Pregenerated sensors for GDF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038259Ensembl transcript IDs: ENSMUST00000040162.3
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTGGAGAGAAATGAAGAGGCCCCGGGCAGGAGAGATGGTGAACTaGGTCTCATTAAGAACACCTTTCCTGAGCCCCAGGCCCACTCAG | + |
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Preference number: 1 (lower is better) Translates to: VWREMKRPRAGEMVN*VSLRTPFLSPRPTQ Trigger: CTGAGTGGGCCTGGGGCTCAGGAAAGGTGTTCTTAATGAGACTCAGTTCACCATCTCTCCTGCCCGGGGCCTCTTCATTTCTCTCCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| 3UTR CCA 90 bp | AAGCCCTTTCCCCTTCTTTGCCCAGCCCCTGTAATGAACATCTCTTaGCAGAAAGTCACCAGGCACAAAGGTGATTCAAGGAGGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: KPFPLLCPAPVMNIS*QKVTRHKGDSRRRQ Trigger: CTGTCTCCTCCTTGAATCACCTTTGTGCCTGGTGACTTTCTGCCAAGAGATGTTCATTACAGGGGCTGGGCAAAGAAGGGGAAAGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCCTTCTTTGCCCAGCCCCTGTAATGAACATCTCTTGGCAGAAAGTCACCAGCTGGATGTGCCACCCTaGAAGACAGGTGGGCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SPSLPSPCNEHLLAESHQLDVPP*KTGGPV Trigger: CACTGGCCCACCTGTCTTCCAGGGTGGCACATCCAG...CTGGTGACTTTCTGCCAAGAGATGTTCATTACAGGGGCTGGGCAAAGAAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| 3UTR-3UTR CCA 90 bp | AGATCACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGGGAGGGGGTAGTCTCTaGATGTGCCACCCTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: RSHPESKPAENSFLQAARGGGSL*MCHPGR Trigger: TCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCC...CCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| 3UTR GCA 72 bp | CACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTaGAGGCTGCCAGGAAACTTCGGGCAGCAGCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: HIQRVSLLRTLS*RLPGNFGQQLH Trigger: GTGAAGCTGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| 3UTR TCA 72 bp | GAAATGAAGAGGCCCCGGGCAGGAGAGATGGTGAACTaGGTCTCATTAAGAACACCTTTCCTGAGCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: EMKRPRAGEMVN*VSLRTPFLSPR Trigger: CCTGGGGCTCAGGAAAGGTGTTCTTAATGAGACTCAGTTCACCATCTCTCCTGCCCGGGGCCTCTTCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| 3UTR CCA 72 bp | CCCCTTCTTTGCCCAGCCCCTGTAATGAACATCTCTTaGCAGAAAGTCACCAGGCACAAAGGTGATTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: PLLCPAPVMNIS*QKVTRHKGDSR Trigger: CCTTGAATCACCTTTGTGCCTGGTGACTTTCTGCCAAGAGATGTTCATTACAGGGGCTGGGCAAAGAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | CTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCAGCTTCACAGCAAGGCTGCCGGCTaGCGGCCGCTGGGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLRTLSCRLPGNFGQQLHSKAAG*RPLGQL Trigger: CAGCTGCCCCAGCGGCCGGCAGCCGGCAGCCTTGCT...GTGAAGCTGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | TCTGTTACTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGACCGGCTGCCGGCCGCTaGGGCAGCTGGACAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SVTPGTCGGGSLWMCHPGPAAGR*GSWTAS Trigger: TGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGG...TCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAGTAACAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | CTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGGGCTTGCCCTGGCGATTaGCCAATGGGGCCCGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: LQEPVEGVVSGCATLEDRACPGD*PMGPGV Trigger: AACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGC...CCTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCAGCTTCACCAACCCGCCCGCTACTaGGGACCGCTGGCTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LLRTLSCRLPGNFGQQLHQPARY*GPLAWP Trigger: TGGCCAAGCCAGCGGTCCCCAGTAGCGGGCGGGTTG...GTGAAGCTGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | CTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGGGGCCGCTGGGGCAGCTaGACAGCTTCAGTTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LQEPVEGVVSGCATLEDRGRWGS*TASVGQ Trigger: TTGCCCAACTGAAGCTGTCCAGCTGCCCCAGCGGCC...CCTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | CTCATTAAGAACACCTTTCCTGAGCCCCAGGCCCACTCAGAGTCTGTTCCTTGGCACATCCAGCAAGGCTaGCGGCTGCCGGCCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LIKNTFPEPQAHSESVPWHIQQG*RLPAAG Trigger: CCCAGCGGCCGGCAGCCGGCAGCCTTGCTGGATGTG...CCAAGGAACAGACTCTGAGTGGGCCTGGGGCTCAGGAAAGGTGTTCTTAATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | GTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGGTGGGCCAGTGCTAGGAAGCTGTCCTTTTaGGGTTACAGTCCGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VEGVVSGCATLEDRWASARKLSF*GYSPGC Trigger: GCAGCCCGGACTGTAACCCCAAAAGGACAGCTTCCT...AGCACTGGCCCACCTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR TCA 90 bp | CCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGGTGGGCCAGTGCCACAGCAAAAGAGTaGGGAGTTTGGGGAGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: PVEGVVSGCATLEDRWASATAKE*GVWGVS Trigger: TGAGACTCCCCAAACTCCTCACTCTTTTGCTGTGGC...ACTGGCCCACCTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | ACTTCTCTGGAGAGTCTGGAGAGAAATGAAGAGGCCCCGGGCAGGAGAGATGGTGGGGTGGCCTCTCCTTaGCCTCCGCTTTGGTCAACC | + |
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Preference number: 4 (lower is better) Translates to: TSLESLERNEEAPGRRDGGVASP*PPLWST Trigger: GGTTGACCAAAGCGGAGGCCAAGGAGAGGCCACCCC...ACCATCTCTCCTGCCCGGGGCCTCTTCATTTCTCTCCAGACTCTCCAGAGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | GAGAGTCTGGAGAGAAATGAAGAGGCCCCGGGCAGGAGAGATGGTGAACTGAGTAGCTTCCCTTGGCCCTaGCATTGGTGGCCCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: ESLERNEEAPGRRDGELSSFPWP*HWWPPH Trigger: GTGTGGGGGCCACCAATGCCAGGGCCAAGGGAAGCT...ACTCAGTTCACCATCTCTCCTGCCCGGGGCCTCTTCATTTCTCTCCAGACTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | TCTGTTACTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGACTGGGAAGAGGGTCCTaGCTTGGTTTCAGGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: SVTPGTCGGGSLWMCHPGLGRGS*LGFRAT Trigger: GGTGGCCCTGAAACCAAGCCAGGACCCTCTTCCCAG...TCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAGTAACAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | GCCCTTTCCCCTTCTTTGCCCAGCCCCTGTAATGAACATCTCTTGGCAGAAAGTGGCGGAACGGCTCCTTaGGCTCTCGAGGGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: ALSPSLPSPCNEHLLAESGGTAP*ALEGSQ Trigger: CTGGGACCCCTCGAGAGCCCAAGGAGCCGTTCCGCC...ACTTTCTGCCAAGAGATGTTCATTACAGGGGCTGGGCAAAGAAGGGGAAAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR TCA 90 bp | AGATCACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGCGTACCTCTGCTTCCTaGCCGCAGGGCCTCGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RSHPESKPAENSFLQAARRTSAS*PQGLGH Trigger: ATGACCGAGGCCCTGCGGTCAGGAAGCAGAGGTACG...CCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | TCTGTTACTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGATTCTTGGCCTGTGTCTaGCCAGAGCTTCCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SVTPGTCGGGSLWMCHPGFLACV*PELPLA Trigger: GGCCAAGGGAAGCTCTGGGCAGACACAGGCCAAGAA...TCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAGTAACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | CTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCAGCTTCACTCTTGCTGGGTCGCTTaGCCTGGCGATTGGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: LLRTLSCRLPGNFGQQLHSCWVA*PGDWPM Trigger: CATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGA...GTGAAGCTGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | GAGAGTCTGGAGAGAAATGAAGAGGCCCCGGGCAGGAGAGATGGTGAACTGAGTTGGTCAACCCTGGCTTaGCCCCTGGGGTTCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: ESLERNEEAPGRRDGELSWSTLA*PLGFSV Trigger: GACAGAGAACCCCAGGGGCCAAGCCAGGGTTGACCA...ACTCAGTTCACCATCTCTCCTGCCCGGGGCCTCTTCATTTCTCTCCAGACTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR TCA 90 bp | TCCAGATCACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCGACTGCAGCGAGCCTTaGGGTTCTTGCTGGGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: SRSHPESKPAENSFLQAADCSEP*GSCWVA Trigger: AGCGACCCAGCAAGAACCTCAAGGCTCGCTGCAGTC...GGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTGATCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | CTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCAGCTTCACTCAAACACGTACCTCTaGTTCCTGACCGCAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LLRTLSCRLPGNFGQQLHSNTYL*FLTAGP Trigger: AGGCCCTGCGGTCAGGAAGCAGAGGTACGTGTTTGA...GTGAAGCTGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | CTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGGTCCTTGAAGTTGACATaGAAGGCCTTGCGACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LQEPVEGVVSGCATLEDRSLKLT*KALRLQ Trigger: CTGCAGTCGCAAGGCCTTGCATGTCAACTTCAAGGA...CCTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | TCTGTTACTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGATCAGCAGGAAGGAGCTaGGGGCAGATCCTGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: SVTPGTCGGGSLWMCHPGSAGRS*GQILLL Trigger: CAAAAGCAGGATCTGCCCCCAGCTCCTTCCTGCTGA...TCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAGTAACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | ACATCTCTTGGCAGAAAGTCACCAGGCACAAAGGTGATTCAAGGAGGAGACAGCCTGGGTCGCTTGCCCTaGCGATTGGCCAATGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TSLGRKSPGTKVIQGGDSLGRLP*RLANGA Trigger: GGCCCCATTGGCCAATCGCCAGGGCAAGCGACCCAG...GCTGTCTCCTCCTTGAATCACCTTTGTGCCTGGTGACTTTCTGCCAAGAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCAGCTTCACTTTGTGGGCTCCAAGTaGGAGCGCAAGGGGAACTCA | + |
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Preference number: 4 (lower is better) Translates to: LLRTLSCRLPGNFGQQLHFVGSK*ERKGNS Trigger: TGAGTTCCCCTTGCGCTCCCACTTGGAGCCCACAAA...GTGAAGCTGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | CACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACGGTTACAGTCCGGGCTaGAGCCTGTCTAGTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: HIQRVSLLRTLSCRLPGNGYSPG*SLSSLG Trigger: TCCCAGACTAGACAGGCTGCAGCCCGGACTGTAACC...GTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | CTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGGCTTTTGAAGATGCTTTaGCCCCAGGAAGCTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LQEPVEGVVSGCATLEDRLLKML*PQEAVL Trigger: AAGGACAGCTTCCTGGGGGCAAAGCATCTTCAAAAG...CCTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | GAGAGTCTGGAGAGAAATGAAGAGGCCCCGGGCAGGAGAGATGGTGAACTGAGTTGGGTTCATCCTTCTTaGCCTGTGTCTGCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ESLERNEEAPGRRDGELSWVHPS*PVSAQS Trigger: GCTCTGGGCAGACACAGGCCAAGAAGGATGAACCCA...ACTCAGTTCACCATCTCTCCTGCCCGGGGCCTCTTCATTTCTCTCCAGACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | GCCCTTTCCCCTTCTTTGCCCAGCCCCTGTAATGAACATCTCTTGGCAGAAAGTCTGGACAGCTTCAGTTaGGCAACCCGCCCGCTACTG | + |
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Preference number: 4 (lower is better) Translates to: ALSPSLPSPCNEHLLAESLDSFS*ATRPLL Trigger: CAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAG...ACTTTCTGCCAAGAGATGTTCATTACAGGGGCTGGGCAAAGAAGGGGAAAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | GCCCTTTCCCCTTCTTTGCCCAGCCCCTGTAATGAACATCTCTTGGCAGAAAGTAGATCCATCCAGGCCTaGCACGGAGCGCACATCCAG | + |
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Preference number: 4 (lower is better) Translates to: ALSPSLPSPCNEHLLAESRSIQA*HGAHIQ Trigger: CTGGATGTGCGCTCCGTGCCAGGCCTGGATGGATCT...ACTTTCTGCCAAGAGATGTTCATTACAGGGGCTGGGCAAAGAAGGGGAAAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR TCA 90 bp | CTCATTAAGAACACCTTTCCTGAGCCCCAGGCCCACTCAGAGTCTGTTCCTTGGGGCAGATCCTGCTTTTaGAGATGCTTTGCCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LIKNTFPEPQAHSESVPWGRSCF*RCFAPR Trigger: CCTGGGGGCAAAGCATCTTCAAAAGCAGGATCTGCC...CCAAGGAACAGACTCTGAGTGGGCCTGGGGCTCAGGAAAGGTGTTCTTAATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | CTCATTAAGAACACCTTTCCTGAGCCCCAGGCCCACTCAGAGTCTGTTCCTTGGTGGCCCTGGCATTGGTaGCCCCCACACCATAGATAT | + |
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Preference number: 4 (lower is better) Translates to: LIKNTFPEPQAHSESVPWWPWHW*PPHHRY Trigger: ATATCTATGGTGTGGGGGCCACCAATGCCAGGGCCA...CCAAGGAACAGACTCTGAGTGGGCCTGGGGCTCAGGAAAGGTGTTCTTAATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | TCACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAAAAGAGGGTCCTGGCTTaGTTTCAGGGCCACCGGATC | + |
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Preference number: 4 (lower is better) Translates to: SHPESKPAENSFLQAARKKRVLA*FQGHRI Trigger: GATCCGGTGGCCCTGAAACCAAGCCAGGACCCTCTT...TTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | ACTTCTCTGGAGAGTCTGGAGAGAAATGAAGAGGCCCCGGGCAGGAGAGATGGTACAGTCTTGTCATCCTaGCCAGAGCGGGCCTTAATC | + |
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Preference number: 4 (lower is better) Translates to: TSLESLERNEEAPGRRDGTVLSS*PERALI Trigger: GATTAAGGCCCGCTCTGGCCAGGATGACAAGACTGT...ACCATCTCTCCTGCCCGGGGCCTCTTCATTTCTCTCCAGACTCTCCAGAGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR TCA 90 bp | CTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCAGCTTCACCAGGCACAGCTGCGCTaGGTTCTTAAAATTTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: LLRTLSCRLPGNFGQQLHQAQLR*VLKISE Trigger: TTCCGAAATTTTAAGAACTCAGCGCAGCTGTGCCTG...GTGAAGCTGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | AGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCAGGGCCTCGGTCATCTTaGCCTTTGTCAATAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SKPAENSFLQAARKLRAAGPRSS*PLSIKL Trigger: CAGCTTTATTGACAAAGGGCAAGATGACCGAGGCCC...TGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | TCACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAAAACAAGGCTTTCTCGTaGACCTGTCGGGCAGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: SHPESKPAENSFLQAARKNKAFS*TCRAVR Trigger: ACGCACTGCCCGACAGGTCCACGAGAAAGCCTTGTT...TTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | ACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCAGCTTCACAGGCTCTCTAGCTCCAGGCACAGCTaGGCTGAGTTCTTAAAATTT | + |
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Preference number: 4 (lower is better) Translates to: TLSCRLPGNFGQQLHRLSSSRHS*AEFLKF Trigger: AAATTTTAAGAACTCAGCGCAGCTGTGCCTGGAGCT...AGAGAGCCTGTGAAGCTGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | GCCCTTTCCCCTTCTTTGCCCAGCCCCTGTAATGAACATCTCTTGGCAGAAAGTCCTCCAACTTCACGCTaGTGTTACCTCCCTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ALSPSLPSPCNEHLLAESPPTSR*CYLPFC Trigger: ACAGAAAGGGAGGTAACAGCAGCGTGAAGTTGGAGG...ACTTTCTGCCAAGAGATGTTCATTACAGGGGCTGGGCAAAGAAGGGGAAAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR TCA 90 bp | AGTCTAATTAGGCTCATACTCTTCTCTTCACCCCTGCCCAAGCCCTTTCCCCTTCCTTCTCCAAGGCACTaGTGTCAAACACGTACCTCT | + |
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Preference number: 4 (lower is better) Translates to: SLIRLILFSSPLPKPFPLPSPRH*CQTRTS Trigger: AGAGGTACGTGTTTGACATCAGTGCCTTGGAGAAGG...AAGGGGAAAGGGCTTGGGCAGGGGTGAAGAGAAGAGTATGAGCCTAATTAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR TCA 90 bp | TCACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAAGTTTCCGCCGCTGGCTaGACAAATATTCATACACAG | + |
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Preference number: 4 (lower is better) Translates to: SHPESKPAENSFLQAARKVSAAG*TNIHTQ Trigger: CTGTGTATGAATATTTGTTCAGCCAGCGGCGGAAAC...TTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR GCA 90 bp | ACATCTCTTGGCAGAAAGTCACCAGGCACAAAGGTGATTCAAGGAGGAGACAGCCTCATACTCAAGAGGTaGGATGATCCAGTCGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TSLGRKSPGTKVIQGGDSLILKR*DDPVVP Trigger: TGGGACGACTGGATCATCGCACCTCTTGAGTATGAG...GCTGTCTCCTCCTTGAATCACCTTTGTGCCTGGTGACTTTCTGCCAAGAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS-3UTR CCA 90 bp | ACATCTCTTGGCAGAAAGTCACCAGGCACAAAGGTGATTCAAGGAGGAGACAGCACAGGTCCCGTTTCTTaGTACGACCAAACACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSLGRKSPGTKVIQGGDSTGPVS*YDQTLG Trigger: TCCTAGTGTTTGGTCGTACCAAGAAACGGGACCTGT...GCTGTCTCCTCCTTGAATCACCTTTGTGCCTGGTGACTTTCTGCCAAGAGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | AAGGCTGCCGGCTGCCGGCCGCTGGGGCAGCTGGACAGCTTCAGTTaGGCAACCCGCCCGCTACTGGGGACCGCTGGCTTGGCCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KAAGCRPLGQLDSFS*ATRPLLGTAGLATS Trigger: GGACGTGGCCAAGCCAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCAGCCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS GCA 90 bp | CCATCCAGGCCTGGCACGGAGCGCACATCCAGCAAGGCTGCCGGCTaGCGGCCGCTGGGGCAGCTGGACAGCTTCAGTTGGGCAACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSRPGTERTSSKAAG*RPLGQLDSFSWATR Trigger: GCGGGTTGCCCAACTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCAGCCTTGCTGGATGTGCGCTCCGTGCCAGGCCTGGATGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | AGCGCACATCCAGCAAGGCTGCCGGCTGCCGGCCGCTGGGGCAGCTaGACAGCTTCAGTTGGGCAACCCGCCCGCTACTGGGGACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAHPARLPAAGRWGS*TASVGQPARYWGPL Trigger: CAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCAGCCTTGCTGGATGTGCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | CTGGCACGGAGCGCACATCCAGCAAGGCTGCCGGCTGCCGGCCGCTaGGGCAGCTGGACAGCTTCAGTTGGGCAACCCGCCCGCTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LARSAHPARLPAAGR*GSWTASVGQPARYW Trigger: CCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCAGCCTTGCTGGATGTGCGCTCCGTGCCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS GCA 90 bp | GCCAGATCCATCCAGGCCTGGCACGGAGCGCACATCCAGCAAGGCTaGCGGCTGCCGGCCGCTGGGGCAGCTGGACAGCTTCAGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARSIQAWHGAHIQQG*RLPAAGAAGQLQLG Trigger: GCCCAACTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCAGCCTTGCTGGATGTGCGCTCCGTGCCAGGCCTGGATGGATCTGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | GAGCTTCCAGATGTCGAACACCTCCCAGCCAGATCCATCCAGGCCTaGCACGGAGCGCACATCCAGCAAGGCTGCCGGCTGCCGGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ELPDVEHLPARSIQA*HGAHIQQGCRLPAA Trigger: AGCGGCCGGCAGCCGGCAGCCTTGCTGGATGTGCGCTCCGTGCCAGGCCTGGATGGATCTGGCTGGGAGGTGTTCGACATCTGGAAGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | CGCTGGGGCAGCTGGACAGCTTCAGTTGGGCAACCCGCCCGCTACTaGGGACCGCTGGCTTGGCCACGTCCAAGGGCTTCTTCCGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RWGSWTASVGQPARY*GPLAWPRPRASSVR Trigger: TCTTACGGAAGAAGCCCTTGGACGTGGCCAAGCCAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAGCTGCCCCAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | TTGCGACTGCAGCGAGCCTTGAGGTTCTTGCTGGGTCGCTTGCCCTaGCGATTGGCCAATGGGGCCCGGCGTTTCCGCCGCTGGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRLQRALRFLLGRLP*RLANGARRFRRWLN Trigger: GTTCAGCCAGCGGCGGAAACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAACCTCAAGGCTCGCTGCAGTCGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | ACAGCTTCAGTTGGGCAACCCGCCCGCTACTGGGGACCGCTGGCTTaGCCACGTCCAAGGGCTTCTTCCGTAAGATCCGCAGTTCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TASVGQPARYWGPLA*PRPRASSVRSAVQP Trigger: GGGCTGAACTGCGGATCTTACGGAAGAAGCCCTTGGACGTGGCCAAGCCAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGGTCCTTGGCCTCCGCTTaGGTCAACCCTGGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQEPVEGVVSGCATLEDRSLASA*VNPGLA Trigger: GGCCAAGCCAGGGTTGACCAAAGCGGAGGCCAAGGA...CCTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | ACCATAGATATGACCCCCTGGCCTAAAGACATTCCTGGCCAGGGGTaGCCTCTCCTTGGCCTCCGCTTTGGTCAACCCTGGCTTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TIDMTPWPKDIPGQG*PLLGLRFGQPWLGP Trigger: GGGGCCAAGCCAGGGTTGACCAAAGCGGAGGCCAAGGAGAGGCCACCCCTGGCCAGGAATGTCTTTAGGCCAGGGGGTCATATCTATGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CTCATTAAGAACACCTTTCCTGAGCCCCAGGCCCACTCAGAGTCTGTTCCTTGGCGCTTGCCCTGGCGATaGGCCAATGGGGCCCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LIKNTFPEPQAHSESVPWRLPWR*ANGARR Trigger: ACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCG...CCAAGGAACAGACTCTGAGTGGGCCTGGGGCTCAGGAAAGGTGTTCTTAATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS TCA 90 bp | TGCCCTGGCGATTGGCCAATGGGGCCCGGCGTTTCCGCCGCTGGCTaGACAAATATTCATACACAGTCTTGTCATCCTGGCCAGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CPGDWPMGPGVSAAG*TNIHTQSCHPGQSG Trigger: CCCGCTCTGGCCAGGATGACAAGACTGTGTATGAATATTTGTTCAGCCAGCGGCGGAAACGCCGGGCCCCATTGGCCAATCGCCAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGGTGGGCCAGTGGGCAGATCCTGCTTTaGAAGATGCTTTGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVEGVVSGCATLEDRWASGQILL*KMLCPQ Trigger: CTGGGGGCAAAGCATCTTCAAAAGCAGGATCTGCCC...ACTGGCCCACCTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTGGAGAGTCTGGAGAGAAATGAAGAGGCCCCGGGCAGGAGAGATGGTGCGACTGCAGCGAGCCTaGAGGTTCTTGCTGGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LLWRVWREMKRPRAGEMVRLQRA*RFLLGR Trigger: GCGACCCAGCAAGAACCTCAAGGCTCGCTGCAGTCG...CACCATCTCTCCTGCCCGGGGCCTCTTCATTTCTCTCCAGACTCTCCAGAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | CGCTTGCCCTGGCGATTGGCCAATGGGGCCCGGCGTTTCCGCCGCTaGCTGAACAAATATTCATACACAGTCTTGTCATCCTGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLPWRLANGARRFRR*LNKYSYTVLSSWPE Trigger: CTCTGGCCAGGATGACAAGACTGTGTATGAATATTTGTTCAGCCAGCGGCGGAAACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | AGCCTTGAGGTTCTTGCTGGGTCGCTTGCCCTGGCGATTGGCCAATaGGGCCCGGCGTTTCCGCCGCTGGCTGAACAAATATTCATACAC | + |
|
Preference number: 5 (lower is better) Translates to: SLEVLAGSLALAIGQ*GPAFPPLAEQIFIH Trigger: GTGTATGAATATTTGTTCAGCCAGCGGCGGAAACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAACCTCAAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTGGAGAGTCTGGAGAGAAATGAAGAGGCCCCGGGCAGGAGAGATGGTGTTGGTCAACCCTGGCTaGGCCCCTGGGGTTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLWRVWREMKRPRAGEMVLVNPG*APGVLC Trigger: ACAGAGAACCCCAGGGGCCAAGCCAGGGTTGACCAA...CACCATCTCTCCTGCCCGGGGCCTCTTCATTTCTCTCCAGACTCTCCAGAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | AGATCACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGTGCCCAGAGCTTCCCTaGGCCCTGGCATTGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSHPESKPAENSFLQAARCPELP*ALALVA Trigger: GGCCACCAATGCCAGGGCCAAGGGAAGCTCTGGGCA...CCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTGATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | TCACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACTGGGGACCGCTGGCTaGGCCACGTCCAAGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHPESKPAENSFLQAARKLGTAG*ATSKGF Trigger: GAAGCCCTTGGACGTGGCCAAGCCAGCGGTCCCCAG...TTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | GAGAGTCTGGAGAGAAATGAAGAGGCCCCGGGCAGGAGAGATGGTGAACTGAGTCGAGCCTTGAGGTTCTaGCTGGGTCGCTTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESLERNEEAPGRRDGELSRALRF*LGRLPW Trigger: CCAGGGCAAGCGACCCAGCAAGAACCTCAAGGCTCG...ACTCAGTTCACCATCTCTCCTGCCCGGGGCCTCTTCATTTCTCTCCAGACTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | TCCCGTTTCTTGGTACGACCAAACACTAGGAACAAGGCTTTCTCGTaGACCTGTCGGGCAGTGCGTTCAAAGCCCAGGCCACGGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRFLVRPNTRNKAFS*TCRAVRSKPRPRRS Trigger: GGACCTCCGTGGCCTGGGCTTTGAACGCACTGCCCGACAGGTCCACGAGAAAGCCTTGTTCCTAGTGTTTGGTCGTACCAAGAAACGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CTCATTAAGAACACCTTTCCTGAGCCCCAGGCCCACTCAGAGTCTGTTCCTTGGAGGGGTGGCCTCTCCTaGGCCTCCGCTTTGGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LIKNTFPEPQAHSESVPWRGGLS*ASALVN Trigger: GTTGACCAAAGCGGAGGCCAAGGAGAGGCCACCCCT...CCAAGGAACAGACTCTGAGTGGGCCTGGGGCTCAGGAAAGGTGTTCTTAATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | ACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCAGCTTCACAGGCTCTCTCTGGGTTCATCCTTCTaGGCCTGTGTCTGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLSCRLPGNFGQQLHRLSLGSSF*ACVCPE Trigger: CTCTGGGCAGACACAGGCCAAGAAGGATGAACCCAG...AGAGAGCCTGTGAAGCTGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGGTGGGCCAGTTATTCATACACAGTCTaGTCATCCTGGCCAGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PVEGVVSGCATLEDRWASYSYTV*SSWPER Trigger: CCGCTCTGGCCAGGATGACAAGACTGTGTATGAATA...ACTGGCCCACCTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | TCTGTTACTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGATTGACATGCAAGGCCTaGCGACTGCAGCGAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVTPGTCGGGSLWMCHPGLTCKA*RLQRAL Trigger: CAAGGCTCGCTGCAGTCGCAAGGCCTTGCATGTCAA...TCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAGTAACAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACGAAGAGGGTCCTGGCTaGGTTTCAGGGCCACCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HIQRVSLLRTLSCRLPGNEEGPG*VSGPPD Trigger: ATCCGGTGGCCCTGAAACCAAGCCAGGACCCTCTTC...GTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | AGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCATTCTTGCTGGGTCGCTaGCCCTGGCGATTGGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SKPAENSFLQAARKLRAAFLLGR*PWRLAN Trigger: ATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAA...TGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | ACTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGCCCATGTCCTTGAAGTaGACATGCAAGGCCTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: TPGTCGGGSLWMCHPGRQPMSLK*TCKALR Trigger: TCGCAAGGCCTTGCATGTCAACTTCAAGGACATGGG...CTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | ACTCTTTCCTGCAGGCTGCCAGGAAACTTCGGGCAGCAGCTTCACAGGCTCTCTTCCCAGCCCATGTCCTaGAAGTTGACATGCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSCRLPGNFGQQLHRLSSQPMS*KLTCKA Trigger: GGCCTTGCATGTCAACTTCAAGGACATGGGCTGGGA...AGAGAGCCTGTGAAGCTGCTGCCCGAAGTTTCCTGGCAGCCTGCAGGAAAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CTCATTAAGAACACCTTTCCTGAGCCCCAGGCCCACTCAGAGTCTGTTCCTTGGCAGGAAGCTGTCCTTTaGGGGTTACAGTCCGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LIKNTFPEPQAHSESVPWQEAVL*GLQSGL Trigger: CAGCCCGGACTGTAACCCCAAAAGGACAGCTTCCTG...CCAAGGAACAGACTCTGAGTGGGCCTGGGGCTCAGGAAAGGTGTTCTTAATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTGGAGAGTCTGGAGAGAAATGAAGAGGCCCCGGGCAGGAGAGATGGTGGCTTTTGAAGATGCTTaGCCCCCAGGAAGCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLWRVWREMKRPRAGEMVAFEDA*PPGSCP Trigger: AGGACAGCTTCCTGGGGGCAAAGCATCTTCAAAAGC...CACCATCTCTCCTGCCCGGGGCCTCTTCATTTCTCTCCAGACTCTCCAGAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | GTCTCATTAAGAACACCTTTCCTGAGCCCCAGGCCCACTCAGAGTCTGTTCCTTAAGCTGGTGATGGTGTaGGCCAGGCCAGCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSLRTPFLSPRPTQSLFLKLVMV*ARPASN Trigger: GTTGGAGGCTGGCCTGGCCAACACCATCACCAGCTT...AAGGAACAGACTCTGAGTGGGCCTGGGGCTCAGGAAAGGTGTTCTTAATGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | ACATCTCTTGGCAGAAAGTCACCAGGCACAAAGGTGATTCAAGGAGGAGACAGCGCTGGACAGCTTCAGTaGGGCAACCCGCCCGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: TSLGRKSPGTKVIQGGDSAGQLQ*GNPPAT Trigger: AGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAGC...GCTGTCTCCTCCTTGAATCACCTTTGTGCCTGGTGACTTTCTGCCAAGAGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | CTCCAGGAACCTGTGGAGGGGGTAGTCTCTGGATGTGCCACCCTGGAAGACAGGTTATACACCACGTTGTaGGCAGAGTCGATGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQEPVEGVVSGCATLEDRLYTTL*AESMKR Trigger: CCTCTTCATCGACTCTGCCAACAACGTGGTGTATAA...CCTGTCTTCCAGGGTGGCACATCCAGAGACTACCCCCTCCACAGGTTCCTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS GCA 90 bp | AACAGCCCATCCTTCTCCAAGGCACTGATGTCAAACACGTACCTCTaGTTCCTGACCGCAGGGCCTCGGTCATCTTGCCCTTTGTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: NSPSFSKALMSNTYL*FLTAGPRSSCPLSI Trigger: TATTGACAAAGGGCAAGATGACCGAGGCCCTGCGGTCAGGAAGCAGAGGTACGTGTTTGACATCAGTGCCTTGGAGAAGGATGGGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | TCCAGATCACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAACAGGTCCCGTTTCTaGGTACGACCAAACACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSHPESKPAENSFLQAANRSRF*VRPNTR Trigger: CCTAGTGTTTGGTCGTACCAAGAAACGGGACCTGTT...GGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTGATCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | AGATCACATCCAGAGAGTAAGCCTGCTGAGAACTCTTTCCTGCAGGCTGCCAGGTGTTTATACACCACGTaGTTGGCAGAGTCGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSHPESKPAENSFLQAARCLYTT*LAESMK Trigger: CTTCATCGACTCTGCCAACAACGTGGTGTATAAACA...CCTGGCAGCCTGCAGGAAAGAGTTCTCAGCAGGCTTACTCTCTGGATGTGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 90 bp | TTCCGCCGCTGGCTGAACAAATATTCATACACAGTCTTGTCATCCTaGCCAGAGCGGGCCTTAATCTCATTAAAGAACAGGTCCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FRRWLNKYSYTVLSS*PERALISLKNRSRF Trigger: GAAACGGGACCTGTTCTTTAATGAGATTAAGGCCCGCTCTGGCCAGGATGACAAGACTGTGTATGAATATTTGTTCAGCCAGCGGCGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS-3UTR CAA 90 bp | ACATCTCTTGGCAGAAAGTCACCAGGCACAAAGGTGATTCAAGGAGGAGACAGCCGGTCATCTTGCCCTTaGTCAATAAAGCTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TSLGRKSPGTKVIQGGDSRSSCP*SIKLVM Trigger: CATCACCAGCTTTATTGACAAAGGGCAAGATGACCG...GCTGTCTCCTCCTTGAATCACCTTTGTGCCTGGTGACTTTCTGCCAAGAGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CAA 90 bp | CAAGGCTGCCGGCTGCCGGCCGCTGGGGCAGCTGGACAGCTTCAGTaGGGCAACCCGCCCGCTACTGGGGACCGCTGGCTTGGCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: QGCRLPAAGAAGQLQ*GNPPATGDRWLGHV Trigger: GACGTGGCCAAGCCAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCAGCCTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 72 bp | GGCTGCCGGCCGCTGGGGCAGCTGGACAGCTTCAGTTaGGCAACCCGCCCGCTACTGGGGACCGCTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GCRPLGQLDSFS*ATRPLLGTAGL Trigger: CAAGCCAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 72 bp | CCAGCAAGGCTGCCGGCTGCCGGCCGCTGGGGCAGCTaGACAGCTTCAGTTGGGCAACCCGCCCGCTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: PARLPAAGRWGS*TASVGQPARYW Trigger: CCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCAGCCTTGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CAA 72 bp | CGGCTGCCGGCCGCTGGGGCAGCTGGACAGCTTCAGTaGGGCAACCCGCCCGCTACTGGGGACCGCTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RLPAAGAAGQLQ*GNPPATGDRWL Trigger: AAGCCAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS GCA 72 bp | CCTGGCACGGAGCGCACATCCAGCAAGGCTGCCGGCTaGCGGCCGCTGGGGCAGCTGGACAGCTTCAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGTERTSSKAAG*RPLGQLDSFSW Trigger: CCAACTGAAGCTGTCCAGCTGCCCCAGCGGCCGGCAGCCGGCAGCCTTGCTGGATGTGCGCTCCGTGCCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
||
| CDS CCA 72 bp | CAGCGAGCCTTGAGGTTCTTGCTGGGTCGCTTGCCCTaGCGATTGGCCAATGGGGCCCGGCGTTTCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QRALRFLLGRLP*RLANGARRFRR Trigger: GCGGCGGAAACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAACCTCAAGGCTCGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 72 bp | GCCTTGAGGTTCTTGCTGGGTCGCTTGCCCTGGCGATaGGCCAATGGGGCCCGGCGTTTCCGCCGCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ALRFLLGRLPWR*ANGARRFRRWL Trigger: CAGCCAGCGGCGGAAACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAACCTCAAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 90 bp | AAGGCCTTGCGACTGCAGCGAGCCTTGAGGTTCTTGCTGGGTCGCTaGCCCTGGCGATTGGCCAATGGGGCCCGGCGTTTCCGCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: KALRLQRALRFLLGR*PWRLANGARRFRRW Trigger: CCAGCGGCGGAAACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAACCTCAAGGCTCGCTGCAGTCGCAAGGCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CCA 72 bp | GTTGGGCAACCCGCCCGCTACTGGGGACCGCTGGCTTaGCCACGTCCAAGGGCTTCTTCCGTAAGATCCGCA | + |
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Preference number: 6 (lower is better) Translates to: VGQPARYWGPLA*PRPRASSVRSA Trigger: TGCGGATCTTACGGAAGAAGCCCTTGGACGTGGCCAAGCCAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CCA 72 bp | AGCTGGACAGCTTCAGTTGGGCAACCCGCCCGCTACTaGGGACCGCTGGCTTGGCCACGTCCAAGGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SWTASVGQPARY*GPLAWPRPRAS Trigger: AGAAGCCCTTGGACGTGGCCAAGCCAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTCCAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CCA 72 bp | GATGTCGAACACCTCCCAGCCAGATCCATCCAGGCCTaGCACGGAGCGCACATCCAGCAAGGCTGCCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: DVEHLPARSIQA*HGAHIQQGCRL Trigger: CAGCCGGCAGCCTTGCTGGATGTGCGCTCCGTGCCAGGCCTGGATGGATCTGGCTGGGAGGTGTTCGACATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 72 bp | AGTTGGGCAACCCGCCCGCTACTGGGGACCGCTGGCTaGGCCACGTCCAAGGGCTTCTTCCGTAAGATCCGC | + |
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Preference number: 6 (lower is better) Translates to: SWATRPLLGTAG*ATSKGFFRKIR Trigger: GCGGATCTTACGGAAGAAGCCCTTGGACGTGGCCAAGCCAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 72 bp | CGACTGCAGCGAGCCTTGAGGTTCTTGCTGGGTCGCTaGCCCTGGCGATTGGCCAATGGGGCCCGGCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RLQRALRFLLGR*PWRLANGARRF Trigger: GAAACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAACCTCAAGGCTCGCTGCAGTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 90 bp | GACAGCTTCAGTTGGGCAACCCGCCCGCTACTGGGGACCGCTGGCTaGGCCACGTCCAAGGGCTTCTTCCGTAAGATCCGCAGTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: DSFSWATRPLLGTAG*ATSKGFFRKIRSSA Trigger: GGCTGAACTGCGGATCTTACGGAAGAAGCCCTTGGACGTGGCCAAGCCAGCGGTCCCCAGTAGCGGGCGGGTTGCCCAACTGAAGCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 90 bp | CTGCAGCGAGCCTTGAGGTTCTTGCTGGGTCGCTTGCCCTGGCGATaGGCCAATGGGGCCCGGCGTTTCCGCCGCTGGCTGAACAAATAT | + |
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Preference number: 6 (lower is better) Translates to: LQRALRFLLGRLPWR*ANGARRFRRWLNKY Trigger: ATATTTGTTCAGCCAGCGGCGGAAACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAACCTCAAGGCTCGCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 90 bp | AAGTTGACATGCAAGGCCTTGCGACTGCAGCGAGCCTTGAGGTTCTaGCTGGGTCGCTTGCCCTGGCGATTGGCCAATGGGGCCCGGCGT | + |
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Preference number: 6 (lower is better) Translates to: KLTCKALRLQRALRF*LGRLPWRLANGARR Trigger: ACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAACCTCAAGGCTCGCTGCAGTCGCAAGGCCTTGCATGTCAACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CCA 72 bp | ATGACCCCCTGGCCTAAAGACATTCCTGGCCAGGGGTaGCCTCTCCTTGGCCTCCGCTTTGGTCAACCCTGG | + |
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Preference number: 6 (lower is better) Translates to: MTPWPKDIPGQG*PLLGLRFGQPW Trigger: CCAGGGTTGACCAAAGCGGAGGCCAAGGAGAGGCCACCCCTGGCCAGGAATGTCTTTAGGCCAGGGGGTCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CCA 72 bp | GTTCTTGCTGGGTCGCTTGCCCTGGCGATTGGCCAATaGGGCCCGGCGTTTCCGCCGCTGGCTGAACAAATA | + |
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Preference number: 6 (lower is better) Translates to: VLAGSLALAIGQ*GPAFPPLAEQI Trigger: TATTTGTTCAGCCAGCGGCGGAAACGCCGGGCCCCATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 72 bp | TGCAAGGCCTTGCGACTGCAGCGAGCCTTGAGGTTCTaGCTGGGTCGCTTGCCCTGGCGATTGGCCAATGGG | + |
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Preference number: 6 (lower is better) Translates to: CKALRLQRALRF*LGRLPWRLANG Trigger: CCCATTGGCCAATCGCCAGGGCAAGCGACCCAGCAAGAACCTCAAGGCTCGCTGCAGTCGCAAGGCCTTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS TCA 72 bp | TCTGTCCTAAGTCAGGGGCACCCAGCACAGTGCAGATaGGTTCCAGGTCCAGCCAAGCCAGGTGCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SVLSQGHPAQCR*VPGPAKPGATA Trigger: TGCTGTGGCACCTGGCTTGGCTGGACCTGGAACTCATCTGCACTGTGCTGGGTGCCCCTGACTTAGGACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS GCA 72 bp | GGCATCTTTCTGGGTTCATCCTTCTTGGCCTGTGTCTaGCCAGAGCTTCCCTTGGCCCTGGCATTGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GIFLGSSFLACV*PELPLALALVA Trigger: GGCCACCAATGCCAGGGCCAAGGGAAGCTCTGGGCAGACACAGGCCAAGAAGGATGAACCCAGAAAGATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CCA 72 bp | AAGAGGGTCCTGGCTTGGTTTCAGGGCCACCGGATCTaGGGGGCATCTTTCTGGGTTCATCCTTCTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: KRVLAWFQGHRI*GASFWVHPSWP Trigger: AGGCCAAGAAGGATGAACCCAGAAAGATGCCCCCCAGATCCGGTGGCCCTGAAACCAAGCCAGGACCCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CCA 72 bp | TCCCAGGCTCCCTGGTCTTCTTCAGCAGGAAGGAGCTaGGGGCAGATCCTGCTTTTGAAGATGCTTTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SQAPWSSSAGRS*GQILLLKMLCP Trigger: GGGGCAAAGCATCTTCAAAAGCAGGATCTGCCCCCAGCTCCTTCCTGCTGAAGAAGACCAGGGAGCCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 72 bp | AAGTTGACATGCAAGGCCTTGCGACTGCAGCGAGCCTaGAGGTTCTTGCTGGGTCGCTTGCCCTGGCGATTG | + |
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Preference number: 6 (lower is better) Translates to: KLTCKALRLQRA*RFLLGRLPWRL Trigger: CAATCGCCAGGGCAAGCGACCCAGCAAGAACCTCAAGGCTCGCTGCAGTCGCAAGGCCTTGCATGTCAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS GCA 72 bp | TCCTTCTCCAAGGCACTGATGTCAAACACGTACCTCTaGTTCCTGACCGCAGGGCCTCGGTCATCTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SFSKALMSNTYL*FLTAGPRSSCP Trigger: AGGGCAAGATGACCGAGGCCCTGCGGTCAGGAAGCAGAGGTACGTGTTTGACATCAGTGCCTTGGAGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 90 bp | GGGCCTCGGTCATCTTGCCCTTTGTCAATAAAGCTGGTGATGGTGTaGGCCAGGCCAGCCTCCAACTTCACGCTGCTGTTACCTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: GPRSSCPLSIKLVMV*ARPASNFTLLLPPF Trigger: AAAGGGAGGTAACAGCAGCGTGAAGTTGGAGGCTGGCCTGGCCAACACCATCACCAGCTTTATTGACAAAGGGCAAGATGACCGAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS TCA 72 bp | GATTGGCCAATGGGGCCCGGCGTTTCCGCCGCTGGCTaGACAAATATTCATACACAGTCTTGTCATCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: DWPMGPGVSAAG*TNIHTQSCHPG Trigger: GCCAGGATGACAAGACTGTGTATGAATATTTGTTCAGCCAGCGGCGGAAACGCCGGGCCCCATTGGCCAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CCA 72 bp | TTGGTACGACCAAACACTAGGAACAAGGCTTTCTCGTaGACCTGTCGGGCAGTGCGTTCAAAGCCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LVRPNTRNKAFS*TCRAVRSKPRP Trigger: TGGCCTGGGCTTTGAACGCACTGCCCGACAGGTCCACGAGAAAGCCTTGTTCCTAGTGTTTGGTCGTACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CCA 72 bp | TGGCGATTGGCCAATGGGGCCCGGCGTTTCCGCCGCTaGCTGAACAAATATTCATACACAGTCTTGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: WRLANGARRFRR*LNKYSYTVLSS Trigger: GGATGACAAGACTGTGTATGAATATTTGTTCAGCCAGCGGCGGAAACGCCGGGCCCCATTGGCCAATCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 90 bp | GCCCGGCGTTTCCGCCGCTGGCTGAACAAATATTCATACACAGTCTaGTCATCCTGGCCAGAGCGGGCCTTAATCTCATTAAAGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: ARRFRRWLNKYSYTV*SSWPERALISLKNR Trigger: CCTGTTCTTTAATGAGATTAAGGCCCGCTCTGGCCAGGATGACAAGACTGTGTATGAATATTTGTTCAGCCAGCGGCGGAAACGCCGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 72 bp | TCATCTTGCCCTTTGTCAATAAAGCTGGTGATGGTGTaGGCCAGGCCAGCCTCCAACTTCACGCTGCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: SSCPLSIKLVMV*ARPASNFTLLL Trigger: TAACAGCAGCGTGAAGTTGGAGGCTGGCCTGGCCAACACCATCACCAGCTTTATTGACAAAGGGCAAGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 90 bp | TGGCCAGAGCGGGCCTTAATCTCATTAAAGAACAGGTCCCGTTTCTaGGTACGACCAAACACTAGGAACAAGGCTTTCTCGTGGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: WPERALISLKNRSRF*VRPNTRNKAFSWTC Trigger: ACAGGTCCACGAGAAAGCCTTGTTCCTAGTGTTTGGTCGTACCAAGAAACGGGACCTGTTCTTTAATGAGATTAAGGCCCGCTCTGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 72 bp | TTCCGCCGCTGGCTGAACAAATATTCATACACAGTCTaGTCATCCTGGCCAGAGCGGGCCTTAATCTCATTA | + |
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Preference number: 6 (lower is better) Translates to: FRRWLNKYSYTV*SSWPERALISL Trigger: TAATGAGATTAAGGCCCGCTCTGGCCAGGATGACAAGACTGTGTATGAATATTTGTTCAGCCAGCGGCGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CAA 72 bp | CGGGCCTTAATCTCATTAAAGAACAGGTCCCGTTTCTaGGTACGACCAAACACTAGGAACAAGGCTTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: RALISLKNRSRF*VRPNTRNKAFS Trigger: CGAGAAAGCCTTGTTCCTAGTGTTTGGTCGTACCAAGAAACGGGACCTGTTCTTTAATGAGATTAAGGCCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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| CDS CCA 72 bp | TGGCTGAACAAATATTCATACACAGTCTTGTCATCCTaGCCAGAGCGGGCCTTAATCTCATTAAAGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: WLNKYSYTVLSS*PERALISLKNR Trigger: CCTGTTCTTTAATGAGATTAAGGCCCGCTCTGGCCAGGATGACAAGACTGTGTATGAATATTTGTTCAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040162.3 |
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