Pregenerated sensors for GDI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015291Ensembl transcript IDs: ENSMUST00000015435.11, ENSMUST00000130581.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGCACTGGGAGAGGCCAGGGCAGCTCACTCTACAGCCCTAGGCTaGACAGAAAGGCTGAGGGCTCAGACAATTACTCCAAAGTTAATA | + |
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Preference number: 1 (lower is better) Translates to: PALGEARAAHSTALG*TERLRAQTITPKLI Trigger: TATTAACTTTGGAGTAATTGTCTGAGCCCTCAGCCTTTCTGTGCAGCCTAGGGCTGTAGAGTGAGCTGCCCTGGCCTCTCCCAGTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| 3UTR-3UTR CCA 90 bp | TTGCCAGCACTGGGAGAGGCCAGGGCAGCTCACTCTACAGCCCTAGGCTGCACAGAAGGACATACAAGTTaGGGAGAGGGGAACAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LPALGEARAAHSTALGCTEGHTS*GEGNRG Trigger: GCCCCTGTTCCCCTCTCCCCAACTTGTATGTCCTTC...TGTGCAGCCTAGGGCTGTAGAGTGAGCTGCCCTGGCCTCTCCCAGTGCTGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| 3UTR-3UTR CCA 90 bp | TACAGCCCTAGGCTGCACAGAAAGGCTGAGGGCTCAGACAATTACTCCAAAGTTCCAACACCTAAGAGTTaGGGGAGGAGATGGGTATCT | + |
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Preference number: 2 (lower is better) Translates to: YSPRLHRKAEGSDNYSKVPTPKS*GRRWVS Trigger: AGATACCCATCTCCTCCCCCAACTCTTAGGTGTTGG...AACTTTGGAGTAATTGTCTGAGCCCTCAGCCTTTCTGTGCAGCCTAGGGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTAGGCTGCACAGAAAGGCTGAGGGCTCAGACAATTACTCCAAAGTTAATAGGGGAAGCAGAAGATaGTGGAAACAAGGATGCCTA | + |
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Preference number: 2 (lower is better) Translates to: SPRLHRKAEGSDNYSKVNRGSRR*WKQGCL Trigger: TAGGCATCCTTGTTTCCAGCATCTTCTGCTTCCCCT...ATTAACTTTGGAGTAATTGTCTGAGCCCTCAGCCTTTCTGTGCAGCCTAGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| 3UTR-3UTR CAA 90 bp | TTGCCAGCACTGGGAGAGGCCAGGGCAGCTCACTCTACAGCCCTAGGCTGCACATCCCAAACAGCAAAATaGGGGGTGCACGATGCACAC | + |
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Preference number: 3 (lower is better) Translates to: LPALGEARAAHSTALGCTSQTAK*GVHDAH Trigger: GTGTGCATCGTGCACCCCCAATTTTGCTGTTTGGGA...TGTGCAGCCTAGGGCTGTAGAGTGAGCTGCCCTGGCCTCTCCCAGTGCTGGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| 3UTR GCA 72 bp | GGAGAGGCCAGGGCAGCTCACTCTACAGCCCTAGGCTaGACAGAAAGGCTGAGGGCTCAGACAATTACTCCA | + |
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Preference number: 3 (lower is better) Translates to: GEARAAHSTALG*TERLRAQTITP Trigger: TGGAGTAATTGTCTGAGCCCTCAGCCTTTCTGTGCAGCCTAGGGCTGTAGAGTGAGCTGCCCTGGCCTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAAGAAGGACATACAAGTaGGGGAGAGGGGAACAGGGG | + |
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Preference number: 3 (lower is better) Translates to: KQKMLETRMPSHTISPALRRTYK*GRGEQG Trigger: CCCCTGTTCCCCTCTCCCCAACTTGTATGTCCTTCT...TAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| 3UTR-3UTR CAA 90 bp | CAACACCTAAGAGTTGGGGGAGGAGATGGGTATCTCCAAAGGCCACTACATTTGAGAAGGACATACAAGTaGGGGAGAGGGGAACAGGGG | + |
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Preference number: 3 (lower is better) Translates to: QHLRVGGGDGYLQRPLHLRRTYK*GRGEQG Trigger: CCCCTGTTCCCCTCTCCCCAACTTGTATGTCCTTCT...CAAATGTAGTGGCCTTTGGAGATACCCATCTCCTCCCCCAACTCTTAGGTGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| 3UTR GCA 72 bp | CACTCCTTCCCAAACAGCAAAATTGGGGGTGCACGATaGACACACACATGCACACACATGTACACACGCACA | + |
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Preference number: 3 (lower is better) Translates to: HSFPNSKIGGAR*THTCTHMYTRT Trigger: TGTGCGTGTGTACATGTGTGTGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGTTTGGGAAGGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| 3UTR GCA 72 bp | TTTCCTCCACTCCTTCCCAAACAGCAAAATTGGGGGTaGACGATGCACACACACATGCACACACATGTACAC | + |
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Preference number: 3 (lower is better) Translates to: FPPLLPKQQNWG*TMHTHMHTHVH Trigger: GTGTACATGTGTGTGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGTTTGGGAAGGAGTGGAGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR TCA 90 bp | CAACCTCCAGAGGGGGTCACACCTAAATCTTCTCCCATCCCAGGCTTTGCCAGCTCGGCCCCGGCCCATTaGTTCAGGGGGCCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QPPEGVTPKSSPIPGFASSAPAH*FRGPFQ Trigger: CTGGAAGGGCCCCCTGAATCAATGGGCCGGGGCCGA...GCTGGCAAAGCCTGGGATGGGAGAAGATTTAGGTGTGACCCCCTCTGGAGGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | TTGCCAGCACTGGGAGAGGCCAGGGCAGCTCACTCTACAGCCCTAGGCTGCACAATGTTCCCCCATAGATaGCACTCAATCTGGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LPALGEARAAHSTALGCTMFPHR*HSIWQS Trigger: GCTTTGCCAGATTGAGTGCCATCTATGGGGGAACAT...TGTGCAGCCTAGGGCTGTAGAGTGAGCTGCCCTGGCCTCTCCCAGTGCTGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | AAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAAATCTGGCAAAGCCCTaGGGCAGCTCACCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: KQKMLETRMPSHTISPALNLAKP*GSSPRP Trigger: TGGCCTGGGTGAGCTGCCCCAGGGCTTTGCCAGATT...TAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR GCA 90 bp | ACAGCAAAATTGGGGGTGCACGATGCACACACACATGCACACACATGTACACACCACAGATCAGCTGCTTaGAGCGGGCCACCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: TAKLGVHDAHTHAHTCTHHRSAA*SGPPLP Trigger: AGGGAGAGGTGGCCCGCTGCAAGCAGCTGATCTGTG...GTGTGTACATGTGTGTGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR GCA 90 bp | AAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGGATCACAGATCAGCTaGTTGCAGCGGGCCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: KMLETRMPSHTISPALEKGSQIS*LQRATS Trigger: AGAGGTGGCCCGCTGCAAGCAGCTGATCTGTGATCC...CTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS-3UTR CCA 90 bp | AGGGGAAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGAGATGGCACTCAATCTaGCAAAGCCCTGGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RGSRRCWKQGCLAIPSPLRWHSI*QSPGAA Trigger: AGCTGCCCCAGGGCTTTGCCAGATTGAGTGCCATCT...CAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR TCA 90 bp | AGGGGAAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGGAACACCTGACTCTCTaGACCATCATCAATGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RGSRRCWKQGCLAIPSPLEHLTL*TIINGL Trigger: GAGCCCATTGATGATGGTTCAGAGAGTCAGGTGTTC...CAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAAGTTGGGGAACACCTGACTCTCTaGACCATCATCAATGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RMPSHTISPALEKDIQVGEHLTL*TIINGL Trigger: GAGCCCATTGATGATGGTTCAGAGAGTCAGGTGTTC...CCCAACTTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCCAAACAGCAAAATTGGGGGTGCACGATGCACACACACATGCACACACAGATGTATTTGCCCTGTaGGGCCACGTTGTGCGCATA | + |
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Preference number: 4 (lower is better) Translates to: PSQTAKLGVHDAHTHAHTDVFAL*GHVVRI Trigger: TATGCGCACAACGTGGCCGCACAGGGCAAATACATC...TGTGTGTGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGTTTGGGAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | ATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAAGTTGGGGAGAGACATCACGCATGCTaGTGTTCTGGGGATCAACAC | + |
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Preference number: 4 (lower is better) Translates to: MPSHTISPALEKDIQVGERHHAC*CSGDQH Trigger: GTGTTGATCCCCAGAACACCAGCATGCGTGATGTCT...CTCCCCAACTTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | ATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAAGTTGGGGAGGGTCTGGGATGTAACTaGGATCACAGATCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: MPSHTISPALEKDIQVGEGLGCN*DHRSAA Trigger: AGCAGCTGATCTGTGATCCCAGTTACATCCCAGACC...CTCCCCAACTTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS-3UTR CCA 90 bp | ATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAAGTTGGGGAGATGATGCGAATAACCTaGCCAGCCTTTTGCACACGG | + |
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Preference number: 4 (lower is better) Translates to: MPSHTISPALEKDIQVGEMMRIT*PAFCTR Trigger: CCGTGTGCAAAAGGCTGGCCAGGTTATTCGCATCAT...CTCCCCAACTTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS-3UTR CCA 90 bp | TCCACTCCTTCCCAAACAGCAAAATTGGGGGTGCACGATGCACACACACATGCACAGTGGTGCTGGCAATaGCGATGTATTTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: STPSQTAKLGVHDAHTHAQWCWQ*RCICPV Trigger: CACAGGGCAAATACATCGCCATTGCCAGCACCACTG...TGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGTTTGGGAAGGAGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR TCA 90 bp | CCTTCCCAAACAGCAAAATTGGGGGTGCACGATGCACACACACATGCACACACAGCTGACCATTGGCCATaGGGAATTTGGGGATCAAGT | + |
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Preference number: 4 (lower is better) Translates to: PSQTAKLGVHDAHTHAHTADHWP*GIWGSS Trigger: ACTTGATCCCCAAATTCCTCATGGCCAATGGTCAGC...TGTGTGTGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGTTTGGGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR GCA 90 bp | AAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAGGGTTTCGGTCCATGTaGAGCACCTTCTTTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: KQKMLETRMPSHTISPALGFRSM*STFFPF Trigger: GAATGGAAAGAAGGTGCTGCACATGGACCGAAACCC...TAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR GCA 90 bp | ACAGCCCTAGGCTGCACAGAAAGGCTGAGGGCTCAGACAATTACTCCAAAGTTAATAAATAGGGGCTCTTaGCATACCGGGCCAGGGACT | + |
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Preference number: 4 (lower is better) Translates to: TALGCTERLRAQTITPKLINRGS*HTGPGT Trigger: AGTCCCTGGCCCGGTATGGCAAGAGCCCCTATTTAT...TAACTTTGGAGTAATTGTCTGAGCCCTCAGCCTTTCTGTGCAGCCTAGGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | ACAGCAAAATTGGGGGTGCACGATGCACACACACATGCACACACATGTACACACCGCATGCTGGTGTTCTaGGGATCAACACCCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: TAKLGVHDAHTHAHTCTHRMLVF*GSTPSK Trigger: CTTTGAGGGTGTTGATCCCCAGAACACCAGCATGCG...GTGTGTACATGTGTGTGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | AAGAGTTGGGGGAGGAGATGGGTATCTCCAAAGGCCACTACATTTGGGACTAAGCTGCAGTCTCTACAGTaGTGCTGGCAATGGCGATGT | + |
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Preference number: 4 (lower is better) Translates to: KSWGRRWVSPKATTFGTKLQSLQ*CWQWRC Trigger: ACATCGCCATTGCCAGCACCACTGTAGAGACTGCAG...CTTAGTCCCAAATGTAGTGGCCTTTGGAGATACCCATCTCCTCCCCCAACTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR TCA 90 bp | ACAGCAAAATTGGGGGTGCACGATGCACACACACATGCACACACATGTACACACGGCCCTTCCAGTATCTaGAAGCGCTTATATAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TAKLGVHDAHTHAHTCTHGPSSI*KRLYSS Trigger: GGAGCTATATAAGCGCTTTCAGATACTGGAAGGGCC...GTGTGTACATGTGTGTGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR TCA 90 bp | GAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAATGCCCTCTACCACCTTaGAGTCCAGATATCGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: ETRMPSHTISPALEKDIQCPLPP*SPDIES Trigger: TGACTCGATATCTGGACTTCAAGGTGGTAGAGGGCA...TTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR TCA 90 bp | AAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTACTGTTGACCTGGTTCTaGGGGATGATAATTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KQKMLETRMPSHTISPALLLTWF*GMIIWQ Trigger: CTGCCAAATTATCATCCCTCAGAACCAGGTCAACAG...TAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS-3UTR TCA 90 bp | AAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTACAGGAACAGAACACCTaGCTCTCTGAACCATCATCA | + |
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Preference number: 4 (lower is better) Translates to: KQKMLETRMPSHTISPALQEQNT*LSEPSS Trigger: TGATGATGGTTCAGAGAGTCAGGTGTTCTGTTCCTG...TAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS-3UTR TCA 90 bp | AGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAAGTTGGGTTCCTTTTCTGGTTCTaGCTTCCTGTTGACCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: RMPSHTISPALEKDIQVGFLFWF*LPVDLV Trigger: AACCAGGTCAACAGGAAGTCAGAACCAGAAAAGGAA...CCCAACTTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130581.2 |
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| CDS-3UTR CCA 90 bp | GAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAAAGGCCTCAGTCTCGGTaGATGGCACTTTGTAGATCT | + |
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Preference number: 4 (lower is better) Translates to: ETRMPSHTISPALEKDIQRPQSR*MALCRS Trigger: AGATCTACAAAGTGCCATCCACCGAGACTGAGGCCT...TTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | AAGAGTTGGGGGAGGAGATGGGTATCTCCAAAGGCCACTACATTTGGGACTAAGGGTCTGGGATGTAACTaGGATCACAGATCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: KSWGRRWVSPKATTFGTKGLGCN*DHRSAA Trigger: AGCAGCTGATCTGTGATCCCAGTTACATCCCAGACC...CTTAGTCCCAAATGTAGTGGCCTTTGGAGATACCCATCTCCTCCCCCAACTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR GCA 90 bp | CCTTCCCAAACAGCAAAATTGGGGGTGCACGATGCACACACACATGCACACACATTCCTTTTCTGGTTCTaGAGTCTCTACAGTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PSQTAKLGVHDAHTHAHTFLFWF*SLYSGA Trigger: AGCACCACTGTAGAGACTGCAGAACCAGAAAAGGAA...TGTGTGTGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGTTTGGGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | AGCCCTAGGCTGCACAGAAAGGCTGAGGGCTCAGACAATTACTCCAAAGTTAATCTCAGTCTCGGTGGATaGCACTTTGTAGATCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SPRLHRKAEGSDNYSKVNLSLGG*HFVDLA Trigger: GGCAAGATCTACAAAGTGCCATCCACCGAGACTGAG...ATTAACTTTGGAGTAATTGTCTGAGCCCTCAGCCTTTCTGTGCAGCCTAGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | AAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGCAAACTTCTGGTCAATaGGTTCCAACAGCTCCAATG | + |
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Preference number: 4 (lower is better) Translates to: KMLETRMPSHTISPALEKQTSGQ*VPTAPM Trigger: CATTGGAGCTGTTGGAACCCATTGACCAGAAGTTTG...CTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS-3UTR CCA 90 bp | AAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAATAGCCACAAACTTCTaGTCAATGGGTTCCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: KQKMLETRMPSHTISPALIATNF*SMGSNS Trigger: GCTGTTGGAACCCATTGACCAGAAGTTTGTGGCTAT...TAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS-3UTR TCA 90 bp | ACAGCAAAATTGGGGGTGCACGATGCACACACACATGCACACACATGTACACACTTCCATTCACAGACATaGTGCCAGACAGGATGCATT | + |
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Preference number: 4 (lower is better) Translates to: TAKLGVHDAHTHAHTCTHFHSQT*CQTGCI Trigger: AATGCATCCTGTCTGGCATCATGTCTGTGAATGGAA...GTGTGTACATGTGTGTGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR GCA 90 bp | CACACAAAGTTCTCTTTCCCTAGAACAAGGACAGACCAAGAAAGAGGATACTATGGATCACAGATCAGCTaGTTGCAGCGGGCCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: HTKFSFPRTRTDQERGYYGSQIS*LQRATS Trigger: AGAGGTGGCCCGCTGCAAGCAGCTGATCTGTGATCC...ATAGTATCCTCTTTCTTGGTCTGTCCTTGTTCTAGGGAAAGAGAACTTTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | AAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTACACCCTCAAAGGTTTTaGGGTCATTCTCATCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: KQKMLETRMPSHTISPALHPQRF*GHSHQS Trigger: ACTTTGATGAGAATGACCCCAAAACCTTTGAGGGTG...TAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | GAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAACAAACTTCTGGTCAATaGGTTCCAACAGCTCCAATG | + |
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Preference number: 4 (lower is better) Translates to: ETRMPSHTISPALEKDIQQTSGQ*VPTAPM Trigger: CATTGGAGCTGTTGGAACCCATTGACCAGAAGTTTG...TTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS-3UTR GCA 90 bp | CACACAAAGTTCTCTTTCCCTAGAACAAGGACAGACCAAGAAAGAGGATACTATCCAGGTAGTCATCAGTaGGGTAGAGCGCCAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: HTKFSFPRTRTDQERGYYPGSHQ*GRAPRH Trigger: ATGCCTTGGCGCTCTACCGCACTGATGACTACCTGG...ATAGTATCCTCTTTCTTGGTCTGTCCTTGTTCTAGGGAAAGAGAACTTTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR CCA 90 bp | AGCCCTAGGCTGCACAGAAAGGCTGAGGGCTCAGACAATTACTCCAAAGTTAATATAGCCACAAACTTCTaGTCAATGGGTTCCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: SPRLHRKAEGSDNYSKVNIATNF*SMGSNS Trigger: GCTGTTGGAACCCATTGACCAGAAGTTTGTGGCTAT...ATTAACTTTGGAGTAATTGTCTGAGCCCTCAGCCTTTCTGTGCAGCCTAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS-3UTR TCA 90 bp | CCCAAACCATCCCTAAGGTTAAGGATATGGTCAGTGAATAAAATCAATAAGGTGCCTCTCCCTCAGATTTaGCACCCACCACCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKPSLRLRIWSVNKINKVPLPQI*HPPPCH Trigger: ATGGCAAGGTGGTGGGTGTCAAATCTGAGGGAGAGG...CACCTTATTGATTTTATTCACTGACCATATCCTTAACCTTAGGGATGGTTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR GCA 90 bp | AGAAATTCAAAACAGATCAACCTCCAGAGGGGGTCACACCTAAATCTTCTCCCACAGTCTCTACAGTGGTaGTGGCAATGGCGATGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RNSKQINLQRGSHLNLLPQSLQW*WQWRCI Trigger: AATACATCGCCATTGCCAGCACCACTGTAGAGACTG...TGGGAGAAGATTTAGGTGTGACCCCCTCTGGAGGTTGATCTGTTTTGAATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR GCA 90 bp | AGGGGAAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGAGACATCATTCTGTTTaGGCTTCATGTTCTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSRRCWKQGCLAIPSPLRHHSV*ASCSQN Trigger: ATTTTGAGAACATGAAGCGCAAACAGAATGATGTCT...CAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS-3UTR CCA 90 bp | TACAGCCCTAGGCTGCACAGAAAGGCTGAGGGCTCAGACAATTACTCCAAAGTTGATGATGTCATCCACTaGTTTGTTCAGCATGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: YSPRLHRKAEGSDNYSKVDDVIH*FVQHVC Trigger: ACATACATGCTGAACAAACCAGTGGATGACATCATC...AACTTTGGAGTAATTGTCTGAGCCCTCAGCCTTTCTGTGCAGCCTAGGGCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR TCA 90 bp | GAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAAGTTTGTAGATATCTTTaGTGTCATTGCAGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETRMPSHTISPALEKDIQVCRYL*CHCRLS Trigger: AGACAACCTGCAATGACATCAAAGATATCTACAAAC...TTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTTTCCCTAGAACAAGGACAGACCAAGAAAGAGGATACTATCCAACTCCCAGCGCATAGGAGATCATaGACACATAGATGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLEQGQTKKEDTIQLPAHRRS*THRCLT Trigger: AGTCAGACATCTATGTGTGCATGATCTCCTATGCGC...TGGGAGTTGGATAGTATCCTCTTTCTTGGTCTGTCCTTGTTCTAGGGAAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR GCA 90 bp | AGAAATTCAAAACAGATCAACCTCCAGAGGGGGTCACACCTAAATCTTCTCCCAGCACTTTGTAGATCTTaGCCCCCTTATATACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNSKQINLQRGSHLNLLPALCRS*PPYIQS Trigger: GCTTTGTATATAAGGGGGGCAAGATCTACAAAGTGC...TGGGAGAAGATTTAGGTGTGACCCCCTCTGGAGGTTGATCTGTTTTGAATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCATCCCTAAGGTTAAGGATATGGTCAGTGAATAAAATCAATAAGGTGATGATGCGAATAACCTaGCCAGCCTTTTGCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: PKPSLRLRIWSVNKINKVMMRIT*PAFCTR Trigger: CCGTGTGCAAAAGGCTGGCCAGGTTATTCGCATCAT...CACCTTATTGATTTTATTCACTGACCATATCCTTAACCTTAGGGATGGTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCTAGGCTGCACAGAAAGGCTGAGGGCTCAGACAATTACTCCAAAGTTAATAGACATCATTCTGTTTaGGCTTCATGTTCTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPRLHRKAEGSDNYSKVNRHHSV*ASCSQN Trigger: ATTTTGAGAACATGAAGCGCAAACAGAATGATGTCT...ATTAACTTTGGAGTAATTGTCTGAGCCCTCAGCCTTTCTGTGCAGCCTAGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR TCA 90 bp | CCCAAACCATCCCTAAGGTTAAGGATATGGTCAGTGAATAAAATCAATAAGGTGAAATCTATGACATCTTaGCCCAGGTCAAACTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PKPSLRLRIWSVNKINKVKSMTS*PRSNFR Trigger: CCGGAAGTTTGACCTGGGTCAAGATGTCATAGATTT...CACCTTATTGATTTTATTCACTGACCATATCCTTAACCTTAGGGATGGTTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR TCA 90 bp | AAACCATCCCTAAGGTTAAGGATATGGTCAGTGAATAAAATCAATAAGGTGGGTCAGGAACAGAACACCTaGCTCTCTGAACCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KPSLRLRIWSVNKINKVGQEQNT*LSEPSS Trigger: TGATGATGGTTCAGAGAGTCAGGTGTTCTGTTCCTG...ACCCACCTTATTGATTTTATTCACTGACCATATCCTTAACCTTAGGGATGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCATCCCTAAGGTTAAGGATATGGTCAGTGAATAAAATCAATAAGGTGCTCAACTTCCTTTTCTaGTTCTGCAGTCTCTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKPSLRLRIWSVNKINKVLNFLF*FCSLYS Trigger: ACTGTAGAGACTGCAGAACCAGAAAAGGAAGTTGAG...CACCTTATTGATTTTATTCACTGACCATATCCTTAACCTTAGGGATGGTTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR TCA 90 bp | AAACCATCCCTAAGGTTAAGGATATGGTCAGTGAATAAAATCAATAAGGTGGGTGTTTGTAGATATCTTTaGTGTCATTGCAGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPSLRLRIWSVNKINKVGVCRYL*CHCRLS Trigger: AGACAACCTGCAATGACATCAAAGATATCTACAAAC...ACCCACCTTATTGATTTTATTCACTGACCATATCCTTAACCTTAGGGATGGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGCACTGGGAGAGGCCAGGGCAGCTCACTCTACAGCCCTAGGCTGCACATCACAGATCAGCTGCTaGCAGCGGGCCACCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPALGEARAAHSTALGCTSQISC*QRATSP Trigger: GGGAGAGGTGGCCCGCTGCAAGCAGCTGATCTGTGA...TGTGCAGCCTAGGGCTGTAGAGTGAGCTGCCCTGGCCTCTCCCAGTGCTGGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | AAGCAGAAGATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTATCACAGATCAGCTGCTaGCAGCGGGCCACCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KQKMLETRMPSHTISPALSQISC*QRATSP Trigger: GGGAGAGGTGGCCCGCTGCAAGCAGCTGATCTGTGA...TAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCATCTTCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS GCA 90 bp | ATGCAGGCTCAACTTCCTTTTCTGGTTCTGCAGTCTCTACAGTGGTaGTGGCAATGGCGATGTATTTGCCCTGTGCGGCCACGTTGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: MQAQLPFLVLQSLQW*WQWRCICPVRPRCA Trigger: CGCACAACGTGGCCGCACAGGGCAAATACATCGCCATTGCCAGCACCACTGTAGAGACTGCAGAACCAGAAAAGGAAGTTGAGCCTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CCA 90 bp | GATACAGATGATGCGAATAACCTGGCCAGCCTTTTGCACACGGTCTaGGATGTAACTGGGATCACAGATCAGCTGCTTGCAGCGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DTDDANNLASLLHTV*DVTGITDQLLAAGH Trigger: GTGGCCCGCTGCAAGCAGCTGATCTGTGATCCCAGTTACATCCCAGACCGTGTGCAAAAGGCTGGCCAGGTTATTCGCATCATCTGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS CCA 90 bp | CAGGCTCAACTTCCTTTTCTGGTTCTGCAGTCTCTACAGTGGTGCTaGCAATGGCGATGTATTTGCCCTGTGCGGCCACGTTGTGCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QAQLPFLVLQSLQWC*QWRCICPVRPRCAH Trigger: ATGCGCACAACGTGGCCGCACAGGGCAAATACATCGCCATTGCCAGCACCACTGTAGAGACTGCAGAACCAGAAAAGGAAGTTGAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | AGAAATTCAAAACAGATCAACCTCCAGAGGGGGTCACACCTAAATCTTCTCCCACTCGGCCCCGGCCCATaGATTCAGGGGGCCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RNSKQINLQRGSHLNLLPLGPGP*IQGALP Trigger: TGGAAGGGCCCCCTGAATCAATGGGCCGGGGCCGAG...TGGGAGAAGATTTAGGTGTGACCCCCTCTGGAGGTTGATCTGTTTTGAATTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | AGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAAGTTGGGAACCTGGCCAGCCTTTaGCACACGGTCTGGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: RMPSHTISPALEKDIQVGNLASL*HTVWDV Trigger: TACATCCCAGACCGTGTGCAAAAGGCTGGCCAGGTT...CCCAACTTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS CCA 90 bp | CAACTTCCTTTTCTGGTTCTGCAGTCTCTACAGTGGTGCTGGCAATaGCGATGTATTTGCCCTGTGCGGCCACGTTGTGCGCATAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QLPFLVLQSLQWCWQ*RCICPVRPRCAHRR Trigger: TCTCCTATGCGCACAACGTGGCCGCACAGGGCAAATACATCGCCATTGCCAGCACCACTGTAGAGACTGCAGAACCAGAAAAGGAAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CCA 90 bp | CCAATGCAGGCTCAACTTCCTTTTCTGGTTCTGCAGTCTCTACAGTaGTGCTGGCAATGGCGATGTATTTGCCCTGTGCGGCCACGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PMQAQLPFLVLQSLQ*CWQWRCICPVRPRC Trigger: ACAACGTGGCCGCACAGGGCAAATACATCGCCATTGCCAGCACCACTGTAGAGACTGCAGAACCAGAAAAGGAAGTTGAGCCTGCATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS GCA 90 bp | GGGTTCCAACAGCTCCAATGCAGGCTCAACTTCCTTTTCTGGTTCTaGAGTCTCTACAGTGGTGCTGGCAATGGCGATGTATTTGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GFQQLQCRLNFLFWF*SLYSGAGNGDVFAL Trigger: CAGGGCAAATACATCGCCATTGCCAGCACCACTGTAGAGACTGCAGAACCAGAAAAGGAAGTTGAGCCTGCATTGGAGCTGTTGGAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | ATGCTGGAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACTTGACACCCACCACCTaGCCATTTTCCATGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: MLETRMPSHTISPALEKDLTPTT*PFSMMM Trigger: CATCATCATGGAAAATGGCAAGGTGGTGGGTGTCAA...GTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTCCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CCA 90 bp | GTCAATGGGTTCCAACAGCTCCAATGCAGGCTCAACTTCCTTTTCTaGTTCTGCAGTCTCTACAGTGGTGCTGGCAATGGCGATGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: VNGFQQLQCRLNFLF*FCSLYSGAGNGDVF Trigger: AAATACATCGCCATTGCCAGCACCACTGTAGAGACTGCAGAACCAGAAAAGGAAGTTGAGCCTGCATTGGAGCTGTTGGAACCCATTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | AAATTCAAAACAGATCAACCTCCAGAGGGGGTCACACCTAAATCTTCTCCCATCACCTCTCCCTCAGATTaGACACCCACCACCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KFKTDQPPEGVTPKSSPITSPSD*TPTTLP Trigger: TGGCAAGGTGGTGGGTGTCAAATCTGAGGGAGAGGT...GATGGGAGAAGATTTAGGTGTGACCCCCTCTGGAGGTTGATCTGTTTTGAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | AGAAATTCAAAACAGATCAACCTCCAGAGGGGGTCACACCTAAATCTTCTCCCAAACCTGGCCAGCCTTTaGCACACGGTCTGGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: RNSKQINLQRGSHLNLLPNLASL*HTVWDV Trigger: TACATCCCAGACCGTGTGCAAAAGGCTGGCCAGGTT...TGGGAGAAGATTTAGGTGTGACCCCCTCTGGAGGTTGATCTGTTTTGAATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | ACAGCCCTAGGCTGCACAGAAAGGCTGAGGGCTCAGACAATTACTCCAAAGTTAACACCCTCAAAGGTTTaGGGGTCATTCTCATCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TALGCTERLRAQTITPKLTPSKV*GSFSSK Trigger: CTTTGATGAGAATGACCCCAAAACCTTTGAGGGTGT...TAACTTTGGAGTAATTGTCTGAGCCCTCAGCCTTTCTGTGCAGCCTAGGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | ACAGCAAAATTGGGGGTGCACGATGCACACACACATGCACACACATGTACACACGAAATCTATGACATCTaGACCCAGGTCAAACTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TAKLGVHDAHTHAHTCTHEIYDI*TQVKLP Trigger: CGGAAGTTTGACCTGGGTCAAGATGTCATAGATTTC...GTGTGTACATGTGTGTGCATGTGTGTGTGCATCGTGCACCCCCAATTTTGCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | ATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAAGTTGGGGAGAAGACATCATTCTGTTaGCGCTTCATGTTCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: MPSHTISPALEKDIQVGEKTSFC*RFMFSK Trigger: TTTTGAGAACATGAAGCGCAAACAGAATGATGTCTT...CTCCCCAACTTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS CCA 90 bp | TTTGACACCCACCACCTTGCCATTTTCCATGATGATGTCATCCACTaGTTTGTTCAGCATGTATGTTCCCCCATAGATGGCACTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: FDTHHLAIFHDDVIH*FVQHVCSPIDGTQS Trigger: AGATTGAGTGCCATCTATGGGGGAACATACATGCTGAACAAACCAGTGGATGACATCATCATGGAAAATGGCAAGGTGGTGGGTGTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | CACACAAAGTTCTCTTTCCCTAGAACAAGGACAGACCAAGAAAGAGGATACTATCTGCCCTCTACCACCTaGAAGTCCAGATATCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HTKFSFPRTRTDQERGYYLPSTT*KSRYRV Trigger: GACTCGATATCTGGACTTCAAGGTGGTAGAGGGCAG...ATAGTATCCTCTTTCTTGGTCTGTCCTTGTTCTAGGGAAAGAGAACTTTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS-3UTR CAA 90 bp | GAAACAAGGATGCCTAGCCATACCATCTCCCCTGCCCTAGAGAAGGACATACAAAAGACATCATTCTGTTaGCGCTTCATGTTCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ETRMPSHTISPALEKDIQKTSFC*RFMFSK Trigger: TTTTGAGAACATGAAGCGCAAACAGAATGATGTCTT...TTGTATGTCCTTCTCTAGGGCAGGGGAGATGGTATGGCTAGGCATCCTTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCATCCCTAAGGTTAAGGATATGGTCAGTGAATAAAATCAATAAGGTGATGTCATCCACTGGTTaGTTCAGCATGTATGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PKPSLRLRIWSVNKINKVMSSTG*FSMYVP Trigger: GGGAACATACATGCTGAACAAACCAGTGGATGACAT...CACCTTATTGATTTTATTCACTGACCATATCCTTAACCTTAGGGATGGTTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CCA 72 bp | CCTGGCCAGCCTTTTGCACACGGTCTGGGATGTAACTaGGATCACAGATCAGCTGCTTGCAGCGGGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: PGQPFAHGLGCN*DHRSAACSGPP Trigger: AGGTGGCCCGCTGCAAGCAGCTGATCTGTGATCCCAGTTACATCCCAGACCGTGTGCAAAAGGCTGGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS GCA 72 bp | CAGTCTCTACAGTGGTGCTGGCAATGGCGATGTATTTaGCCTGTGCGGCCACGTTGTGCGCATAGGAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: QSLQWCWQWRCI*PVRPRCAHRRS Trigger: TGATCTCCTATGCGCACAACGTGGCCGCACAGGGCAAATACATCGCCATTGCCAGCACCACTGTAGAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CCA 72 bp | TTTCTGGTTCTGCAGTCTCTACAGTGGTGCTGGCAATaGCGATGTATTTGCCCTGTGCGGCCACGTTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: FLVLQSLQWCWQ*RCICPVRPRCA Trigger: CGCACAACGTGGCCGCACAGGGCAAATACATCGCCATTGCCAGCACCACTGTAGAGACTGCAGAACCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CCA 72 bp | CTTCCTTTTCTGGTTCTGCAGTCTCTACAGTGGTGCTaGCAATGGCGATGTATTTGCCCTGTGCGGCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: LPFLVLQSLQWC*QWRCICPVRPR Trigger: ACGTGGCCGCACAGGGCAAATACATCGCCATTGCCAGCACCACTGTAGAGACTGCAGAACCAGAAAAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS GCA 72 bp | AGGCCTCAGTCTCGGTGGATGGCACTTTGTAGATCTTaGCCCCCTTATATACAAAGCTGCCCTCTACCACCT | + |
|
Preference number: 6 (lower is better) Translates to: RPQSRWMALCRS*PPYIQSCPLPP Trigger: AGGTGGTAGAGGGCAGCTTTGTATATAAGGGGGGCAAGATCTACAAAGTGCCATCCACCGAGACTGAGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CCA 72 bp | GACCCAGGTCAAACTTCCGGTAGACATCACGCATGCTaGTGTTCTGGGGATCAACACCCTCAAAGGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DPGQTSGRHHAC*CSGDQHPQRFW Trigger: CCAAAACCTTTGAGGGTGTTGATCCCCAGAACACCAGCATGCGTGATGTCTACCGGAAGTTTGACCTGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CCA 72 bp | GATGCGAATAACCTGGCCAGCCTTTTGCACACGGTCTaGGATGTAACTGGGATCACAGATCAGCTGCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DANNLASLLHTV*DVTGITDQLLA Trigger: TGCAAGCAGCTGATCTGTGATCCCAGTTACATCCCAGACCGTGTGCAAAAGGCTGGCCAGGTTATTCGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
||
| CDS CCA 72 bp | GCTCAACTTCCTTTTCTGGTTCTGCAGTCTCTACAGTaGTGCTGGCAATGGCGATGTATTTGCCCTGTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AQLPFLVLQSLQ*CWQWRCICPVR Trigger: CCGCACAGGGCAAATACATCGCCATTGCCAGCACCACTGTAGAGACTGCAGAACCAGAAAAGGAAGTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CAA 72 bp | CGGGCCACCTCTCCCTCAGATTTGACACCCACCACCTaGCCATTTTCCATGATGATGTCATCCACTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RATSPSDLTPTT*PFSMMMSSTGL Trigger: CAAACCAGTGGATGACATCATCATGGAAAATGGCAAGGTGGTGGGTGTCAAATCTGAGGGAGAGGTGGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CAA 90 bp | TGCTTGCAGCGGGCCACCTCTCCCTCAGATTTGACACCCACCACCTaGCCATTTTCCATGATGATGTCATCCACTGGTTTGTTCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: CLQRATSPSDLTPTT*PFSMMMSSTGLFSM Trigger: CATGCTGAACAAACCAGTGGATGACATCATCATGGAAAATGGCAAGGTGGTGGGTGTCAAATCTGAGGGAGAGGTGGCCCGCTGCAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS GCA 72 bp | CTTGACCCAGGTCAAACTTCCGGTAGACATCACGCATaGTGGTGTTCTGGGGATCAACACCCTCAAAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LDPGQTSGRHHA*WCSGDQHPQRF Trigger: AAACCTTTGAGGGTGTTGATCCCCAGAACACCAGCATGCGTGATGTCTACCGGAAGTTTGACCTGGGTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
||
| CDS CCA 72 bp | TTCCAACAGCTCCAATGCAGGCTCAACTTCCTTTTCTaGTTCTGCAGTCTCTACAGTGGTGCTGGCAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: FQQLQCRLNFLF*FCSLYSGAGNG Trigger: GCCATTGCCAGCACCACTGTAGAGACTGCAGAACCAGAAAAGGAAGTTGAGCCTGCATTGGAGCTGTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS CAA 72 bp | GAGGATACAGATGATGCGAATAACCTGGCCAGCCTTTaGCACACGGTCTGGGATGTAACTGGGATCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: EDTDDANNLASL*HTVWDVTGITD Trigger: ATCTGTGATCCCAGTTACATCCCAGACCGTGTGCAAAAGGCTGGCCAGGTTATTCGCATCATCTGTATCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015435.11 ENSMUST00000130581.2 |
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| CDS CCA 72 bp | TGCTGGTGTTCTGGGGATCAACACCCTCAAAGGTTTTaGGGTCATTCTCATCAAAGTTTGCCACAAACACCA | + |
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Preference number: 6 (lower is better) Translates to: CWCSGDQHPQRF*GHSHQSLPQTP Trigger: TGGTGTTTGTGGCAAACTTTGATGAGAATGACCCCAAAACCTTTGAGGGTGTTGATCCCCAGAACACCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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| CDS CAA 72 bp | ATGCTGGTGTTCTGGGGATCAACACCCTCAAAGGTTTaGGGGTCATTCTCATCAAAGTTTGCCACAAACACC | + |
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Preference number: 6 (lower is better) Translates to: MLVFWGSTPSKV*GSFSSKFATNT Trigger: GGTGTTTGTGGCAAACTTTGATGAGAATGACCCCAAAACCTTTGAGGGTGTTGATCCCCAGAACACCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015435.11 |
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