Pregenerated sensors for GDPD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019359Ensembl transcript IDs: ENSMUST00000019503.14, ENSMUST00000113744.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAAAGAAGATGAAGTGTGAGGGTGAGAAGAGAAGGCATGGAGTGTaGACTGTCTTCAGCATCTTAAGAGTTCTTCCGGAAAGGCCATTG | + |
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Preference number: 1 (lower is better) Translates to: EKKMKCEGEKRRHGV*TVFSILRVLPERPL Trigger: CAATGGCCTTTCCGGAAGAACTCTTAAGATGCTGAAGACAGTCCACACTCCATGCCTTCTCTTCTCACCCTCACACTTCATCTTCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR GCA 90 bp | ATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACCCTaGTTCTTCTATCCAAGTACATGTGCACACAAGCCTAATGCATTA | + |
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Preference number: 1 (lower is better) Translates to: ISFSHHSELSHPDTP*FFYPSTCAHKPNAL Trigger: TAATGCATTAGGCTTGTGTGCACATGTACTTGGATAGAAGAAGCAGGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR GCA 90 bp | GCACACAAGCCTAATGCATTATCTTGGCAATCTCTCTCACTTCCTTaGTTTAATTTCATTTTGGGAGTAACTTCTTGTCAGTCACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: AHKPNALSWQSLSLP*FNFILGVTSCQSLS Trigger: AGACAGTGACTGACAAGAAGTTACTCCCAAAATGAAATTAAAGCAAGGAAGTGAGAGAGATTGCCAAGATAATGCATTAGGCTTGTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR CCA 90 bp | CGACTAATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACAGCCTTAGACAGCAGCTaGTGGCGGCCTGGGCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: RLIHVKHQRQQIPWQLETALDSS*WRPGPG Trigger: GCCGGGCCCAGGCCGCCACCAGCTGCTGTCTAAGGC...TGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAATTAGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATTTTGGGAGTAACTTCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCGCCTTAGACAGCAGCTaGTGGCGGCCTGGGCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: FILGVTSCQSLSFRLIHVALDSS*WRPGPG Trigger: GCCGGGCCCAGGCCGCCACCAGCTGCTGTCTAAGGC...GACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTTACTCCCAAAATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGACACACCCTGCTTCTTCTATCCAAGTACATGTGCACACAAGCCTAATGCAGACATGCCCACCATCTaGACAGAGGGCCCTCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: PDTPCFFYPSTCAHKPNADMPTI*TEGPLS Trigger: ACTCAGAGGGCCCTCTGTCCAGATGGTGGGCATGTC...TGCATTAGGCTTGTGTGCACATGTACTTGGATAGAAGAAGCAGGGTGTGTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGTCCTGTCCTTCCCTTTaGACAGTGCACACAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: KAIVAKFPSVIILSYPTLSCPSL*TVHTGL Trigger: AAGGCCTGTGTGCACTGTTCAAAGGGAAGGACAGGA...CAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGCTTCCCTTTGAACAGTaGACACAGGCCTTAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: KAIVAKFPSVIILSYPTLLPFEQ*TQALDS Trigger: GCTGTCTAAGGCCTGTGTGCACTGTTCAAAGGGAAG...CAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGCAAGACATGCCCACCATCTaGACAGAGGGCCCTCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SCQSLSFRLIHVKHQRQQDMPTI*TEGPLS Trigger: ACTCAGAGGGCCCTCTGTCCAGATGGTGGGCATGTC...TTGCTGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR TCA 90 bp | CGACTAATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACAGGACAGAGGGCCCTCTaGGTTCAAAATCTTCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: RLIHVKHQRQQIPWQLETGQRAL*VQNLLL Trigger: TAACAGAAGATTTTGAACTCAGAGGGCCCTCTGTCC...TGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAATTAGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAATCTTCTGTTAGCAATGCTCCCTCCTCCAAACATTTGATTCTAGGACATTCCTGTCCTTCCCTTTaGACAGTGCACACAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: SKSSVSNAPSSKHLILGHSCPSL*TVHTGL Trigger: AAGGCCTGTGTGCACTGTTCAAAGGGAAGGACAGGA...ATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCTGCTTCTTCTATCCAAGTACATGTGCACACAAGCCTAATGCATTATCTTGGACAGAGGGCCCTCTaGGTTCAAAATCTTCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: HPASSIQVHVHTSLMHYLGQRAL*VQNLLL Trigger: TAACAGAAGATTTTGAACTCAGAGGGCCCTCTGTCC...AAGATAATGCATTAGGCTTGTGTGCACATGTACTTGGATAGAAGAAGCAGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR TCA 90 bp | TTCATTTTGGGAGTAACTTCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAATTCCATGGCAGCTTaGGACATGCCCACCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: FILGVTSCQSLSFRLIHVNSMAA*DMPTIW Trigger: CCAGATGGTGGGCATGTCTCAAGCTGCCATGGAATT...GACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTTACTCCCAAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAAATCTTCTGTTAGCAATGCTCCCTCCTCCAAACATTTGATTCTAGGACATCTTCCCTTTGAACAGTaGACACAGGCCTTAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: SKSSVSNAPSSKHLILGHLPFEQ*TQALDS Trigger: GCTGTCTAAGGCCTGTGTGCACTGTTCAAAGGGAAG...ATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR TCA 72 bp | TCTAGGACATTCCACTTCAGCTCCTGTCCTTCCCTTTaGACAGTGCACACAGGCCTTAGACAGCAGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: SRTFHFSSCPSL*TVHTGLRQQLV Trigger: CACCAGCTGCTGTCTAAGGCCTGTGTGCACTGTTCAAAGGGAAGGACAGGAGCTGAAGTGGAATGTCCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTGTGAGGGTGAGAAGAGAAGGCATGGAGTGTGGACTGTCTTCAGCATCTTACTCCTGTCCTTCCCTTaGAACAGTGCACACAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: KCEGEKRRHGVWTVFSILLLSFP*NSAHRP Trigger: AGGCCTGTGTGCACTGTTCAAAGGGAAGGACAGGAG...TAAGATGCTGAAGACAGTCCACACTCCATGCCTTCTCTTCTCACCCTCACACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCACTCCTGTCCTTCCCTTaGAACAGTGCACACAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: IHVKHQRQQIPWQLETCPLLSFP*NSAHRP Trigger: AGGCCTGTGTGCACTGTTCAAAGGGAAGGACAGGAG...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACCCAAATTCCATGGCAGCTaGAGACATGCCCACCATCTG | + |
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Preference number: 3 (lower is better) Translates to: CGQISFSHHSELSHPDTPKFHGS*RHAHHL Trigger: CAGATGGTGGGCATGTCTCAAGCTGCCATGGAATTT...GGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR GCA 72 bp | AGTCATCATTCTGAGCTATCCCACCCTGACACACCCTaGTTCTTCTATCCAAGTACATGTGCACACAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: SHHSELSHPDTP*FFYPSTCAHKP Trigger: AGGCTTGTGTGCACATGTACTTGGATAGAAGAAGCAGGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACCCCCCTCCTCCAAACATTaGATTCTAGGACATTCCACT | + |
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Preference number: 3 (lower is better) Translates to: CGQISFSHHSELSHPDTPPSSKH*ILGHST Trigger: AGTGGAATGTCCTAGAATCAAATGTTTGGAGGAGGG...GGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGCAACCCTCCTCCAAACATTaGATTCTAGGACATTCCACT | + |
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Preference number: 3 (lower is better) Translates to: SCQSLSFRLIHVKHQRQQPSSKH*ILGHST Trigger: AGTGGAATGTCCTAGAATCAAATGTTTGGAGGAGGG...TTGCTGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| 3UTR GCA 72 bp | CCTAATGCATTATCTTGGCAATCTCTCTCACTTCCTTaGTTTAATTTCATTTTGGGAGTAACTTCTTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: PNALSWQSLSLP*FNFILGVTSCQ Trigger: CTGACAAGAAGTTACTCCCAAAATGAAATTAAAGCAAGGAAGTGAGAGAGATTGCCAAGATAATGCATTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CCA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCAGGCAGCGGGCCCAGATaGAGCAGCAGCCGGGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: IHVKHQRQQIPWQLETCPGSGPR*SSSRGN Trigger: ATTCCCCCGGCTGCTGCTCCATCTGGGCCCGCTGCC...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR TCA 90 bp | GGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACGCAACTGCTCCAATGTaGAGGAATGGGGCTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GHCGQISFSHHSELSHPDATAPM*RNGAVA Trigger: GGCCACAGCCCCATTCCTTCACATTGGAGCAGTTGC...GTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR TCA 90 bp | TGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACCCTGCAGGGGGAAGAGATaGACAGCAGCGGCATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CGQISFSHHSELSHPDTPCRGKR*TAAASG Trigger: ACCTGATGCCGCTGCTGTTCATCTCTTCCCCCTGCA...GGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR GCA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCAGGCTGTCCACAGAGTTaGAGGAGCAGGCCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IHVKHQRQQIPWQLETCPGCPQS*RSRPRS Trigger: GCTCCTGGGCCTGCTCCTGCAACTCTGTGGACAGCC...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CCA 90 bp | TCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGCAAGGCAGCGGGCCCAGATaGAGCAGCAGCCGGGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SCQSLSFRLIHVKHQRQQGSGPR*SSSRGN Trigger: ATTCCCCCGGCTGCTGCTCCATCTGGGCCCGCTGCC...TTGCTGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CCA 90 bp | GGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACATATCTGGCGCATTCTaGGGGCGCGTTGCTGCACGT | + |
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Preference number: 4 (lower is better) Translates to: GHCGQISFSHHSELSHPDISGAF*GRVAAR Trigger: ACGTGCAGCAACGCGCCCCCAGAATGCGCCAGATAT...GTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR TCA 90 bp | GGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACGTCACTGCTGTGGGCTaGGATTCGCTCTGGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: GHCGQISFSHHSELSHPDVTAVG*DSLWKH Trigger: GTGTTTCCAGAGCGAATCTCAGCCCACAGCAGTGAC...GTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACCCGGCCTCTTGGGTGGATaGGGTAGAAGGTATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: CGQISFSHHSELSHPDTPGLLGG*GRRYQP Trigger: TGGCTGATACCTTCTACCGCATCCACCCAAGAGGCC...GGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACCCCCCAGGAGAAGTCACTaGTGTGGGCTGAGATTCGCT | + |
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Preference number: 4 (lower is better) Translates to: CGQISFSHHSELSHPDTPPRRSH*CGLRFA Trigger: AGCGAATCTCAGCCCACAGCAGTGACTTCTCCTGGG...GGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CCA 90 bp | TGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACCCAACCTTGGGGCCTCTTaGGTGGATGCGGTAGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: CGQISFSHHSELSHPDTPNLGAS*VDAVEG Trigger: ACCTTCTACCGCATCCACCCAAGAGGCCCCAAGGTT...GGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR TCA 90 bp | AAGGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGCTTGATAGGGGAGGTTaGGAAACTGGGGCCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KAIVAKFPSVIILSYPTLLDRGG*ETGASQ Trigger: CTGAGAGGCCCCAGTTTCTCAACCTCCCCTATCAAG...CAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR GCA 90 bp | CCTGACACACCCTGCTTCTTCTATCCAAGTACATGTGCACACAAGCCTAATGCAGACAGAATCCACCCCTaGACACCAGAGCAGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: PDTPCFFYPSTCAHKPNADRIHP*TPEQGE Trigger: TTCTCCCTGCTCTGGTGTGCAGGGGTGGATTCTGTC...TGCATTAGGCTTGTGTGCACATGTACTTGGATAGAAGAAGCAGGGTGTGTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CCA 90 bp | CCTGACACACCCTGCTTCTTCTATCCAAGTACATGTGCACACAAGCCTAATGCAGAAGGAATGGGGCTGTaGCCTGCAGTGACAGTCGTA | + |
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Preference number: 4 (lower is better) Translates to: PDTPCFFYPSTCAHKPNAEGMGL*PAVTVV Trigger: TACGACTGTCACTGCAGGCCACAGCCCCATTCCTTC...TGCATTAGGCTTGTGTGCACATGTACTTGGATAGAAGAAGCAGGGTGTGTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CCA 90 bp | ATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACATATCTGGCGCATTCTaGGGGCGCGTTGCTGCACGT | + |
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Preference number: 4 (lower is better) Translates to: IVAKFPSVIILSYPTLTHISGAF*GRVAAR Trigger: ACGTGCAGCAACGCGCCCCCAGAATGCGCCAGATAT...GTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CCA 90 bp | TGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACCCATCTGTTGCAGCAGCTaGCAGGCATTGGTGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: CGQISFSHHSELSHPDTPICCSS*QALVVT Trigger: TGTCACCACCAATGCCTGCCAGCTGCTGCAACAGAT...GGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR TCA 90 bp | GGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACCCACTAGAAGTACAATaGGGAGCAGCAGCACCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GHCGQISFSHHSELSHPDPLEVQ*GAAAPC Trigger: ACAAGGTGCTGCTGCTCCTCATTGTACTTCTAGTGG...GTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR TCA 90 bp | AAGGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGGTCCAATTGCCTCCCTaGTGTCCATATATCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: KAIVAKFPSVIILSYPTLVQLPP*CPYIWR Trigger: GCGCCAGATATATGGACATCAGGGAGGCAATTGGAC...CAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR TCA 90 bp | AAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACCCTGCTTCTCTTGATAGGGGAGGTTaGGAAACTGGGGCCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KFPSVIILSYPTLTHPASLDRGG*ETGASQ Trigger: CTGAGAGGCCCCAGTTTCTCAACCTCCCCTATCAAG...AGAAGCAGGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR GCA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCAGACAGAATCCACCCCTaGACACCAGAGCAGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: IHVKHQRQQIPWQLETCPDRIHP*TPEQGE Trigger: TTCTCCCTGCTCTGGTGTGCAGGGGTGGATTCTGTC...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CCA 90 bp | ATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCACCATGGATATTTCCTCCAGTaGCAGCTGTACAGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: MSNTKGSKFHGSLRHAHHGYFLQ*QLYRQW Trigger: CCACTGCCTGTACAGCTGCCACTGGAGGAAATATCC...ATGGTGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR TCA 90 bp | ATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACGCAAGGATGCATATGTaGCCAGGAGAGAGACGACCA | + |
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Preference number: 4 (lower is better) Translates to: IVAKFPSVIILSYPTLTHARMHM*PGERRP Trigger: TGGTCGTCTCTCTCCTGGTCACATATGCATCCTTGC...GTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR TCA 90 bp | CGACTAATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACAGCCAGGCCAACAAGGTaGTTCCAGCAACTGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLIHVKHQRQQIPWQLETARPTR*FQQLLQ Trigger: TTGGAGCAGTTGCTGGAATCACCTTGTTGGCCTGGC...TGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAATTAGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR TCA 90 bp | GGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACTGGAGGCACAGTCGGTaGTCACCCAAATCATTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHCGQISFSHHSELSHPDWRHSR*SPKSLS Trigger: ACTTAATGATTTGGGTGATCACCGACTGTGCCTCCA...GTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGTGAGGGTGAGAAGAGAAGGCATGGAGTGTGGACTGTCTTCAGCATCTTAAATGGGGCTGTGGCCTaGAGTGACAGTCGTAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: KCEGEKRRHGVWTVFSILNGAVA*SDSRKL Trigger: TAGTTTACGACTGTCACTGCAGGCCACAGCCCCATT...TAAGATGCTGAAGACAGTCCACACTCCATGCCTTCTCTTCTCACCCTCACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | GGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACGGTGATTCCAGCAACTaGTCCAATGTGAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GHCGQISFSHHSELSHPDGDSSN*SNVKEW Trigger: CCATTCCTTCACATTGGAGCAGTTGCTGGAATCACC...GTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGTGAGGGTGAGAAGAGAAGGCATGGAGTGTGGACTGTCTTCAGCATCTTAGGCCTTGATATCCAATaGTGGCAGGTCTTGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KCEGEKRRHGVWTVFSILGLDIQ*WQVLIG Trigger: CCCTATCAAGACCTGCCAGCATTGGATATCAAGGCC...TAAGATGCTGAAGACAGTCCACACTCCATGCCTTCTCTTCTCACCCTCACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGGTATGTGTGGTTTCTTaGGGGTCGGCGCAAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KAIVAKFPSVIILSYPTLVCVVS*GSAQVK Trigger: TTTGACTTGCGCCGACCCCCAAGAAACCACACATAC...CAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR CCA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCAATCTGTTGCAGCAGCTaGCAGGCATTGGTGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: IHVKHQRQQIPWQLETCPICCSS*QALVVT Trigger: TGTCACCACCAATGCCTGCCAGCTGCTGCAACAGAT...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGTGAGGGTGAGAAGAGAAGGCATGGAGTGTGGACTGTCTTCAGCATCTTAGGTGATTCCAGCAACTaGTCCAATGTGAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KCEGEKRRHGVWTVFSILGDSSN*SNVKEW Trigger: CCATTCCTTCACATTGGAGCAGTTGCTGGAATCACC...TAAGATGCTGAAGACAGTCCACACTCCATGCCTTCTCTTCTCACCCTCACACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | TCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGCAACCCAGGAGAAGTCACTaGTGTGGGCTGAGATTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCQSLSFRLIHVKHQRQQPRRSH*CGLRFA Trigger: AGCGAATCTCAGCCCACAGCAGTGACTTCTCCTGGG...TTGCTGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR CCA 90 bp | CGACTAATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACAGGATATTTCCTCCAGTaGCAGCTGTACAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIHVKHQRQQIPWQLETGYFLQ*QLYRQW Trigger: CCACTGCCTGTACAGCTGCCACTGGAGGAAATATCC...TGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAATTAGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCACCATATCCAGTGTCCCCAATaGCGGAACAGGAATTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MSNTKGSKFHGSLRHAHHIQCPQ*RNRNSL Trigger: CAATGAATTCCTGTTCCGCCATTGGGGACACTGGAT...ATGGTGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGCAAGAAGGAATGGGGCTGTaGCCTGCAGTGACAGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SCQSLSFRLIHVKHQRQQEGMGL*PAVTVV Trigger: TACGACTGTCACTGCAGGCCACAGCCCCATTCCTTC...TTGCTGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR TCA 90 bp | AACTTCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGCCAGGCCAACAAGGTaGTTCCAGCAACTGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NFLSVTVFPTNSCQTPKAARPTR*FQQLLQ Trigger: TTGGAGCAGTTGCTGGAATCACCTTGTTGGCCTGGC...TGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAATCTTCTGTTAGCAATGCTCCCTCCTCCAAACATTTGATTCTAGGACATTGCAGGGGGAAGAGATaGACAGCAGCGGCATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKSSVSNAPSSKHLILGHCRGKR*TAAASG Trigger: ACCTGATGCCGCTGCTGTTCATCTCTTCCCCCTGCA...ATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGCAAGTCCAATTGCCTCCCTaGTGTCCATATATCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SCQSLSFRLIHVKHQRQQVQLPP*CPYIWR Trigger: GCGCCAGATATATGGACATCAGGGAGGCAATTGGAC...TTGCTGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | CACCCTGCTTCTTCTATCCAAGTACATGTGCACACAAGCCTAATGCATTATCTTAGCTTGGGACACGTTTaGACTCAACACAGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPASSIQVHVHTSLMHYLSLGHV*TQHSLQ Trigger: CTGGAGGCTGTGTTGAGTGCAAACGTGTCCCAAGCT...AAGATAATGCATTAGGCTTGTGTGCACATGTACTTGGATAGAAGAAGCAGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCAGCCTCTCAGTCCAATTaGCTCCCTGATGTCCATATA | + |
|
Preference number: 4 (lower is better) Translates to: IHVKHQRQQIPWQLETCPASQSN*LPDVHI Trigger: TATATGGACATCAGGGAGGCAATTGGACTGAGAGGC...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR TCA 90 bp | AACTTCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGCAAGGATGCATATGTaGCCAGGAGAGAGACGACCA | + |
|
Preference number: 4 (lower is better) Translates to: NFLSVTVFPTNSCQTPKAARMHM*PGERRP Trigger: TGGTCGTCTCTCTCCTGGTCACATATGCATCCTTGC...TGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR TCA 90 bp | TTCATTTTGGGAGTAACTTCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCGTCACTGCTGTGGGCTaGGATTCGCTCTGGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: FILGVTSCQSLSFRLIHVVTAVG*DSLWKH Trigger: GTGTTTCCAGAGCGAATCTCAGCCCACAGCAGTGAC...GACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTTACTCCCAAAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGAGATACAGTCGCACTTaGTGGTTTGCATCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAIVAKFPSVIILSYPTLRYSRT*WFASSV Trigger: AACAGAAGATGCAAACCAGCAAGTGCGACTGTATCT...CAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | CACCCTGCTTCTTCTATCCAAGTACATGTGCACACAAGCCTAATGCATTATCTTAAACTATGCCACTCCTaGCGCCATTGGATATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPASSIQVHVHTSLMHYLKLCHS*RHWISR Trigger: CCTGGATATCCAATGGCGGCAGGAGTGGCATAGTTT...AAGATAATGCATTAGGCTTGTGTGCACATGTACTTGGATAGAAGAAGCAGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | AACTTCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAAGCTTGGGACACGTTTaGACTCAACACAGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NFLSVTVFPTNSCQTPKASLGHV*TQHSLQ Trigger: CTGGAGGCTGTGTTGAGTGCAAACGTGTCCCAAGCT...TGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CCA 90 bp | AACTTCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGAGAAGTCACTGCTGTaGGCTGAGATTCGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NFLSVTVFPTNSCQTPKAEKSLL*AEIRSG Trigger: TCCAGAGCGAATCTCAGCCCACAGCAGTGACTTCTC...TGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR CCA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCACAAAGAACCATAGCTTaGGACACGTTTGCACTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IHVKHQRQQIPWQLETCPQRTIA*DTFALN Trigger: GTTGAGTGCAAACGTGTCCCAAGCTATGGTTCTTTG...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGCAATGGAGGCACAGTCGGTaGTCACCCAAATCATTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCQSLSFRLIHVKHQRQQWRHSR*SPKSLS Trigger: ACTTAATGATTTGGGTGATCACCGACTGTGCCTCCA...TTGCTGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCAAGATACAGTCGCACTTaGTGGTTTGCATCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IHVKHQRQQIPWQLETCPRYSRT*WFASSV Trigger: AACAGAAGATGCAAACCAGCAAGTGCGACTGTATCT...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAATCTTCTGTTAGCAATGCTCCCTCCTCCAAACATTTGATTCTAGGACATGAGAAGTCACTGCTGTaGGCTGAGATTCGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKSSVSNAPSSKHLILGHEKSLL*AEIRSG Trigger: TCCAGAGCGAATCTCAGCCCACAGCAGTGACTTCTC...ATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR TCA 90 bp | TTCATTTTGGGAGTAACTTCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCCCACTAGAAGTACAATaGGGAGCAGCAGCACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FILGVTSCQSLSFRLIHVPLEVQ*GAAAPC Trigger: ACAAGGTGCTGCTGCTCCTCATTGTACTTCTAGTGG...GACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTTACTCCCAAAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCATCGCACTTGCTGGTTTaGATCTTCTGTTTAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: IHVKHQRQQIPWQLETCPSHLLV*IFCLGY Trigger: ATATCCTAAACAGAAGATGCAAACCAGCAAGTGCGA...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAATCTTCTGTTAGCAATGCTCCCTCCTCCAAACATTTGATTCTAGGACATAATGGGGCTGTGGCCTaGAGTGACAGTCGTAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: SKSSVSNAPSSKHLILGHNGAVA*SDSRKL Trigger: TAGTTTACGACTGTCACTGCAGGCCACAGCCCCATT...ATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | TTCATTTTGGGAGTAACTTCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCGGCCTTGATATCCAATaGTGGCAGGTCTTGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FILGVTSCQSLSFRLIHVGLDIQ*WQVLIG Trigger: CCCTATCAAGACCTGCCAGCATTGGATATCAAGGCC...GACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTTACTCCCAAAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | CGACTAATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATCGCACTTGCTGGTTTaGATCTTCTGTTTAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: RLIHVKHQRQQIPWQLETSHLLV*IFCLGY Trigger: ATATCCTAAACAGAAGATGCAAACCAGCAAGTGCGA...TGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAATTAGTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTTAATTTCATTTTGGGAGTAACTTCTTGTCAGTCACTGTCTTTCCGACTAAAACTATGCCACTCCTaGCGCCATTGGATATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFNFILGVTSCQSLSFRLKLCHS*RHWISR Trigger: CCTGGATATCCAATGGCGGCAGGAGTGGCATAGTTT...TAGTCGGAAAGACAGTGACTGACAAGAAGTTACTCCCAAAATGAAATTAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAATCTTCTGTTAGCAATGCTCCCTCCTCCAAACATTTGATTCTAGGACATGCCTCTCAGTCCAATTaGCTCCCTGATGTCCATATA | + |
|
Preference number: 4 (lower is better) Translates to: SKSSVSNAPSSKHLILGHASQSN*LPDVHI Trigger: TATATGGACATCAGGGAGGCAATTGGACTGAGAGGC...ATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTAATTTCATTTTGGGAGTAACTTCTTGTCAGTCACTGTCTTTCCGACTAGTATGTGTGGTTTCTTaGGGGTCGGCGCAAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CFNFILGVTSCQSLSFRLVCVVS*GSAQVK Trigger: TTTGACTTGCGCCGACCCCCAAGAAACCACACATAC...TAGTCGGAAAGACAGTGACTGACAAGAAGTTACTCCCAAAATGAAATTAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAATCTTCTGTTAGCAATGCTCCCTCCTCCAAACATTTGATTCTAGGACATCAAAGAACCATAGCTTaGGACACGTTTGCACTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKSSVSNAPSSKHLILGHQRTIA*DTFALN Trigger: GTTGAGTGCAAACGTGTCCCAAGCTATGGTTCTTTG...ATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| 3UTR CAA 72 bp | CTCACAACAAAAACCTACCATAGACACAATATTATATaGCTAAATGAGCTTTTTCACTCCCAGCCTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTTKTYHRHNII*LNELFHSQPVG Trigger: GCCTACAGGCTGGGAGTGAAAAAGCTCATTTAGCAATATAATATTGTGTCTATGGTAGGTTTTTGTTGTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS GCA 90 bp | AATGGGGCTGTGGCCTGCAGTGACAGTCGTAAACTATGCCACTCCTaGCGCCATTGGATATCCAGGCCCACCAGTCCCGCGGCCACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: NGAVACSDSRKLCHS*RHWISRPTSPAATR Trigger: TCTAGTGGCCGCGGGACTGGTGGGCCTGGATATCCAATGGCGGCAGGAGTGGCATAGTTTACGACTGTCACTGCAGGCCACAGCCCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS CCA 90 bp | GTGGCCTGCAGTGACAGTCGTAAACTATGCCACTCCTGCCGCCATTaGATATCCAGGCCCACCAGTCCCGCGGCCACTAGAAGTACAATG | + |
|
Preference number: 5 (lower is better) Translates to: VACSDSRKLCHSCRH*ISRPTSPAATRSTM Trigger: CATTGTACTTCTAGTGGCCGCGGGACTGGTGGGCCTGGATATCCAATGGCGGCAGGAGTGGCATAGTTTACGACTGTCACTGCAGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS TCA 90 bp | GGTGGATGCGGTAGAAGGTATCAGCCACAGGCCAGGCCAACAAGGTaGTTCCAGCAACTGCTCCAATGTGAAGGAATGGGGCTGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGCGRRYQPQARPTR*FQQLLQCEGMGLWP Trigger: AGGCCACAGCCCCATTCCTTCACATTGGAGCAGTTGCTGGAATCACCTTGTTGGCCTGGCCTGTGGCTGATACCTTCTACCGCATCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS TCA 90 bp | GCCACAGGCCAGGCCAACAAGGTGATTCCAGCAACTGCTCCAATGTaGAGGAATGGGGCTGTGGCCTGCAGTGACAGTCGTAAACTATGC | + |
|
Preference number: 5 (lower is better) Translates to: ATGQANKVIPATAPM*RNGAVACSDSRKLC Trigger: GCATAGTTTACGACTGTCACTGCAGGCCACAGCCCCATTCCTTCACATTGGAGCAGTTGCTGGAATCACCTTGTTGGCCTGGCCTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS GCA 90 bp | CAGAAAGGTTGCCTCTCTAGGAACCAGGTTCCAGCATTGAGTCTCTaGAGTTCAGCCCAGGAGAAGTCACTGCTGTGGGCTGAGATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QKGCLSRNQVPALSL*SSAQEKSLLWAEIR Trigger: GCGAATCTCAGCCCACAGCAGTGACTTCTCCTGGGCTGAACTGCAGAGACTCAATGCTGGAACCTGGTTCCTAGAGAGGCAACCTTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS CCA 90 bp | CCAGCATTGAGTCTCTGCAGTTCAGCCCAGGAGAAGTCACTGCTGTaGGCTGAGATTCGCTCTGGAAACACAGAGGCTACATTGGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PALSLCSSAQEKSLL*AEIRSGNTEATLVV Trigger: GACTACCAATGTAGCCTCTGTGTTTCCAGAGCGAATCTCAGCCCACAGCAGTGACTTCTCCTGGGCTGAACTGCAGAGACTCAATGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
||
| CDS TCA 90 bp | ATTGAGTCTCTGCAGTTCAGCCCAGGAGAAGTCACTGCTGTGGGCTaGGATTCGCTCTGGAAACACAGAGGCTACATTGGTAGTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IESLQFSPGEVTAVG*DSLWKHRGYIGSPA Trigger: AGCAGGACTACCAATGTAGCCTCTGTGTTTCCAGAGCGAATCTCAGCCCACAGCAGTGACTTCTCCTGGGCTGAACTGCAGAGACTCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS TCA 90 bp | AGAGCTGCTGCTTCCTTCAGTAGTTCTTCTAATGCTGGTATGGTCTaGTTCTCAGCCTCCTTCCGATCAGAGCCTGACAGCTTTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAAASFSSSSNAGMV*FSASFRSEPDSFLA Trigger: GGCCAAAAAGCTGTCAGGCTCTGATCGGAAGGAGGCTGAGAATCAGACCATACCAGCATTAGAAGAACTACTGAAGGAAGCAGCAGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | CCTGACACACCCTGCTTCTTCTATCCAAGTACATGTGCACACAAGCCTAATGCAAGTATGTGTGGTTTCTaGGGGGTCGGCGCAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PDTPCFFYPSTCAHKPNASMCGF*GVGASQ Trigger: TTGACTTGCGCCGACCCCCAAGAAACCACACATACT...TGCATTAGGCTTGTGTGCACATGTACTTGGATAGAAGAAGCAGGGTGTGTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | AAGGCCATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGAGTATGTGTGGTTTCTaGGGGGTCGGCGCAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: KAIVAKFPSVIILSYPTLSMCGF*GVGASQ Trigger: TTGACTTGCGCCGACCCCCAAGAAACCACACATACT...CAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAATGGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | CGACTAATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACAAGCAGCTGGCAGGCATaGGTGGTGACAGAATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RLIHVKHQRQQIPWQLETSSWQA*VVTEST Trigger: GGTGGATTCTGTCACCACCAATGCCTGCCAGCTGCT...TGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAATTAGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | ATTGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACGAGAAGAGCCAGGGCTaGTTCACTACAAACAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVAKFPSVIILSYPTLTHEKSQG*FTTNRF Trigger: GAACCTGTTTGTAGTGAACAAGCCCTGGCTCTTCTC...GTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | TGTGGCCAAATTTCCTTCAGTCATCATTCTGAGCTATCCCACCCTGACACACCCGCGAAATTGTTGATCTaGGTCAGTAGCACTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CGQISFSHHSELSHPDTPAKLLI*VSSTAV Trigger: AACAGCAGTGCTACTGACCAAGATCAACAATTTCGC...GGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGGAAATTTGGCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CCA 90 bp | CTCCAGTGTCTGATTCACAAAAGTATCATAGTATGTGTGGTTTCTTaGGGGTCGGCGCAAGTCAAACATGATGGAAAGGTTGAGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQCLIHKSIIVCVVS*GSAQVKHDGKVESC Trigger: GCAGCTCTCAACCTTTCCATCATGTTTGACTTGCGCCGACCCCCAAGAAACCACACATACTATGATACTTTTGTGAATCAGACACTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCAAAGTTGTGCAGATCATaGAGAAGGATGAGCCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: IHVKHQRQQIPWQLETCPKLCRS*RRMSPM Trigger: CATCGGGCTCATCCTTCTCAATGATCTGCACAACTT...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | TCAAAATCTTCTGTTAGCAATGCTCCCTCCTCCAAACATTTGATTCTAGGACATAGCAGCTGGCAGGCATaGGTGGTGACAGAATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SKSSVSNAPSSKHLILGHSSWQA*VVTEST Trigger: GGTGGATTCTGTCACCACCAATGCCTGCCAGCTGCT...ATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | AAGTGTGAGGGTGAGAAGAGAAGGCATGGAGTGTGGACTGTCTTCAGCATCTTACGGAACAGGAATTCATaGAAGTTGTGCAGATCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KCEGEKRRHGVWTVFSILRNRNS*KLCRSL Trigger: CAATGATCTGCACAACTTCAATGAATTCCTGTTCCG...TAAGATGCTGAAGACAGTCCACACTCCATGCCTTCTCTTCTCACCCTCACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | TCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAGCAACAATGCTGGCAGGTCTaGATAGGGGAGGTTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SCQSLSFRLIHVKHQRQQQCWQV*IGEVEK Trigger: TTTCTCAACCTCCCCTATCAAGACCTGCCAGCATTG...TTGCTGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | ATTCATGTCAAACACCAAAGGCAGCAAATTCCATGGCAGCTTGAGACATGCCCAGCGAAATTGTTGATCTaGGTCAGTAGCACTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IHVKHQRQQIPWQLETCPAKLLI*VSSTAV Trigger: AACAGCAGTGCTACTGACCAAGATCAACAATTTCGC...TGGGCATGTCTCAAGCTGCCATGGAATTTGCTGCCTTTGGTGTTTGACATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | TCAAAATCTTCTGTTAGCAATGCTCCCTCCTCCAAACATTTGATTCTAGGACATCAATGCTGGCAGGTCTaGATAGGGGAGGTTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SKSSVSNAPSSKHLILGHQCWQV*IGEVEK Trigger: TTTCTCAACCTCCCCTATCAAGACCTGCCAGCATTG...ATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | AACTTCTTGTCAGTCACTGTCTTTCCGACTAATTCATGTCAAACACCAAAGGCAAGGAATTCATTGAAGTaGTGCAGATCATTGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NFLSVTVFPTNSCQTPKARNSLK*CRSLRR Trigger: CCTTCTCAATGATCTGCACAACTTCAATGAATTCCT...TGCCTTTGGTGTTTGACATGAATTAGTCGGAAAGACAGTGACTGACAAGAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | TCAAAATCTTCTGTTAGCAATGCTCCCTCCTCCAAACATTTGATTCTAGGACATCGGAACAGGAATTCATaGAAGTTGTGCAGATCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SKSSVSNAPSSKHLILGHRNRNS*KLCRSL Trigger: CAATGATCTGCACAACTTCAATGAATTCCTGTTCCG...ATGTCCTAGAATCAAATGTTTGGAGGAGGGAGCATTGCTAACAGAAGATTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS-3UTR CAA 90 bp | TGCTTTAATTTCATTTTGGGAGTAACTTCTTGTCAGTCACTGTCTTTCCGACTAAGGAATTCATTGAAGTaGTGCAGATCATTGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CFNFILGVTSCQSLSFRLRNSLK*CRSLRR Trigger: CCTTCTCAATGATCTGCACAACTTCAATGAATTCCT...TAGTCGGAAAGACAGTGACTGACAAGAAGTTACTCCCAAAATGAAATTAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS GCA 72 bp | GTGGCCTGCAGTGACAGTCGTAAACTATGCCACTCCTaGCGCCATTGGATATCCAGGCCCACCAGTCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: VACSDSRKLCHS*RHWISRPTSPA Trigger: CGCGGGACTGGTGGGCCTGGATATCCAATGGCGGCAGGAGTGGCATAGTTTACGACTGTCACTGCAGGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS TCA 72 bp | CCAGGCCCACCAGTCCCGCGGCCACTAGAAGTACAATaGGGAGCAGCAGCACCTTGTGGAGACTGTGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PGPPVPRPLEVQ*GAAAPCGDCED Trigger: ATCTTCACAGTCTCCACAAGGTGCTGCTGCTCCTCATTGTACTTCTAGTGGCCGCGGGACTGGTGGGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS GCA 72 bp | AATGGGGCTGTGGCCTGCAGTGACAGTCGTAAACTATaGCACTCCTGCCGCCATTGGATATCCAGGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: NGAVACSDSRKL*HSCRHWISRPT Trigger: GGTGGGCCTGGATATCCAATGGCGGCAGGAGTGGCATAGTTTACGACTGTCACTGCAGGCCACAGCCCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS GCA 72 bp | AGCCACAGGCCAGGCCAACAAGGTGATTCCAGCAACTaGTCCAATGTGAAGGAATGGGGCTGTGGCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHRPGQQGDSSN*SNVKEWGCGLQ Trigger: CTGCAGGCCACAGCCCCATTCCTTCACATTGGAGCAGTTGCTGGAATCACCTTGTTGGCCTGGCCTGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS GCA 72 bp | GCAACAGTAGCAGAACCTTGGGGCCTCTTGGGTGGATaGGGTAGAAGGTATCAGCCACAGGCCAGGCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: ATVAEPWGLLGG*GRRYQPQARPT Trigger: TGTTGGCCTGGCCTGTGGCTGATACCTTCTACCGCATCCACCCAAGAGGCCCCAAGGTTCTGCTACTGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CCA 72 bp | AGTGACAGTCGTAAACTATGCCACTCCTGCCGCCATTaGATATCCAGGCCCACCAGTCCCGCGGCCACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SDSRKLCHSCRH*ISRPTSPAATR Trigger: TCTAGTGGCCGCGGGACTGGTGGGCCTGGATATCCAATGGCGGCAGGAGTGGCATAGTTTACGACTGTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CCA 72 bp | GGGGGCGCGTTGCTGCACGTTAGCACGGTCTTCATCTaGGAGCCAAAGAACCATAGCTTGGGACACGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGALLHVSTVFI*EPKNHSLGHVC Trigger: GCAAACGTGTCCCAAGCTATGGTTCTTTGGCTCCCAGATGAAGACCGTGCTAACGTGCAGCAACGCGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CAA 72 bp | CTGATGTCCATATATCTGGCGCATTCTGGGGGCGCGTaGCTGCACGTTAGCACGGTCTTCATCTGGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LMSIYLAHSGGA*LHVSTVFIWEP Trigger: TGGCTCCCAGATGAAGACCGTGCTAACGTGCAGCAACGCGCCCCCAGAATGCGCCAGATATATGGACATCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS TCA 72 bp | TTGAGAAACTGGGGCCTCTCAGTCCAATTGCCTCCCTaGTGTCCATATATCTGGCGCATTCTGGGGGCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LRNWGLSVQLPP*CPYIWRILGAR Trigger: ACGCGCCCCCAGAATGCGCCAGATATATGGACATCAGGGAGGCAATTGGACTGAGAGGCCCCAGTTTCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS GCA 72 bp | TGCCTCTCTAGGAACCAGGTTCCAGCATTGAGTCTCTaGAGTTCAGCCCAGGAGAAGTCACTGCTGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLSRNQVPALSL*SSAQEKSLLWA Trigger: AGCCCACAGCAGTGACTTCTCCTGGGCTGAACTGCAGAGACTCAATGCTGGAACCTGGTTCCTAGAGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS GCA 72 bp | TGTCCATATATCTGGCGCATTCTGGGGGCGCGTTGCTaGACGTTAGCACGGTCTTCATCTGGGAGCCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: CPYIWRILGARC*TLARSSSGSQR Trigger: TCTTTGGCTCCCAGATGAAGACCGTGCTAACGTGCAGCAACGCGCCCCCAGAATGCGCCAGATATATGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CAA 90 bp | ATTGCCTCCCTGATGTCCATATATCTGGCGCATTCTGGGGGCGCGTaGCTGCACGTTAGCACGGTCTTCATCTGGGAGCCAAAGAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: IASLMSIYLAHSGGA*LHVSTVFIWEPKNH Trigger: ATGGTTCTTTGGCTCCCAGATGAAGACCGTGCTAACGTGCAGCAACGCGCCCCCAGAATGCGCCAGATATATGGACATCAGGGAGGCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS TCA 72 bp | AGTACAATGAGGAGCAGCAGCACCTTGTGGAGACTGTaGAGATGCAGAGGCTGTCCACAGAGTTGCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: STMRSSSTLWRL*RCRGCPQSCRS Trigger: GCTCCTGCAACTCTGTGGACAGCCTCTGCATCTTCACAGTCTCCACAAGGTGCTGCTGCTCCTCATTGTACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS GCA 72 bp | GAGGCTACATTGGTAGTCCTGCTCAGTCGCTCATCATaGATGAGAAAGGGGACTCCGTCAGAGCTGACCATC | + |
|
Preference number: 6 (lower is better) Translates to: EATLVVLLSRSS*MRKGTPSELTI Trigger: GATGGTCAGCTCTGACGGAGTCCCCTTTCTCATGCATGATGAGCGACTGAGCAGGACTACCAATGTAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CCA 72 bp | AGTCTCTGCAGTTCAGCCCAGGAGAAGTCACTGCTGTaGGCTGAGATTCGCTCTGGAAACACAGAGGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: SLCSSAQEKSLL*AEIRSGNTEAT Trigger: TGTAGCCTCTGTGTTTCCAGAGCGAATCTCAGCCCACAGCAGTGACTTCTCCTGGGCTGAACTGCAGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CCA 72 bp | GCACGGTCTTCATCTGGGAGCCAAAGAACCATAGCTTaGGACACGTTTGCACTCAACACAGCCTCCAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ARSSSGSQRTIA*DTFALNTASSV Trigger: GACACTGGAGGCTGTGTTGAGTGCAAACGTGTCCCAAGCTATGGTTCTTTGGCTCCCAGATGAAGACCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS TCA 72 bp | AGAAAGGTTGCCTCTCTAGGAACCAGGTTCCAGCATTaGGTCTCTGCAGTTCAGCCCAGGAGAAGTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RKVASLGTRFQH*VSAVQPRRSHC Trigger: GCAGTGACTTCTCCTGGGCTGAACTGCAGAGACTCAATGCTGGAACCTGGTTCCTAGAGAGGCAACCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CAA 72 bp | CAGAAAGGTTGCCTCTCTAGGAACCAGGTTCCAGCATaGAGTCTCTGCAGTTCAGCCCAGGAGAAGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: QKGCLSRNQVPA*SLCSSAQEKSL Trigger: CAGTGACTTCTCCTGGGCTGAACTGCAGAGACTCAATGCTGGAACCTGGTTCCTAGAGAGGCAACCTTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CAA 72 bp | AGCACGGTCTTCATCTGGGAGCCAAAGAACCATAGCTaGGGACACGTTTGCACTCAACACAGCCTCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: STVFIWEPKNHS*GHVCTQHSLQC Trigger: ACACTGGAGGCTGTGTTGAGTGCAAACGTGTCCCAAGCTATGGTTCTTTGGCTCCCAGATGAAGACCGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CAA 90 bp | CTGCACGTTAGCACGGTCTTCATCTGGGAGCCAAAGAACCATAGCTaGGGACACGTTTGCACTCAACACAGCCTCCAGTGTCTGATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LHVSTVFIWEPKNHS*GHVCTQHSLQCLIH Trigger: GTGAATCAGACACTGGAGGCTGTGTTGAGTGCAAACGTGTCCCAAGCTATGGTTCTTTGGCTCCCAGATGAAGACCGTGCTAACGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CCA 72 bp | GATATTATCCTGGTGCAGGGCCTTGATATCCAATGCTaGCAGGTCTTGATAGGGGAGGTTGAGAAACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DIILVQGLDIQC*QVLIGEVEKLG Trigger: CCCCAGTTTCTCAACCTCCCCTATCAAGACCTGCCAGCATTGGATATCAAGGCCCTGCACCAGGATAATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS TCA 72 bp | GCTTCCTTCAGTAGTTCTTCTAATGCTGGTATGGTCTaGTTCTCAGCCTCCTTCCGATCAGAGCCTGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASFSSSSNAGMV*FSASFRSEPDS Trigger: GCTGTCAGGCTCTGATCGGAAGGAGGCTGAGAATCAGACCATACCAGCATTAGAAGAACTACTGAAGGAAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS TCA 72 bp | ACAGGTTCACTGAGATATTATCCTGGTGCAGGGCCTTaGTATCCAATGCTGGCAGGTCTTGATAGGGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGSLRYYPGAGP*YPMLAGLDRGG Trigger: ACCTCCCCTATCAAGACCTGCCAGCATTGGATATCAAGGCCCTGCACCAGGATAATATCTCAGTGAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CCA 72 bp | AGGACTATCAGGGACCAGTCCATCCAGTGTCCCCAATaGCGGAACAGGAATTCATTGAAGTTGTGCAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: RTIRDQSIQCPQ*RNRNSLKLCRS Trigger: TGATCTGCACAACTTCAATGAATTCCTGTTCCGCCATTGGGGACACTGGATGGACTGGTCCCTGATAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS TCA 72 bp | GAAGAGCCAGGGCTTGTTCACTACAAACAGGTTCACTaGGATATTATCCTGGTGCAGGGCCTTGATATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: EEPGLVHYKQVH*DIILVQGLDIQ Trigger: TTGGATATCAAGGCCCTGCACCAGGATAATATCTCAGTGAACCTGTTTGTAGTGAACAAGCCCTGGCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CCA 72 bp | TTGTTCACTACAAACAGGTTCACTGAGATATTATCCTaGTGCAGGGCCTTGATATCCAATGCTGGCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LFTTNRFTEILS*CRALISNAGRS Trigger: AGACCTGCCAGCATTGGATATCAAGGCCCTGCACCAGGATAATATCTCAGTGAACCTGTTTGTAGTGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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| CDS CCA 72 bp | CTGATTCACAAAAGTATCATAGTATGTGTGGTTTCTTaGGGGTCGGCGCAAGTCAAACATGATGGAAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LIHKSIIVCVVS*GSAQVKHDGKV Trigger: AACCTTTCCATCATGTTTGACTTGCGCCGACCCCCAAGAAACCACACATACTATGATACTTTTGTGAATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019503.14 ENSMUST00000113744.2 |
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