQ*KLEVWFPAADG Trigger: ACCATCAGCGGCTGGAAACCACACTTCCAACTTCAACTGGACTTTCCTGTCAACTCTGAATGCCGGCAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS TCA 72 bp | ATTTGCCGGCATTCAGAGTTGACAGGAAAGTCCAGTTaGAGTTGGAAGTGTGGTTTCCAGCCGCTGATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ICRHSELTGKSS*SWKCGFQPLMV Trigger: TACCATCAGCGGCTGGAAACCACACTTCCAACTTCAACTGGACTTTCCTGTCAACTCTGAATGCCGGCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS GCA 72 bp | GTGCCAATAACTCAGACAGCTGTGGGATTGACTGGTTaGCTGCTCTTCTTTTGTCAGCCTCTGATAGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VPITQTAVGLTG*LLFFCQPLIEV Trigger: AACCTCTATCAGAGGCTGACAAAAGAAGAGCAGGCAACCAGTCAATCCCACAGCTGTCTGAGTTATTGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CCA 72 bp | GCAAGTGCCAATAACTCAGACAGCTGTGGGATTGACTaGTTGCCTGCTCTTCTTTTGTCAGCCTCTGATAGA | + |
|
Preference number: 6 (lower is better) Translates to: ASANNSDSCGID*LPALLLSASDR Trigger: TCTATCAGAGGCTGACAAAAGAAGAGCAGGCAACCAGTCAATCCCACAGCTGTCTGAGTTATTGGCACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CAA 72 bp | AGTGCCAATAACTCAGACAGCTGTGGGATTGACTGGTaGCCTGCTCTTCTTTTGTCAGCCTCTGATAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SANNSDSCGIDW*PALLLSASDRG Trigger: ACCTCTATCAGAGGCTGACAAAAGAAGAGCAGGCAACCAGTCAATCCCACAGCTGTCTGAGTTATTGGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CAA 90 bp | CGTTTTGCAAGTGCCAATAACTCAGACAGCTGTGGGATTGACTGGTaGCCTGCTCTTCTTTTGTCAGCCTCTGATAGAGGTTTCATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RFASANNSDSCGIDW*PALLLSASDRGFMP Trigger: TGGCATGAAACCTCTATCAGAGGCTGACAAAAGAAGAGCAGGCAACCAGTCAATCCCACAGCTGTCTGAGTTATTGGCACTTGCAAAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CAA 90 bp | GTCGAGGGCCGAACAGATCAAATATCACAATCTTCTGTTCCCGTTTaGCAAGTGCCAATAACTCAGACAGCTGTGGGATTGACTGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VEGRTDQISQSSVPV*QVPITQTAVGLTGC Trigger: GCAACCAGTCAATCCCACAGCTGTCTGAGTTATTGGCACTTGCAAAACGGGAACAGAAGATTGTGATATTTGATCTGTTCGGCCCTCGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CAA 90 bp | TTTAAGAACCATTTGCCGGCATTCAGAGTTGACAGGAAAGTCCAGTaGAAGTTGGAAGTGTGGTTTCCAGCCGCTGATGGTAGAACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FKNHLPAFRVDRKVQ*KLEVWFPAADGRTS Trigger: AGAGGTTCTACCATCAGCGGCTGGAAACCACACTTCCAACTTCAACTGGACTTTCCTGTCAACTCTGAATGCCGGCAAATGGTTCTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CCA 72 bp | GACAGTCCAGCTATCAGCCACTTGTCCTTCCAGAAATaGCTTAAAACAGCAAGTAAGAAGGAGCACAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: DSPAISHLSFQK*LKTASKKEHRT Trigger: TGTCCTGTGCTCCTTCTTACTTGCTGTTTTAAGCCATTTCTGGAAGGACAAGTGGCTGATAGCTGGACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CCA 72 bp | AGAGTTGACAGGAAAGTCCAGTTGAAGTTGGAAGTGTaGTTTCCAGCCGCTGATGGTAGAACCTCTTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RVDRKVQLKLEV*FPAADGRTSLM Trigger: CATCAAAGAGGTTCTACCATCAGCGGCTGGAAACCACACTTCCAACTTCAACTGGACTTTCCTGTCAACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CCA 72 bp | CACCCTTCGGACAAAAGTGTTTCTGAGAGGATGTCCTaGTCGAGGGCCGAACAGATCAAATATCACAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: HPSDKSVSERMS*SRAEQIKYHNL Trigger: AAGATTGTGATATTTGATCTGTTCGGCCCTCGACCAGGACATCCTCTCAGAAACACTTTTGTCCGAAGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS TCA 72 bp | TGTGGTCACAGAGTTGATACTAGAACACCAGGCCAGTaGGAAGAGCCAAGGCTCATTGATAACATACACATG | + |
|
Preference number: 6 (lower is better) Translates to: CGHRVDTRTPGQ*EEPRLIDNIHM Trigger: CATGTGTATGTTATCAATGAGCCTTGGCTCTTCTCACTGGCCTGGTGTTCTAGTATCAACTCTGTGACCACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS TCA 72 bp | AAGTTGGCAGACGTAGGGGCCACCTCTGGCTTCTGTTaGGAGGCATCGTTATTTTCTGTTATATCTGTTATA | + |
|
Preference number: 6 (lower is better) Translates to: KLADVGATSGFC*EASLFSVISVI Trigger: TATAACAGATATAACAGAAAATAACGATGCCTCTCAACAGAAGCCAGAGGTGGCCCCTACGTCTGCCAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS GCA 72 bp | CAGGAAATTATAATCATCACAGTTATAAGGCTCAGGTaGACGAAGGGAGCAAAGATCTGCAGTGACAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QEIIIITVIRLR*TKGAKICSDSP Trigger: TGGACTGTCACTGCAGATCTTTGCTCCCTTCGTGCACCTGAGCCTTATAACTGTGATGATTATAATTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CCA 72 bp | CCAGATAAACAACCCAGTCAAAGCCGTTGTATTCATTaGAGGTTTCTACCCAGACGAACAGAAAAAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PDKQPSQSRCIH*RFLPRRTEKAQ Trigger: CTGTGCTTTTTCTGTTCGTCTGGGTAGAAACCTCCAATGAATACAACGGCTTTGACTGGGTTGTTTATCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS TCA 72 bp | GAGCACAGGACAATGACTAGGCAAATGAAGACCTTATaGGAAGTGTGCAAGTTTAGTTCAATCCTTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EHRTMTRQMKTL*EVCKFSSILSQ Trigger: CTGGGAAAGGATTGAACTAAACTTGCACACTTCTCATAAGGTCTTCATTTGCCTAGTCATTGTCCTGTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CCA 72 bp | GACAGTCCAGCAGCTATTTGTAGAGCTCTTAACCTTTaGAATACATTACACCTCTCCTGTATTTCTTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: DSPAAICRALNL*NTLHLSCISCS Trigger: CGAGCAAGAAATACAGGAGAGGTGTAATGTATTCCAAAGGTTAAGAGCTCTACAAATAGCTGCTGGACTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS CAA 72 bp | CGAACAGATCAAATATCACAATCTTCTGTTCCCGTTTaGCAAGTGCCAATAACTCAGACAGCTGTGGGATTG | + |
|
Preference number: 6 (lower is better) Translates to: RTDQISQSSVPV*QVPITQTAVGL Trigger: CAATCCCACAGCTGTCTGAGTTATTGGCACTTGCAAAACGGGAACAGAAGATTGTGATATTTGATCTGTTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||
| CDS TCA 72 bp | AAATCCCCAGTGGCATCAAATAAAGGCATAAAAGAATaGTCAGGAAGGACAGTCCAGCAGCTATTTGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KSPVASNKGIKE*SGRTVQQLFVE Trigger: CTCTACAAATAGCTGCTGGACTGTCCTTCCTGATCATTCTTTTATGCCTTTATTTGATGCCACTGGGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041860.13 ENSMUST00000170049.2 |
||