Pregenerated sensors for GDI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021218Ensembl transcript IDs: ENSMUST00000059515.8, ENSMUST00000221581.2, ENSMUST00000222365.2, ENSMUST00000223396.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCATGTTTTACTATATCACATCTTCTAAGTCTTAGGTGGACTGTCTaGCTTTCTGAAGCTGGTACAGTTGTAGCTTATATCCCTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: ACFTISHLLSLRWTV*LSEAGTVVAYIPSL Trigger: GAGGGAAGGGATATAAGCTACAACTGTACCAGCTTCAGAAAGCCAGACAGTCCACCTAAGACTTAGAAGATGTGATATAGTAAAACATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR CCA 90 bp | ACTGTTGTAGGTCTGAAGTTTGGCTACCCTCATAAACAAAACATGTaGCTCTCTTCTATTGGCCCTGCTGTGATACTTGACATAACAAAA | + |
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Preference number: 1 (lower is better) Translates to: TVVGLKFGYPHKQNM*LSSIGPAVILDITK Trigger: TTTTGTTATGTCAAGTATCACAGCAGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATGAGGGTAGCCAAACTTCAGACCTACAACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| 3UTR CCA 90 bp | CCTACATATGCATGTTTTACTATATCACATCTTCTAAGTCTTAGGTaGACTGTCTGGCTTTCTGAAGCTGGTACAGTTGTAGCTTATATC | + |
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Preference number: 1 (lower is better) Translates to: PTYACFTISHLLSLR*TVWLSEAGTVVAYI Trigger: GATATAAGCTACAACTGTACCAGCTTCAGAAAGCCAGACAGTCCACCTAAGACTTAGAAGATGTGATATAGTAAAACATGCATATGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTTGGCTACCCTCATAAACAAAACATGTGGCTCTCTTCTATTGGCCCTGCTGGTCCCAATTTCAGGGTaGCACAAATTGTATGGATCC | + |
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Preference number: 2 (lower is better) Translates to: SLATLINKTCGSLLLALLVPISG*HKLYGS Trigger: GGATCCATACAATTTGTGCCACCCTGAAATTGGGAC...CAGCAGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATGAGGGTAGCCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| 3UTR CAA 90 bp | CCAAAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATaGTATGGATCCAGCTCTTGGATCACACAATCGCAAAGGCTACAC | + |
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Preference number: 2 (lower is better) Translates to: PKDTQFRVPISGWHK*YGSSSWITQSQRLH Trigger: GTGTAGCCTTTGCGATTGTGTGATCCAAGAGCTGGATCCATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGGCTACCCTCATAAACAAAACATGTGGCTCTCTTCTATTGGCCCTGCTGCATGATATTAGAAAGTaGAGGAGCATTCACTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: SLATLINKTCGSLLLALLHDIRK*RSIHWY Trigger: ATACCAGTGAATGCTCCTTCACTTTCTAATATCATG...CAGCAGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATGAGGGTAGCCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGGCTACCCTCATAAACAAAACATGTGGCTCTCTTCTATTGGCCCTGCTGTCGCAAAGGCTACACTaGTTAAATGATACAAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SLATLINKTCGSLLLALLSQRLH*LNDTSS Trigger: AGAACTTGTATCATTTAATCAGTGTAGCCTTTGCGA...CAGCAGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATGAGGGTAGCCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATTGTATGGATCCTCGCAAAGGCTACACTaGTTAAATGATACAAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KDTQFRVPISGWHKLYGSSQRLH*LNDTSS Trigger: AGAACTTGTATCATTTAATCAGTGTAGCCTTTGCGA...GGATCCATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAACTGCTCTTTGATTAATCAGCCAGCTTTAACTTTGTCCAGTGATGTCACTTGTACACTCAAACCATaGAACAAACACAGGTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: KNCSLINQPALTLSSDVTCTLKP*NKHRLL Trigger: AAGCAACCTGTGTTTGTTTCATGGTTTGAGTGTACA...AGTGACATCACTGGACAAAGTTAAAGCTGGCTGATTAATCAAAGAGCAGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR-3UTR CCA 90 bp | TATGGTCAGAGGATTAAGAACTGCATGTTTGAGAGGTTTTACCACATTGTAGAACATAAACAAAACATGTaGCTCTCTTCTATTGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: YGQRIKNCMFERFYHIVEHKQNM*LSSIGP Trigger: AGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATG...TTCTACAATGTGGTAAAACCTCTCAAACATGCAGTTCTTAATCCTCTGACCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAACTGCTCTTTGATTAATCAGCCAGCTTTAACTTTGTCCAGTGATGTCACTACTCAATACCAAGAGTaGTTTCCAGAGTTTGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: KNCSLINQPALTLSSDVTTQYQE*FPEFGF Trigger: AAAGCCAAACTCTGGAAACCACTCTTGGTATTGAGT...AGTGACATCACTGGACAAAGTTAAAGCTGGCTGATTAATCAAAGAGCAGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTCCAGGAAAGCAAACACCCTCTTCTGGACTCTTAGGGTACCTACATTCACGATACTGCATTGCAGCTaGGTCCGGGGGAGGAGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: RSRKANTLFWTLRVPTFTILHCS*VRGRSR Trigger: ACGGCTCCTCCCCCGGACCAAGCTGCAATGCAGTAT...CGTGAATGTAGGTACCCTAAGAGTCCAGAAGAGGGTGTTTGCTTTCCTGGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR-3UTR CAA 90 bp | AGGTCCAGGAAAGCAAACACCCTCTTCTGGACTCTTAGGGTACCTACATTCACGTCATCTGGAGCCATTTaGGAACAGGCATCGTTGACA | + |
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Preference number: 3 (lower is better) Translates to: RSRKANTLFWTLRVPTFTSSGAI*EQASLT Trigger: TGTCAACGATGCCTGTTCCAAAATGGCTCCAGATGA...CGTGAATGTAGGTACCCTAAGAGTCCAGAAGAGGGTGTTTGCTTTCCTGGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR-3UTR CAA 90 bp | CTTACCATTTTTGTGTTCCTACAGGTAATTTTGGGAGTTGGCTATACATGGAGTCAGATTAATACTGCATaGCAGCTTGGTCCGGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LTIFVFLQVILGVGYTWSQINTA*QLGPGE Trigger: CTCCCCCGGACCAAGCTGCAATGCAGTATTAATCTG...ACTCCATGTATAGCCAACTCCCAAAATTACCTGTAGGAACACAAAAATGGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR CCA 72 bp | TCTAAAACTAGGTCCAGGAAAGCAAACACCCTCTTCTaGACTCTTAGGGTACCTACATTCACGTGTATACCT | + |
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Preference number: 3 (lower is better) Translates to: SKTRSRKANTLF*TLRVPTFTCIP Trigger: AGGTATACACGTGAATGTAGGTACCCTAAGAGTCCAGAAGAGGGTGTTTGCTTTCCTGGACCTAGTTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR CCA 72 bp | GCATGTTTTACTATATCACATCTTCTAAGTCTTAGGTaGACTGTCTGGCTTTCTGAAGCTGGTACAGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ACFTISHLLSLR*TVWLSEAGTVV Trigger: TACAACTGTACCAGCTTCAGAAAGCCAGACAGTCCACCTAAGACTTAGAAGATGTGATATAGTAAAACATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR TCA 72 bp | CATGAAACAAACACAGGTTGCTTCTTGTCTGGTATTTaGAGATCACTGACTACTAAACTGAAGCCAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: HETNTGCFLSGI*RSLTTKLKPGN Trigger: ATTTCCTGGCTTCAGTTTAGTAGTCAGTGATCTTCAAATACCAGACAAGAAGCAACCTGTGTTTGTTTCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| 3UTR TCA 72 bp | TCCAGCTCTTGGATCACACAATCGCAAAGGCTACACTaGTTAAATGATACAAGTTCTCTATCGATATCAATA | + |
|
Preference number: 3 (lower is better) Translates to: SSSWITQSQRLH*LNDTSSLSISI Trigger: TATTGATATCGATAGAGAACTTGTATCATTTAATCAGTGTAGCCTTTGCGATTGTGTGATCCAAGAGCTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| 3UTR CCA 72 bp | TACCATTTTTGTGTTCCTACAGGTAATTTTGGGAGTTaGCTATACATGGAGTACATCAACAAGAACTTCATA | + |
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Preference number: 3 (lower is better) Translates to: YHFCVPTGNFGS*LYMEYINKNFI Trigger: TATGAAGTTCTTGTTGATGTACTCCATGTATAGCCAACTCCCAAAATTACCTGTAGGAACACAAAAATGGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| CDS-3UTR TCA 90 bp | AGTTTGGCTACCCTCATAAACAAAACATGTGGCTCTCTTCTATTGGCCCTGCTGTCTTCCTCTTCCCATTaGTGCTGGCGGTTGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SLATLINKTCGSLLLALLSSSSH*CWRLSW Trigger: CCAGGACAACCGCCAGCATCAATGGGAAGAGGAAGA...CAGCAGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATGAGGGTAGCCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR GCA 90 bp | CCTACAGGTAATTTTGGGAGTTGGCTATACATGGAGTACATCAACAAGAACTTCATTCCGTCAGGCCGGTaGCCAGCACGATCACGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PTGNFGSWLYMEYINKNFIPSGR*PARSRR Trigger: ACGACGTGATCGTGCTGGGCACCGGCCTGACGGAAT...GAAGTTCTTGTTGATGTACTCCATGTATAGCCAACTCCCAAAATTACCTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| CDS-3UTR GCA 90 bp | AAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATTGTATGGATCCATAACGTCAGGCCGGTaGCCAGCACGATCACGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KDTQFRVPISGWHKLYGSITSGR*PARSRR Trigger: ACGACGTGATCGTGCTGGGCACCGGCCTGACGTTAT...GGATCCATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059515.8 |
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| CDS-3UTR TCA 90 bp | AGTTTGGCTACCCTCATAAACAAAACATGTGGCTCTCTTCTATTGGCCCTGCTGAGCATCTTCACCAACTaGCCATTGGCCATAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SLATLINKTCGSLLLALLSIFTN*PLAIRN Trigger: GTTCCTTATGGCCAATGGTCAGTTGGTGAAGATGCT...CAGCAGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATGAGGGTAGCCAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR CCA 90 bp | AGGTCCAGGAAAGCAAACACCCTCTTCTGGACTCTTAGGGTACCTACATTCACGCGGTTGTACTTACAATaGCAATATACTTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RSRKANTLFWTLRVPTFTRLYLQ*QYTCPV Trigger: CACAGGGCAAGTATATTGCCATTGTAAGTACAACCG...CGTGAATGTAGGTACCCTAAGAGTCCAGAAGAGGGTGTTTGCTTTCCTGGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| CDS-3UTR TCA 90 bp | AGTTTGGCTACCCTCATAAACAAAACATGTGGCTCTCTTCTATTGGCCCTGCTGAAACCAGGAACTTCCTaGAACGGCGTTTCTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SLATLINKTCGSLLLALLKPGTS*NGVSQT Trigger: TGTTTGAGAAACGCCGTTTCAGGAAGTTCCTGGTTT...CAGCAGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATGAGGGTAGCCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR TCA 90 bp | CTCAAAGTGCGTGGTAGCATCATAGGCACGGGAAATGAAGATCTGGAAGTAAGAATCATCACACTCACCTaGCTATCTGTTCCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: LKVRGSIIGTGNEDLEVRIITLT*LSVPKS Trigger: AGATTTGGGAACAGATAGTCAGGTGAGTGTGATGAT...TCTTACTTCCAGATCTTCATTTCCCGTGCCTATGATGCTACCACGCACTTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221581.2 |
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| CDS-3UTR CCA 90 bp | AAAGTGCGTGGTAGCATCATAGGCACGGGAAATGAAGATCTGGAAGTAAGAATTCTTTCTCTGGTTCCTTaGTCTCCACGGTTGTACTTA | + |
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Preference number: 4 (lower is better) Translates to: KVRGSIIGTGNEDLEVRILSLVP*SPRLYL Trigger: TAAGTACAACCGTGGAGACCAAGGAACCAGAGAAAG...AATTCTTACTTCCAGATCTTCATTTCCCGTGCCTATGATGCTACCACGCACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221581.2 |
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| CDS-3UTR TCA 90 bp | CGTGGTAGCATCATAGGCACGGGAAATGAAGATCTGGAAGTAAGAATTAGACTAGCAAACATAGATATCTaGCTTGCGGTTGACTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: RGSIIGTGNEDLEVRIRLANIDI*LAVDLV Trigger: AACCAAGTCAACCGCAAGTCAGATATCTATGTTTGC...TAGTCTAATTCTTACTTCCAGATCTTCATTTCCCGTGCCTATGATGCTACCACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221581.2 |
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| CDS-3UTR CCA 90 bp | AAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATTGTATGGATCCCTTTCTCTGGTTCCTTaGTCTCCACGGTTGTACTTA | + |
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Preference number: 4 (lower is better) Translates to: KDTQFRVPISGWHKLYGSLSLVP*SPRLYL Trigger: TAAGTACAACCGTGGAGACCAAGGAACCAGAGAAAG...GGATCCATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR TCA 90 bp | AAAAACTGCTCTTTGATTAATCAGCCAGCTTTAACTTTGTCCAGTGATGTCACTAGCATCTTCACCAACTaGCCATTGGCCATAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KNCSLINQPALTLSSDVTSIFTN*PLAIRN Trigger: GTTCCTTATGGCCAATGGTCAGTTGGTGAAGATGCT...AGTGACATCACTGGACAAAGTTAAAGCTGGCTGATTAATCAAAGAGCAGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| CDS-3UTR TCA 90 bp | AAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATTGTATGGATCCGCAAACATAGATATCTaGCTTGCGGTTGACTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: KDTQFRVPISGWHKLYGSANIDI*LAVDLV Trigger: AACCAAGTCAACCGCAAGTCAGATATCTATGTTTGC...GGATCCATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR TCA 90 bp | AAAAACTGCTCTTTGATTAATCAGCCAGCTTTAACTTTGTCCAGTGATGTCACTCTTCTTCCCATTCACTaGCATTATCCCCGACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: KNCSLINQPALTLSSDVTLLPIH*HYPRQD Trigger: ATCCTGTCGGGGATAATGTCAGTGAATGGGAAGAAG...AGTGACATCACTGGACAAAGTTAAAGCTGGCTGATTAATCAAAGAGCAGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| CDS-3UTR CCA 90 bp | AAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATTGTATGGATCCCGGTTGTACTTACAATaGCAATATACTTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KDTQFRVPISGWHKLYGSRLYLQ*QYTCPV Trigger: CACAGGGCAAGTATATTGCCATTGTAAGTACAACCG...GGATCCATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR TCA 90 bp | TATGGTCAGAGGATTAAGAACTGCATGTTTGAGAGGTTTTACCACATTGTAGAAAAACCAGGAACTTCCTaGAACGGCGTTTCTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: YGQRIKNCMFERFYHIVEKPGTS*NGVSQT Trigger: TGTTTGAGAAACGCCGTTTCAGGAAGTTCCTGGTTT...TTCTACAATGTGGTAAAACCTCTCAAACATGCAGTTCTTAATCCTCTGACCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| CDS-3UTR TCA 90 bp | AACCAAAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATTGTATGGCAAACATAGATATCTaGCTTGCGGTTGACTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: NQRILNLESQFQGGTNCMANIDI*LAVDLV Trigger: AACCAAGTCAACCGCAAGTCAGATATCTATGTTTGC...CATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTTTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR TCA 90 bp | GAAAGTGAAGGAGCATTCACTGGTATAGCACTCTTCAATCTCCATTTTGATCATCGGGAAATGAAGATCTaGCTATCTGTTCCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: ESEGAFTGIALFNLHFDHREMKI*LSVPKS Trigger: AGATTTGGGAACAGATAGTCAGATCTTCATTTCCCG...ATGATCAAAATGGAGATTGAAGAGTGCTATACCAGTGAATGCTCCTTCACTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR GCA 90 bp | GAAAGTGAAGGAGCATTCACTGGTATAGCACTCTTCAATCTCCATTTTGATCATGCTTTTACCGTATCTTaGCAAAGACTCGCTGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: ESEGAFTGIALFNLHFDHAFTVS*QRLAVK Trigger: CTTTACAGCGAGTCTTTGGCAAGATACGGTAAAAGC...ATGATCAAAATGGAGATTGAAGAGTGCTATACCAGTGAATGCTCCTTCACTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR GCA 90 bp | GAGAAAACGTTGAACGTCTTCAGAAACCAAAGGATACTCAATTTAGAGTCCCAAGCTTTTACCGTATCTTaGCAAAGACTCGCTGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: EKTLNVFRNQRILNLESQAFTVS*QRLAVK Trigger: CTTTACAGCGAGTCTTTGGCAAGATACGGTAAAAGC...TTGGGACTCTAAATTGAGTATCCTTTGGTTTCTGAAGACGTTCAACGTTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR GCA 90 bp | GGTAGCATCATAGGCACGGGAAATGAAGATCTGGAAGTAAGAATTAGACTACTTAATATACTTGCCCTGTaGTGCCACATTATGTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GSIIGTGNEDLEVRIRLLNILAL*CHIMCK Trigger: TTTGCACATAATGTGGCAGCACAGGGCAAGTATATT...AAGTAGTCTAATTCTTACTTCCAGATCTTCATTTCCCGTGCCTATGATGCTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221581.2 |
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| CDS-3UTR CCA 90 bp | GATCTGGAAGTAAGAATTAGACTACTTAGGGATGGACATTGCTCAGTAAAGACTCGGTTGTACTTACAATaGCAATATACTTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: DLEVRIRLLRDGHCSVKTRLYLQ*QYTCPV Trigger: CACAGGGCAAGTATATTGCCATTGTAAGTACAACCG...AGTCTTTACTGAGCAATGTCCATCCCTAAGTAGTCTAATTCTTACTTCCAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221581.2 |
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| CDS-3UTR TCA 90 bp | TATGGTCAGAGGATTAAGAACTGCATGTTTGAGAGGTTTTACCACATTGTAGAACGGGAAATGAAGATCTaGCTATCTGTTCCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: YGQRIKNCMFERFYHIVEREMKI*LSVPKS Trigger: AGATTTGGGAACAGATAGTCAGATCTTCATTTCCCG...TTCTACAATGTGGTAAAACCTCTCAAACATGCAGTTCTTAATCCTCTGACCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| CDS-3UTR GCA 90 bp | AACCAAAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATTGTATGAATATACTTGCCCTGTaGTGCCACATTATGTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: NQRILNLESQFQGGTNCMNILAL*CHIMCK Trigger: TTTGCACATAATGTGGCAGCACAGGGCAAGTATATT...CATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTTTGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| 3UTR CAA 72 bp | CATTTTCTTACCATTTTTGTGTTCCTACAGGTAATTTaGGGAGTTGGCTATACATGGAGTACATCAACAAGA | + |
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Preference number: 4 (lower is better) Translates to: HFLTIFVFLQVI*GVGYTWSTSTR Trigger: TCTTGTTGATGTACTCCATGTATAGCCAACTCCCAAAATTACCTGTAGGAACACAAAAATGGTAAGAAAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| CDS-3UTR CAA 90 bp | AGTTTGGCTACCCTCATAAACAAAACATGTGGCTCTCTTCTATTGGCCCTGCTGGCATCGTTGGTGTTCTaGATAGGGTGGCTAAGGATA | + |
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Preference number: 5 (lower is better) Translates to: SLATLINKTCGSLLLALLASLVF*IGWLRI Trigger: TATCCTTAGCCACCCTATCAAGAACACCAACGATGC...CAGCAGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATGAGGGTAGCCAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR CAA 90 bp | AGTTTGGCTACCCTCATAAACAAAACATGTGGCTCTCTTCTATTGGCCCTGCTGACAATGGCAATATACTaGCCCTGTGCTGCCACATTA | + |
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Preference number: 5 (lower is better) Translates to: SLATLINKTCGSLLLALLTMAIY*PCAATL Trigger: TAATGTGGCAGCACAGGGCAAGTATATTGCCATTGT...CAGCAGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATGAGGGTAGCCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR CAA 90 bp | CTCAAAGTGCGTGGTAGCATCATAGGCACGGGAAATGAAGATCTGGAAGTAAGAACAATGGCAATATACTaGCCCTGTGCTGCCACATTA | + |
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Preference number: 5 (lower is better) Translates to: LKVRGSIIGTGNEDLEVRTMAIY*PCAATL Trigger: TAATGTGGCAGCACAGGGCAAGTATATTGCCATTGT...TCTTACTTCCAGATCTTCATTTCCCGTGCCTATGATGCTACCACGCACTTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221581.2 |
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| CDS-3UTR CAA 90 bp | AGTTTGGCTACCCTCATAAACAAAACATGTGGCTCTCTTCTATTGGCCCTGCTGATATGGCACTTAACCTaGCAAATCCTTGCGGCAATT | + |
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Preference number: 5 (lower is better) Translates to: SLATLINKTCGSLLLALLIWHLT*QILAAI Trigger: AATTGCCGCAAGGATTTGCAAGGTTAAGTGCCATAT...CAGCAGGGCCAATAGAAGAGAGCCACATGTTTTGTTTATGAGGGTAGCCAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR CAA 90 bp | AAAGTGCGTGGTAGCATCATAGGCACGGGAAATGAAGATCTGGAAGTAAGAATTTCTTTCTCTGGTTCCTaGGTCTCCACGGTTGTACTT | + |
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Preference number: 5 (lower is better) Translates to: KVRGSIIGTGNEDLEVRISFSGS*VSTVVL Trigger: AAGTACAACCGTGGAGACCAAGGAACCAGAGAAAGA...AATTCTTACTTCCAGATCTTCATTTCCCGTGCCTATGATGCTACCACGCACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221581.2 |
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| CDS-3UTR CAA 90 bp | AAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATTGTATGGATCCTCTTTCTCTGGTTCCTaGGTCTCCACGGTTGTACTT | + |
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Preference number: 5 (lower is better) Translates to: KDTQFRVPISGWHKLYGSSFSGS*VSTVVL Trigger: AAGTACAACCGTGGAGACCAAGGAACCAGAGAAAGA...GGATCCATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR CAA 90 bp | AACCAAAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATTGTATGTCTTTCTCTGGTTCCTaGGTCTCCACGGTTGTACTT | + |
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Preference number: 5 (lower is better) Translates to: NQRILNLESQFQGGTNCMSFSGS*VSTVVL Trigger: AAGTACAACCGTGGAGACCAAGGAACCAGAGAAAGA...CATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTTTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR CAA 90 bp | GAAAGTGAAGGAGCATTCACTGGTATAGCACTCTTCAATCTCCATTTTGATCATGGCTTTTACCGTATCTaGCCAAAGACTCGCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: ESEGAFTGIALFNLHFDHGFYRI*PKTRCK Trigger: TTTACAGCGAGTCTTTGGCAAGATACGGTAAAAGCC...ATGATCAAAATGGAGATTGAAGAGTGCTATACCAGTGAATGCTCCTTCACTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR CAA 90 bp | CTTACCATTTTTGTGTTCCTACAGGTAATTTTGGGAGTTGGCTATACATGGAGTGGCTTTTACCGTATCTaGCCAAAGACTCGCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: LTIFVFLQVILGVGYTWSGFYRI*PKTRCK Trigger: TTTACAGCGAGTCTTTGGCAAGATACGGTAAAAGCC...ACTCCATGTATAGCCAACTCCCAAAATTACCTGTAGGAACACAAAAATGGTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| CDS-3UTR CAA 90 bp | AACCAAAGGATACTCAATTTAGAGTCCCAATTTCAGGGTGGCACAAATTGTATGATATGGCACTTAACCTaGCAAATCCTTGCGGCAATT | + |
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Preference number: 5 (lower is better) Translates to: NQRILNLESQFQGGTNCMIWHLT*QILAAI Trigger: AATTGCCGCAAGGATTTGCAAGGTTAAGTGCCATAT...CATACAATTTGTGCCACCCTGAAATTGGGACTCTAAATTGAGTATCCTTTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059515.8 ENSMUST00000223396.2 |
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| CDS-3UTR CAA 90 bp | AAAAACTGCTCTTTGATTAATCAGCCAGCTTTAACTTTGTCCAGTGATGTCACTACAATGGCAATATACTaGCCCTGTGCTGCCACATTA | + |
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Preference number: 5 (lower is better) Translates to: KNCSLINQPALTLSSDVTTMAIY*PCAATL Trigger: TAATGTGGCAGCACAGGGCAAGTATATTGCCATTGT...AGTGACATCACTGGACAAAGTTAAAGCTGGCTGATTAATCAAAGAGCAGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223396.2 |
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| CDS CAA 72 bp | ATTGATGCTGGCGGTTGTCCTGGTAATTTAAACCTTTaGTATAACGTCAGGCCGGTGCCCAGCACGATCACG | + |
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Preference number: 6 (lower is better) Translates to: IDAGGCPGNLNL*YNVRPVPSTIT Trigger: CGTGATCGTGCTGGGCACCGGCCTGACGTTATACAAAAGGTTTAAATTACCAGGACAACCGCCAGCATCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059515.8 |
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| CDS CAA 90 bp | CCTCTTCCCATTGATGCTGGCGGTTGTCCTGGTAATTTAAACCTTTaGTATAAATCTTCCAGCGGTGTTATAGACGCACTTTCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PLPIDAGGCPGNLNL*YKSSSGVIDALSPP Trigger: TGGAGGAGAAAGTGCGTCTATAACACCGCTGGAAGATTTATACAAAAGGTTTAAATTACCAGGACAACCGCCAGCATCAATGGGAAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222365.2 ENSMUST00000223396.2 |
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| CDS CAA 72 bp | ATTGATGCTGGCGGTTGTCCTGGTAATTTAAACCTTTaGTATAAATCTTCCAGCGGTGTTATAGACGCACTT | + |
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Preference number: 6 (lower is better) Translates to: IDAGGCPGNLNL*YKSSSGVIDAL Trigger: AAGTGCGTCTATAACACCGCTGGAAGATTTATACAAAAGGTTTAAATTACCAGGACAACCGCCAGCATCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000222365.2 ENSMUST00000223396.2 |
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