Pregenerated sensors for GDF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051279Ensembl transcript IDs: ENSMUST00000057613.3
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTGGGGGTTGGAAGGTTCTGGGAAGGCTGGGCTGCTTCTTACTGTaGTCCTACTTTCAGGCTGTCCCCCACCTGTGGCCTCTTCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: VGGWKVLGRLGCFLL*SYFQAVPHLWPLPS Trigger: GCTTGGAAGAGGCCACAGGTGGGGGACAGCCTGAAAGTAGGAGCACAGTAAGAAGCAGCCCAGCCTTCCCAGAACCTTCCAACCCCCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 90 bp | CCCTTAGCTGCTTCTGGGTTGGGGGTTGGAAGGTTCTGGGAAGGCTaGGCTGCTTCTTACTGTGCTCCTACTTTCAGGCTGTCCCCCACC | + |
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Preference number: 1 (lower is better) Translates to: PLAASGLGVGRFWEG*AASYCAPTFRLSPT Trigger: GGTGGGGGACAGCCTGAAAGTAGGAGCACAGTAAGAAGCAGCCCAGCCTTCCCAGAACCTTCCAACCCCCAACCCAGAAGCAGCTAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 90 bp | TGGAGGTCTGAGCCCACAGCGGTGGCAACTCCCTGTTCCCTCCGCTaGGAGAGACCAGGACAGACTGATAAATTCGTGGGGATGCACAGA | + |
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Preference number: 1 (lower is better) Translates to: WRSEPTAVATPCSLR*ERPGQTDKFVGMHR Trigger: TCTGTGCATCCCCACGAATTTATCAGTCTGTCCTGGTCTCTCCCAGCGGAGGGAACAGGGAGTTGCCACCGCTGTGGGCTCAGACCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 90 bp | CTTCAGAGGCAGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTaGGGCCTGGCCCTTTATCTCCATCCTCTTGTGGGGCCCGCATCT | + |
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Preference number: 1 (lower is better) Translates to: LQRQRLLALSSSFHA*GLALYLHPLVGPAS Trigger: AGATGCGGGCCCCACAAGAGGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCTGCCTCTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 90 bp | AGAAACATCCATGACCAAGAGCTTTTGGGTGGGCTACCCCAGCCTTaGGTAATGCGCCTCTGTGTCACCCGGTCAGAGGTAGGCCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: RNIHDQELLGGLPQP*VMRLCVTRSEVGLV Trigger: CACAAGGCCTACCTCTGACCGGGTGACACAGAGGCGCATTACCCAAGGCTGGGGTAGCCCACCCAAAAGCTCTTGGTCATGGATGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR TCA 90 bp | ACCAGTATTAGCATTCCGACCGTTTCCTTGACAGTTTGTCTTCTCTaGACCAGACAAGAAACAGATTTCAGCGGGGAGAGAGAGCAAACC | + |
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Preference number: 1 (lower is better) Translates to: TSISIPTVSLTVCLL*TRQETDFSGEREQT Trigger: GGTTTGCTCTCTCTCCCCGCTGAAATCTGTTTCTTGTCTGGTTCAGAGAAGACAAACTGTCAAGGAAACGGTCGGAATGCTAATACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR GCA 90 bp | GTCATCTTAAATAAACAAATATATACAGCCTCAACAGAACAGCAGTaGATCCAAAGCAAATGTGCATTTAAGTTATTTCTCCTGGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: VILNKQIYTASTEQQ*IQSKCAFKLFLLAK Trigger: CTTGGCCAGGAGAAATAACTTAAATGCACATTTGCTTTGGATGCACTGCTGTTCTGTTGAGGCTGTATATATTTGTTTATTTAAGATGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGAGGCAGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCTGTCCCCCACCTGTaGCCTCTTCCAAGCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LQRQRLLALSSSFHAWGLAVPHL*PLPSQL Trigger: GAGCTGGCTTGGAAGAGGCCACAGGTGGGGGACAGC...CAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCTGCCTCTGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CAA 90 bp | ACTTCAGAGGCAGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTaGGGGCCTGGCCCTTTATCTCCATCCTCTTGTGGGGCCCGCATC | + |
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Preference number: 2 (lower is better) Translates to: TSEAETPGPFILLPC*GPGPLSPSSCGARI Trigger: GATGCGGGCCCCACAAGAGGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCTGCCTCTGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGCCTTGGGTAATGCGCCTCTGTGTCACCCGGTCAGAGGTAGGCCTTGTGACCCTTAGCTGCTTCTaGGTTGGGGGTTGGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: PQPWVMRLCVTRSEVGLVTLSCF*VGGWKV Trigger: AACCTTCCAACCCCCAACCCAGAAGCAGCTAAGGGT...CACAAGGCCTACCTCTGACCGGGTGACACAGAGGCGCATTACCCAAGGCTGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTGGGTGGGCTACCCCAGCCTTGGGTAATGCGCCTCTGTGTCACCCGGTCAACAGAAAAGGCATCTaGAGGTCTGAGCCCACAGCG | + |
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Preference number: 2 (lower is better) Translates to: AFGWATPALGNAPLCHPVNRKGI*RSEPTA Trigger: CGCTGTGGGCTCAGACCTCCAGATGCCTTTTCTGTT...GACCGGGTGACACAGAGGCGCATTACCCAAGGCTGGGGTAGCCCACCCAAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGAGGCAGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGACGCCAGCTGAGACTTaGCTAGAAAGACCCAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LQRQRLLALSSSFHAWGLTPAET*LERPKG Trigger: GCCTTTGGGTCTTTCTAGCCAAGTCTCAGCTGGCGT...CAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCTGCCTCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR GCA 90 bp | CCAAGAGCTTTTGGGTGGGCTACCCCAGCCTTGGGTAATGCGCCTCTGTGTCACGGCTGCTTCTTACTGTaGTCCTACTTTCAGGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: PRAFGWATPALGNAPLCHGCFLL*SYFQAV Trigger: GACAGCCTGAAAGTAGGAGCACAGTAAGAAGCAGCC...GTGACACAGAGGCGCATTACCCAAGGCTGGGGTAGCCCACCCAAAAGCTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGAGGCAGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGATAAATTCGTGGGGATaGACAGAGCAGAGAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LQRQRLLALSSSFHAWGLINSWG*TEQRRR Trigger: CCTCCTTCTCTGCTCTGTGCATCCCCACGAATTTAT...CAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCTGCCTCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCGAGAAGGAGGCAGCTTaGGCTTCTCTAAGGGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: RDSWPFHPPSMLGAWPFIEKEAA*ASLRVR Trigger: TCTTACCCTTAGAGAAGCCCAAGCTGCCTCCTTCTC...GATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCTCCATCCTGCCTTAGAAGGAGATaGTGGGATTTTGGCAAATTC | + |
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Preference number: 2 (lower is better) Translates to: PGPFILLPCLGPGPLSPSCLRRR*WDFGKF Trigger: GAATTTGCCAAAATCCCAGCATCTCCTTCTAAGGCA...GGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CAA 90 bp | TTCTGTTTAAAGAAGCCACTGAGAAACATCCATGACCAAGAGCTTTaGGGTGGGCTACCCCAGCCTTGGGTAATGCGCCTCTGTGTCACC | + |
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Preference number: 2 (lower is better) Translates to: FCLKKPLRNIHDQEL*GGLPQPWVMRLCVT Trigger: GGTGACACAGAGGCGCATTACCCAAGGCTGGGGTAGCCCACCCAAAAGCTCTTGGTCATGGATGTTTCTCAGTGGCTTCTTTAAACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CAA 90 bp | AACCAGACAAGAAACAGATTTCAGCGGGGAGAGAGAGCAAACCAGTaGGGGGAACCCAGATCAGTCTGTAATCACTCACTCAGGGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: NQTRNRFQRGERANQ*GEPRSVCNHSLRVL Trigger: GAGGACCCTGAGTGAGTGATTACAGACTGATCTGGGTTCCCCCAACTGGTTTGCTCTCTCTCCCCGCTGAAATCTGTTTCTTGTCTGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CCA 90 bp | TCCGACCGTTTCCTTGACAGTTTGTCTTCTCTGAACCAGACAAGAAACAGATTTTCCTCCTTCCATGCTTaGGGCCTGGCCCTTTATCTC | + |
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Preference number: 2 (lower is better) Translates to: SDRFLDSLSSLNQTRNRFSSFHA*GLALYL Trigger: GAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGA...AAATCTGTTTCTTGTCTGGTTCAGAGAAGACAAACTGTCAAGGAAACGGTCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CCA 90 bp | AATGTTTCTCTAGGGGGAGCCCTGGGCTATTGCTGGCTGGTAATCTCTCAGGAAACTCACTTATTCCTTTaGTCAAATACTTCCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: NVSLGGALGYCWLVISQETHLFL*SNTSCE Trigger: CTCACAGGAAGTATTTGACCAAAGGAATAAGTGAGT...TTCCTGAGAGATTACCAGCCAGCAATAGCCCAGGGCTCCCCCTAGAGAAACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CAA 90 bp | TGTTTGAAAATAATCATGGTACAGACTGTGGGAAAGGATGGAGATTaGGAGTACTACAGGTATTTCCCGTGTTCTGTCTCTTACTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: CLKIIMVQTVGKDGD*EYYRYFPCSVSYFL Trigger: AAGGAAGTAAGAGACAGAACACGGGAAATACCTGTAGTACTCCAAATCTCCATCCTTTCCCACAGTCTGTACCATGATTATTTTCAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR GCA 72 bp | CTGTCCCCCACCTGTGGCCTCTTCCAAGCCAGCTCCTaGTCCTTTCTCGGCAGTCAGGCCTCCCTCCATGGT | + |
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Preference number: 3 (lower is better) Translates to: LSPTCGLFQASS*SFLGSQASLHG Trigger: ACCATGGAGGGAGGCCTGACTGCCGAGAAAGGAGCAGGAGCTGGCTTGGAAGAGGCCACAGGTGGGGGACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 72 bp | GAGCCCACAGCGGTGGCAACTCCCTGTTCCCTCCGCTaGGAGAGACCAGGACAGACTGATAAATTCGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: EPTAVATPCSLR*ERPGQTDKFVG Trigger: CCCCACGAATTTATCAGTCTGTCCTGGTCTCTCCCAGCGGAGGGAACAGGGAGTTGCCACCGCTGTGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 72 bp | ACAGAAAAGGCATCTGGAGGTCTGAGCCCACAGCGGTaGCAACTCCCTGTTCCCTCCGCTGGGAGAGACCAG | + |
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Preference number: 3 (lower is better) Translates to: TEKASGGLSPQR*QLPVPSAGRDQ Trigger: CTGGTCTCTCCCAGCGGAGGGAACAGGGAGTTGCCACCGCTGTGGGCTCAGACCTCCAGATGCCTTTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 72 bp | TCCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTaGCCCTTTATCTCCATCCTCTTGTGGGGCCCGCAT | + |
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Preference number: 3 (lower is better) Translates to: SWPFHPPSMLGA*PFISILLWGPH Trigger: ATGCGGGCCCCACAAGAGGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CAA 90 bp | AGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCTGGGCTACCCCAGCCTaGGGTAATGCGCCTCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: RDSWPFHPPSMLGAWPFIWATPA*GNAPLC Trigger: ACACAGAGGCGCATTACCCAAGGCTGGGGTAGCCCA...GATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR GCA 72 bp | TGGAAGGTTCTGGGAAGGCTGGGCTGCTTCTTACTGTaGTCCTACTTTCAGGCTGTCCCCCACCTGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: WKVLGRLGCFLL*SYFQAVPHLWP Trigger: AGGCCACAGGTGGGGGACAGCCTGAAAGTAGGAGCACAGTAAGAAGCAGCCCAGCCTTCCCAGAACCTTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR GCA 72 bp | TGGGTTGGGGGTTGGAAGGTTCTGGGAAGGCTGGGCTaGTTCTTACTGTGCTCCTACTTTCAGGCTGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: WVGGWKVLGRLG*FLLCSYFQAVP Trigger: GGGGACAGCCTGAAAGTAGGAGCACAGTAAGAAGCAGCCCAGCCTTCCCAGAACCTTCCAACCCCCAACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 72 bp | CATGACCAAGAGCTTTTGGGTGGGCTACCCCAGCCTTaGGTAATGCGCCTCTGTGTCACCCGGTCAGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: HDQELLGGLPQP*VMRLCVTRSEV Trigger: TACCTCTGACCGGGTGACACAGAGGCGCATTACCCAAGGCTGGGGTAGCCCACCCAAAAGCTCTTGGTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 72 bp | CAGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTaGGGCCTGGCCCTTTATCTCCATCCTCTTGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: QRLLALSSSFHA*GLALYLHPLVG Trigger: CCCCACAAGAGGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR GCA 72 bp | GAGGCAGAGACTCCTGGCCCTTTCATCCTCCTTCCATaGTTGGGGCCTGGCCCTTTATCTCCATCCTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: EAETPGPFILLP*LGPGPLSPSSC Trigger: ACAAGAGGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 72 bp | GCTTCTGGGTTGGGGGTTGGAAGGTTCTGGGAAGGCTaGGCTGCTTCTTACTGTGCTCCTACTTTCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ASGLGVGRFWEG*AASYCAPTFRL Trigger: CAGCCTGAAAGTAGGAGCACAGTAAGAAGCAGCCCAGCCTTCCCAGAACCTTCCAACCCCCAACCCAGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR GCA 72 bp | TTCCAGGCTGGCAAGGCAAAGTGTGAAACCCTTAGCTaGTTCTGGGTTGGGGGTTGGAAGGTTCTGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: FQAGKAKCETLS*FWVGGWKVLGR Trigger: CCTTCCCAGAACCTTCCAACCCCCAACCCAGAAGCAGCTAAGGGTTTCACACTTTGCCTTGCCAGCCTGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CAA 90 bp | CCAAAGGCCTCACTTTCTTACACAGGTAGAAACAACCAATCTGAGATGCGGACATTAGCTGCTTCTGGGTaGGGGGTTGGAAGGTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: PKASLSYTGRNNQSEMRTLAASG*GVGRFW Trigger: CCAGAACCTTCCAACCCCCAACCCAGAAGCAGCTAA...TGTCCGCATCTCAGATTGGTTGTTTCTACCTGTGTAAGAAAGTGAGGCCTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR TCA 72 bp | TGGTCAAATACTTCCTGTGAGGTCAAGGACGCCAGCTaGGACTTGGCTAGAAAGACCCAAAGGCCTCACTTT | + |
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Preference number: 3 (lower is better) Translates to: WSNTSCEVKDAS*DLARKTQRPHF Trigger: AAAGTGAGGCCTTTGGGTCTTTCTAGCCAAGTCTCAGCTGGCGTCCTTGACCTCACAGGAAGTATTTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CAA 90 bp | AGCCATAATAAAAGAAAGAATCCTTCTTGTCTAGTCTTTCCAGGCTGGCAAGGCCTTCTGGGTTGGGGGTaGGAAGGTTCTGGGAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SHNKRKNPSCLVFPGWQGLLGWG*EGSGKA Trigger: AGCCTTCCCAGAACCTTCCAACCCCCAACCCAGAAG...GCCTTGCCAGCCTGGAAAGACTAGACAAGAAGGATTCTTTCTTTTATTATGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 72 bp | CTAAGGGTAAGACCCTTCCTGACTCACTTATTCCTTTaGTCAAATACTTCCTGTGAGGTCAAGGACGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: LRVRPFLTHLFL*SNTSCEVKDAS Trigger: GCTGGCGTCCTTGACCTCACAGGAAGTATTTGACCAAAGGAATAAGTGAGTCAGGAAGGGTCTTACCCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR TCA 72 bp | CAAATTCTGTTTAAAGAAGCCACTGAGAAACATCCATaGCCAAGAGCTTTTGGGTGGGCTACCCCAGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: QILFKEATEKHP*PRAFGWATPAL Trigger: CAAGGCTGGGGTAGCCCACCCAAAAGCTCTTGGTCATGGATGTTTCTCAGTGGCTTCTTTAAACAGAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR TCA 72 bp | AGCATTCCGACCGTTTCCTTGACAGTTTGTCTTCTCTaGACCAGACAAGAAACAGATTTCAGCGGGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SIPTVSLTVCLL*TRQETDFSGER Trigger: TCTCTCCCCGCTGAAATCTGTTTCTTGTCTGGTTCAGAGAAGACAAACTGTCAAGGAAACGGTCGGAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR-3UTR CAA 90 bp | TCCGACCGTTTCCTTGACAGTTTGTCTTCTCTGAACCAGACAAGAAACAGATTTAAGAAAGAATCCTTCTaGTCTAGTCTTTCCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SDRFLDSLSSLNQTRNRFKKESF*SSLSRL Trigger: CAGCCTGGAAAGACTAGACAAGAAGGATTCTTTCTT...AAATCTGTTTCTTGTCTGGTTCAGAGAAGACAAACTGTCAAGGAAACGGTCGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CCA 72 bp | TTTGAAAATAATCATGGTACAGACTGTGGGAAAGGATaGAGATTTGGAGTACTACAGGTATTTCCCGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: FENNHGTDCGKG*RFGVLQVFPVF Trigger: GAACACGGGAAATACCTGTAGTACTCCAAATCTCCATCCTTTCCCACAGTCTGTACCATGATTATTTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR TCA 72 bp | TTTATATTACCAGTATTAGCATTCCGACCGTTTCCTTaGCAGTTTGTCTTCTCTGAACCAGACAAGAAACAG | + |
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Preference number: 3 (lower is better) Translates to: FILPVLAFRPFP*QFVFSEPDKKQ Trigger: CTGTTTCTTGTCTGGTTCAGAGAAGACAAACTGTCAAGGAAACGGTCGGAATGCTAATACTGGTAATATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR TCA 90 bp | CCAAGAGCTTTTGGGTGGGCTACCCCAGCCTTGGGTAATGCGCCTCTGTGTCACGCCTGGGTTGGTCCCTaGGGATCCAGGGTCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PRAFGWATPALGNAPLCHAWVGP*GSRVLA Trigger: CGCCAGGACCCTGGATCCTCAGGGACCAACCCAGGC...GTGACACAGAGGCGCATTACCCAAGGCTGGGGTAGCCCACCCAAAAGCTCTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR TCA 90 bp | CCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCTCCATCCAGCTGCTTCCAAGGCTaGGGGCGCAGGCCCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGPFILLPCLGPGPLSPSSCFQG*GRRPCH Trigger: GTGGCAGGGCCTGCGCCCTCAGCCTTGGAAGCAGCT...GGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR TCA 90 bp | AGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCCCATGTCGCTTGCCGTaGCGGCTGGCGAAGGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: RDSWPFHPPSMLGAWPFIPCRLP*RLAKAV Trigger: CACCGCCTTCGCCAGCCGTCACGGCAAGCGACATGG...GATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | CTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCTCCATCCTCAGCTCACCCCAGGCTaGCCGCAACTCCAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: LALSSSFHAWGLALYLHPQLTPG*PQLQAQ Trigger: CTGTGCCTGGAGTTGCGGGCAGCCTGGGGTGAGCTG...AGGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | CCCCAGCCTTGGGTAATGCGCCTCTGTGTCACCCGGTCAGAGGTAGGCCTTGTGGAGGAGATGGAAGCCTaGTGGAAACCCGGCAAATCC | + |
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Preference number: 4 (lower is better) Translates to: PQPWVMRLCVTRSEVGLVEEMEA*WKPGKS Trigger: GGATTTGCCGGGTTTCCAGCAGGCTTCCATCTCCTC...CACAAGGCCTACCTCTGACCGGGTGACACAGAGGCGCATTACCCAAGGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | CCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCTCCATCCCTCCGGAGAGGAGTGTaGGAGAGATCGTCCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PGPFILLPCLGPGPLSPSLRRGV*ERSSSP Trigger: AGGACTGGACGATCTCTCGCACACTCCTCTCCGGAG...GGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | CCAAGAGCTTTTGGGTGGGCTACCCCAGCCTTGGGTAATGCGCCTCTGTGTCACAAACAAGGGAAGAGCTaGAAGTGCAGCGGTCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRAFGWATPALGNAPLCHKQGKS*KCSGRA Trigger: GGCCCGACCGCTGCACTTGCAGCTCTTCCCTTGTTT...GTGACACAGAGGCGCATTACCCAAGGCTGGGGTAGCCCACCCAAAAGCTCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | AAATGTTTCTCTAGGGGGAGCCCTGGGCTATTGCTGGCTGGTAATCTCTCAGGAGGGAAGAGCTGCAAGTaGAGCGGTCGGGCCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KCFSRGSPGLLLAGNLSGGKSCK*SGRAGS Trigger: GCTACCGGCCCGACCGCTGCACTTGCAGCTCTTCCC...TCCTGAGAGATTACCAGCCAGCAATAGCCCAGGGCTCCCCCTAGAGAAACATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | CTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCTCCATCCTGCAGCCTGGACTTCTTaGCATGTCGCTTGCCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LALSSSFHAWGLALYLHPAAWTS*HVACRD Trigger: GTCACGGCAAGCGACATGGCAAGAAGTCCAGGCTGC...AGGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR TCA 90 bp | AGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCGCTCATGCATCTCAGTaGACAGGTTCTTGCGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RDSWPFHPPSMLGAWPFIAHASQ*TGSCAA Trigger: CGCAGCGCAAGAACCTGTTCACTGAGATGCATGAGC...GATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR TCA 90 bp | TCCGACCGTTTCCTTGACAGTTTGTCTTCTCTGAACCAGACAAGAAACAGATTTCGACGGCGCTGGCCATaGCCCCTCGGCTCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDRFLDSLSSLNQTRNRFRRRWP*PLGSRS Trigger: GCTGCGGGAGCCGAGGGGTCATGGCCAGCGCCGTCG...AAATCTGTTTCTTGTCTGGTTCAGAGAAGACAAACTGTCAAGGAAACGGTCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | CCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCTCCATCCTCTTGTGGAGTTCGCTaGATCTTCCCTTCTTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGPFILLPCLGPGPLSPSSCGVR*IFPSLR Trigger: CCGCAAAGAAGGGAAGATGCAGCGAACTCCACAAGA...GGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | AATGTTTCTCTAGGGGGAGCCCTGGGCTATTGCTGGCTGGTAATCTCTCAGGAATTAGTGGGCTCAAGGTaGGAGCGCAGCGGAAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: NVSLGGALGYCWLVISQELVGSR*ERSGKS Trigger: CGACTTTCCGCTGCGCTCGCACCTTGAGCCCACTAA...TTCCTGAGAGATTACCAGCCAGCAATAGCCCAGGGCTCCCCCTAGAGAAACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CCA 90 bp | AATGTTTCTCTAGGGGGAGCCCTGGGCTATTGCTGGCTGGTAATCTCTCAGGAATGGAGTCCAATTCGGTaGAGGAGGAGGAGGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVSLGGALGYCWLVISQEWSPIR*RRRRTR Trigger: CCTCGTCCTCCTCCTCCTCCACCGAATTGGACTCCA...TTCCTGAGAGATTACCAGCCAGCAATAGCCCAGGGCTCCCCCTAGAGAAACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR TCA 90 bp | CCAAGAGCTTTTGGGTGGGCTACCCCAGCCTTGGGTAATGCGCCTCTGTGTCACCAGCTCTTCTTTGTCTaGGAGTGTGGACACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRAFGWATPALGNAPLCHQLFFV*ECGHIK Trigger: TTTGATGTGTCCACACTCTCAGACAAAGAAGAGCTG...GTGACACAGAGGCGCATTACCCAAGGCTGGGGTAGCCCACCCAAAAGCTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGGCAGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCTGACTTGGAAGACTaGAAAAAGCTGGCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LQRQRLLALSSSFHAWGLADLED*KKLALM Trigger: CATCAATGCCAGCTTTTTCCAGTCTTCCAAGTCAGC...CAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCTGCCTCTGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CCA 90 bp | TTCTGTTTAAAGAAGCCACTGAGAAACATCCATGACCAAGAGCTTTTGGGTGGGCCAGCCGGCCTGGGTTaGTCCCTGAGGATCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FCLKKPLRNIHDQELLGGPAGLG*SLRIQG Trigger: ACCCTGGATCCTCAGGGACCAACCCAGGCCGGCTGG...CCCACCCAAAAGCTCTTGGTCATGGATGTTTCTCAGTGGCTTCTTTAAACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCTCCATCCTGTAAGTCTTGTAGATTaGCAGCATGTACTCGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LALSSSFHAWGLALYLHPVSLVD*QHVLVR Trigger: CCTCACGAGTACATGCTGTCAATCTACAAGACTTAC...AGGATGGAGATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR TCA 90 bp | TTCTCTAAGGGTAAGACCCTTCCTGACTCACTTATTCCTTTGGTCAAATACTTCGACAGCATGTACTCGTaGGGCACCACGCGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSKGKTLPDSLIPLVKYFDSMYS*GTTRSP Trigger: GGGGCTGCGCGTGGTGCCTCACGAGTACATGCTGTC...GAAGTATTTGACCAAAGGAATAAGTGAGTCAGGAAGGGTCTTACCCTTAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | GGCCTTGTGGTTTCTCATTATCCTTCACGGGGTTCCACACGGACTAATTCTTGTGCATCTTCCCTTCTTTaGGGTTCCCCACGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVSHYPSRGSTRTNSCASSLL*GSPRLW Trigger: CCAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGC...ACAAGAATTAGTCCGTGTGGAACCCCGTGAAGGATAATGAGAAACCACAAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CCA 90 bp | CCAAAGGCCTCACTTTCTTACACAGGTAGAAACAACCAATCTGAGATGCGGACAGAGATGGAAGCCTGCTaGAAACCCGGCAAATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKASLSYTGRNNQSEMRTEMEAC*KPGKSQ Trigger: CTGGGATTTGCCGGGTTTCCAGCAGGCTTCCATCTC...TGTCCGCATCTCAGATTGGTTGTTTCTACCTGTGTAAGAAAGTGAGGCCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGCCTCACTTTCTTACACAGGTAGAAACAACCAATCTGAGATGCGGACATCTGCAGAGCCCAGCTaGTCATGCATCTCAGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKASLSYTGRNNQSEMRTSAEPS*SCISVN Trigger: GTTCACTGAGATGCATGAGCAGCTGGGCTCTGCAGA...TGTCCGCATCTCAGATTGGTTGTTTCTACCTGTGTAAGAAAGTGAGGCCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | TTCTCTAAGGGTAAGACCCTTCCTGACTCACTTATTCCTTTGGTCAAATACTTCGCAGAGGCTTTCTGCTaGAGCGCAGCCTGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKGKTLPDSLIPLVKYFAEAFC*SAAWTS Trigger: AGAAGTCCAGGCTGCGCTGCAGCAGAAAGCCTCTGC...GAAGTATTTGACCAAAGGAATAAGTGAGTCAGGAAGGGTCTTACCCTTAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CCA 90 bp | TTCTCTAAGGGTAAGACCCTTCCTGACTCACTTATTCCTTTGGTCAAATACTTCTGCTGCAGCGCAGCCTaGACTTCTTGCCATGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKGKTLPDSLIPLVKYFCCSAA*TSCHVA Trigger: AGCGACATGGCAAGAAGTCCAGGCTGCGCTGCAGCA...GAAGTATTTGACCAAAGGAATAAGTGAGTCAGGAAGGGTCTTACCCTTAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR TCA 90 bp | CGGACAAAAGTAATAGGTTATTTCTCTTATTCCCTCCTCCCCCAATCCACAGAAGGAAAAAGCTGGCATTaGTGCCCAGCTTCTCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTKVIGYFSYSLLPQSTEGKSWH*CPASRQ Trigger: TTGCCGAGAAGCTGGGCATCAATGCCAGCTTTTTCC...TTCTGTGGATTGGGGGAGGAGGGAATAAGAGAAATAACCTATTACTTTTGTCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | TTCCTGACTCACTTATTCCTTTGGTCAAATACTTCCTGTGAGGTCAAGGACGCCAACAGGTTCTTGCGCTaGGATCTGGTGAACACTACA | + |
|
Preference number: 4 (lower is better) Translates to: FLTHLFLWSNTSCEVKDANRFLR*DLVNTT Trigger: TGTAGTGTTCACCAGATCGCAGCGCAAGAACCTGTT...GGCGTCCTTGACCTCACAGGAAGTATTTGACCAAAGGAATAAGTGAGTCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR GCA 90 bp | TTGGCTAGAAAGACCCAAAGGCCTCACTTTCTTACACAGGTAGAAACAACCAATGAGCCCAGCTGCTCATaGATCTCAGTGAACAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LARKTQRPHFLTQVETTNEPSCS*ISVNRF Trigger: GAACCTGTTCACTGAGATGCATGAGCAGCTGGGCTC...ATTGGTTGTTTCTACCTGTGTAAGAAAGTGAGGCCTTTGGGTCTTTCTAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CAA 72 bp | GATCTAAAATGTTTCTCTAGGGGGAGCCCTGGGCTATaGCTGGCTGGTAATCTCTCAGGAATGTCAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DLKCFSRGSPGL*LAGNLSGMSER Trigger: TCTTTCTGACATTCCTGAGAGATTACCAGCCAGCAATAGCCCAGGGCTCCCCCTAGAGAAACATTTTAGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR TCA 90 bp | TTCCTGACTCACTTATTCCTTTGGTCAAATACTTCCTGTGAGGTCAAGGACGCCAGTGATCGTATTAGCTaGCTTGGAAGACTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLTHLFLWSNTSCEVKDASDRIS*LGRLEK Trigger: TTTTTCCAGTCTTCCAAGTCAGCTAATACGATCACT...GGCGTCCTTGACCTCACAGGAAGTATTTGACCAAAGGAATAAGTGAGTCAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CAA 72 bp | ATAATCATGGTACAGACTGTGGGAAAGGATGGAGATTaGGAGTACTACAGGTATTTCCCGTGTTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIMVQTVGKDGD*EYYRYFPCSVS Trigger: AGAGACAGAACACGGGAAATACCTGTAGTACTCCAAATCTCCATCCTTTCCCACAGTCTGTACCATGATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CCA 90 bp | CGGACAAAAGTAATAGGTTATTTCTCTTATTCCCTCCTCCCCCAATCCACAGAACTTTGTCTGAGAGTGTaGACACATCAAACAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: RTKVIGYFSYSLLPQSTELCLRV*THQTNT Trigger: AGTATTTGTTTGATGTGTCCACACTCTCAGACAAAG...TTCTGTGGATTGGGGGAGGAGGGAATAAGAGAAATAACCTATTACTTTTGTCCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CAA 72 bp | AGCTTACTTCTCAAAGAGACTCTGTCTAGGCGATGTTaGAAAATAATCATGGTACAGACTGTGGGAAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLLKETLSRRC*KIIMVQTVGKD Trigger: ATCCTTTCCCACAGTCTGTACCATGATTATTTTCAAACATCGCCTAGACAGAGTCTCTTTGAGAAGTAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| 3UTR CAA 72 bp | TCCTTATCGTCCAAGAAGGTATACTGTAAAAATGTTTaGTATATCAATCGACCTCCAGTAACTTTAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSKKVYCKNV*YINRPPVTLVL Trigger: CAACACTAAAGTTACTGGAGGTCGATTGATATACAAAACATTTTTACAGTATACCTTCTTGGACGATAAGGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 90 bp | TGGACTTCTTGCCATGTCGCTTGCCGTGACGGCTGGCGAAGGCGGTaGGTCGCCGCCGGCGGCCGGGCGAGGGCAGCCAAGACCCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: WTSCHVACRDGWRRR*VAAGGRARAAKTRR Trigger: ACGCCGGGTCTTGGCTGCCCTCGCCCGGCCGCCGGCGGCGACGCACCGCCTTCGCCAGCCGTCACGGCAAGCGACATGGCAAGAAGTCCA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS TCA 90 bp | TTTCTGCTGCAGCGCAGCCTGGACTTCTTGCCATGTCGCTTGCCGTaGCGGCTGGCGAAGGCGGTGCGTCGCCGCCGGCGGCCGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLLQRSLDFLPCRLP*RLAKAVRRRRRPGE Trigger: CTCGCCCGGCCGCCGGCGGCGACGCACCGCCTTCGCCAGCCGTCACGGCAAGCGACATGGCAAGAAGTCCAGGCTGCGCTGCAGCAGAAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 90 bp | GAGGCTTTCTGCTGCAGCGCAGCCTGGACTTCTTGCCATGTCGCTTaGCGTGACGGCTGGCGAAGGCGGTGCGTCGCCGCCGGCGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EAFCCSAAWTSCHVA*RDGWRRRCVAAGGR Trigger: CCGGCCGCCGGCGGCGACGCACCGCCTTCGCCAGCCGTCACGGCAAGCGACATGGCAAGAAGTCCAGGCTGCGCTGCAGCAGAAAGCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS TCA 90 bp | TCACCCCAGGCTGCCCGCAACTCCAGGCACAGCTGCTTCCAAGGCTaGGGGCGCAGGCCCTGCCACACGTCGAAGACTTCCCAGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPQAARNSRHSCFQG*GRRPCHTSKTSQPA Trigger: GGCCGGCTGGGAAGTCTTCGACGTGTGGCAGGGCCTGCGCCCTCAGCCTTGGAAGCAGCTGTGCCTGGAGTTGCGGGCAGCCTGGGGTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CCA 90 bp | TTCTTGCGCTGCGATCTGGTGAACACTACAAGCAGGGCGCGCTCCTaGGGCGGCCTCACCCTCCGACCGAAGCCCAGACTCCGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLRCDLVNTTSRARS*GGLTLRPKPRLRRS Trigger: GGACCTGCGGAGTCTGGGCTTCGGTCGGAGGGTGAGGCCGCCCCAGGAGCGCGCCCTGCTTGTAGTGTTCACCAGATCGCAGCGCAAGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 90 bp | GCTGGCCATGACCCCTCGGCTCCCGCAGCCTCTGCAGAGCCCAGCTaGTCATGCATCTCAGTGAACAGGTTCTTGCGCTGCGATCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AGHDPSAPAASAEPS*SCISVNRFLRCDLV Trigger: CACCAGATCGCAGCGCAAGAACCTGTTCACTGAGATGCATGAGCAGCTGGGCTCTGCAGAGGCTGCGGGAGCCGAGGGGTCATGGCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 90 bp | AATTCACGTGCAGAGGCTTTCTGCTGCAGCGCAGCCTGGACTTCTTaGCATGTCGCTTGCCGTGACGGCTGGCGAAGGCGGTGCGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSRAEAFCCSAAWTS*HVACRDGWRRRCVA Trigger: GGCGACGCACCGCCTTCGCCAGCCGTCACGGCAAGCGACATGGCAAGAAGTCCAGGCTGCGCTGCAGCAGAAAGCCTCTGCACGTGAATT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 90 bp | GCAGAGCCCAGCTGCTCATGCATCTCAGTGAACAGGTTCTTGCGCTaGGATCTGGTGAACACTACAAGCAGGGCGCGCTCCTGGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEPSCSCISVNRFLR*DLVNTTSRARSWGG Trigger: GCCGCCCCAGGAGCGCGCCCTGCTTGTAGTGTTCACCAGATCGCAGCGCAAGAACCTGTTCACTGAGATGCATGAGCAGCTGGGCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS TCA 90 bp | CCCTGCCACACGTCGAAGACTTCCCAGCCGGCCTGGGTTGGTCCCTaGGGATCCAGGGTCCTGGCGTCCAGTAGCAATGGGGATAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: PCHTSKTSQPAWVGP*GSRVLASSSNGDKQ Trigger: TTGTTTATCCCCATTGCTACTGGACGCCAGGACCCTGGATCCTCAGGGACCAACCCAGGCCGGCTGGGAAGTCTTCGACGTGTGGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CAA 90 bp | AAGGTTCTGGGAAGGCTGGGCTGCTTCTTACTGTGCTCCTACTTTCAGGCTGTCCCCAGCCGGCCTGGGTaGGTCCCTGAGGATCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVLGRLGCFLLCSYFQAVPSRPG*VPEDPG Trigger: CCCTGGATCCTCAGGGACCAACCCAGGCCGGCTGGG...GACAGCCTGAAAGTAGGAGCACAGTAAGAAGCAGCCCAGCCTTCCCAGAACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 90 bp | CATGACCCCTCGGCTCCCGCAGCCTCTGCAGAGCCCAGCTGCTCATaGATCTCAGTGAACAGGTTCTTGCGCTGCGATCTGGTGAACACT | + |
|
Preference number: 5 (lower is better) Translates to: HDPSAPAASAEPSCS*ISVNRFLRCDLVNT Trigger: AGTGTTCACCAGATCGCAGCGCAAGAACCTGTTCACTGAGATGCATGAGCAGCTGGGCTCTGCAGAGGCTGCGGGAGCCGAGGGGTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS TCA 90 bp | GGCATTGATGCCCAGCTTCTCGGCAATGGAGTAAGTCTTGTAGATTaGCAGCATGTACTCGTGAGGCACCACGCGCAGCCCCCTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GIDAQLLGNGVSLVD*QHVLVRHHAQPPAR Trigger: CCGGGCAGGGGGCTGCGCGTGGTGCCTCACGAGTACATGCTGTCAATCTACAAGACTTACTCCATTGCCGAGAAGCTGGGCATCAATGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
||
| CDS GCA 90 bp | GGCCCTCGGCACTCTCTTGTGGAGTTCGCTGCATCTTCCCTTCTTTaGGGTTCCCCACGTCTTTGGTGGAGTCCAATTCGGTGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPRHSLVEFAASSLL*GSPRLWWSPIRWRR Trigger: CCTCCTCCACCGAATTGGACTCCACCAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGCAGCGAACTCCACAAGAGAGTGCCGAGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
||
| CDS-3UTR CAA 90 bp | AATGTTTCTCTAGGGGGAGCCCTGGGCTATTGCTGGCTGGTAATCTCTCAGGAAGTAGCCCCCAGGGCGTaGGGGGCGCCTGGCGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: NVSLGGALGYCWLVISQEVAPRA*GAPGDK Trigger: TTTATCGCCAGGCGCCCCCAACGCCCTGGGGGCTAC...TTCCTGAGAGATTACCAGCCAGCAATAGCCCAGGGCTCCCCCTAGAGAAACATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
||
| CDS CCA 90 bp | GTGGAGTTCGCTGCATCTTCCCTTCTTTGCGGTTCCCCACGTCTTTaGTGGAGTCCAATTCGGTGGAGGAGGAGGAGGACGAGGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: VEFAASSLLCGSPRL*WSPIRWRRRRTRRW Trigger: CCATCTCCTCGTCCTCCTCCTCCTCCACCGAATTGGACTCCACCAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGCAGCGAACTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
||
| CDS-3UTR CAA 90 bp | TGTGCTCCTACTTTCAGGCTGTCCCCCACCTGTGGCCTCTTCCAAGCCAGCTCCTGCATCTTCCCTTCTTaGCGGTTCCCCACGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CAPTFRLSPTCGLFQASSCIFPS*RFPTSL Trigger: CAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGCA...GGAGCTGGCTTGGAAGAGGCCACAGGTGGGGGACAGCCTGAAAGTAGGAGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
||
| CDS CCA 90 bp | TCCAATTCGGTGGAGGAGGAGGAGGACGAGGAGATGGAAGCCTGCTaGAAACCCGGCAAATCCCAGAGGAAGCTAATGAGGAAGATCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SNSVEEEEDEEMEAC*KPGKSQRKLMRKIA Trigger: GGCGATCTTCCTCATTAGCTTCCTCTGGGATTTGCCGGGTTTCCAGCAGGCTTCCATCTCCTCGTCCTCCTCCTCCTCCACCGAATTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
||
| CDS CCA 90 bp | GAGTTCGCTGCATCTTCCCTTCTTTGCGGTTCCCCACGTCTTTGGTaGAGTCCAATTCGGTGGAGGAGGAGGAGGACGAGGAGATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EFAASSLLCGSPRLW*SPIRWRRRRTRRWK Trigger: CTTCCATCTCCTCGTCCTCCTCCTCCTCCACCGAATTGGACTCCACCAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGCAGCGAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 90 bp | GAGTCCAATTCGGTGGAGGAGGAGGAGGACGAGGAGATGGAAGCCTaGTGGAAACCCGGCAAATCCCAGAGGAAGCTAATGAGGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: ESNSVEEEEDEEMEA*WKPGKSQRKLMRKI Trigger: GATCTTCCTCATTAGCTTCCTCTGGGATTTGCCGGGTTTCCAGCAGGCTTCCATCTCCTCGTCCTCCTCCTCCTCCACCGAATTGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CAA 90 bp | AGAGACTCCTGGCCCTTTCATCCTCCTTCCATGCTTGGGGCCTGGCCCTTTATCCCCACCAGCTCTTCTTaGTCTGAGAGTGTGGACACA | + |
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Preference number: 5 (lower is better) Translates to: RDSWPFHPPSMLGAWPFIPTSSS*SESVDT Trigger: TGTGTCCACACTCTCAGACAAAGAAGAGCTGGTGGG...GATAAAGGGCCAGGCCCCAAGCATGGAAGGAGGATGAAAGGGCCAGGAGTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CCA 90 bp | AAAGCCTTAGCTCTGCGCCCACCAGCTCTTCTTTGTCTGAGAGTGTaGACACATCAAACAAATACTTCTGTCTCCGGAGAGGAGTGTGCG | + |
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Preference number: 5 (lower is better) Translates to: KALALRPPALLCLRV*THQTNTSVSGEECA Trigger: CGCACACTCCTCTCCGGAGACAGAAGTATTTGTTTGATGTGTCCACACTCTCAGACAAAGAAGAGCTGGTGGGCGCAGAGCTAAGGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS TCA 90 bp | GAGATCGTCCAGTCCTCTGTCTACAAAGCTAGTGATCGTATTAGCTaGCTTGGAAGACTGGAAAAAGCTGGCATTGATGCCCAGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: EIVQSSVYKASDRIS*LGRLEKAGIDAQLL Trigger: GAGAAGCTGGGCATCAATGCCAGCTTTTTCCAGTCTTCCAAGTCAGCTAATACGATCACTAGCTTTGTAGACAGAGGACTGGACGATCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CAA 90 bp | AGCCATAATAAAAGAAAGAATCCTTCTTGTCTAGTCTTTCCAGGCTGGCAAGGCTCAGTGAACAGGTTCTaGCGCTGCGATCTGGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: SHNKRKNPSCLVFPGWQGSVNRF*RCDLVN Trigger: GTTCACCAGATCGCAGCGCAAGAACCTGTTCACTGA...GCCTTGCCAGCCTGGAAAGACTAGACAAGAAGGATTCTTTCTTTTATTATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CAA 90 bp | TTGGCTAGAAAGACCCAAAGGCCTCACTTTCTTACACAGGTAGAAACAACCAATCTAATGGGAGTCAGTTaGGTGGGAACGCAGCAGCTA | + |
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Preference number: 5 (lower is better) Translates to: LARKTQRPHFLTQVETTNLMGVS*VGTQQL Trigger: TAGCTGCTGCGTTCCCACCAAACTGACTCCCATTAG...ATTGGTTGTTTCTACCTGTGTAAGAAAGTGAGGCCTTTGGGTCTTTCTAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CAA 90 bp | GGCCTTGTGGTTTCTCATTATCCTTCACGGGGTTCCACACGGACTAATTCTTGTAGTAAGTCTTGTAGATaGACAGCATGTACTCGTGAG | + |
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Preference number: 5 (lower is better) Translates to: GLVVSHYPSRGSTRTNSCSKSCR*TACTRE Trigger: CTCACGAGTACATGCTGTCAATCTACAAGACTTACT...ACAAGAATTAGTCCGTGTGGAACCCCGTGAAGGATAATGAGAAACCACAAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS-3UTR CAA 90 bp | GGCCTTGTGGTTTCTCATTATCCTTCACGGGGTTCCACACGGACTAATTCTTGTATCGTATTAGCTGACTaGGAAGACTGGAAAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GLVVSHYPSRGSTRTNSCIVLAD*EDWKKL Trigger: CAGCTTTTTCCAGTCTTCCAAGTCAGCTAATACGAT...ACAAGAATTAGTCCGTGTGGAACCCCGTGAAGGATAATGAGAAACCACAAGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 90 bp | AGGCACCACGCGCAGCCCCCTGCCCGGCGGCTCCTGCCCCTGATGTaGTCCGGGCGGCCGCCGCCGGAGGTCCTTCTGCCGCAGCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: RHHAQPPARRLLPLM*SGRPPPEVLLPQPV Trigger: CACGGGCTGCGGCAGAAGGACCTCCGGCGGCGGCCGCCCGGACAACATCAGGGGCAGGAGCCGCCGGGCAGGGGGCTGCGCGTGGTGCCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CCA 72 bp | GCCTGGACTTCTTGCCATGTCGCTTGCCGTGACGGCTaGCGAAGGCGGTGCGTCGCCGCCGGCGGCCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: AWTSCHVACRDG*RRRCVAAGGRA Trigger: CGCCCGGCCGCCGGCGGCGACGCACCGCCTTCGCCAGCCGTCACGGCAAGCGACATGGCAAGAAGTCCAGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 72 bp | GCAAGTGCAGCGGTCGGGCCGGTAGCCCCCAGGGCGTaGGGGGCGCCTGGCGATAAAGCCTTAGCTCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: ASAAVGPVAPRA*GAPGDKALALR Trigger: GCGCAGAGCTAAGGCTTTATCGCCAGGCGCCCCCAACGCCCTGGGGGCTACCGGCCCGACCGCTGCACTTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 90 bp | GGAAGAGCTGCAAGTGCAGCGGTCGGGCCGGTAGCCCCCAGGGCGTaGGGGGCGCCTGGCGATAAAGCCTTAGCTCTGCGCCCACCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GRAASAAVGPVAPRA*GAPGDKALALRPPA Trigger: AGCTGGTGGGCGCAGAGCTAAGGCTTTATCGCCAGGCGCCCCCAACGCCCTGGGGGCTACCGGCCCGACCGCTGCACTTGCAGCTCTTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 72 bp | TGCTGCAGCGCAGCCTGGACTTCTTGCCATGTCGCTTaGCGTGACGGCTGGCGAAGGCGGTGCGTCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: CCSAAWTSCHVA*RDGWRRRCVAA Trigger: GGCGGCGACGCACCGCCTTCGCCAGCCGTCACGGCAAGCGACATGGCAAGAAGTCCAGGCTGCGCTGCAGCA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 90 bp | GGCGCAGGCCCTGCCACACGTCGAAGACTTCCCAGCCGGCCTGGGTaGGTCCCTGAGGATCCAGGGTCCTGGCGTCCAGTAGCAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: GAGPATRRRLPSRPG*VPEDPGSWRPVAMG Trigger: CCCCATTGCTACTGGACGCCAGGACCCTGGATCCTCAGGGACCAACCCAGGCCGGCTGGGAAGTCTTCGACGTGTGGCAGGGCCTGCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS TCA 72 bp | GCTGCCCGCAACTCCAGGCACAGCTGCTTCCAAGGCTaGGGGCGCAGGCCCTGCCACACGTCGAAGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: AARNSRHSCFQG*GRRPCHTSKTS Trigger: GGAAGTCTTCGACGTGTGGCAGGGCCTGCGCCCTCAGCCTTGGAAGCAGCTGTGCCTGGAGTTGCGGGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CCA 72 bp | TGCGATCTGGTGAACACTACAAGCAGGGCGCGCTCCTaGGGCGGCCTCACCCTCCGACCGAAGCCCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: CDLVNTTSRARS*GGLTLRPKPRL Trigger: GAGTCTGGGCTTCGGTCGGAGGGTGAGGCCGCCCCAGGAGCGCGCCCTGCTTGTAGTGTTCACCAGATCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 72 bp | GCAGAGGCTTTCTGCTGCAGCGCAGCCTGGACTTCTTaGCATGTCGCTTGCCGTGACGGCTGGCGAAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: AEAFCCSAAWTS*HVACRDGWRRR Trigger: CCGCCTTCGCCAGCCGTCACGGCAAGCGACATGGCAAGAAGTCCAGGCTGCGCTGCAGCAGAAAGCCTCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 72 bp | CCCGTGCTCCGGGGGCGTCCGGCCCTCGGCACTCTCTaGTGGAGTTCGCTGCATCTTCCCTTCTTTGCGGTT | + |
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Preference number: 6 (lower is better) Translates to: PVLRGRPALGTL*WSSLHLPFFAV Trigger: AACCGCAAAGAAGGGAAGATGCAGCGAACTCCACAAGAGAGTGCCGAGGGCCGGACGCCCCCGGAGCACGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 72 bp | CCTGCCACACGTCGAAGACTTCCCAGCCGGCCTGGGTaGGTCCCTGAGGATCCAGGGTCCTGGCGTCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: PATRRRLPSRPG*VPEDPGSWRPV Trigger: TACTGGACGCCAGGACCCTGGATCCTCAGGGACCAACCCAGGCCGGCTGGGAAGTCTTCGACGTGTGGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS TCA 72 bp | ACGTCGAAGACTTCCCAGCCGGCCTGGGTTGGTCCCTaGGGATCCAGGGTCCTGGCGTCCAGTAGCAATGGG | + |
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Preference number: 6 (lower is better) Translates to: TSKTSQPAWVGP*GSRVLASSSNG Trigger: CCCATTGCTACTGGACGCCAGGACCCTGGATCCTCAGGGACCAACCCAGGCCGGCTGGGAAGTCTTCGACGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 72 bp | GCGTCCAGTAGCAATGGGGATAAACAAGGGAAGAGCTaGAAGTGCAGCGGTCGGGCCGGTAGCCCCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ASSSNGDKQGKS*KCSGRAGSPQG Trigger: GCCCTGGGGGCTACCGGCCCGACCGCTGCACTTGCAGCTCTTCCCTTGTTTATCCCCATTGCTACTGGACGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 90 bp | GCCTCTGCAGAGCCCAGCTGCTCATGCATCTCAGTGAACAGGTTCTaGCGCTGCGATCTGGTGAACACTACAAGCAGGGCGCGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASAEPSCSCISVNRF*RCDLVNTTSRARSW Trigger: CCAGGAGCGCGCCCTGCTTGTAGTGTTCACCAGATCGCAGCGCAAGAACCTGTTCACTGAGATGCATGAGCAGCTGGGCTCTGCAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CCA 72 bp | AATTCACGTGCAGAGGCTTTCTGCTGCAGCGCAGCCTaGACTTCTTGCCATGTCGCTTGCCGTGACGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: NSRAEAFCCSAA*TSCHVACRDGW Trigger: CCAGCCGTCACGGCAAGCGACATGGCAAGAAGTCCAGGCTGCGCTGCAGCAGAAAGCCTCTGCACGTGAATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 90 bp | CGGCCCTCGGCACTCTCTTGTGGAGTTCGCTGCATCTTCCCTTCTTaGCGGTTCCCCACGTCTTTGGTGGAGTCCAATTCGGTGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RPSALSCGVRCIFPS*RFPTSLVESNSVEE Trigger: CTCCTCCACCGAATTGGACTCCACCAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGCAGCGAACTCCACAAGAGAGTGCCGAGGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 72 bp | TCGGTGGAGGAGGAGGAGGACGAGGAGATGGAAGCCTaGTGGAAACCCGGCAAATCCCAGAGGAAGCTAATG | + |
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Preference number: 6 (lower is better) Translates to: SVEEEEDEEMEA*WKPGKSQRKLM Trigger: CATTAGCTTCCTCTGGGATTTGCCGGGTTTCCAGCAGGCTTCCATCTCCTCGTCCTCCTCCTCCTCCACCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CCA 72 bp | GTGGAGGAGGAGGAGGACGAGGAGATGGAAGCCTGCTaGAAACCCGGCAAATCCCAGAGGAAGCTAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: VEEEEDEEMEAC*KPGKSQRKLMR Trigger: CCTCATTAGCTTCCTCTGGGATTTGCCGGGTTTCCAGCAGGCTTCCATCTCCTCGTCCTCCTCCTCCTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CCA 72 bp | AGTCCAATTCGGTGGAGGAGGAGGAGGACGAGGAGATaGAAGCCTGCTGGAAACCCGGCAAATCCCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SPIRWRRRRTRR*KPAGNPANPRG Trigger: TCCTCTGGGATTTGCCGGGTTTCCAGCAGGCTTCCATCTCCTCGTCCTCCTCCTCCTCCACCGAATTGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CCA 72 bp | GCATCTTCCCTTCTTTGCGGTTCCCCACGTCTTTGGTaGAGTCCAATTCGGTGGAGGAGGAGGAGGACGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASSLLCGSPRLW*SPIRWRRRRTR Trigger: CCTCGTCCTCCTCCTCCTCCACCGAATTGGACTCCACCAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CCA 72 bp | GCTGCATCTTCCCTTCTTTGCGGTTCCCCACGTCTTTaGTGGAGTCCAATTCGGTGGAGGAGGAGGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: AASSLLCGSPRL*WSPIRWRRRRT Trigger: CGTCCTCCTCCTCCTCCACCGAATTGGACTCCACCAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 90 bp | TGTGGAGTTCGCTGCATCTTCCCTTCTTTGCGGTTCCCCACGTCTTaGGTGGAGTCCAATTCGGTGGAGGAGGAGGAGGACGAGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: CGVRCIFPSLRFPTS*VESNSVEEEEDEEM Trigger: CATCTCCTCGTCCTCCTCCTCCTCCACCGAATTGGACTCCACCAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGCAGCGAACTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS TCA 72 bp | GCCCAGCTTCTCGGCAATGGAGTAAGTCTTGTAGATTaGCAGCATGTACTCGTGAGGCACCACGCGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: AQLLGNGVSLVD*QHVLVRHHAQP Trigger: GGGCTGCGCGTGGTGCCTCACGAGTACATGCTGTCAATCTACAAGACTTACTCCATTGCCGAGAAGCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 72 bp | AGCTGCTCATGCATCTCAGTGAACAGGTTCTTGCGCTaGGATCTGGTGAACACTACAAGCAGGGCGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SCSCISVNRFLR*DLVNTTSRARS Trigger: GGAGCGCGCCCTGCTTGTAGTGTTCACCAGATCGCAGCGCAAGAACCTGTTCACTGAGATGCATGAGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 72 bp | GAGCCCAGCTGCTCATGCATCTCAGTGAACAGGTTCTaGCGCTGCGATCTGGTGAACACTACAAGCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: EPSCSCISVNRF*RCDLVNTTSRA Trigger: CGCCCTGCTTGTAGTGTTCACCAGATCGCAGCGCAAGAACCTGTTCACTGAGATGCATGAGCAGCTGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 72 bp | CACTCTCTTGTGGAGTTCGCTGCATCTTCCCTTCTTTaGGGTTCCCCACGTCTTTGGTGGAGTCCAATTCGG | + |
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Preference number: 6 (lower is better) Translates to: HSLVEFAASSLL*GSPRLWWSPIR Trigger: CCGAATTGGACTCCACCAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGCAGCGAACTCCACAAGAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 72 bp | GCACTCTCTTGTGGAGTTCGCTGCATCTTCCCTTCTTaGCGGTTCCCCACGTCTTTGGTGGAGTCCAATTCG | + |
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Preference number: 6 (lower is better) Translates to: ALSCGVRCIFPS*RFPTSLVESNS Trigger: CGAATTGGACTCCACCAAAGACGTGGGGAACCGCAAAGAAGGGAAGATGCAGCGAACTCCACAAGAGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CCA 72 bp | GCTCTGCGCCCACCAGCTCTTCTTTGTCTGAGAGTGTaGACACATCAAACAAATACTTCTGTCTCCGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: ALRPPALLCLRV*THQTNTSVSGE Trigger: CTCTCCGGAGACAGAAGTATTTGTTTGATGTGTCCACACTCTCAGACAAAGAAGAGCTGGTGGGCGCAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 90 bp | TCGTCCAGTCCTCTGTCTACAAAGCTAGTGATCGTATTAGCTGACTaGGAAGACTGGAAAAAGCTGGCATTGATGCCCAGCTTCTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSSPLSTKLVIVLAD*EDWKKLALMPSFSA Trigger: TGCCGAGAAGCTGGGCATCAATGCCAGCTTTTTCCAGTCTTCCAAGTCAGCTAATACGATCACTAGCTTTGTAGACAGAGGACTGGACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS GCA 72 bp | ACATCAAACAAATACTTCTGTCTCCGGAGAGGAGTGTaGGAGAGATCGTCCAGTCCTCTGTCTACAAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: TSNKYFCLRRGV*ERSSSPLSTKL Trigger: TAGCTTTGTAGACAGAGGACTGGACGATCTCTCGCACACTCCTCTCCGGAGACAGAAGTATTTGTTTGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS CAA 72 bp | CCTCTGTCTACAAAGCTAGTGATCGTATTAGCTGACTaGGAAGACTGGAAAAAGCTGGCATTGATGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLSTKLVIVLAD*EDWKKLALMPS Trigger: GCTGGGCATCAATGCCAGCTTTTTCCAGTCTTCCAAGTCAGCTAATACGATCACTAGCTTTGTAGACAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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| CDS TCA 72 bp | CAGTCCTCTGTCTACAAAGCTAGTGATCGTATTAGCTaGCTTGGAAGACTGGAAAAAGCTGGCATTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: QSSVYKASDRIS*LGRLEKAGIDA Trigger: GGCATCAATGCCAGCTTTTTCCAGTCTTCCAAGTCAGCTAATACGATCACTAGCTTTGTAGACAGAGGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057613.3 |
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