Pregenerated sensors for GDPD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061666Ensembl transcript IDs: ENSMUST00000020804.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCTGGGTCTGCGCTTCAGAGAAGTGAGAGAGATCAGGAGCATGTaGCTCATGCTAAACACGCCCGCAACAGTGTTGTCACCAGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: WLGLRFREVREIRSM*LMLNTPATVLSPAN Trigger: ATTGGCTGGTGACAACACTGTTGCGGGCGTGTTTAGCATGAGCCACATGCTCCTGATCTCTCTCACTTCTCTGAAGCGCAGACCCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR TCA 90 bp | CAACAGTGTTGTCACCAGCCAATCACTATAGGGTTGCCACATCACTaGCAACTCAGACCCAGGATCAGTCTAGTCAAGCCCAAAGGTAAG | + |
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Preference number: 1 (lower is better) Translates to: QQCCHQPITIGLPHH*QLRPRISLVKPKGK Trigger: CTTACCTTTGGGCTTGACTAGACTGATCCTGGGTCTGAGTTGTCAGTGATGTGGCAACCCTATAGTGATTGGCTGGTGACAACACTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR TCA 90 bp | TGCCCGGCTCAGGAATCTTCTTTCCTATGGTTGATCCTGTCTCAGTaGAGGCTAACACATAGTTTGCCTCCAGTCTTTGATTTCAGATTT | + |
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Preference number: 1 (lower is better) Translates to: CPAQESSFLWLILSQ*RLTHSLPPVFDFRF Trigger: AAATCTGAAATCAAAGACTGGAGGCAAACTATGTGTTAGCCTTCACTGAGACAGGATCAACCATAGGAAAGAAGATTCCTGAGCCGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCATGAGGCTGCCCTCCATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATACAGCACACACTGCCTaGCTGCACCTTCGGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: EHEAALHSCAWQAPQQRHTAHTA*LHLRVP Trigger: AGGAACCCGAAGGTGCAGCCAGGCAGTGTGTGCTGT...ATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATGGAGGGCAGCCTCATGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCATGAGGCTGCCCTCCATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATTGCGCTTCAGAGAAGTaGGAGAGATCAGGAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: EHEAALHSCAWQAPQQRHCASEK*ERSGAC Trigger: ACATGCTCCTGATCTCTCTCACTTCTCTGAAGCGCA...ATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATGGAGGGCAGCCTCATGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCATGAGGCTGCCCTCCATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATTTGATCCTGTCTCAGTaGAGGCTAACACATAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: EHEAALHSCAWQAPQQRHLILSQ*RLTHSL Trigger: CAAACTATGTGTTAGCCTTCACTGAGACAGGATCAA...ATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATGGAGGGCAGCCTCATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTATTACAATTTAGACCACAAAGCAACAGAAGGGAGCATGAGGCTGCCCTCCCTGGCCTCAACCCCCTaGTCCTCTTGCCTTAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LYYNLDHKATEGSMRLPSLASTP*SSCLSS Trigger: GGAGCTAAGGCAAGAGGATCAGGGGGTTGAGGCCAG...GGAGGGCAGCCTCATGCTCCCTTCTGTTGCTTTGTGGTCTAAATTGTAATAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCATGAGGCTGCCCTCCATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATGATCTACATTTCAGTTaGCAGTTACCTTCAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: EHEAALHSCAWQAPQQRHDLHFS*QLPSNK Trigger: CTTGTTTGAAGGTAACTGGCAACTGAAATGTAGATC...ATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATGGAGGGCAGCCTCATGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCATGAGGCTGCCCTCCATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATACAATAGTAGAAAGCTaGATCATATGCAGACATCTT | + |
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Preference number: 2 (lower is better) Translates to: EHEAALHSCAWQAPQQRHTIVES*IICRHL Trigger: AAGATGTCTGCATATGATGCAGCTTTCTACTATTGT...ATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATGGAGGGCAGCCTCATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACATCATCCCAGGGGAACCATaGTTAACACACCTTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LGKRRLVLYTEFISQSDIIPGEP*LTHLPS Trigger: TGAGGGAAGGTGTGTTAACCATGGTTCCCCTGGGAT...GATGTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR TCA 90 bp | AATTTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACCTTCTTTCCTATGGTTaGTCCTGTCTCAGTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: NLGKRRLVLYTEFISQSDLLSYG*SCLSEG Trigger: GCCTTCACTGAGACAGGATCAACCATAGGAAAGAAG...GTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACAACCTTTTATCATCCTaGAAATCCCAGGGGAACCAT | + |
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Preference number: 2 (lower is better) Translates to: NLGKRRLVLYTEFISQSDNLLSS*KSQGNH Trigger: ATGGTTCCCCTGGGATTTCCAGGATGATAAAAGGTT...GTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACATCATAACAAACTGTTACTaGCTTGAATTTGCCCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LGKRRLVLYTEFISQSDIITNCY*LEFAPC Trigger: ACAGGGGGCAAATTCAAGCCAGTAACAGTTTGTTAT...GATGTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACATCAGACATCTTGATCAATaGTCTACATTTCAGTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LGKRRLVLYTEFISQSDIRHLDQ*STFQLP Trigger: TGGCAACTGAAATGTAGATCATTGATCAAGATGTCT...GATGTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACATCCACAGATTGGGTTTCTaGGTAATAACAAACTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: LGKRRLVLYTEFISQSDIHRLGF*VITNCY Trigger: GTAACAGTTTGTTATTACTCAGAAACCCAATCTGTG...GATGTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR CCA 72 bp | CCTGATCCTCTTGCCTTAGCTCCCCACCCCGTGTGGTaGCACTGCAGGCTCATGTCACCATGCCCGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: PDPLALAPHPVW*HCRLMSPCPAQ Trigger: CTGAGCCGGGCATGGTGACATGAGCCTGCAGTGCCACCACACGGGGTGGGGAGCTAAGGCAAGAGGATCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR GCA 72 bp | CCTCTTGCCTTAGCTCCCCACCCCGTGTGGTGGCACTaGAGGCTCATGTCACCATGCCCGGCTCAGGAATCT | + |
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Preference number: 3 (lower is better) Translates to: PLALAPHPVWWH*RLMSPCPAQES Trigger: AGATTCCTGAGCCGGGCATGGTGACATGAGCCTGCAGTGCCACCACACGGGGTGGGGAGCTAAGGCAAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR CCA 72 bp | AGAAGGGAGCATGAGGCTGCCCTCCATAGCTGTGCGTaGCAGGCCCCACAGCAGAGACATAATTTAGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: RREHEAALHSCA*QAPQQRHNLGK Trigger: TTTGCCTAAATTATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATGGAGGGCAGCCTCATGCTCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR CAA 90 bp | GAGCATGAGGCTGCCCTCCATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATAGGCTAACACATAGTTaGCCTCCAGTCTTTGATTTC | + |
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Preference number: 3 (lower is better) Translates to: EHEAALHSCAWQAPQQRHRLTHS*PPVFDF Trigger: GAAATCAAAGACTGGAGGCAAACTATGTGTTAGCCT...ATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATGGAGGGCAGCCTCATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAGATCAGGAGCATGTGGCTCATGCTAAACACGCCCGCAACAGTGTTGTCCAAACTGTTACTGGCTaGAATTTGCCCCCTGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: ERDQEHVAHAKHARNSVVQTVTG*NLPPVN Trigger: GTTCACAGGGGGCAAATTCAAGCCAGTAACAGTTTG...GACAACACTGTTGCGGGCGTGTTTAGCATGAGCCACATGCTCCTGATCTCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR TCA 72 bp | TGTCACCAGCCAATCACTATAGGGTTGCCACATCACTaGCAACTCAGACCCAGGATCAGTCTAGTCAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: CHQPITIGLPHH*QLRPRISLVKP Trigger: GGGCTTGACTAGACTGATCCTGGGTCTGAGTTGTCAGTGATGTGGCAACCCTATAGTGATTGGCTGGTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTATTACAATTTAGACCACAAAGCAACAGAAGGGAGCATGAGGCTGCCCTCCGTTACTGGCTTGAATTaGCCCCCTGTGAACAGCACA | + |
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Preference number: 3 (lower is better) Translates to: LYYNLDHKATEGSMRLPSVTGLN*PPVNST Trigger: TGTGCTGTTCACAGGGGGCAAATTCAAGCCAGTAAC...GGAGGGCAGCCTCATGCTCCCTTCTGTTGCTTTGTGGTCTAAATTGTAATAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| 3UTR TCA 72 bp | CAGGAATCTTCTTTCCTATGGTTGATCCTGTCTCAGTaGAGGCTAACACATAGTTTGCCTCCAGTCTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: QESSFLWLILSQ*RLTHSLPPVFD Trigger: ATCAAAGACTGGAGGCAAACTATGTGTTAGCCTTCACTGAGACAGGATCAACCATAGGAAAGAAGATTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR TCA 90 bp | ATTAGTCACAAAGGCCAGGGACAGGTCTGCATGGAGTCACATCGGAAGGCAGAGCCAGCACCTCCGCGGTaGGAGATGTGCCTACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ISHKGQGQVCMESHRKAEPAPPR*EMCLLR Trigger: CCTCAGTAGGCACATCTCTCACCGCGGAGGTGCTGG...CTCTGCCTTCCGATGTGACTCCATGCAGACCTGTCCCTGGCCTTTGTGACTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR TCA 90 bp | ATTAGTCACAAAGGCCAGGGACAGGTCTGCATGGAGTCACATCGGAAGGCAGAGAGAACAAGCCCAGGATaGGCAGAACACGCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ISHKGQGQVCMESHRKAERTSPG*AEHAAG Trigger: GCCTGCAGCGTGTTCTGCTCATCCTGGGCTTGTTCT...CTCTGCCTTCCGATGTGACTCCATGCAGACCTGTCCCTGGCCTTTGTGACTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CCA 90 bp | CATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATAATTTAGGCAAAAGACGTAGAACTGTTCTCGAATaGGCACGAAGGGCAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: HSCAWQAPQQRHNLGKRRRTVLE*ARRARG Trigger: GCCTCTTGCCCTTCGTGCCCATTCGAGAACAGTTCT...ACGTCTTTTGCCTAAATTATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR GCA 90 bp | ATTAGTCACAAAGGCCAGGGACAGGTCTGCATGGAGTCACATCGGAAGGCAGAGATGAGCAGAACACGCTaGAGGCTGAAGAGTATAGGA | + |
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Preference number: 4 (lower is better) Translates to: ISHKGQGQVCMESHRKAEMSRTR*RLKSIG Trigger: TCCTATACTCTTCAGCCTGCAGCGTGTTCTGCTCAT...CTCTGCCTTCCGATGTGACTCCATGCAGACCTGTCCCTGGCCTTTGTGACTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CCA 90 bp | CTTTATTACAATTTAGACCACAAAGCAACAGAAGGGAGCATGAGGCTGCCCTCCCGCTGTTTCTTTCTCTaGTGCAGCAACGCTGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LYYNLDHKATEGSMRLPSRCFFL*CSNAGY Trigger: ATACCCAGCGTTGCTGCACCAGAGAAAGAAACAGCG...GGAGGGCAGCCTCATGCTCCCTTCTGTTGCTTTGTGGTCTAAATTGTAATAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CCA 90 bp | CATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATAATTTAGGCAAAAGACGTCTTGCAAAGGTAAGGTaGGAGCTCACAATATTTGAG | + |
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Preference number: 4 (lower is better) Translates to: HSCAWQAPQQRHNLGKRRLAKVR*ELTIFE Trigger: CTCAAATATTGTGAGCTCCCACCTTACCTTTGCAAG...ACGTCTTTTGCCTAAATTATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CCA 90 bp | CTTTATTACAATTTAGACCACAAAGCAACAGAAGGGAGCATGAGGCTGCCCTCCGCAGGCTCTCTGAAATaGGACATCCAGCTTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LYYNLDHKATEGSMRLPSAGSLK*DIQLAK Trigger: CTTTGCAAGCTGGATGTCCCATTTCAGAGAGCCTGC...GGAGGGCAGCCTCATGCTCCCTTCTGTTGCTTTGTGGTCTAAATTGTAATAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CCA 90 bp | GAGAGAGATCAGGAGCATGTGGCTCATGCTAAACACGCCCGCAACAGTGTTGTCTCATCTTTTGTGATATaGCAGTCCAGTTCTAACATG | + |
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Preference number: 4 (lower is better) Translates to: ERDQEHVAHAKHARNSVVSSFVI*QSSSNM Trigger: CATGTTAGAACTGGACTGCCATATCACAAAAGATGA...GACAACACTGTTGCGGGCGTGTTTAGCATGAGCCACATGCTCCTGATCTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR GCA 90 bp | ATGGTTAACACACCTTCCCTCAGATCTATTCTGGTCATGACTCCTTTGAATGATATGGGACATCCAGCTTaGAAAGGTAAGGTGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: MVNTPSLRSILVMTPLNDMGHPA*KGKVGA Trigger: AGCTCCCACCTTACCTTTGCAAGCTGGATGTCCCAT...ATCATTCAAAGGAGTCATGACCAGAATAGATCTGAGGGAAGGTGTGTTAACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR TCA 90 bp | CTTTATTACAATTTAGACCACAAAGCAACAGAAGGGAGCATGAGGCTGCCCTCCGAGTATAGGAATGTCTaGGTTCTCTTTGTAACACTT | + |
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Preference number: 4 (lower is better) Translates to: LYYNLDHKATEGSMRLPSEYRNV*VLFVTL Trigger: AAGTGTTACAAAGAGAACTCAGACATTCCTATACTC...GGAGGGCAGCCTCATGCTCCCTTCTGTTGCTTTGTGGTCTAAATTGTAATAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR GCA 90 bp | CTTTATTACAATTTAGACCACAAAGCAACAGAAGGGAGCATGAGGCTGCCCTCCTGTGACACTACAACTTaGTCATCTTTTGTGATATGG | + |
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Preference number: 4 (lower is better) Translates to: LYYNLDHKATEGSMRLPSCDTTT*SSFVIW Trigger: CCATATCACAAAAGATGAGCAAGTTGTAGTGTCACA...GGAGGGCAGCCTCATGCTCCCTTCTGTTGCTTTGTGGTCTAAATTGTAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR TCA 90 bp | ATGGTTAACACACCTTCCCTCAGATCTATTCTGGTCATGACTCCTTTGAATGATCTTGCTCATCTTTTGTaGTATGGCAGTCCAGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: MVNTPSLRSILVMTPLNDLAHLL*YGSPVL Trigger: TAGAACTGGACTGCCATATCACAAAAGATGAGCAAG...ATCATTCAAAGGAGTCATGACCAGAATAGATCTGAGGGAAGGTGTGTTAACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CCA 90 bp | TTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACATCCTACAATCTCAGAGTTaGCATTGCCCCACACTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LGKRRLVLYTEFISQSDILQSQS*HCPTLS Trigger: TGACAGTGTGGGGCAATGCCAACTCTGAGATTGTAG...GATGTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR GCA 90 bp | AATTTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACCGTCATCACTCCAGTTaGTCCCAAATCAAAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NLGKRRLVLYTEFISQSDRHHSS*SQIKGS Trigger: AGAGCCTTTGATTTGGGAGCAACTGGAGTGATGACG...GTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CCA 90 bp | AATTTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACCTGGTGCAGCAACGCTaGGTATTTAAGCAACAAGAA | + |
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Preference number: 4 (lower is better) Translates to: NLGKRRLVLYTEFISQSDLVQQR*VFKQQE Trigger: TTCTTGTTGCTTAAATACCCAGCGTTGCTGCACCAG...GTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR TCA 90 bp | AATTTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACCTTTTAGCTTCAGTATaGTGGAGGGCATTGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: NLGKRRLVLYTEFISQSDLLASV*WRALGF Trigger: AAATCCCAATGCCCTCCATCATACTGAAGCTAAAAG...GTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR GCA 90 bp | AATTTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACTGTTTCTTTCTCTGGTaGAGCAACGCTGGGTATTTA | + |
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Preference number: 4 (lower is better) Translates to: NLGKRRLVLYTEFISQSDCFFLW*SNAGYL Trigger: TAAATACCCAGCGTTGCTGCACCAGAGAAAGAAACA...GTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR TCA 90 bp | AATTTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACCAGATGAGAAACTTATaGCCTTTGGATATAGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: NLGKRRLVLYTEFISQSDQMRNL*PLDIVC Trigger: ACACACTATATCCAAAGGTCATAAGTTTCTCATCTG...GTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | GAGCATGAGGCTGCCCTCCATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATATCTCAGAGTTGGCATaGCCCCACACTGTCAGATGT | + |
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Preference number: 5 (lower is better) Translates to: EHEAALHSCAWQAPQQRHISELA*PHTVRC Trigger: ACATCTGACAGTGTGGGGCAATGCCAACTCTGAGAT...ATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATGGAGGGCAGCCTCATGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | GAGCATGAGGCTGCCCTCCATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATACATTGTTGTTCACTTaGATGTCGATGTTAATGGGG | + |
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Preference number: 5 (lower is better) Translates to: EHEAALHSCAWQAPQQRHTLLFT*MSMLMG Trigger: CCCCATTAACATCGACATCAAAGTGAACAACAATGT...ATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATGGAGGGCAGCCTCATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | GAGAGAGATCAGGAGCATGTGGCTCATGCTAAACACGCCCGCAACAGTGTTGTCCCGTCATCACTCCAGTaGCTCCCAAATCAAAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: ERDQEHVAHAKHARNSVVPSSLQ*LPNQRL Trigger: GAGCCTTTGATTTGGGAGCAACTGGAGTGATGACGG...GACAACACTGTTGCGGGCGTGTTTAGCATGAGCCACATGCTCCTGATCTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS TCA 90 bp | TCTCAAGGTTTTCTCCAGCACCTCCGCGGTGAGAGATGTGCCTACTaGGGAATCGCTGTTTCTTTCTCTGGTGCAGCAACGCTGGGTATT | + |
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Preference number: 5 (lower is better) Translates to: SQGFLQHLRGERCAY*GIAVSFSGAATLGI Trigger: AATACCCAGCGTTGCTGCACCAGAGAAAGAAACAGCGATTCCTCAGTAGGCACATCTCTCACCGCGGAGGTGCTGGAGAAAACCTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CCA 90 bp | TGGCAGTCCAGTTCTAACATGTCTGTCCCAATGGTAACTGCGTGCTaGAAGGCAGCCATTGTGTTCTCAAGGTTTTCTCCAGCACCTCCG | + |
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Preference number: 5 (lower is better) Translates to: WQSSSNMSVPMVTAC*KAAIVFSRFSPAPP Trigger: CGGAGGTGCTGGAGAAAACCTTGAGAACACAATGGCTGCCTTCCAGCACGCAGTTACCATTGGGACAGACATGTTAGAACTGGACTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CCA 90 bp | GGGGATCCGGGTATCTTTCCCCTCACACTTGCAGGCTCTCTGAAATaGGACATCCAGCTTGCAAAGGTAAGGTGGGAGCTCACAATATTT | + |
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Preference number: 5 (lower is better) Translates to: GDPGIFPLTLAGSLK*DIQLAKVRWELTIF Trigger: AAATATTGTGAGCTCCCACCTTACCTTTGCAAGCTGGATGTCCCATTTCAGAGAGCCTGCAAGTGTGAGGGGAAAGATACCCGGATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | CATAGCTGTGCGTGGCAGGCCCCACAGCAGAGACATAATTTAGGCAAAAGACGTGCTGGAAGGCAGCCATaGTGTTCTCAAGGTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: HSCAWQAPQQRHNLGKRRAGRQP*CSQGFL Trigger: GAGAAAACCTTGAGAACACAATGGCTGCCTTCCAGC...ACGTCTTTTGCCTAAATTATGTCTCTGCTGTGGGGCCTGCCACGCACAGCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | GAGAGAGATCAGGAGCATGTGGCTCATGCTAAACACGCCCGCAACAGTGTTGTCGGGAGCTCACAATATTaGAGATCAGAGACGTTTACA | + |
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Preference number: 5 (lower is better) Translates to: ERDQEHVAHAKHARNSVVGSSQY*RSETFT Trigger: TGTAAACGTCTCTGATCTCAAATATTGTGAGCTCCC...GACAACACTGTTGCGGGCGTGTTTAGCATGAGCCACATGCTCCTGATCTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | GAGAGAGATCAGGAGCATGTGGCTCATGCTAAACACGCCCGCAACAGTGTTGTCAGTTCTGAGACCTTCTaGATCAGCACATTGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: ERDQEHVAHAKHARNSVVSSETF*ISTLLF Trigger: GAACAACAATGTGCTGATCAAGAAGGTCTCAGAACT...GACAACACTGTTGCGGGCGTGTTTAGCATGAGCCACATGCTCCTGATCTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS TCA 90 bp | ATTCCTCATTTAAAACCCAAACGTACACTTGAATGCCCCGGGCGGTaGGGTGGTCAAATAGAGCTTTCCGCATCAATAAGGTATCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: IPHLKPKRTLECPGR*GGQIELSASIRYQK Trigger: TTTCTGATACCTTATTGATGCGGAAAGCTCTATTTGACCACCTCACCGCCCGGGGCATTCAAGTGTACGTTTGGGTTTTAAATGAGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS GCA 90 bp | CTGAGTTCTCTTTGTAACACTTGTCTACAATCTCAGAGTTGGCATTaGCCCACACTGTCAGATGTTCTCGCTTATACTGCTTCACCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LSSLCNTCLQSQSWH*PTLSDVLAYTASPV Trigger: AACTGGTGAAGCAGTATAAGCGAGAACATCTGACAGTGTGGGGCAATGCCAACTCTGAGATTGTAGACAAGTGTTACAAAGAGAACTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CCA 90 bp | AGGTTTGCATCATGTGACACTACAACTTGCTCATCTTTTGTGATATaGCAGTCCAGTTCTAACATGTCTGTCCCAATGGTAACTGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: RFASCDTTTCSSFVI*QSSSNMSVPMVTAC Trigger: GCACGCAGTTACCATTGGGACAGACATGTTAGAACTGGACTGCCATATCACAAAAGATGAGCAAGTTGTAGTGTCACATGATGCAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | CTTTATTACAATTTAGACCACAAAGCAACAGAAGGGAGCATGAGGCTGCCCTCCTTGACCTCTTCAGGTTaGCATCATGTGACACTACAA | + |
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Preference number: 5 (lower is better) Translates to: LYYNLDHKATEGSMRLPSLTSSG*HHVTLQ Trigger: TTGTAGTGTCACATGATGCAAACCTGAAGAGGTCAA...GGAGGGCAGCCTCATGCTCCCTTCTGTTGCTTTGTGGTCTAAATTGTAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | TTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACATCTCTACAATCTCAGAGTaGGCATTGCCCCACACTGTC | + |
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Preference number: 5 (lower is better) Translates to: LGKRRLVLYTEFISQSDISTISE*ALPHTV Trigger: GACAGTGTGGGGCAATGCCAACTCTGAGATTGTAGA...GATGTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | TTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACATCTCAGAGACGTTTACATaGACCCCAGTTGACCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LGKRRLVLYTEFISQSDISETFT*TPVDLF Trigger: GAAGAGGTCAACTGGGGTCAATGTAAACGTCTCTGA...GATGTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS TCA 90 bp | GCTTTCCGCATCAATAAGGTATCAGAAAGCCAGATGAGAAACTTATaGCCTTTGGATATAGTGTGTGGTTCTTTTAGCTTCAGTATGATG | + |
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Preference number: 5 (lower is better) Translates to: AFRINKVSESQMRNL*PLDIVCGSFSFSMM Trigger: CATCATACTGAAGCTAAAAGAACCACACACTATATCCAAAGGTCATAAGTTTCTCATCTGGCTTTCTGATACCTTATTGATGCGGAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | AATTTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACTTGATCAGCACATTGTaGTTCACTTTGATGTCGATG | + |
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Preference number: 5 (lower is better) Translates to: NLGKRRLVLYTEFISQSDLISTL*FTLMSM Trigger: CATCGACATCAAAGTGAACAACAATGTGCTGATCAA...GTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS-3UTR CAA 90 bp | AATTTAGGCAAAAGACGTCTAGTACTCTATACTGAATTTATCTCCCAATCTGACTTCTTGATCAGCACATaGTTGTTCACTTTGATGTCG | + |
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Preference number: 5 (lower is better) Translates to: NLGKRRLVLYTEFISQSDFLIST*LFTLMS Trigger: CGACATCAAAGTGAACAACAATGTGCTGATCAAGAA...GTCAGATTGGGAGATAAATTCAGTATAGAGTACTAGACGTCTTTTGCCTAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS TCA 72 bp | TTTCTCCAGCACCTCCGCGGTGAGAGATGTGCCTACTaGGGAATCGCTGTTTCTTTCTCTGGTGCAGCAACG | + |
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Preference number: 6 (lower is better) Translates to: FLQHLRGERCAY*GIAVSFSGAAT Trigger: CGTTGCTGCACCAGAGAAAGAAACAGCGATTCCTCAGTAGGCACATCTCTCACCGCGGAGGTGCTGGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS GCA 72 bp | TCAGCAAGGGGATCCGGGTATCTTTCCCCTCACACTTaGAGGCTCTCTGAAATGGGACATCCAGCTTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SARGSGYLSPHT*RLSEMGHPACK Trigger: TTTGCAAGCTGGATGTCCCATTTCAGAGAGCCTGCAAGTGTGAGGGGAAAGATACCCGGATCCCCTTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CCA 72 bp | GGTATCTTTCCCCTCACACTTGCAGGCTCTCTGAAATaGGACATCCAGCTTGCAAAGGTAAGGTGGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: GIFPLTLAGSLK*DIQLAKVRWEL Trigger: GAGCTCCCACCTTACCTTTGCAAGCTGGATGTCCCATTTCAGAGAGCCTGCAAGTGTGAGGGGAAAGATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS GCA 72 bp | CCGGTGAAGAACAAGCCCAGGATGAGCAGAACACGCTaGAGGCTGAAGAGTATAGGAATGTCTGAGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PVKNKPRMSRTR*RLKSIGMSEFS Trigger: AGAGAACTCAGACATTCCTATACTCTTCAGCCTGCAGCGTGTTCTGCTCATCCTGGGCTTGTTCTTCACCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS TCA 72 bp | TTAAAACCCAAACGTACACTTGAATGCCCCGGGCGGTaGGGTGGTCAAATAGAGCTTTCCGCATCAATAAGG | + |
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Preference number: 6 (lower is better) Translates to: LKPKRTLECPGR*GGQIELSASIR Trigger: CCTTATTGATGCGGAAAGCTCTATTTGACCACCTCACCGCCCGGGGCATTCAAGTGTACGTTTGGGTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS GCA 72 bp | GCATTGCCCCACACTGTCAGATGTTCTCGCTTATACTaGTTCACCAGTTCTGAGACCTTCTTGATCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: ALPHTVRCSRLY*FTSSETFLIST Trigger: TGTGCTGATCAAGAAGGTCTCAGAACTGGTGAAGCAGTATAAGCGAGAACATCTGACAGTGTGGGGCAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS TCA 72 bp | TACTCGTATTCCTCATTTAAAACCCAAACGTACACTTaGATGCCCCGGGCGGTGAGGTGGTCAAATAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: YSYSSFKTQTYT*MPRAVRWSNRA Trigger: AGCTCTATTTGACCACCTCACCGCCCGGGGCATTCAAGTGTACGTTTGGGTTTTAAATGAGGAATACGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS GCA 72 bp | ATGTGCCTACTGAGGAATCGCTGTTTCTTTCTCTGGTaGAGCAACGCTGGGTATTTAAGCAACAAGAACGAG | + |
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Preference number: 6 (lower is better) Translates to: MCLLRNRCFFLW*SNAGYLSNKNE Trigger: CTCGTTCTTGTTGCTTAAATACCCAGCGTTGCTGCACCAGAGAAAGAAACAGCGATTCCTCAGTAGGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS GCA 72 bp | TCCAGTTCTAACATGTCTGTCCCAATGGTAACTGCGTaGTGGAAGGCAGCCATTGTGTTCTCAAGGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSSNMSVPMVTA*WKAAIVFSRFS Trigger: AGAAAACCTTGAGAACACAATGGCTGCCTTCCAGCACGCAGTTACCATTGGGACAGACATGTTAGAACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CCA 72 bp | GAGATGTGCCTACTGAGGAATCGCTGTTTCTTTCTCTaGTGCAGCAACGCTGGGTATTTAAGCAACAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: EMCLLRNRCFFL*CSNAGYLSNKN Trigger: GTTCTTGTTGCTTAAATACCCAGCGTTGCTGCACCAGAGAAAGAAACAGCGATTCCTCAGTAGGCACATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CCA 72 bp | AGTTCTAACATGTCTGTCCCAATGGTAACTGCGTGCTaGAAGGCAGCCATTGTGTTCTCAAGGTTTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSNMSVPMVTAC*KAAIVFSRFSP Trigger: TGGAGAAAACCTTGAGAACACAATGGCTGCCTTCCAGCACGCAGTTACCATTGGGACAGACATGTTAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CAA 72 bp | TCTGAGACCTTCTTGATCAGCACATTGTTGTTCACTTaGATGTCGATGTTAATGGGGGTCTCAGGGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SETFLISTLLFT*MSMLMGVSGKA Trigger: GGCCTTCCCTGAGACCCCCATTAACATCGACATCAAAGTGAACAACAATGTGCTGATCAAGAAGGTCTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CAA 90 bp | TTCACCAGTTCTGAGACCTTCTTGATCAGCACATTGTTGTTCACTTaGATGTCGATGTTAATGGGGGTCTCAGGGAAGGCCTCAAACACT | + |
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Preference number: 6 (lower is better) Translates to: FTSSETFLISTLLFT*MSMLMGVSGKASNT Trigger: AGTGTTTGAGGCCTTCCCTGAGACCCCCATTAACATCGACATCAAAGTGAACAACAATGTGCTGATCAAGAAGGTCTCAGAACTGGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CAA 90 bp | TTATACTGCTTCACCAGTTCTGAGACCTTCTTGATCAGCACATTGTaGTTCACTTTGATGTCGATGTTAATGGGGGTCTCAGGGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LYCFTSSETFLISTL*FTLMSMLMGVSGKA Trigger: GGCCTTCCCTGAGACCCCCATTAACATCGACATCAAAGTGAACAACAATGTGCTGATCAAGAAGGTCTCAGAACTGGTGAAGCAGTATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CAA 90 bp | CGCTTATACTGCTTCACCAGTTCTGAGACCTTCTTGATCAGCACATaGTTGTTCACTTTGATGTCGATGTTAATGGGGGTCTCAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RLYCFTSSETFLIST*LFTLMSMLMGVSGK Trigger: CTTCCCTGAGACCCCCATTAACATCGACATCAAAGTGAACAACAATGTGCTGATCAAGAAGGTCTCAGAACTGGTGAAGCAGTATAAGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS GCA 72 bp | CTTAAGCTTGGTTGGGTAGTCCGTCATCACTCCAGTTaGTCCCAAATCAAAGGCTCTTTTGTACTCGTATTC | + |
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Preference number: 6 (lower is better) Translates to: LKLGWVVRHHSS*SQIKGSFVLVF Trigger: GAATACGAGTACAAAAGAGCCTTTGATTTGGGAGCAACTGGAGTGATGACGGACTACCCAACCAAGCTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CCA 72 bp | GAGGAATCGCTGTTTCTTTCTCTGGTGCAGCAACGCTaGGTATTTAAGCAACAAGAACGAGGTGACCAAATA | + |
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Preference number: 6 (lower is better) Translates to: EESLFLSLVQQR*VFKQQERGDQI Trigger: TATTTGGTCACCTCGTTCTTGTTGCTTAAATACCCAGCGTTGCTGCACCAGAGAAAGAAACAGCGATTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS GCA 72 bp | CTTTGTAACACTTGTCTACAATCTCAGAGTTGGCATTaGCCCACACTGTCAGATGTTCTCGCTTATACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LCNTCLQSQSWH*PTLSDVLAYTA Trigger: AGCAGTATAAGCGAGAACATCTGACAGTGTGGGGCAATGCCAACTCTGAGATTGTAGACAAGTGTTACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CAA 72 bp | GGGAGCTCACAATATTTGAGATCAGAGACGTTTACATaGACCCCAGTTGACCTCTTCAGGTTTGCATCATGT | + |
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Preference number: 6 (lower is better) Translates to: GSSQYLRSETFT*TPVDLFRFASC Trigger: ACATGATGCAAACCTGAAGAGGTCAACTGGGGTCAATGTAAACGTCTCTGATCTCAAATATTGTGAGCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CAA 72 bp | TGCTTCACCAGTTCTGAGACCTTCTTGATCAGCACATaGTTGTTCACTTTGATGTCGATGTTAATGGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: CFTSSETFLIST*LFTLMSMLMGV Trigger: GACCCCCATTAACATCGACATCAAAGTGAACAACAATGTGCTGATCAAGAAGGTCTCAGAACTGGTGAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CAA 90 bp | GTCAGATGTTCTCGCTTATACTGCTTCACCAGTTCTGAGACCTTCTaGATCAGCACATTGTTGTTCACTTTGATGTCGATGTTAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: VRCSRLYCFTSSETF*ISTLLFTLMSMLMG Trigger: CCCCATTAACATCGACATCAAAGTGAACAACAATGTGCTGATCAAGAAGGTCTCAGAACTGGTGAAGCAGTATAAGCGAGAACATCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CCA 72 bp | AGTTCTCTTTGTAACACTTGTCTACAATCTCAGAGTTaGCATTGCCCCACACTGTCAGATGTTCTCGCTTAT | + |
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Preference number: 6 (lower is better) Translates to: SSLCNTCLQSQS*HCPTLSDVLAY Trigger: ATAAGCGAGAACATCTGACAGTGTGGGGCAATGCCAACTCTGAGATTGTAGACAAGTGTTACAAAGAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CAA 72 bp | TTCACCAGTTCTGAGACCTTCTTGATCAGCACATTGTaGTTCACTTTGATGTCGATGTTAATGGGGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: FTSSETFLISTL*FTLMSMLMGVS Trigger: TGAGACCCCCATTAACATCGACATCAAAGTGAACAACAATGTGCTGATCAAGAAGGTCTCAGAACTGGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CAA 72 bp | TCTCGCTTATACTGCTTCACCAGTTCTGAGACCTTCTaGATCAGCACATTGTTGTTCACTTTGATGTCGATG | + |
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Preference number: 6 (lower is better) Translates to: SRLYCFTSSETF*ISTLLFTLMSM Trigger: CATCGACATCAAAGTGAACAACAATGTGCTGATCAAGAAGGTCTCAGAACTGGTGAAGCAGTATAAGCGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS TCA 72 bp | TGTCAGATGTTCTCGCTTATACTGCTTCACCAGTTCTaGGACCTTCTTGATCAGCACATTGTTGTTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: CQMFSLILLHQF*DLLDQHIVVHF Trigger: AAAGTGAACAACAATGTGCTGATCAAGAAGGTCTCAGAACTGGTGAAGCAGTATAAGCGAGAACATCTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS CCA 72 bp | TCATGTGACACTACAACTTGCTCATCTTTTGTGATATaGCAGTCCAGTTCTAACATGTCTGTCCCAATGGTA | + |
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Preference number: 6 (lower is better) Translates to: SCDTTTCSSFVI*QSSSNMSVPMV Trigger: TACCATTGGGACAGACATGTTAGAACTGGACTGCCATATCACAAAAGATGAGCAAGTTGTAGTGTCACATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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| CDS TCA 72 bp | ATCAATAAGGTATCAGAAAGCCAGATGAGAAACTTATaGCCTTTGGATATAGTGTGTGGTTCTTTTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: INKVSESQMRNL*PLDIVCGSFSF Trigger: GAAGCTAAAAGAACCACACACTATATCCAAAGGTCATAAGTTTCTCATCTGGCTTTCTGATACCTTATTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020804.8 |
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