Pregenerated sensors for GDNF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022144Ensembl transcript IDs: ENSMUST00000022744.5
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACTGGGTGGGGCAGCCTGCTCCCATTCGAACCTGCTCGAGATGCTaGGTTCTCCAGGGATTCCCCCAAGAGCTAGAGGCTGTGTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: DWVGQPAPIRTCSRC*VLQGFPQELEAVSG Trigger: TCCAGACACAGCCTCTAGCTCTTGGGGGAATCCCTGGAGAACTCAGCATCTCGAGCAGGTTCGAATGGGAGCAGGCTGCCCCACCCAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 90 bp | GAACCGTCGCAAACTTTACCCTGCTGCGGACTGGGTGGGGCAGCCTaGTCCCATTCGAACCTGCTCGAGATGCTGAGTTCTCCAGGGATT | + |
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Preference number: 1 (lower is better) Translates to: EPSQTLPCCGLGGAA*SHSNLLEMLSSPGI Trigger: AATCCCTGGAGAACTCAGCATCTCGAGCAGGTTCGAATGGGAGCAGGCTGCCCCACCCAGTCCGCAGCAGGGTAAAGTTTGCGACGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 90 bp | GCATACGTAGCTCCACTTCCCAGTCCTGCAGAGGGTGTGGAACCATaGGAAACGTGGGTCTTTAGGGCCACGGAAGGGGAAAGGATACCT | + |
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Preference number: 1 (lower is better) Translates to: AYVAPLPSPAEGVEP*ETWVFRATEGERIP Trigger: AGGTATCCTTTCCCCTTCCGTGGCCCTAAAGACCCACGTTTCGCATGGTTCCACACCCTCTGCAGGACTGGGAAGTGGAGCTACGTATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 90 bp | GACACCAGCCCTGAGCTTCTGGTGACATCAGCTGCCACCCTGAAGTaGTCAGACGGCTGTTCTCACTCCTATCCAGTTTTCTGTAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: DTSPELLVTSAATLK*SDGCSHSYPVFCSW Trigger: CCAGCTACAGAAAACTGGATAGGAGTGAGAACAGCCGTCTGAGCACTTCAGGGTGGCAGCTGATGTCACCAGAAGCTCAGGGCTGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR CCA 90 bp | GACTCAAGGCATGACCTGTTTGTTGGCTGCCAGACAAGGACATTATaGGGTGCAGGGAGAGTTGCCATTCCCACCCTCTGCTTCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: DSRHDLFVGCQTRTL*GAGRVAIPTLCFFP Trigger: AGGGAAGAAGCAGAGGGTGGGAATGGCAACTCTCCCTGCACCCCATAATGTCCTTGTCTGGCAGCCAACAAACAGGTCATGCCTTGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR CCA 90 bp | GCTCCACTTCCCAGTCCTGCAGAGGGTGTGGAACCATGCGAAACGTaGGTCTTTAGGGCCACGGAAGGGGAAAGGATACCTAGTAACTTT | + |
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Preference number: 1 (lower is better) Translates to: APLPSPAEGVEPCET*VFRATEGERIPSNF Trigger: AAAGTTACTAGGTATCCTTTCCCCTTCCGTGGCCCTAAAGACCCACGTTTCGCATGGTTCCACACCCTCTGCAGGACTGGGAAGTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR TCA 90 bp | CCAAGACCACAGGAAGTCAGAGGATCAGAAGGCCAAGGTCGTCCTTaGCCAAGCAGTAAGTTCAAGGTCAGCCTAGGCTACAGGAGATCC | + |
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Preference number: 1 (lower is better) Translates to: PRPQEVRGSEGQGRP*PSSKFKVSLGYRRS Trigger: GGATCTCCTGTAGCCTAGGCTGACCTTGAACTTACTGCTTGGTCAAGGACGACCTTGGCCTTCTGATCCTCTGACTTCCTGTGGTCTTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR TCA 90 bp | AGGGAGAGTTGCCATTCCCACCCTCTGCTTCTTCCCTCCAAACAATaGGGGAGGGCCTCTTCTTTGTTCTATGGCCAGTCAGATGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: RESCHSHPLLLPSKQ*GRASSLFYGQSDVS Trigger: AGAGACATCTGACTGGCCATAGAACAAAGAAGAGGCCCTCCCTCATTGTTTGGAGGGAAGAAGCAGAGGGTGGGAATGGCAACTCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR TCA 90 bp | GTTAAACCCTGGCTGCCTGTCAGGGGCCTTCATTGCACTTTCAGGTaGCAATATGTTCAGGGCTTCCAAGGGCAGTTCAGCCTTCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: VKPWLPVRGLHCTFR*QYVQGFQGQFSLLN Trigger: ATTCAGAAGGCTGAACTGCCCTTGGAAGCCCTGAACATATTGTCACCTGAAAGTGCAATGAAGGCCCCTGACAGGCAGCCAGGGTTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 90 bp | AAACACGTGAAAACAAACCACAGGAGATACACTGGCTTGGTTCTTTaGATGCATCCACGACTCGGACCGCCATCGGTGACCATGGACTGT | + |
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Preference number: 1 (lower is better) Translates to: KHVKTNHRRYTGLVL*MHPRLGPPSVTMDC Trigger: ACAGTCCATGGTCACCGATGGCGGTCCGAGTCGTGGATGCATGCAAAGAACCAAGCCAGTGTATCTCCTGTGGTTTGTTTTCACGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 90 bp | TTCCCCATTGGCTCTCCTATGAGAATGCTGCCGAAAACCACAACTTaGTTCCTGTTTCTGAGGGCACGAAGGAGATGCCTCCAGGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: FPIGSPMRMLPKTTT*FLFLRARRRCLQVC Trigger: ACAAACCTGGAGGCATCTCCTTCGTGCCCTCAGAAACAGGAAGCAAGTTGTGGTTTTCGGCAGCATTCTCATAGGAGAGCCAATGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR TCA 90 bp | TCAGGTGACAATATGTTCAGGGCTTCCAAGGGCAGTTCAGCCTTCTaGATGCGTGGTTATGATATTGCCCATGATGAAGGGGGAAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SGDNMFRASKGSSAF*MRGYDIAHDEGGKR Trigger: TCTTTTTCCCCCTTCATCATGGGCAATATCATAACCACGCATTCAGAAGGCTGAACTGCCCTTGGAAGCCCTGAACATATTGTCACCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 90 bp | ACAAACGACCGAGACATCAGAGAGGTCAGAACTTCCAAAGAAGTGTaGTCTTTACTGGGGCAGATGCTGATCACAACAGTAAAGAACCGT | + |
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Preference number: 1 (lower is better) Translates to: TNDRDIREVRTSKEV*SLLGQMLITTVKNR Trigger: ACGGTTCTTTACTGTTGTGATCAGCATCTGCCCCAGTAAAGAGCACACTTCTTTGGAAGTTCTGACCTCTCTGATGTCTCGGTCGTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 90 bp | TCAATAAATATCTTCTCTATATCTCTGTATTTGAAACAGATGCATTaGATCGAGGAGCTTCTGTGGTCACTGGTGACCACGCATGAACGG | + |
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Preference number: 1 (lower is better) Translates to: SINIFSISLYLKQMH*IEELLWSLVTTHER Trigger: CCGTTCATGCGTGGTCACCAGTGACCACAGAAGCTCCTCGATGCAATGCATCTGTTTCAAATACAGAGATATAGAGAAGATATTTATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTGGTGACATCAGCTGCCACCCTGAAGTGCTCAGACGGCTGTTCTCACTCCTCTTCTTCTGCCTCTaGCTCCGCCATCTTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ASGDISCHPEVLRRLFSLLFFCL*LRHLGP Trigger: AGGACCAAGATGGCGGAGGCAGAGGCAGAAGAAGAG...GAGTGAGAACAGCCGTCTGAGCACTTCAGGGTGGCAGCTGATGTCACCAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTGGTGACATCAGCTGCCACCCTGAAGTGCTCAGACGGCTGTTCTCACTCACCAGGCTCCCACGGTaGCTACCTTCCTCCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: ASGDISCHPEVLRRLFSLTRLPR*LPSSFF Trigger: AAAGAAGGAGGAAGGTAGCCACCGTGGGAGCCTGGT...GAGTGAGAACAGCCGTCTGAGCACTTCAGGGTGGCAGCTGATGTCACCAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR TCA 90 bp | AGACAAGGACATTATGGGGTGCAGGGAGAGTTGCCATTCCCACCCTCTGCTTCTTCGGACCGCCATCGGTaGCCATGGACTGTATCAGAT | + |
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Preference number: 2 (lower is better) Translates to: RQGHYGVQGELPFPPSASSDRHR*PWTVSD Trigger: ATCTGATACAGTCCATGGTCACCGATGGCGGTCCGA...AGAAGCAGAGGGTGGGAATGGCAACTCTCCCTGCACCCCATAATGTCCTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR CAA 90 bp | GGCGTCTTCAAACACGTGAAAACAAACCACAGGAGATACACTGGCTaGGTTCTTTGCATGCATCCACGACTCGGACCGCCATCGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: GVFKHVKTNHRRYTG*VLCMHPRLGPPSVT Trigger: GGTCACCGATGGCGGTCCGAGTCGTGGATGCATGCAAAGAACCAAGCCAGTGTATCTCCTGTGGTTTGTTTTCACGTGTTTGAAGACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAAGGACATTATGGGGTGCAGGGAGAGTTGCCATTCCCACCCTCTGCTTCTCTGCCTCCGCCATCTTaGTCCTTATCTTCCACTCTG | + |
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Preference number: 2 (lower is better) Translates to: RQGHYGVQGELPFPPSASLPPPS*SLSSTL Trigger: CAGAGTGGAAGATAAGGACCAAGATGGCGGAGGCAG...AGAAGCAGAGGGTGGGAATGGCAACTCTCCCTGCACCCCATAATGTCCTTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR CAA 90 bp | CAAACACGTGAAAACAAACCACAGGAGATACACTGGCTTGGTTCTTaGCATGCATCCACGACTCGGACCGCCATCGGTGACCATGGACTG | + |
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Preference number: 2 (lower is better) Translates to: QTRENKPQEIHWLGS*HASTTRTAIGDHGL Trigger: CAGTCCATGGTCACCGATGGCGGTCCGAGTCGTGGATGCATGCAAAGAACCAAGCCAGTGTATCTCCTGTGGTTTGTTTTCACGTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGAGGGGGAGGGAAATGCTGAAATCTGTGGCAGTTAGTGAAGGACTGCCTTTCTGTGGTCACTGGTaGCCACGCATGAACGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: RKRGREMLKSVAVSEGLPFCGHW*PRMNGA Trigger: AGCTCCGTTCATGCGTGGTCACCAGTGACCACAGAA...AGGCAGTCCTTCACTAACTGCCACAGATTTCAGCATTTCCCTCCCCCTCTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGTTAAACCCTGGCTGCCTGTCAGGGGCCTTCATTGCACTTTCAGGTGACGCATGGATGAAGCCCTaGATTCTATACTTAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GLLNPGCLSGAFIALSGDAWMKP*ILYLVL Trigger: CAGGACTAAGTATAGAATTCAGGGCTTCATCCATGC...GTCACCTGAAAGTGCAATGAAGGCCCCTGACAGGCAGCCAGGGTTTAACAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR TCA 90 bp | GAACTCAATGGGCAGTGGAGCTGGGGCCTTGCTGCTCAGATGGATAGAAGAGGAGTTGCCTGGCATGGATaGAGCCCTGAATTCTATACT | + |
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Preference number: 2 (lower is better) Translates to: ELNGQWSWGLAAQMDRRGVAWHG*SPEFYT Trigger: AGTATAGAATTCAGGGCTTCATCCATGCCAGGCAAC...TCCTCTTCTATCCATCTGAGCAGCAAGGCCCCAGCTCCACTGCCCATTGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR CAA 90 bp | TTTCCCCATTGGCTCTCCTATGAGAATGCTGCCGAAAACCACAACTaGCTTCCTGTTTCTGAGGGCACGAAGGAGATGCCTCCAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: FPHWLSYENAAENHN*LPVSEGTKEMPPGL Trigger: CAAACCTGGAGGCATCTCCTTCGTGCCCTCAGAAACAGGAAGCAAGTTGTGGTTTTCGGCAGCATTCTCATAGGAGAGCCAATGGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR TCA 90 bp | AGACAAGGACATTATGGGGTGCAGGGAGAGTTGCCATTCCCACCCTCTGCTTCTTGTAGTGACAAGAGGTaGCACCGGAATCGTCACATT | + |
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Preference number: 2 (lower is better) Translates to: RQGHYGVQGELPFPPSASCSDKR*HRNRHI Trigger: AATGTGACGATTCCGGTGTCACCTCTTGTCACTACA...AGAAGCAGAGGGTGGGAATGGCAACTCTCCCTGCACCCCATAATGTCCTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR TCA 90 bp | TTACTGGGGCAGATGCTGATCACAACAGTAAAGAACCGTCGCAAACTTTACCCTACCTGCTCGAGATGCTaGGTTCTCCAGGGATTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LLGQMLITTVKNRRKLYPTCSRC*VLQGFP Trigger: GGGGAATCCCTGGAGAACTCAGCATCTCGAGCAGGT...AGGGTAAAGTTTGCGACGGTTCTTTACTGTTGTGATCAGCATCTGCCCCAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR CCA 90 bp | GAACTCAATGGGCAGTGGAGCTGGGGCCTTGCTGCTCAGATGGATAGAAGAGGAATCGTCACATTTCCCTaGCGTCTTCAAACACGTGAA | + |
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Preference number: 2 (lower is better) Translates to: ELNGQWSWGLAAQMDRRGIVTFP*RLQTRE Trigger: TTCACGTGTTTGAAGACGCCAGGGAAATGTGACGAT...TCCTCTTCTATCCATCTGAGCAGCAAGGCCCCAGCTCCACTGCCCATTGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR GCA 90 bp | CCACGCATGAACGGAGCTGTGTATGTAACATCCGTCTTTGTAAACCAACAGGCCTCTTTTTATCGTCTCTaGCTTTGTCCTCCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: PRMNGAVYVTSVFVNQQASFYRL*LCPPHP Trigger: GGGGTGGGGAGGACAAAGGCAGAGACGATAAAAAGA...GGCCTGTTGGTTTACAAAGACGGATGTTACATACACAGCTCCGTTCATGCGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR GCA 90 bp | AGACAAGGACATTATGGGGTGCAGGGAGAGTTGCCATTCCCACCCTCTGCTTCTTTGAAACAGATGCATTaGATCGAGGAGCTTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RQGHYGVQGELPFPPSASLKQMH*IEELLW Trigger: CCACAGAAGCTCCTCGATGCAATGCATCTGTTTCAA...AGAAGCAGAGGGTGGGAATGGCAACTCTCCCTGCACCCCATAATGTCCTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR CAA 90 bp | GGGCTTCCAAGGGCAGTTCAGCCTTCTGAATGCGTGGTTATGATATaGCCCATGATGAAGGGGGAAAAAGAGTTGAACTCAATGGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GLPRAVQPSECVVMI*PMMKGEKELNSMGS Trigger: ACTGCCCATTGAGTTCAACTCTTTTTCCCCCTTCATCATGGGCAATATCATAACCACGCATTCAGAAGGCTGAACTGCCCTTGGAAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR TCA 90 bp | TTACTGGGGCAGATGCTGATCACAACAGTAAAGAACCGTCGCAAACTTTACCCTCAGGATTCTCTGGAGTaGACAGAGGGTCTGGAACGA | + |
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Preference number: 2 (lower is better) Translates to: LLGQMLITTVKNRRKLYPQDSLE*TEGLER Trigger: TCGTTCCAGACCCTCTGTTCACTCCAGAGAATCCTG...AGGGTAAAGTTTGCGACGGTTCTTTACTGTTGTGATCAGCATCTGCCCCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR GCA 90 bp | CCTCCAAACAATGAGGGAGGGCCTCTTCTTTGTTCTATGGCCAGTCAGATGTCTCTTTTTCTCTTCTTCTaGCTCTGCCTCCGCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: PPNNEGGPLLCSMASQMSLFLFF*LCLRHL Trigger: AAGATGGCGGAGGCAGAGGCAGAAGAAGAGAAAAAG...AGACATCTGACTGGCCATAGAACAAAGAAGAGGCCCTCCCTCATTGTTTGGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAAACAATGAGGGAGGGCCTCTTCTTTGTTCTATGGCCAGTCAGATGTCTCCTTATCTTCCACTCTaGGCAAACATTTCCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: PPNNEGGPLLCSMASQMSPYLPL*ANISWE Trigger: TTCCCAGGAAATGTTTGCCCAGAGTGGAAGATAAGG...AGACATCTGACTGGCCATAGAACAAAGAAGAGGCCCTCCCTCATTGTTTGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR CCA 90 bp | TTACTGGGGCAGATGCTGATCACAACAGTAAAGAACCGTCGCAAACTTTACCCTCCACAGGAGATACACTaGCTTGGTTCTTTGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: LLGQMLITTVKNRRKLYPPQEIH*LGSLHA Trigger: TGCATGCAAAGAACCAAGCCAGTGTATCTCCTGTGG...AGGGTAAAGTTTGCGACGGTTCTTTACTGTTGTGATCAGCATCTGCCCCAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR GCA 90 bp | TTACTGGGGCAGATGCTGATCACAACAGTAAAGAACCGTCGCAAACTTTACCCTGTTCAGCCTTCTGAATaGGTGGTTATGATATTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LLGQMLITTVKNRRKLYPVQPSE*VVMILP Trigger: GGGCAATATCATAACCACGCATTCAGAAGGCTGAAC...AGGGTAAAGTTTGCGACGGTTCTTTACTGTTGTGATCAGCATCTGCCCCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAGGGGGAGGGAAATGCTGAAATCTGTGGCAGTTAGTGAAGGACTGCCTGTATCAGATAAACACTaGCAACAGCTAAGTAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: RKRGREMLKSVAVSEGLPVSDKH*QQLSKD Trigger: GTCCTTACTTAGCTGTTGCCAGTGTTTATCTGATAC...AGGCAGTCCTTCACTAACTGCCACAGATTTCAGCATTTCCCTCCCCCTCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR GCA 90 bp | AATAAAGTTTGTAGAGAACTTTGGTTGTATAACACAAACGACCGAGACATCAGAGCTTGGTTCTTTGCATaGATCCACGACTCGGACCGC | + |
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Preference number: 2 (lower is better) Translates to: NKVCRELWLYNTNDRDIRAWFFA*IHDSDR Trigger: GCGGTCCGAGTCGTGGATGCATGCAAAGAACCAAGC...TCTGATGTCTCGGTCGTTTGTGTTATACAACCAAAGTTCTCTACAAACTTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR TCA 90 bp | AATAAAGTTTGTAGAGAACTTTGGTTGTATAACACAAACGACCGAGACATCAGACTGAGATGGCCCTCCTaGCCCTTTCCTTTAGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: NKVCRELWLYNTNDRDIRLRWPS*PFPLAD Trigger: ATCTGCTAAAGGAAAGGGTCAGGAGGGCCATCTCAG...TCTGATGTCTCGGTCGTTTGTGTTATACAACCAAAGTTCTCTACAAACTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 72 bp | GCTCCACTTCCCAGTCCTGCAGAGGGTGTGGAACCATaGGAAACGTGGGTCTTTAGGGCCACGGAAGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: APLPSPAEGVEP*ETWVFRATEGE Trigger: TTCCCCTTCCGTGGCCCTAAAGACCCACGTTTCGCATGGTTCCACACCCTCTGCAGGACTGGGAAGTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR CCA 72 bp | GTAAAGAACCGTCGCAAACTTTACCCTGCTGCGGACTaGGTGGGGCAGCCTGCTCCCATTCGAACCTGCTCG | + |
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Preference number: 3 (lower is better) Translates to: VKNRRKLYPAAD*VGQPAPIRTCS Trigger: CGAGCAGGTTCGAATGGGAGCAGGCTGCCCCACCCAGTCCGCAGCAGGGTAAAGTTTGCGACGGTTCTTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 72 bp | CAAACTTTACCCTGCTGCGGACTGGGTGGGGCAGCCTaGTCCCATTCGAACCTGCTCGAGATGCTGAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: QTLPCCGLGGAA*SHSNLLEMLSS Trigger: AGAACTCAGCATCTCGAGCAGGTTCGAATGGGAGCAGGCTGCCCCACCCAGTCCGCAGCAGGGTAAAGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 72 bp | GAGCCCTGGCAAAGGACAAGGCAGATGGCCTCTCCCTaGACAGTTCCCCTATGTTCTCCTGTCTGTGTAACC | + |
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Preference number: 3 (lower is better) Translates to: EPWQRTRQMASP*TVPLCSPVCVT Trigger: GGTTACACAGACAGGAGAACATAGGGGAACTGTGCAGGGAGAGGCCATCTGCCTTGTCCTTTGCCAGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 72 bp | AGAGAGCAGCGCATACGTAGCTCCACTTCCCAGTCCTaGAGAGGGTGTGGAACCATGCGAAACGTGGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: REQRIRSSTSQS*RGCGTMRNVGL Trigger: AAGACCCACGTTTCGCATGGTTCCACACCCTCTGCAGGACTGGGAAGTGGAGCTACGTATGCGCTGCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 72 bp | GATCACAACAGTAAAGAACCGTCGCAAACTTTACCCTaGTGCGGACTGGGTGGGGCAGCCTGCTCCCATTCG | + |
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Preference number: 3 (lower is better) Translates to: DHNSKEPSQTLP*CGLGGAACSHS Trigger: CGAATGGGAGCAGGCTGCCCCACCCAGTCCGCAGCAGGGTAAAGTTTGCGACGGTTCTTTACTGTTGTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR CCA 72 bp | TCAATGGGCAGTGGAGCTGGGGCCTTGCTGCTCAGATaGATAGAAGAGGAGATGCAAACAGGTGGCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: SMGSGAGALLLR*IEEEMQTGGSP Trigger: GGGACTGCCACCTGTTTGCATCTCCTCTTCTATCCATCTGAGCAGCAAGGCCCCAGCTCCACTGCCCATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR-3UTR CAA 90 bp | GAACTCAATGGGCAGTGGAGCTGGGGCCTTGCTGCTCAGATGGATAGAAGAGGATTATCGTCTCTGCCTTaGTCCTCCCCACCCCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: ELNGQWSWGLAAQMDRRGLSSLP*SSPPPF Trigger: GAAAGGGGGTGGGGAGGACAAAGGCAGAGACGATAA...TCCTCTTCTATCCATCTGAGCAGCAAGGCCCCAGCTCCACTGCCCATTGAGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR TCA 72 bp | TGGCTGCCTGTCAGGGGCCTTCATTGCACTTTCAGGTaGCAATATGTTCAGGGCTTCCAAGGGCAGTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: WLPVRGLHCTFR*QYVQGFQGQFS Trigger: GCTGAACTGCCCTTGGAAGCCCTGAACATATTGTCACCTGAAAGTGCAATGAAGGCCCCTGACAGGCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| 3UTR GCA 72 bp | CCTGAGCTTCTGGTGACATCAGCTGCCACCCTGAAGTaGTCAGACGGCTGTTCTCACTCCTATCCAGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PELLVTSAATLK*SDGCSHSYPVF Trigger: GAAAACTGGATAGGAGTGAGAACAGCCGTCTGAGCACTTCAGGGTGGCAGCTGATGTCACCAGAAGCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR GCA 72 bp | CTGCCAGACAAGGACATTATGGGGTGCAGGGAGAGTTaGCATTCCCACCCTCTGCTTCTTCCCTCCAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LPDKDIMGCRES*HSHPLLLPSKQ Trigger: TTGTTTGGAGGGAAGAAGCAGAGGGTGGGAATGGCAACTCTCCCTGCACCCCATAATGTCCTTGTCTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR TCA 72 bp | CAGGAAGTCAGAGGATCAGAAGGCCAAGGTCGTCCTTaGCCAAGCAGTAAGTTCAAGGTCAGCCTAGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QEVRGSEGQGRP*PSSKFKVSLGY Trigger: GTAGCCTAGGCTGACCTTGAACTTACTGCTTGGTCAAGGACGACCTTGGCCTTCTGATCCTCTGACTTCCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR TCA 72 bp | TGCCATTCCCACCCTCTGCTTCTTCCCTCCAAACAATaGGGGAGGGCCTCTTCTTTGTTCTATGGCCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CHSHPLLLPSKQ*GRASSLFYGQS Trigger: TGACTGGCCATAGAACAAAGAAGAGGCCCTCCCTCATTGTTTGGAGGGAAGAAGCAGAGGGTGGGAATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR GCA 72 bp | GGCTCTCCTATGAGAATGCTGCCGAAAACCACAACTTaGTTCCTGTTTCTGAGGGCACGAAGGAGATGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GSPMRMLPKTTT*FLFLRARRRCL Trigger: GAGGCATCTCCTTCGTGCCCTCAGAAACAGGAAGCAAGTTGTGGTTTTCGGCAGCATTCTCATAGGAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR CCA 72 bp | GGGGGAAAAAGAGTTGAACTCAATGGGCAGTGGAGCTaGGGCCTTGCTGCTCAGATGGATAGAAGAGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GGKRVELNGQWS*GLAAQMDRRGD Trigger: ATCTCCTCTTCTATCCATCTGAGCAGCAAGGCCCCAGCTCCACTGCCCATTGAGTTCAACTCTTTTTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTGTTAAACCCTGGCTGCCTGTCAGGGGCCTTCATTGCACTTTCAGGTGACGAGATGCCTCCAGGTTaGTTTCTAAGTATGAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: GLLNPGCLSGAFIALSGDEMPPG*FLSMRT Trigger: TGTCCTCATACTTAGAAACAAACCTGGAGGCATCTC...GTCACCTGAAAGTGCAATGAAGGCCCCTGACAGGCAGCCAGGGTTTAACAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCAAACAATGAGGGAGGGCCTCTTCTTTGTTCTATGGCCAGTCAGATGTCTCATTTCCTGGGAACCTaGGTCCCTTTCTTCGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: PPNNEGGPLLCSMASQMSHFLGT*VPFFAL Trigger: CAGTGCGAAGAAAGGGACCAAGGTTCCCAGGAAATG...AGACATCTGACTGGCCATAGAACAAAGAAGAGGCCCTCCCTCATTGTTTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCAAACAATGAGGGAGGGCCTCTTCTTTGTTCTATGGCCAGTCAGATGTCTTCTGCCTCCGCCATCTaGGTCCTTATCTTCCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: PPNNEGGPLLCSMASQMSSASAI*VLIFHS Trigger: AGAGTGGAAGATAAGGACCAAGATGGCGGAGGCAGA...AGACATCTGACTGGCCATAGAACAAAGAAGAGGCCCTCCCTCATTGTTTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR TCA 72 bp | AGATGCATTGCATCGAGGAGCTTCTGTGGTCACTGGTaGCCACGCATGAACGGAGCTGTGTATGTAACATCC | + |
|
Preference number: 3 (lower is better) Translates to: RCIASRSFCGHW*PRMNGAVYVTS Trigger: GGATGTTACATACACAGCTCCGTTCATGCGTGGTCACCAGTGACCACAGAAGCTCCTCGATGCAATGCATCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR TCA 72 bp | GAATGCTGCCGAAAACCACAACTTGCTTCCTGTTTCTaGGGGCACGAAGGAGATGCCTCCAGGTTTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ECCRKPQLASCF*GHEGDASRFVS Trigger: AGAAACAAACCTGGAGGCATCTCCTTCGTGCCCTCAGAAACAGGAAGCAAGTTGTGGTTTTCGGCAGCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR CCA 72 bp | GTGACAAGAGGTGACACCGGAATCGTCACATTTCCCTaGCGTCTTCAAACACGTGAAAACAAACCACAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VTRGDTGIVTFP*RLQTRENKPQE Trigger: CTCCTGTGGTTTGTTTTCACGTGTTTGAAGACGCCAGGGAAATGTGACGATTCCGGTGTCACCTCTTGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGAGGGGGAGGGAAATGCTGAAATCTGTGGCAGTTAGTGAAGGACTGCCTAGGAGATACACTGGCTaGGTTCTTTGCATGCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: RKRGREMLKSVAVSEGLPRRYTG*VLCMHP Trigger: TGGATGCATGCAAAGAACCAAGCCAGTGTATCTCCT...AGGCAGTCCTTCACTAACTGCCACAGATTTCAGCATTTCCCTCCCCCTCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR TCA 72 bp | GAGATCCTGTCCACAGAAAGAGGGGGAGGGAAATGCTaGAATCTGTGGCAGTTAGTGAAGGACTGCCTTATA | + |
|
Preference number: 3 (lower is better) Translates to: EILSTERGGGKC*NLWQLVKDCLI Trigger: TATAAGGCAGTCCTTCACTAACTGCCACAGATTTCAGCATTTCCCTCCCCCTCTTTCTGTGGACAGGATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR CCA 72 bp | CTCCAAACAATGAGGGAGGGCCTCTTCTTTGTTCTATaGCCAGTCAGATGTCTCTTCCTGTCCATCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LQTMREGLFFVL*PVRCLFLSIFL Trigger: GAGAAAGATGGACAGGAAGAGACATCTGACTGGCCATAGAACAAAGAAGAGGCCCTCCCTCATTGTTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR TCA 72 bp | GTTGGTACCTACAGTTGCCTGGCATGGATGAAGCCCTaGATTCTATACTTAGTCCTGTGGATACGGTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VGTYSCLAWMKP*ILYLVLWIRCD Trigger: ATCACACCGTATCCACAGGACTAAGTATAGAATTCAGGGCTTCATCCATGCCAGGCAACTGTAGGTACCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR TCA 72 bp | AATATGTTCAGGGCTTCCAAGGGCAGTTCAGCCTTCTaGATGCGTGGTTATGATATTGCCCATGATGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: NMFRASKGSSAF*MRGYDIAHDEG Trigger: CCCTTCATCATGGGCAATATCATAACCACGCATTCAGAAGGCTGAACTGCCCTTGGAAGCCCTGAACATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR TCA 72 bp | CATAGGACTCAAGGCTCTAACATAGGACTCAAGGCATaGCCTGTTTGTTGGCTGCCAGACAAGGACATTATG | + |
|
Preference number: 3 (lower is better) Translates to: HRTQGSNIGLKA*PVCWLPDKDIM Trigger: CATAATGTCCTTGTCTGGCAGCCAACAAACAGGTCATGCCTTGAGTCCTATGTTAGAGCCTTGAGTCCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR-3UTR CAA 90 bp | TTACTGGGGCAGATGCTGATCACAACAGTAAAGAACCGTCGCAAACTTTACCCTCAGGGTATGAATCCATaGAGTGACAGGAAAATACAT | + |
|
Preference number: 3 (lower is better) Translates to: LLGQMLITTVKNRRKLYPQGMNP*SDRKIH Trigger: ATGTATTTTCCTGTCACTCAATGGATTCATACCCTG...AGGGTAAAGTTTGCGACGGTTCTTTACTGTTGTGATCAGCATCTGCCCCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR-3UTR CAA 90 bp | AATAAAGTTTGTAGAGAACTTTGGTTGTATAACACAAACGACCGAGACATCAGAAGTGGAGCTGGGGCCTaGCTGCTCAGATGGATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NKVCRELWLYNTNDRDIRSGAGA*LLRWIE Trigger: TTCTATCCATCTGAGCAGCAAGGCCCCAGCTCCACT...TCTGATGTCTCGGTCGTTTGTGTTATACAACCAAAGTTCTCTACAAACTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR TCA 72 bp | TTCTTATTTTCAGCAGTAAAATGTAGTGACAAGAGGTaGCACCGGAATCGTCACATTTCCCTGGCGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FLFSAVKCSDKR*HRNRHISLASS Trigger: TGAAGACGCCAGGGAAATGTGACGATTCCGGTGTCACCTCTTGTCACTACATTTTACTGCTGAAAATAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR-3UTR CAA 90 bp | AATAAAGTTTGTAGAGAACTTTGGTTGTATAACACAAACGACCGAGACATCAGAGCCGAAAACCACAACTaGCTTCCTGTTTCTGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NKVCRELWLYNTNDRDIRAENHN*LPVSEG Trigger: GCCCTCAGAAACAGGAAGCAAGTTGTGGTTTTCGGC...TCTGATGTCTCGGTCGTTTGTGTTATACAACCAAAGTTCTCTACAAACTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR-3UTR CAA 90 bp | AATAAAGTTTGTAGAGAACTTTGGTTGTATAACACAAACGACCGAGACATCAGATTTGAAACAGATGCATaGCATCGAGGAGCTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NKVCRELWLYNTNDRDIRFETDA*HRGASV Trigger: CACAGAAGCTCCTCGATGCAATGCATCTGTTTCAAA...TCTGATGTCTCGGTCGTTTGTGTTATACAACCAAAGTTCTCTACAAACTTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR TCA 72 bp | AAAGGATACCTAGTAACTTTTACCTCTTGGTTACTTTaGAAATTTGACATGACTATTCGAGAGAGGCCAATT | + |
|
Preference number: 3 (lower is better) Translates to: KGYLVTFTSWLL*KFDMTIRERPI Trigger: AATTGGCCTCTCTCGAATAGTCATGTCAAATTTTCAAAGTAACCAAGAGGTAAAAGTTACTAGGTATCCTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCCGCCATCTTGGTCCTTATCTTCCACTCTGGGCAAACATTTCCTGGGCGGTGGCCGAGGGAGTaGTCTTCAGCGGGCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SASAILVLIFHSGQTFPGRWPRE*SSAGAS Trigger: CGAAGCGCCCGCTGAAGACCACTCCCTCGGCCACCG...CCCAGGAAATGTTTGCCCAGAGTGGAAGATAAGGACCAAGATGGCGGAGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR GCA 90 bp | GAACTCAATGGGCAGTGGAGCTGGGGCCTTGCTGCTCAGATGGATAGAAGAGGACGCACCCCCGATTTTTaGCCCTCTGGCCTCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: ELNGQWSWGLAAQMDRRGRTPDF*PSGLCD Trigger: GTCGCAGAGGCCAGAGGGGCAAAAATCGGGGGTGCG...TCCTCTTCTATCCATCTGAGCAGCAAGGCCCCAGCTCCACTGCCCATTGAGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGGGGGAGGGAAATGCTGAAATCTGTGGCAGTTAGTGAAGGACTGCCTCCCTCTGGAATTCTCTaGGCTGGCAGCTGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKRGREMLKSVAVSEGLPPSGIL*AGSCSL Trigger: CAGGCTGCAGCTGCCAGCCCAGAGAATTCCAGAGGG...AGGCAGTCCTTCACTAACTGCCACAGATTTCAGCATTTCCCTCCCCCTCTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGGTGACATCAGCTGCCACCCTGAAGTGCTCAGACGGCTGTTCTCACTCGGCCTGCAACATGCCTaGCCTACTTTGTCACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASGDISCHPEVLRRLFSLGLQHA*PTLSLV Trigger: AACAAGTGACAAAGTAGGCCAGGCATGTTGCAGGCC...GAGTGAGAACAGCCGTCTGAGCACTTCAGGGTGGCAGCTGATGTCACCAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR TCA 90 bp | GGGCTGTTAAACCCTGGCTGCCTGTCAGGGGCCTTCATTGCACTTTCAGGTGACCCAAACCCAAGTCAGTaGCATTTAAGTGTATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLNPGCLSGAFIALSGDPNPSQ*HLSVWQ Trigger: CTGCCATACACTTAAATGTCACTGACTTGGGTTTGG...GTCACCTGAAAGTGCAATGAAGGCCCCTGACAGGCAGCCAGGGTTTAACAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR GCA 90 bp | CCACGCATGAACGGAGCTGTGTATGTAACATCCGTCTTTGTAAACCAACAGGCCGACCGGCCTGCAACATaGCTGGCCTACTTTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: PRMNGAVYVTSVFVNQQADRPAT*LAYFVT Trigger: AGTGACAAAGTAGGCCAGGCATGTTGCAGGCCGGTC...GGCCTGTTGGTTTACAAAGACGGATGTTACATACACAGCTCCGTTCATGCGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGGGGGAGGGAAATGCTGAAATCTGTGGCAGTTAGTGAAGGACTGCCTTGCGACCTTTCCCTCTaGAATTCTCTGGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKRGREMLKSVAVSEGLPCDLSL*NSLGWQ Trigger: CTGCCAGCCCAGAGAATTCCAGAGGGAAAGGTCGCA...AGGCAGTCCTTCACTAACTGCCACAGATTTCAGCATTTCCCTCCCCCTCTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR CCA 90 bp | TTACTGGGGCAGATGCTGATCACAACAGTAAAGAACCGTCGCAAACTTTACCCTAAGGCAGACGCGGTGTaGAGCAACACCAGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLGQMLITTVKNRRKLYPKADAV*SNTRQT Trigger: TGTCTGCCTGGTGTTGCTCCACACCGCGTCTGCCTT...AGGGTAAAGTTTGCGACGGTTCTTTACTGTTGTGATCAGCATCTGCCCCAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR CAA 72 bp | TGGCTCTCCTATGAGAATGCTGCCGAAAACCACAACTaGCTTCCTGTTTCTGAGGGCACGAAGGAGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLSYENAAENHN*LPVSEGTKEMP Trigger: AGGCATCTCCTTCGTGCCCTCAGAAACAGGAAGCAAGTTGTGGTTTTCGGCAGCATTCTCATAGGAGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR CAA 72 bp | AAACACGTGAAAACAAACCACAGGAGATACACTGGCTaGGTTCTTTGCATGCATCCACGACTCGGACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHVKTNHRRYTG*VLCMHPRLGPP Trigger: TGGCGGTCCGAGTCGTGGATGCATGCAAAGAACCAAGCCAGTGTATCTCCTGTGGTTTGTTTTCACGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR CAA 72 bp | AAAGAGTTGAACTCAATGGGCAGTGGAGCTGGGGCCTaGCTGCTCAGATGGATAGAAGAGGAGATGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KELNSMGSGAGA*LLRWIEEEMQT Trigger: TGTTTGCATCTCCTCTTCTATCCATCTGAGCAGCAAGGCCCCAGCTCCACTGCCCATTGAGTTCAACTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCCAATTAATTGGTCATTTATTATTTTAGATCTATCTGTCCTACTCTGGCTCTGGGCTGGCAGCTaGAGCCTGCCGATTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERPINWSFIILDLSVLLWLWAGS*SLPIPL Trigger: GAGAGGAATCGGCAGGCTGCAGCTGCCAGCCCAGAG...CCAGAGTAGGACAGATAGATCTAAAATAATAAATGACCAATTAATTGGCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR CCA 90 bp | TTACTGGGGCAGATGCTGATCACAACAGTAAAGAACCGTCGCAAACTTTACCCTAGATCAGTTCCTCCTTaGTTTCATAGCCCAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGQMLITTVKNRRKLYPRSVPP*FHSPNP Trigger: TGGGTTTGGGCTATGAAACCAAGGAGGAACTGATCT...AGGGTAAAGTTTGCGACGGTTCTTTACTGTTGTGATCAGCATCTGCCCCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| 3UTR CAA 72 bp | AGGGCAGTTCAGCCTTCTGAATGCGTGGTTATGATATaGCCCATGATGAAGGGGGAAAAAGAGTTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RAVQPSECVVMI*PMMKGEKELNS Trigger: TGAGTTCAACTCTTTTTCCCCCTTCATCATGGGCAATATCATAACCACGCATTCAGAAGGCTGAACTGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR GCA 90 bp | AATAAAGTTTGTAGAGAACTTTGGTTGTATAACACAAACGACCGAGACATCAGACTGGCAGCTGCAGCCTaGCGATTCCTCTCTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NKVCRELWLYNTNDRDIRLAAAA*RFLSLR Trigger: TCGAAGAGAGAGGAATCGGCAGGCTGCAGCTGCCAG...TCTGATGTCTCGGTCGTTTGTGTTATACAACCAAAGTTCTCTACAAACTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR GCA 90 bp | AATAAAGTTTGTAGAGAACTTTGGTTGTATAACACAAACGACCGAGACATCAGATGCCCCTCTGGCCTCTaGGACCTTTCCCTCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NKVCRELWLYNTNDRDIRCPSGL*DLSLWN Trigger: ATTCCAGAGGGAAAGGTCGCAGAGGCCAGAGGGGCA...TCTGATGTCTCGGTCGTTTGTGTTATACAACCAAAGTTCTCTACAAACTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR CCA 90 bp | AATAAAGTTTGTAGAGAACTTTGGTTGTATAACACAAACGACCGAGACATCAGAGCATATTGGAGTCACTaGTCAGCGCGAAGGGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: NKVCRELWLYNTNDRDIRAYWSH*SARRAR Trigger: GCGTGCCCTTCGCGCTGACCAGTGACTCCAATATGC...TCTGATGTCTCGGTCGTTTGTGTTATACAACCAAAGTTCTCTACAAACTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGGCCAATTAATTGGTCATTTATTATTTTAGATCTATCTGTCCTACTCTGGAATCTTCAGGCATATTaGAGTCACTGGTCAGCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ERPINWSFIILDLSVLLWNLQAY*SHWSAR Trigger: TCGCGCTGACCAGTGACTCCAATATGCCTGAAGATT...CCAGAGTAGGACAGATAGATCTAAAATAATAAATGACCAATTAATTGGCCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS CCA 90 bp | GAGTCACTGGTCAGCGCGAAGGGCACGCGGCGGTGGCCGAGGGAGTaGTCTTCAGCGGGCGCTTCGAGAAGCCTCTTACCGGCGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESLVSAKGTRRWPRE*SSAGASRSLLPAGS Trigger: GCTGCCCGCCGGTAAGAGGCTTCTCGAAGCGCCCGCTGAAGACCACTCCCTCGGCCACCGCCGCGTGCCCTTCGCGCTGACCAGTGACTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS CCA 90 bp | TCAGGCATATTGGAGTCACTGGTCAGCGCGAAGGGCACGCGGCGGTaGCCGAGGGAGTGGTCTTCAGCGGGCGCTTCGAGAAGCCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SGILESLVSAKGTRR*PREWSSAGASRSLL Trigger: TAAGAGGCTTCTCGAAGCGCCCGCTGAAGACCACTCCCTCGGCCACCGCCGCGTGCCCTTCGCGCTGACCAGTGACTCCAATATGCCTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS CCA 90 bp | ATTTTTGCCCCTCTGGCCTCTGCGACCTTTCCCTCTGGAATTCTCTaGGCTGGCAGCTGCAGCCTGCCGATTCCTCTCTCTTCGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IFAPLASATFPSGIL*AGSCSLPIPLSSRK Trigger: CTTCCTCGAAGAGAGAGGAATCGGCAGGCTGCAGCTGCCAGCCCAGAGAATTCCAGAGGGAAAGGTCGCAGAGGCCAGAGGGGCAAAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR CAA 90 bp | GCTGGGCCTTCTTCCACCAGGCTCCCACGGTGGCTACCTTCCTCCTTCTTTTTCGGCCTACTTTGTCACTaGTTAGCCTTCTACTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGPSSTRLPRWLPSSFFFGLLCH*LAFYSE Trigger: CTCGGAGTAGAAGGCTAACAAGTGACAAAGTAGGCC...GAAAAAGAAGGAGGAAGGTAGCCACCGTGGGAGCCTGGTGGAAGAAGGCCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS GCA 90 bp | GGTTGTCATCTAAAAACGACAGGTCGTCGTCGAAGGCGACCGGCCTaGAACATGCCTGGCCTACTTTGTCACTTGTTAGCCTTCTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCHLKTTGRRRRRPA*NMPGLLCHLLAFYS Trigger: GGAGTAGAAGGCTAACAAGTGACAAAGTAGGCCAGGCATGTTGCAGGCCGGTCGCCTTCGACGACGACCTGTCGTTTTTAGATGACAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS CCA 90 bp | AAAAACGACAGGTCGTCGTCGAAGGCGACCGGCCTGCAACATGCCTaGCCTACTTTGTCACTTGTTAGCCTTCTACTCCGAGACAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KNDRSSSKATGLQHA*PTLSLVSLLLRDRF Trigger: AAACCTGTCTCGGAGTAGAAGGCTAACAAGTGACAAAGTAGGCCAGGCATGTTGCAGGCCGGTCGCCTTCGACGACGACCTGTCGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
||
| CDS-3UTR CAA 90 bp | TCTGCCTCCGCCATCTTGGTCCTTATCTTCCACTCTGGGCAAACATTTCCTGGGTCCGTAGACCCCCAGTaGGACATTAACTCCAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: SASAILVLIFHSGQTFPGSVDPQ*DINSKW Trigger: CCACTTGGAGTTAATGTCCAACTGGGGGTCTACGGA...CCCAGGAAATGTTTGCCCAGAGTGGAAGATAAGGACCAAGATGGCGGAGGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS-3UTR CAA 90 bp | AGACAAGGACATTATGGGGTGCAGGGAGAGTTGCCATTCCCACCCTCTGCTTCTCATGCCTGGCCTACTTaGTCACTTGTTAGCCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: RQGHYGVQGELPFPPSASHAWPT*SLVSLL Trigger: TAGAAGGCTAACAAGTGACAAAGTAGGCCAGGCATG...AGAAGCAGAGGGTGGGAATGGCAACTCTCCCTGCACCCCATAATGTCCTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS-3UTR CAA 90 bp | GCTGGGCCTTCTTCCACCAGGCTCCCACGGTGGCTACCTTCCTCCTTCTTTTTCTCTTTTAATGGTGGCTaGAATAAAATCCATGACGTC | + |
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Preference number: 5 (lower is better) Translates to: AGPSSTRLPRWLPSSFFFSFNGG*NKIHDV Trigger: GACGTCATGGATTTTATTCAAGCCACCATTAAAAGA...GAAAAAGAAGGAGGAAGGTAGCCACCGTGGGAGCCTGGTGGAAGAAGGCCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS GCA 90 bp | TTAGTATTTTGTCATACATTGTCTCGGCCGATTCACAGGAACCGCTaGAATATCGAAAGATCAGTTCCTCCTTGGTTTCATAGCCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LVFCHTLSRPIHRNR*NIERSVPPWFHSPN Trigger: GTTTGGGCTATGAAACCAAGGAGGAACTGATCTTTCGATATTGCAGCGGTTCCTGTGAATCGGCCGAGACAATGTATGACAAAATACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS CCA 72 bp | GTCAGCGCGAAGGGCACGCGGCGGTGGCCGAGGGAGTaGTCTTCAGCGGGCGCTTCGAGAAGCCTCTTACCG | + |
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Preference number: 6 (lower is better) Translates to: VSAKGTRRWPRE*SSAGASRSLLP Trigger: CGGTAAGAGGCTTCTCGAAGCGCCCGCTGAAGACCACTCCCTCGGCCACCGCCGCGTGCCCTTCGCGCTGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS CCA 72 bp | TTGGAGTCACTGGTCAGCGCGAAGGGCACGCGGCGGTaGCCGAGGGAGTGGTCTTCAGCGGGCGCTTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: LESLVSAKGTRR*PREWSSAGASR Trigger: TCTCGAAGCGCCCGCTGAAGACCACTCCCTCGGCCACCGCCGCGTGCCCTTCGCGCTGACCAGTGACTCCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS CCA 72 bp | CTCTTACCGGCGGGCAGCGGGAAGGCAGACGCGGTGTaGAGCAACACCAGGCAGACAGCCACGACATCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLPAGSGKADAV*SNTRQTATTSH Trigger: ATGGGATGTCGTGGCTGTCTGCCTGGTGTTGCTCCACACCGCGTCTGCCTTCCCGCTGCCCGCCGGTAAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS CCA 72 bp | CCTCTGGCCTCTGCGACCTTTCCCTCTGGAATTCTCTaGGCTGGCAGCTGCAGCCTGCCGATTCCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PLASATFPSGIL*AGSCSLPIPLS Trigger: AGAGAGAGGAATCGGCAGGCTGCAGCTGCCAGCCCAGAGAATTCCAGAGGGAAAGGTCGCAGAGGCCAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS CCA 72 bp | AGGTCGTCGTCGAAGGCGACCGGCCTGCAACATGCCTaGCCTACTTTGTCACTTGTTAGCCTTCTACTCCGA | + |
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Preference number: 6 (lower is better) Translates to: RSSSKATGLQHA*PTLSLVSLLLR Trigger: TCGGAGTAGAAGGCTAACAAGTGACAAAGTAGGCCAGGCATGTTGCAGGCCGGTCGCCTTCGACGACGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS GCA 72 bp | CTAAAAACGACAGGTCGTCGTCGAAGGCGACCGGCCTaGAACATGCCTGGCCTACTTTGTCACTTGTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: LKTTGRRRRRPA*NMPGLLCHLLA Trigger: GGCTAACAAGTGACAAAGTAGGCCAGGCATGTTGCAGGCCGGTCGCCTTCGACGACGACCTGTCGTTTTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS CAA 72 bp | TCGAAGGCGACCGGCCTGCAACATGCCTGGCCTACTTaGTCACTTGTTAGCCTTCTACTCCGAGACAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SKATGLQHAWPT*SLVSLLLRDRF Trigger: AAACCTGTCTCGGAGTAGAAGGCTAACAAGTGACAAAGTAGGCCAGGCATGTTGCAGGCCGGTCGCCTTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS TCA 72 bp | GTTCCTCCTTGGTTTCATAGCCCAAACCCAAGTCAGTaGCATTTAAGTGTATGGCAGTTAAAACGCACCCCC | + |
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Preference number: 6 (lower is better) Translates to: VPPWFHSPNPSQ*HLSVWQLKRTP Trigger: GGGGGTGCGTTTTAACTGCCATACACTTAAATGTCACTGACTTGGGTTTGGGCTATGAAACCAAGGAGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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| CDS GCA 72 bp | TGTCATACATTGTCTCGGCCGATTCACAGGAACCGCTaGAATATCGAAAGATCAGTTCCTCCTTGGTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: CHTLSRPIHRNR*NIERSVPPWFH Trigger: ATGAAACCAAGGAGGAACTGATCTTTCGATATTGCAGCGGTTCCTGTGAATCGGCCGAGACAATGTATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022744.5 |
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