RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GDF7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037660

Ensembl transcript IDs: ENSMUST00000037313.6, ENSMUST00000220073.2

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CGCCGCCCAGGGGCTCGGCGGCCCGGGAGTGCAGCAGGTGAGCTGTaGCAGCCTCGTCCGGGCACGTGGACAGCAGCAGCCGCGGAAGGA +
Preference number: 5 (lower is better)
Translates to: RRPGARRPGSAAGEL*QPRPGTWTAAAAEG
Trigger: TCCTTCCGCGGCTGCTGCTGTCCACGTGCCCGGACGAGGCTGGCACAGCTCACCTGCTGCACTCCCGGGCCGCCGAGCCCCTGGGCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 90 bp GCGTACGGGAGGAGATCACCAACAGCGCGCGCTCCTCGGCCGCAGTaGCGCCGCCGTCGCCACCGCCCGGCCAGCCGAAGCCCAGTCGTC +
Preference number: 5 (lower is better)
Translates to: AYGRRSPTARAPRPQ*RRRRHRPASRSPVV
Trigger: GACGACTGGGCTTCGGCTGGCCGGGCGGTGGCGACGGCGGCGGCACTGCGGCCGAGGAGCGCGCGCTGTTGGTGATCTCCTCCCGTACGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 90 bp ACCAGGCAGAACTTGCGGGAGGCTCGCGGCCAGCGGCGGTGGCTCTaGACCGCGTCCGTCACGTCGAACGCTTCCCAGCGCGCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: TRQNLREARGQRRWL*TASVTSNASQRAPP
Trigger: GGGCGGCGCGCGCTGGGAAGCGTTCGACGTGACGGACGCGGTGCAGAGCCACCGCCGCTGGCCGCGAGCCTCCCGCAAGTTCTGCCTGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 90 bp CACCGCCCGGCCAGCCGAAGCCCAGTCGTCTCAGGGCCAGCGGGCTaGTCTCCGAGGCCGTCACCGCGCGCAGCACCAGGCAGAACTTGC +
Preference number: 5 (lower is better)
Translates to: HRPASRSPVVSGPAG*SPRPSPRAAPGRTC
Trigger: GCAAGTTCTGCCTGGTGCTGCGCGCGGTGACGGCCTCGGAGAGCAGCCCGCTGGCCCTGAGACGACTGGGCTTCGGCTGGCCGGGCGGTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 90 bp CAGCCAGCGCAGTCCGCCGCCGCCTGCGACCGCCCAGGTTGGCTTTaGGTGACCCAGCGCCTGGTCCTGGATCCGGTGGCGGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: QPAQSAAACDRPGWL*VTQRLVLDPVAALQ
Trigger: CTGCAGAGCCGCCACCGGATCCAGGACCAGGCGCTGGGTCACGCAAAGCCAACCTGGGCGGTCGCAGGCGGCGGCGGACTGCGCTGGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CCA 90 bp CGCAGCACCAGGCAGAACTTGCGGGAGGCTCGCGGCCAGCGGCGGTaGCTCTGCACCGCGTCCGTCACGTCGAACGCTTCCCAGCGCGCG +
Preference number: 5 (lower is better)
Translates to: RSTRQNLREARGQRR*LCTASVTSNASQRA
Trigger: CGCGCGCTGGGAAGCGTTCGACGTGACGGACGCGGTGCAGAGCCACCGCCGCTGGCCGCGAGCCTCCCGCAAGTTCTGCCTGGTGCTGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CCA 90 bp CCCGGGAGTGCAGCAGGTGAGCTGTGCCAGCCTCGTCCGGGCACGTaGACAGCAGCAGCCGCGGAAGGAGGGTCGCACTGTCCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: PGSAAGELCQPRPGT*TAAAAEGGSHCPCL
Trigger: CAGACAGGGACAGTGCGACCCTCCTTCCGCGGCTGCTGCTGTCCACGTGCCCGGACGAGGCTGGCACAGCTCACCTGCTGCACTCCCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CCA 90 bp CGTGGACAGCAGCAGCCGCGGAAGGAGGGTCGCACTGTCCCTGTCTaGTTCCGGAGACCTCCGGCGCAGCACGCGCAGCTCCGCATTCAC +
Preference number: 5 (lower is better)
Translates to: RGQQQPRKEGRTVPV*FRRPPAQHAQLRIH
Trigger: GTGAATGCGGAGCTGCGCGTGCTGCGCCGGAGGTCTCCGGAACCAGACAGGGACAGTGCGACCCTCCTTCCGCGGCTGCTGCTGTCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CCA 90 bp GCACGCGCAGCTCCGCATTCACCACCTCATCGGCTTCGGAGAGGCTaGATACGTCGAACAGGAAGCTCTGGCCTGGCTCGGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: ARAAPHSPPHRLRRG*IRRTGSSGLARPPP
Trigger: CGGCGGCGGCCGAGCCAGGCCAGAGCTTCCTGTTCGACGTATCCAGCCTCTCCGAAGCCGATGAGGTGGTGAATGCGGAGCTGCGCGTGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037313.6
CDS CCA 90 bp CCTGGATCCGGTGGCGGCTCTGCAGCGGCCCGGAGAGCACGGGCCTaGGCTCGGATCTCCCGGAACAGACTCTCTTTCCTTTGCGTACGG +
Preference number: 5 (lower is better)
Translates to: PGSGGGSAAARRARA*ARISRNRLSFLCVR
Trigger: CCGTACGCAAAGGAAAGAGAGTCTGTTCCGGGAGATCCGAGCCCAGGCCCGTGCTCTCCGGGCCGCTGCAGAGCCGCCACCGGATCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 90 bp GCACGGGCCTGGGCTCGGATCTCCCGGAACAGACTCTCTTTCCTTTaGGTACGGGAGGAGATCACCAACAGCGCGCGCTCCTCGGCCGCA +
Preference number: 5 (lower is better)
Translates to: ARAWARISRNRLSFL*VREEITNSARSSAA
Trigger: TGCGGCCGAGGAGCGCGCGCTGTTGGTGATCTCCTCCCGTACGCAAAGGAAAGAGAGTCTGTTCCGGGAGATCCGAGCCCAGGCCCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CCA 90 bp ATCGGCTTCGGAGAGGCTGGATACGTCGAACAGGAAGCTCTGGCCTaGCTCGGCCGCCGCCGTTTCGTCTTGAGTTGCTTGGTCTGTGAA +
Preference number: 5 (lower is better)
Translates to: IGFGEAGYVEQEALA*LGRRRFVLSCLVCE
Trigger: TTCACAGACCAAGCAACTCAAGACGAAACGGCGGCGGCCGAGCCAGGCCAGAGCTTCCTGTTCGACGTATCCAGCCTCTCCGAAGCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037313.6
CDS CCA 90 bp GCACGCGCAGCTCCGCATTCACCACCTCATCGGCTTCGGAGAGGCTaGATACGTCGAACAGGAAGCTCTGGCCTTGAGTTGCTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: ARAAPHSPPHRLRRG*IRRTGSSGLELLGL
Trigger: CAGACCAAGCAACTCAAGGCCAGAGCTTCCTGTTCGACGTATCCAGCCTCTCCGAAGCCGATGAGGTGGTGAATGCGGAGCTGCGCGTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220073.2
CDS TCA 72 bp AGCTCGGGGACCCGGAACCGCAGCGGCCTGGAGAGCTaGAGGGCCTGGAGCCCGGGCGAGGGTCCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: SSGTRNRSGLES*RAWSPGEGPPA
Trigger: GGCGGGCGGACCCTCGCCCGGGCTCCAGGCCCTTCAGCTCTCCAGGCCGCTGCGGTTCCGGGTCCCCGAGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS TCA 72 bp CCGCCCAGGGGCTCGGCGGCCCGGGAGTGCAGCAGGTaGGCTGTGCCAGCCTCGTCCGGGCACGTGGACAGC +
Preference number: 6 (lower is better)
Translates to: PPRGSAARECSR*AVPASSGHVDS
Trigger: GCTGTCCACGTGCCCGGACGAGGCTGGCACAGCTCACCTGCTGCACTCCCGGGCCGCCGAGCCCCTGGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 72 bp GGGGCTCGGCGGCCCGGGAGTGCAGCAGGTGAGCTGTaGCAGCCTCGTCCGGGCACGTGGACAGCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: GARRPGSAAGEL*QPRPGTWTAAA
Trigger: GGCTGCTGCTGTCCACGTGCCCGGACGAGGCTGGCACAGCTCACCTGCTGCACTCCCGGGCCGCCGAGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 72 bp CCGAGGCCGTCACCGCGCGCAGCACCAGGCAGAACTTaGGGGAGGCTCGCGGCCAGCGGCGGTGGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: PRPSPRAAPGRT*GRLAASGGGSA
Trigger: TGCAGAGCCACCGCCGCTGGCCGCGAGCCTCCCGCAAGTTCTGCCTGGTGCTGCGCGCGGTGACGGCCTCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 72 bp GCCAGCCGAAGCCCAGTCGTCTCAGGGCCAGCGGGCTaGTCTCCGAGGCCGTCACCGCGCGCAGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: ASRSPVVSGPAG*SPRPSPRAAPG
Trigger: GCCTGGTGCTGCGCGCGGTGACGGCCTCGGAGAGCAGCCCGCTGGCCCTGAGACGACTGGGCTTCGGCTGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 72 bp CTCCCCGAGTCCCAGCCAGCGCAGTCCGCCGCCGCCTaGGACCGCCCAGGTTGGCTTTGCGTGACCCAGCGC +
Preference number: 6 (lower is better)
Translates to: LPESQPAQSAAA*DRPGWLCVTQR
Trigger: GCGCTGGGTCACGCAAAGCCAACCTGGGCGGTCGCAGGCGGCGGCGGACTGCGCTGGCTGGGACTCGGGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CAA 72 bp GCAGTCCGCCGCCGCCTGCGACCGCCCAGGTTGGCTTaGCGTGACCCAGCGCCTGGTCCTGGATCCGGTGGC +
Preference number: 6 (lower is better)
Translates to: AVRRRLRPPRLA*RDPAPGPGSGG
Trigger: GCCACCGGATCCAGGACCAGGCGCTGGGTCACGCAAAGCCAACCTGGGCGGTCGCAGGCGGCGGCGGACTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 72 bp AACTTGCGGGAGGCTCGCGGCCAGCGGCGGTGGCTCTaGACCGCGTCCGTCACGTCGAACGCTTCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: NLREARGQRRWL*TASVTSNASQR
Trigger: GCGCTGGGAAGCGTTCGACGTGACGGACGCGGTGCAGAGCCACCGCCGCTGGCCGCGAGCCTCCCGCAAGTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CCA 72 bp CAGCAGCCGCGGAAGGAGGGTCGCACTGTCCCTGTCTaGTTCCGGAGACCTCCGGCGCAGCACGCGCAGCTC +
Preference number: 6 (lower is better)
Translates to: QQPRKEGRTVPV*FRRPPAQHAQL
Trigger: GAGCTGCGCGTGCTGCGCCGGAGGTCTCCGGAACCAGACAGGGACAGTGCGACCCTCCTTCCGCGGCTGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CCA 72 bp AGGCAGAACTTGCGGGAGGCTCGCGGCCAGCGGCGGTaGCTCTGCACCGCGTCCGTCACGTCGAACGCTTCC +
Preference number: 6 (lower is better)
Translates to: RQNLREARGQRR*LCTASVTSNAS
Trigger: GGAAGCGTTCGACGTGACGGACGCGGTGCAGAGCCACCGCCGCTGGCCGCGAGCCTCCCGCAAGTTCTGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS GCA 72 bp TGGTCTGTGAAGCCGGTGATTGTGTCCACACGCCCGTaGCCTGAAGCTGCCGCGACCGGAGCCCTCCCCGCC +
Preference number: 6 (lower is better)
Translates to: WSVKPVIVSTRP*PEAAATGALPA
Trigger: GGCGGGGAGGGCTCCGGTCGCGGCAGCTTCAGGGCACGGGCGTGTGGACACAATCACCGGCTTCACAGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CCA 72 bp GCAGCAGGTGAGCTGTGCCAGCCTCGTCCGGGCACGTaGACAGCAGCAGCCGCGGAAGGAGGGTCGCACTGT +
Preference number: 6 (lower is better)
Translates to: AAGELCQPRPGT*TAAAAEGGSHC
Trigger: ACAGTGCGACCCTCCTTCCGCGGCTGCTGCTGTCCACGTGCCCGGACGAGGCTGGCACAGCTCACCTGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CCA 72 bp GGTGGCGGCTCTGCAGCGGCCCGGAGAGCACGGGCCTaGGCTCGGATCTCCCGGAACAGACTCTCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: GGGSAAARRARA*ARISRNRLSFL
Trigger: AAGGAAAGAGAGTCTGTTCCGGGAGATCCGAGCCCAGGCCCGTGCTCTCCGGGCCGCTGCAGAGCCGCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CAA 90 bp AGCACGGGCCTGGGCTCGGATCTCCCGGAACAGACTCTCTTTCCTTaGCGTACGGGAGGAGATCACCAACAGCGCGCGCTCCTCGGCCGC +
Preference number: 6 (lower is better)
Translates to: STGLGSDLPEQTLFP*RTGGDHQQRALLGR
Trigger: GCGGCCGAGGAGCGCGCGCTGTTGGTGATCTCCTCCCGTACGCAAAGGAAAGAGAGTCTGTTCCGGGAGATCCGAGCCCAGGCCCGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CAA 72 bp GCCTGGCTCGGCCGCCGCCGTTTCGTCTTGAGTTGCTaGGTCTGTGAAGCCGGTGATTGTGTCCACACGCCC +
Preference number: 6 (lower is better)
Translates to: AWLGRRRFVLSC*VCEAGDCVHTP
Trigger: GGGCGTGTGGACACAATCACCGGCTTCACAGACCAAGCAACTCAAGACGAAACGGCGGCGGCCGAGCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037313.6
CDS GCA 72 bp CTGGCCTGGCTCGGCCGCCGCCGTTTCGTCTTGAGTTaGTTGGTCTGTGAAGCCGGTGATTGTGTCCACACG +
Preference number: 6 (lower is better)
Translates to: LAWLGRRRFVLS*LVCEAGDCVHT
Trigger: CGTGTGGACACAATCACCGGCTTCACAGACCAAGCAACTCAAGACGAAACGGCGGCGGCCGAGCCAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037313.6
CDS CCA 72 bp GGAGAGGCTGGATACGTCGAACAGGAAGCTCTGGCCTaGCTCGGCCGCCGCCGTTTCGTCTTGAGTTGCTTG +
Preference number: 6 (lower is better)
Translates to: GEAGYVEQEALA*LGRRRFVLSCL
Trigger: CAAGCAACTCAAGACGAAACGGCGGCGGCCGAGCCAGGCCAGAGCTTCCTGTTCGACGTATCCAGCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037313.6
CDS CCA 72 bp GCTCCGCATTCACCACCTCATCGGCTTCGGAGAGGCTaGATACGTCGAACAGGAAGCTCTGGCCTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: APHSPPHRLRRG*IRRTGSSGLAR
Trigger: CCGAGCCAGGCCAGAGCTTCCTGTTCGACGTATCCAGCCTCTCCGAAGCCGATGAGGTGGTGAATGCGGAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037313.6
CDS TCA 72 bp AAGCTCTGGCCTGGCTCGGCCGCCGCCGTTTCGTCTTaGGTTGCTTGGTCTGTGAAGCCGGTGATTGTGTCC +
Preference number: 6 (lower is better)
Translates to: KLWPGSAAAVSS*VAWSVKPVIVS
Trigger: GGACACAATCACCGGCTTCACAGACCAAGCAACTCAAGACGAAACGGCGGCGGCCGAGCCAGGCCAGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037313.6
CDS CAA 72 bp GAAGCTCTGGCCTGGCTCGGCCGCCGCCGTTTCGTCTaGAGTTGCTTGGTCTGTGAAGCCGGTGATTGTGTC +
Preference number: 6 (lower is better)
Translates to: EALAWLGRRRFV*SCLVCEAGDCV
Trigger: GACACAATCACCGGCTTCACAGACCAAGCAACTCAAGACGAAACGGCGGCGGCCGAGCCAGGCCAGAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037313.6
CDS CAA 72 bp CTGGGCTCGGATCTCCCGGAACAGACTCTCTTTCCTTaGCGTACGGGAGGAGATCACCAACAGCGCGCGCTC +
Preference number: 6 (lower is better)
Translates to: LGSDLPEQTLFP*RTGGDHQQRAL
Trigger: GAGCGCGCGCTGTTGGTGATCTCCTCCCGTACGCAAAGGAAAGAGAGTCTGTTCCGGGAGATCCGAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037313.6
ENSMUST00000220073.2
CDS CCA 72 bp GCTCCGCATTCACCACCTCATCGGCTTCGGAGAGGCTaGATACGTCGAACAGGAAGCTCTGGCCTTGAGTTG +
Preference number: 6 (lower is better)
Translates to: APHSPPHRLRRG*IRRTGSSGLEL
Trigger: CAACTCAAGGCCAGAGCTTCCTGTTCGACGTATCCAGCCTCTCCGAAGCCGATGAGGTGGTGAATGCGGAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220073.2