Pregenerated sensors for GDF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072625Ensembl transcript IDs: ENSMUST00000100720.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGCAGATCGTGTTGGAGCACAGCAAGCAGCCTATTCATCGTGGTaGGTGTGGACCTGGCTCAGCCCTACCTGGCCTCAAGAGGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: QADRVGAQQAAYSSW*VWTWLSPTWPQEGP Trigger: AGGCCCCTCTTGAGGCCAGGTAGGGCTGAGCCAGGTCCACACCCACCACGATGAATAGGCTGCTTGCTGTGCTCCAACACGATCTGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 90 bp | GATTGCCAGAGGGCATCAGGCTCTTCCTCACCCCATTCAGTCCTATaGGCCACAGGAGAGTCAGCTGGGAGCTTGAGGCACAGGAACAGC | + |
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Preference number: 1 (lower is better) Translates to: DCQRASGSSSPHSVL*ATGESAGSLRHRNS Trigger: GCTGTTCCTGTGCCTCAAGCTCCCAGCTGACTCTCCTGTGGCTCATAGGACTGAATGGGGTGAGGAAGAGCCTGATGCCCTCTGGCAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 90 bp | CACCCCATTCAGTCCTATGAGCCACAGGAGAGTCAGCTGGGAGCTTaGGGCACAGGAACAGCAATGCTGTTCTCCCTGAGGACACACTCC | + |
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Preference number: 1 (lower is better) Translates to: HPIQSYEPQESQLGA*GTGTAMLFSLRTHS Trigger: GGAGTGTGTCCTCAGGGAGAACAGCATTGCTGTTCCTGTGCCTCAAGCTCCCAGCTGACTCTCCTGTGGCTCATAGGACTGAATGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR CCA 90 bp | GTTGGAGCACAGCAAGCAGCCTATTCATCGTGGTGGGTGTGGACCTaGCTCAGCCCTACCTGGCCTCAAGAGGGGCCTTCAATATCTAGT | + |
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Preference number: 1 (lower is better) Translates to: VGAQQAAYSSWWVWT*LSPTWPQEGPSISS Trigger: ACTAGATATTGAAGGCCCCTCTTGAGGCCAGGTAGGGCTGAGCCAGGTCCACACCCACCACGATGAATAGGCTGCTTGCTGTGCTCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 90 bp | GTCAGCTGGGAGCTTGAGGCACAGGAACAGCAATGCTGTTCTCCCTaGGGACACACTCCCAAGGAAGAACAAGTCGGTGGGGATGATGAG | + |
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Preference number: 1 (lower is better) Translates to: VSWELEAQEQQCCSP*GHTPKEEQVGGDDE Trigger: CTCATCATCCCCACCGACTTGTTCTTCCTTGGGAGTGTGTCCTCAGGGAGAACAGCATTGCTGTTCCTGTGCCTCAAGCTCCCAGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR CCA 90 bp | ACGTCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTaGACAGCACTGCCATGCTACGCTGGCTGGCATGTTTTAGGGATT | + |
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Preference number: 1 (lower is better) Translates to: TSLGPEEDVTTHHHL*TALPCYAGWHVLGI Trigger: AATCCCTAAAACATGCCAGCCAGCGTAGCATGGCAGTGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 90 bp | CTGACAGTCAGAGGTCACGACGCACATCTCAGTGGAGTGTGGCAGTaGCAGGAAGCAGCAGCTGGAGTTCACTCCTTCCTTCACACCTTA | + |
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Preference number: 1 (lower is better) Translates to: LTVRGHDAHLSGVWQ*QEAAAGVHSFLHTL Trigger: TAAGGTGTGAAGGAAGGAGTGAACTCCAGCTGCTGCTTCCTGTCACTGCCACACTCCACTGAGATGTGCGTCGTGACCTCTGACTGTCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR GCA 90 bp | TTCCTTTTTGACATCTTTCTACCCACTAACCCTTCCAGGGTCTCCTaGTCTGCCCACAGGCCCGCATACCCCAGTCATTGTCACTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: FLFDIFLPTNPSRVS*SAHRPAYPSHCHFS Trigger: GCTGAAGTGACAATGACTGGGGTATGCGGGCCTGTGGGCAGAGCAGGAGACCCTGGAAGGGTTAGTGGGTAGAAAGATGTCAAAAAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR GCA 90 bp | TCCCGTGCAGCTCTCTGCACATCACCTGTATCTTCTGCTAGTTTCTaGCTGGTTTCCTGCCGTTCCCAGATCATCTACCCACAGCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: SRAALCTSPVSSASF*LVSCRSQIIYPQLP Trigger: AGGAAGCTGTGGGTAGATGATCTGGGAACGGCAGGAAACCAGGCAGAAACTAGCAGAAGATACAGGTGATGTGCAGAGAGCTGCACGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR CCA 90 bp | CGTCACCACCCACCACCATCTGTGGACAGCACTGCCATGCTACGCTaGCTGGCATGTTTTAGGGATTTATCTTTTCTCCAGCTCTACCAA | + |
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Preference number: 1 (lower is better) Translates to: RHHPPPSVDSTAMLR*LACFRDLSFLQLYQ Trigger: TTGGTAGAGCTGGAGAAAAGATAAATCCCTAAAACATGCCAGCCAGCGTAGCATGGCAGTGCTGTCCACAGATGGTGGTGGGTGGTGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 90 bp | TATCTAGTGACTCCATCAATACACACTGATCTGCTAAACCACATGTaGCACTTGGGAAGGTGTCACAATTTGGGGCCCAACAGACCTGGG | + |
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Preference number: 1 (lower is better) Translates to: YLVTPSIHTDLLNHM*HLGRCHNLGPNRPG Trigger: CCCAGGTCTGTTGGGCCCCAAATTGTGACACCTTCCCAAGTGTCACATGTGGTTTAGCAGATCAGTGTGTATTGATGGAGTCACTAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 90 bp | AAAATTATGTTGGAGCATCAGTCAATGAGAGTTGTCCAGATGTTTTaGAGTCCTTCGGGCTCTGATTGCCAGAGGGCATCAGGCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: KIMLEHQSMRVVQMF*SPSGSDCQRASGSS Trigger: GGAAGAGCCTGATGCCCTCTGGCAATCAGAGCCCGAAGGACTTCAAAACATCTGGACAACTCTCATTGACTGATGCTCCAACATAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCACAGTGCACGTCAGAGGGCTGAGGTCCTGAACTGTCTCCCTTCTGTGGTTCCTTCCAGGGTCTCCTaGTCTGCCCACAGGCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: GHSARQRAEVLNCLPSVVPSRVS*SAHRPA Trigger: TGCGGGCCTGTGGGCAGAGCAGGAGACCCTGGAAGG...AACCACAGAAGGGAGACAGTTCAGGACCTCAGCCCTCTGACGTGCACTGTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR TCA 90 bp | CACCACCCACCACCATCTGTGGACAGCACTGCCATGCTACGCTGGCTGGCATGTAGAGGGCTGAGGTCCTaGACTGTCTCCCTTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: HHPPPSVDSTAMLRWLACRGLRS*TVSLLW Trigger: CCACAGAAGGGAGACAGTTCAGGACCTCAGCCCTCT...ACATGCCAGCCAGCGTAGCATGGCAGTGCTGTCCACAGATGGTGGTGGGTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR TCA 90 bp | CACCACCCACCACCATCTGTGGACAGCACTGCCATGCTACGCTGGCTGGCATGTAAGTCCTTCGGGCTCTaGTTGCCAGAGGGCATCAGG | + |
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Preference number: 2 (lower is better) Translates to: HHPPPSVDSTAMLRWLACKSFGL*LPEGIR Trigger: CCTGATGCCCTCTGGCAATCAGAGCCCGAAGGACTT...ACATGCCAGCCAGCGTAGCATGGCAGTGCTGTCCACAGATGGTGGTGGGTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR CAA 90 bp | TTCCAGGGTCTCCTGCTCTGCCCACAGGCCCGCATACCCCAGTCATaGTCACTTCAGCAGAGGGACCCACCAGACACAAGAAGGGCAACT | + |
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Preference number: 2 (lower is better) Translates to: FQGLLLCPQARIPQS*SLQQRDPPDTRRAT Trigger: AGTTGCCCTTCTTGTGTCTGGTGGGTCCCTCTGCTGAAGTGACAATGACTGGGGTATGCGGGCCTGTGGGCAGAGCAGGAGACCCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCACTGAGTGGAGTGTGGCAGTaGCAGGAAGCAGCAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SLGPEEDVTTHHHLWTALSGVWQ*QEAAAG Trigger: TCCAGCTGCTGCTTCCTGTCACTGCCACACTCCACT...CAGTGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCACTGGCCTATTCATCGTGGTaGGTGTGGACCTGGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SLGPEEDVTTHHHLWTALAYSSW*VWTWLS Trigger: GCTGAGCCAGGTCCACACCCACCACGATGAATAGGC...CAGTGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR GCA 90 bp | GACACACTCCCAAGGAAGAACAAGTCGGTGGGGATGATGAGGAAGCAGAGTTCTGGCAGGAGATGCTCCTaGCTGTGGATTTGGCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: DTLPRKNKSVGMMRKQSSGRRCS*LWIWPD Trigger: GTCTGGCCAAATCCACAGGCAGGAGCATCTCCTGCC...AGAACTCTGCTTCCTCATCATCCCCACCGACTTGTTCTTCCTTGGGAGTGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CCA 90 bp | GACACACTCCCAAGGAAGAACAAGTCGGTGGGGATGATGAGGAAGCAGAGTTCTGAAGGTGTCACAATTTaGGGCCCAACAGACCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: DTLPRKNKSVGMMRKQSSEGVTI*GPTDLG Trigger: CCCCAGGTCTGTTGGGCCCCAAATTGTGACACCTTC...AGAACTCTGCTTCCTCATCATCCCCACCGACTTGTTCTTCCTTGGGAGTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCACAGTGCACGTCAGAGGGCTGAGGTCCTGAACTGTCTCCCTTCTGTGGTTACCACATGTGACACTTaGGAAGGTGTCACAATTTGG | + |
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Preference number: 2 (lower is better) Translates to: GHSARQRAEVLNCLPSVVTTCDT*EGVTIW Trigger: CCAAATTGTGACACCTTCCCAAGTGTCACATGTGGT...AACCACAGAAGGGAGACAGTTCAGGACCTCAGCCCTCTGACGTGCACTGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCACTGTCCTGCCTGTGGATTTaGCCAGACAGAGTAGATAAT | + |
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Preference number: 2 (lower is better) Translates to: SLGPEEDVTTHHHLWTALSCLWI*PDRVDN Trigger: ATTATCTACTCTGTCTGGCCAAATCCACAGGCAGGA...CAGTGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR GCA 90 bp | GCATGTTTTAGGGATTTATCTTTTCTCCAGCTCTACCAACTAAACACCAATGCTCAGGGTCTCCTGCTCTaGCCACAGGCCCGCATACCC | + |
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Preference number: 2 (lower is better) Translates to: ACFRDLSFLQLYQLNTNAQGLLL*PQARIP Trigger: GGGTATGCGGGCCTGTGGGCAGAGCAGGAGACCCTG...AGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAAAGATAAATCCCTAAAACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCTTCACACCTTATGTTGTCAGAATGAGTCTCAGCTTCCTAGACCCTGTGCTGCTAGTTTCTGCCTaGTTTCCTGCCGTTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PSFTPYVVRMSLSFLDPVLLVSA*FPAVPR Trigger: TCTGGGAACGGCAGGAAACCAGGCAGAAACTAGCAG...CACAGGGTCTAGGAAGCTGAGACTCATTCTGACAACATAAGGTGTGAAGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CCA 90 bp | ACGTCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCATTTTCTTCTCAAGGATaGTTTCTGATCAACTTAGGC | + |
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Preference number: 2 (lower is better) Translates to: TSLGPEEDVTTHHHLWTAFSSQG*FLINLG Trigger: GCCTAAGTTGATCAGAAACCATCCTTGAGAAGAAAA...TGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CCA 90 bp | GACACACTCCCAAGGAAGAACAAGTCGGTGGGGATGATGAGGAAGCAGAGTTCTCCTTCTGTGGTTGTTTaGGGATATTTCTTCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: DTLPRKNKSVGMMRKQSSPSVVV*GYFFRG Trigger: TCCCCTGAAGAAATATCCCCAAACAACCACAGAAGG...AGAACTCTGCTTCCTCATCATCCCCACCGACTTGTTCTTCCTTGGGAGTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCCAGCTCTACCAACTAAACACCAATGCTCCATTGTATTTTGTGTTAAAGCACAGGAGAGTCAGCTaGGAGCTTGAGGCACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: FLQLYQLNTNAPLYFVLKHRRVS*ELEAQE Trigger: TTCCTGTGCCTCAAGCTCCCAGCTGACTCTCCTGTG...CTTTAACACAAAATACAATGGAGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CCA 90 bp | TTATCTTTTCTCCAGCTCTACCAACTAAACACCAATGCTCCATTGTATTTTGTGAGATGCTCCTGCCTGTaGATTTGGCCAGACAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: LSFLQLYQLNTNAPLYFVRCSCL*IWPDRV Trigger: TACTCTGTCTGGCCAAATCCACAGGCAGGAGCATCT...CACAAAATACAATGGAGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAAAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCCAGCTCTACCAACTAAACACCAATGCTCCATTGTATTTTGTGTTAAAGTGGCTTGCTGAGTTTTaGTTTCTACAACTGACAGTC | + |
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Preference number: 2 (lower is better) Translates to: FLQLYQLNTNAPLYFVLKWLAEF*FLQLTV Trigger: GACTGTCAGTTGTAGAAACCAAAACTCAGCAAGCCA...CTTTAACACAAAATACAATGGAGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR CCA 72 bp | CAGCAAGCAGCCTATTCATCGTGGTGGGTGTGGACCTaGCTCAGCCCTACCTGGCCTCAAGAGGGGCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: QQAAYSSWWVWT*LSPTWPQEGPS Trigger: TGAAGGCCCCTCTTGAGGCCAGGTAGGGCTGAGCCAGGTCCACACCCACCACGATGAATAGGCTGCTTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR CCA 72 bp | CGTGTTGGAGCACAGCAAGCAGCCTATTCATCGTGGTaGGTGTGGACCTGGCTCAGCCCTACCTGGCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: RVGAQQAAYSSW*VWTWLSPTWPQ Trigger: TTGAGGCCAGGTAGGGCTGAGCCAGGTCCACACCCACCACGATGAATAGGCTGCTTGCTGTGCTCCAACACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGCTCTTCCTCACCCCATTCAGTCCTATGAGCCACAGGAGAGTCAGCTGGGAAGCAAGCAGATCGTGTaGGAGCACAGCAAGCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: QALPHPIQSYEPQESQLGSKQIV*EHSKQP Trigger: AGGCTGCTTGCTGTGCTCCAACACGATCTGCTTGCT...TCCCAGCTGACTCTCCTGTGGCTCATAGGACTGAATGGGGTGAGGAAGAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 72 bp | CAGTCCTATGAGCCACAGGAGAGTCAGCTGGGAGCTTaGGGCACAGGAACAGCAATGCTGTTCTCCCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: QSYEPQESQLGA*GTGTAMLFSLR Trigger: CCTCAGGGAGAACAGCATTGCTGTTCCTGTGCCTCAAGCTCCCAGCTGACTCTCCTGTGGCTCATAGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 72 bp | AGAGGTCACGACGCACATCTCAGTGGAGTGTGGCAGTaGCAGGAAGCAGCAGCTGGAGTTCACTCCTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: RGHDAHLSGVWQ*QEAAAGVHSFL Trigger: AAGGAAGGAGTGAACTCCAGCTGCTGCTTCCTGTCACTGCCACACTCCACTGAGATGTGCGTCGTGACCTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 72 bp | GAGCTTGAGGCACAGGAACAGCAATGCTGTTCTCCCTaGGGACACACTCCCAAGGAAGAACAAGTCGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: ELEAQEQQCCSP*GHTPKEEQVGG Trigger: CCCACCGACTTGTTCTTCCTTGGGAGTGTGTCCTCAGGGAGAACAGCATTGCTGTTCCTGTGCCTCAAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 72 bp | AAACTCTCCCTCACACACAGACACGTCACTGGGACCTaGAGAAGACGTCACCACCCACCACCATCTGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: KLSLTHRHVTGT*RRRHHPPPSVD Trigger: GTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGTGTCTGTGTGTGAGGGAGAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CAA 90 bp | TCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCACTGCCCTTCTGTGGTTGTTaGGGGATATTTCTTCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SLGPEEDVTTHHHLWTALPFCGC*GIFLQG Trigger: CCCCTGAAGAAATATCCCCAAACAACCACAGAAGGG...CAGTGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CAA 90 bp | CACCACCCACCACCATCTGTGGACAGCACTGCCATGCTACGCTGGCTGGCATGTGTCTCCCTTCTGTGGTaGTTTGGGGATATTTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: HHPPPSVDSTAMLRWLACVSLLW*FGDISS Trigger: TGAAGAAATATCCCCAAACAACCACAGAAGGGAGAC...ACATGCCAGCCAGCGTAGCATGGCAGTGCTGTCCACAGATGGTGGTGGGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR TCA 72 bp | GAGAGTTGTCCAGATGTTTTGAAGTCCTTCGGGCTCTaGTTGCCAGAGGGCATCAGGCTCTTCCTCACCCCA | + |
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Preference number: 3 (lower is better) Translates to: ESCPDVLKSFGL*LPEGIRLFLTP Trigger: TGGGGTGAGGAAGAGCCTGATGCCCTCTGGCAATCAGAGCCCGAAGGACTTCAAAACATCTGGACAACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR CCA 72 bp | ACCCCATTCAGTCCTATGAGCCACAGGAGAGTCAGCTaGGAGCTTGAGGCACAGGAACAGCAATGCTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: TPFSPMSHRRVS*ELEAQEQQCCS Trigger: AGAACAGCATTGCTGTTCCTGTGCCTCAAGCTCCCAGCTGACTCTCCTGTGGCTCATAGGACTGAATGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR CCA 72 bp | CTAAGTAAAACTCTCCCTCACACACAGACACGTCACTaGGACCTGAAGAAGACGTCACCACCCACCACCATC | + |
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Preference number: 3 (lower is better) Translates to: LSKTLPHTQTRH*DLKKTSPPTTI Trigger: GATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGTGTCTGTGTGTGAGGGAGAGTTTTACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGCTCTTCCTCACCCCATTCAGTCCTATGAGCCACAGGAGAGTCAGCTGGGACCCACAGCTTCCTTTTaGACATCTTTCTACCCACTA | + |
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Preference number: 3 (lower is better) Translates to: QALPHPIQSYEPQESQLGPTASF*TSFYPL Trigger: TAGTGGGTAGAAAGATGTCAAAAAGGAAGCTGTGGG...TCCCAGCTGACTCTCCTGTGGCTCATAGGACTGAATGGGGTGAGGAAGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR-3UTR CAA 90 bp | TCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCACTGGTCATAGTCATTGGCTaGCTGAGTTTTGGTTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: SLGPEEDVTTHHHLWTALVIVIG*LSFGFY Trigger: GTAGAAACCAAAACTCAGCAAGCCAATGACTATGAC...CAGTGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR GCA 72 bp | GCTCTCTGCACATCACCTGTATCTTCTGCTAGTTTCTaGCTGGTTTCCTGCCGTTCCCAGATCATCTACCCA | + |
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Preference number: 3 (lower is better) Translates to: ALCTSPVSSASF*LVSCRSQIIYP Trigger: TGGGTAGATGATCTGGGAACGGCAGGAAACCAGGCAGAAACTAGCAGAAGATACAGGTGATGTGCAGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR CCA 72 bp | CCACCACCATCTGTGGACAGCACTGCCATGCTACGCTaGCTGGCATGTTTTAGGGATTTATCTTTTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: PPPSVDSTAMLR*LACFRDLSFLQ Trigger: CTGGAGAAAAGATAAATCCCTAAAACATGCCAGCCAGCGTAGCATGGCAGTGCTGTCCACAGATGGTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR GCA 72 bp | TCTCAAGGATGGTTTCTGATCAACTTAGGCATACCATaGGCAGGAGGATGCAGGACCGTACCAGAACCTCTT | + |
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Preference number: 3 (lower is better) Translates to: SQGWFLINLGIP*AGGCRTVPEPL Trigger: AAGAGGTTCTGGTACGGTCCTGCATCCTCCTGCGCATGGTATGCCTAAGTTGATCAGAAACCATCCTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR CCA 72 bp | CACCATCTGTGGACAGCACTGCCATGCTACGCTGGCTaGCATGTTTTAGGGATTTATCTTTTCTCCAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: HHLWTALPCYAG*HVLGIYLFSSS Trigger: AGAGCTGGAGAAAAGATAAATCCCTAAAACATGCCAGCCAGCGTAGCATGGCAGTGCTGTCCACAGATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| 3UTR GCA 72 bp | TCACCTGTATCTTCTGCTAGTTTCTGCCTGGTTTCCTaGCGTTCCCAGATCATCTACCCACAGCTTCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPVSSASFCLVS*RSQIIYPQLPF Trigger: AAAAGGAAGCTGTGGGTAGATGATCTGGGAACGGCAGGAAACCAGGCAGAAACTAGCAGAAGATACAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| 3UTR CCA 72 bp | CCTCTGCTGAGTCATAGTCATTGGCTTGCTGAGTTTTaGTTTCTACAACTGACAGTCAGAGGTCACGACGCA | + |
|
Preference number: 3 (lower is better) Translates to: PLLSHSHWLAEF*FLQLTVRGHDA Trigger: TGCGTCGTGACCTCTGACTGTCAGTTGTAGAAACCAAAACTCAGCAAGCCAATGACTATGACTCAGCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| 3UTR TCA 72 bp | ACTCCATCAATACACACTGATCTGCTAAACCACATGTaGCACTTGGGAAGGTGTCACAATTTGGGGCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: TPSIHTDLLNHM*HLGRCHNLGPN Trigger: GTTGGGCCCCAAATTGTGACACCTTCCCAAGTGTCACATGTGGTTTAGCAGATCAGTGTGTATTGATGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATCTTTTCTCCAGCTCTACCAACTAAACACCAATGCTCCATTGTATTTTGTGGAGTCAGCTGGGAGCTaGAGGCACAGGAACAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSFLQLYQLNTNAPLYFVESAGS*RHRNSN Trigger: ATTGCTGTTCCTGTGCCTCAAGCTCCCAGCTGACTC...CACAAAATACAATGGAGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAAAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| 3UTR CCA 72 bp | ACAAGAAGGGCAACTAACTCCTTTTCTTCTCAAGGATaGTTTCTGATCAACTTAGGCATACCATGCGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TRRATNSFSSQG*FLINLGIPCAG Trigger: TCCTGCGCATGGTATGCCTAAGTTGATCAGAAACCATCCTTGAGAAGAAAAGGAGTTAGTTGCCCTTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| 3UTR CAA 72 bp | CTCCTGCTCTGCCCACAGGCCCGCATACCCCAGTCATaGTCACTTCAGCAGAGGGACCCACCAGACACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLCPQARIPQS*SLQQRDPPDTR Trigger: TCTTGTGTCTGGTGGGTCCCTCTGCTGAAGTGACAATGACTGGGGTATGCGGGCCTGTGGGCAGAGCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | CACCACCCACCACCATCTGTGGACAGCACTGCCATGCTACGCTGGCTGGCATGTCTGGTGATCTGCTCGTaGCTCGGGATGGAGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HHPPPSVDSTAMLRWLACLVICS*LGMEML Trigger: CAACATCTCCATCCCGAGGCACGAGCAGATCACCAG...ACATGCCAGCCAGCGTAGCATGGCAGTGCTGTCCACAGATGGTGGTGGGTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCTTCCTCACCCCATTCAGTCCTATGAGCCACAGGAGAGTCAGCTGGGAGGGGTGGCTCCGCTCTaGTTTTGTCCTGGGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QALPHPIQSYEPQESQLGGVAPL*FCPGRE Trigger: TTCCCTCCCAGGACAAAACCAGAGCGGAGCCACCCC...TCCCAGCTGACTCTCCTGTGGCTCATAGGACTGAATGGGGTGAGGAAGAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | CCTCACACACAGACACGTCACTGGGACCTGAAGAAGACGTCACCACCCACCACCCTCTCCCTGTGGCTCTaGACTGTCACCTCGAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PHTQTRHWDLKKTSPPTTLSLWL*TVTSSL Trigger: TAAGCTCGAGGTGACAGTGCAGAGCCACAGGGAGAG...GGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGTGTCTGTGTGTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | ACGTCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCAGCTCTGGTTTTGTCCTaGGAGGGAATGCCGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLGPEEDVTTHHHLWTAALVLS*EGMPLR Trigger: CCTCAGCGGCATTCCCTCCCAGGACAAAACCAGAGC...TGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR TCA 90 bp | CCTCACACACAGACACGTCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCAGGATGTGCTTCTaGAAGGGGAAGTCCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHTQTRHWDLKKTSPPTTIRMCF*KGKSSV Trigger: CACGGAGGACTTCCCCTTTCAGAAGCACATCCTGAT...GGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGTGTCTGTGTGTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR TCA 90 bp | ACGTCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCAATTCCTTGGGTGCAATaGTCCAGCTGTCCCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TSLGPEEDVTTHHHLWTAIPWVQ*SSCPSR Trigger: TCGGCTGGGACAGCTGGATCATTGCACCCAAGGAAT...TGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTCTTCCTCACCCCATTCAGTCCTATGAGCCACAGGAGAGTCAGCTGGGACCTTTGTGGGGAACTTaGGATGCACCAGGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QALPHPIQSYEPQESQLGPLWGT*DAPGSA Trigger: TGCAGACCCTGGTGCATCTCAAGTTCCCCACAAAGG...TCCCAGCTGACTCTCCTGTGGCTCATAGGACTGAATGGGGTGAGGAAGAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | GGTCACAGTGCACGTCAGAGGGCTGAGGTCCTGAACTGTCTCCCTTCTGTGGTTCCAGTCTGGTCTCCTTaGTCCCATTGCTGCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GHSARQRAEVLNCLPSVVPVWSP*SHCCGH Trigger: ATGACCGCAGCAATGGGACCAAGGAGACCAGACTGG...AACCACAGAAGGGAGACAGTTCAGGACCTCAGCCCTCTGACGTGCACTGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | CCTCACACACAGACACGTCACTGGGACCTGAAGAAGACGTCACCACCCACCACCTTCTCCAGGAACATCTaGAGGTCAAAGACACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PHTQTRHWDLKKTSPPTTFSRNI*RSKTPS Trigger: GGAGGGTGTCTTTGACCTGCAGATGTTCCTGGAGAA...GGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGTGTCTGTGTGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | CACCACCCACCACCATCTGTGGACAGCACTGCCATGCTACGCTGGCTGGCATGTCATCATAAACGACCATaGTTCCTTCCAGCCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: HHPPPSVDSTAMLRWLACHHKRP*FLPAHE Trigger: CTCATGGGCTGGAAGGAAGCATGGTCGTTTATGATG...ACATGCCAGCCAGCGTAGCATGGCAGTGCTGTCCACAGATGGTGGTGGGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | TATGTTGTCAGAATGAGTCTCAGCTTCCTAGACCCTGTGAGTCCCGTGCAGCTCTCTTCTGGCAGTGGCTaGTGGCTCCGGTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YVVRMSLSFLDPVSPVQLSSGSG*WLRCSS Trigger: AGAGGAGCACCGGAGCCAGCAGCCACTGCCAGAAGA...GAGCTGCACGGGACTCACAGGGTCTAGGAAGCTGAGACTCATTCTGACAACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | TATGTTGTCAGAATGAGTCTCAGCTTCCTAGACCCTGTGAGTCCCGTGCAGCTCAGGTCTTGGTCCCCGTaGCCTGGTCCCAAGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YVVRMSLSFLDPVSPVQLRSWSP*PGPKSH Trigger: GTGAGACTTGGGACCAGGCCACGGGGACCAAGACCT...GAGCTGCACGGGACTCACAGGGTCTAGGAAGCTGAGACTCATTCTGACAACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | ACGTCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCAGCACGATGGCATGTTTaGTGGGTGTCACGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSLGPEEDVTTHHHLWTAARWHV*WVSRHQ Trigger: CTGATGACGTGACACCCACCAAACATGCCATCGTGC...TGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGTCATTGTCACTTCAGCAGAGGGACCCACCAGACACAAGAAGGGCAACTTGGGACTCAGTTTGGTaGGAACGCAGCAGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSLQQRDPPDTRRATWDSVW*ERSRLC Trigger: GCAAAGCCTGCTGCGTTCCCACCAAACTGAGTCCCA...AGTTGCCCTTCTTGTGTCTGGTGGGTCCCTCTGCTGAAGTGACAATGACTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | CCTCACACACAGACACGTCACTGGGACCTGAAGAAGACGTCACCACCCACCACCCTCTTGGCTCTCACCTaGCACCTGGTAAGCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHTQTRHWDLKKTSPPTTLLALT*HLVSIF Trigger: AAAAATGCTTACCAGGTGGCAGGTGAGAGCCAAGAG...GGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGTGTCTGTGTGTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGTCATTGTCACTTCAGCAGAGGGACCCACCAGACACAAGAAGGGCAACTGATCATGTACTGGGGTaGCTCCGCTCTGGTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSLQQRDPPDTRRATDHVLG*LRSGFV Trigger: GACAAAACCAGAGCGGAGCCACCCCAGTACATGATC...AGTTGCCCTTCTTGTGTCTGGTGGGTCCCTCTGCTGAAGTGACAATGACTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | GACACACTCCCAAGGAAGAACAAGTCGGTGGGGATGATGAGGAAGCAGAGTTCTCTGAGAGAAGTCTTCTaGCAGTGGCTGCTGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DTLPRKNKSVGMMRKQSSLREVF*QWLLAP Trigger: CGGAGCCAGCAGCCACTGCCAGAAGACTTCTCTCAG...AGAACTCTGCTTCCTCATCATCCCCACCGACTTGTTCTTCCTTGGGAGTGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGTCATTGTCACTTCAGCAGAGGGACCCACCAGACACAAGAAGGGCAACTGTGGTACTTGAGGGTTaGCACCCCCATGTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSLQQRDPPDTRRATVVLEG*HPHVIL Trigger: AAGGATGACATGGGGGTGCCAACCCTCAAGTACCAC...AGTTGCCCTTCTTGTGTCTGGTGGGTCCCTCTGCTGAAGTGACAATGACTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR TCA 90 bp | ACGTCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCATCGGGATGGAGATGTTaGAGATCAGGATGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSLGPEEDVTTHHHLWTASGWRC*RSGCAS Trigger: AGAAGCACATCCTGATCTTCAACATCTCCATCCCGA...TGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCTAGTTTCTGCCTGGTTTCCTGCCGTTCCCAGATCATCTACCCACAGCTTGAACGCAGCAGGCTTTaGCCACCTTTGTGGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SASFCLVSCRSQIIYPQLERSRL*PPLWGT Trigger: AGTTCCCCACAAAGGTGGGCAAAGCCTGCTGCGTTC...AAGCTGTGGGTAGATGATCTGGGAACGGCAGGAAACCAGGCAGAAACTAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAGTCATTGTCACTTCAGCAGAGGGACCCACCAGACACAAGAAGGGCAACTGTCATATTCCTTGGGTaGAATGATCCAGCTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSLQQRDPPDTRRATVIFLG*NDPAVP Trigger: TGGGACAGCTGGATCATTGCACCCAAGGAATATGAC...AGTTGCCCTTCTTGTGTCTGGTGGGTCCCTCTGCTGAAGTGACAATGACTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCTAGTTTCTGCCTGGTTTCCTGCCGTTCCCAGATCATCTACCCACAGCTTAGATGCACCAGGGTCTaGACGATGGCATGTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SASFCLVSCRSQIIYPQLRCTRV*TMACLV Trigger: CACCAAACATGCCATCGTGCAGACCCTGGTGCATCT...AAGCTGTGGGTAGATGATCTGGGAACGGCAGGAAACCAGGCAGAAACTAGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTGACATCTTTCTACCCACTAACCCTTCCAGGGTCTCCTGCTCTGCCCCTTCAGCTCCAGTCTaGTCTCCTTGGTCCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFDIFLPTNPSRVSCSAPSAPV*SPWSHC Trigger: GCAATGGGACCAAGGAGACCAGACTGGAGCTGAAGG...GGCAGAGCAGGAGACCCTGGAAGGGTTAGTGGGTAGAAAGATGTCAAAAAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | CCACCAGACACAAGAAGGGCAACTAACTCCTTTTCTTCTCAAGGATGGTTTCTGTCACAGCTCTCCCTGTaGCTCTGCACTGTCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPDTRRATNSFSSQGWFLSQLSL*LCTVTS Trigger: CGAGGTGACAGTGCAGAGCCACAGGGAGAGCTGTGA...CAGAAACCATCCTTGAGAAGAAAAGGAGTTAGTTGCCCTTCTTGTGTCTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | GACACACTCCCAAGGAAGAACAAGTCGGTGGGGATGATGAGGAAGCAGAGTTCTCACGTCATCAGCCAATaGGAAGAAGCAACCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DTLPRKNKSVGMMRKQSSHVISQ*EEATPF Trigger: AAAGGGGGTTGCTTCTTCCCATTGGCTGATGACGTG...AGAACTCTGCTTCCTCATCATCCCCACCGACTTGTTCTTCCTTGGGAGTGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGTTCACTCCTTCCTTCACACCTTATGTTGTCAGAATGAGTCTCAGCTTGTGGGGAACTTGAGATaGACCAGGGTCTGCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: AGVHSFLHTLCCQNESQLVGNLR*TRVCTM Trigger: CATCGTGCAGACCCTGGTGCATCTCAAGTTCCCCAC...AAGCTGAGACTCATTCTGACAACATAAGGTGTGAAGGAAGGAGTGAACTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTTCACACCTTATGTTGTCAGAATGAGTCTCAGCTTCCTAGACCCTGTGCGATGGCATGTTTGGTaGGTGTCACGTCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSFTPYVVRMSLSFLDPVRWHVW*VSRHQP Trigger: TGGCTGATGACGTGACACCCACCAAACATGCCATCG...CACAGGGTCTAGGAAGCTGAGACTCATTCTGACAACATAAGGTGTGAAGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | TATGTTGTCAGAATGAGTCTCAGCTTCCTAGACCCTGTGAGTCCCGTGCAGCTCTGTAGAGGATGGAGATaGGACTCAGTTTGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YVVRMSLSFLDPVSPVQLCRGWR*DSVWWE Trigger: TTCCCACCAAACTGAGTCCCATCTCCATCCTCTACA...GAGCTGCACGGGACTCACAGGGTCTAGGAAGCTGAGACTCATTCTGACAACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCTTCACACCTTATGTTGTCAGAATGAGTCTCAGCTTCCTAGACCCTGTGTCTCCTTGGTCCCATTaGTGCGGTCATTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSFTPYVVRMSLSFLDPVSPWSH*CGHWRR Trigger: TCTTCTCCAATGACCGCAGCAATGGGACCAAGGAGA...CACAGGGTCTAGGAAGCTGAGACTCATTCTGACAACATAAGGTGTGAAGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | GACACACTCCCAAGGAAGAACAAGTCGGTGGGGATGATGAGGAAGCAGAGTTCTCATTGCTGCGGTCATTaGAGAAGACAACAAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTLPRKNKSVGMMRKQSSHCCGH*RRQQRR Trigger: CCTTCTTTGTTGTCTTCTCCAATGACCGCAGCAATG...AGAACTCTGCTTCCTCATCATCCCCACCGACTTGTTCTTCCTTGGGAGTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | CCACCAGACACAAGAAGGGCAACTAACTCCTTTTCTTCTCAAGGATGGTTTCTGCCTTGGTCCCATTGCTaGGGTCATTGGAGAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PPDTRRATNSFSSQGWFLPWSHC*GHWRRQ Trigger: TTGTCTTCTCCAATGACCGCAGCAATGGGACCAAGG...CAGAAACCATCCTTGAGAAGAAAAGGAGTTAGTTGCCCTTCTTGTGTCTGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGTTCACTCCTTCCTTCACACCTTATGTTGTCAGAATGAGTCTCAGCTTCTTCCAGCCCATGAGTaGAGTCCACATCATTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGVHSFLHTLCCQNESQLLPAHE*SPHHFG Trigger: GCCAAAATGATGTGGACTCCACTCATGGGCTGGAAG...AAGCTGAGACTCATTCTGACAACATAAGGTGTGAAGGAAGGAGTGAACTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | GCATGTTTTAGGGATTTATCTTTTCTCCAGCTCTACCAACTAAACACCAATGCTGAAGTCTTCTGGCAGTaGCTGCTGGCTCCGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ACFRDLSFLQLYQLNTNAEVFWQ*LLAPVL Trigger: GAGCACCGGAGCCAGCAGCCACTGCCAGAAGACTTC...AGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAAAGATAAATCCCTAAAACATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR TCA 90 bp | TTATCTTTTCTCCAGCTCTACCAACTAAACACCAATGCTCCATTGTATTTTGTGCCTCATAGTGGTACTTaGGGGTTGGCACCCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQLYQLNTNAPLYFVPHSGT*GLAPPC Trigger: ACATGGGGGTGCCAACCCTCAAGTACCACTATGAGG...CACAAAATACAATGGAGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAAAGATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR GCA 90 bp | TTATCTTTTCTCCAGCTCTACCAACTAAACACCAATGCTCCATTGTATTTTGTGTTCTGCAGCGGCTTCTaGTGTGTGACACAGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFLQLYQLNTNAPLYFVFCSGF*CVTQTS Trigger: GCTGGTCTGTGTCACACAGCAGAAGCCGCTGCAGAA...CACAAAATACAATGGAGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAAAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTCCAGCTCTACCAACTAAACACCAATGCTCCATTGTATTTTGTGTTAAAGCCTCAAAGTTCACCCTaGGAGAAGTCTTCTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLQLYQLNTNAPLYFVLKPQSSP*EKSSGS Trigger: ACTGCCAGAAGACTTCTCTCAGGGTGAACTTTGAGG...CTTTAACACAAAATACAATGGAGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCCAGCTCTACCAACTAAACACCAATGCTCCATTGTATTTTGTGTTAAAGCAGGTTTTTGGAACCTaGAGGGACACTGATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLQLYQLNTNAPLYFVLKQVFGT*RDTDVQ Trigger: CTGGACATCAGTGTCCCTCCAGGTTCCAAAAACCTG...CTTTAACACAAAATACAATGGAGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CCA 90 bp | GCATGTTTTAGGGATTTATCTTTTCTCCAGCTCTACCAACTAAACACCAATGCTCCTGGTAAGCATTTTTaGCTGTCTTCACAAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ACFRDLSFLQLYQLNTNAPGKHF*LSSQAW Trigger: CCATGCTTGTGAAGACAGCCAAAAATGCTTACCAGG...AGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAAAGATAAATCCCTAAAACATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| 3UTR CAA 72 bp | TTTCTCCAGCTCTACCAACTAAACACCAATGCTCCATaGTATTTTGTGTTAAAGTTGGTCATTGTTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: FLQLYQLNTNAP*YFVLKLVIVTW Trigger: CCATGTAACAATGACCAACTTTAACACAAAATACAATGGAGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS TCA 90 bp | CCCCAGGGGATGCTTGTTCCCAGTTCTGCAGCGGCTTCTGCTGTGTaGCACAGACCAGCAGGAACAGCGGGAGCAGGGCCACCCGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQGMLVPSSAAASAV*HRPAGTAGAGPPGR Trigger: CCTTCCGGGTGGCCCTGCTCCCGCTGTTCCTGCTGGTCTGTGTCACACAGCAGAAGCCGCTGCAGAACTGGGAACAAGCATCCCCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | TCACTGGGACCTGAAGAAGACGTCACCACCCACCACCATCTGTGGACAGCACTGGATACCAAGAAGGTCTaGGTCCCCGTGGCCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGPEEDVTTHHHLWTALDTKKV*VPVAWS Trigger: GGACCAGGCCACGGGGACCAAGACCTTCTTGGTATC...CAGTGCTGTCCACAGATGGTGGTGGGTGGTGACGTCTTCTTCAGGTCCCAGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | GGTCACAGTGCACGTCAGAGGGCTGAGGTCCTGAACTGTCTCCCTTCTGTGGTTAAGCTCCGCACGATGTaGGAGGCAGGCGTAGACGAT | + |
|
Preference number: 5 (lower is better) Translates to: GHSARQRAEVLNCLPSVVKLRTM*EAGVDD Trigger: ATCGTCTACGCCTGCCTCCAACATCGTGCGGAGCTT...AACCACAGAAGGGAGACAGTTCAGGACCTCAGCCCTCTGACGTGCACTGTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS GCA 90 bp | CAGGCTTTGCCCACCTTTGTGGGGAACTTGAGATGCACCAGGGTCTaGACGATGGCATGTTTGGTGGGTGTCACGTCATCAGCCAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QALPTFVGNLRCTRV*TMACLVGVTSSANG Trigger: CCCATTGGCTGATGACGTGACACCCACCAAACATGCCATCGTGCAGACCCTGGTGCATCTCAAGTTCCCCACAAAGGTGGGCAAAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | TCTCCCATCCTTCGTCCCGAATGTCCTGGGATACCAAGAAGGTCTTaGTCCCCGTGGCCTGGTCCCAAGTCTCACTGTCCTCCAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SPILRPECPGIPRRS*SPWPGPKSHCPPEH Trigger: ATGTTCTGGAGGACAGTGAGACTTGGGACCAGGCCACGGGGACCAAGACCTTCTTGGTATCCCAGGACATTCGGGACGAAGGATGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | CTGTCCCAGCCGATGTCCTCAAAGTTCACCCTGAGAGAAGTCTTCTaGCAGTGGCTGCTGGCTCCGGTGCTCCTCTTCCTTCTAGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSQPMSSKFTLREVF*QWLLAPVLLFLLAK Trigger: TTTAGCTAGAAGGAAGAGGAGCACCGGAGCCAGCAGCCACTGCCAGAAGACTTCTCTCAGGGTGAACTTTGAGGACATCGGCTGGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | CCCACACTCAGCCACACTCATCCCCTCATAGTGGTACTTGAGGGTTaGCACCCCCATGTCATCCTTGTAGAGGATGGAGATGGGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PTLSHTHPLIVVLEG*HPHVILVEDGDGTQ Trigger: CTGAGTCCCATCTCCATCCTCTACAAGGATGACATGGGGGTGCCAACCCTCAAGTACCACTATGAGGGGATGAGTGTGGCTGAGTGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | CTTCGTCCCGAATGTCCTGGGATACCAAGAAGGTCTTGGTCCCCGTaGCCTGGTCCCAAGTCTCACTGTCCTCCAGAACATCATAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: LRPECPGIPRRSWSP*PGPKSHCPPEHHKR Trigger: TCGTTTATGATGTTCTGGAGGACAGTGAGACTTGGGACCAGGCCACGGGGACCAAGACCTTCTTGGTATCCCAGGACATTCGGGACGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | CCTGCTCATGGCCGATCATCTCCTTCAGCTCCAGTCTGGTCTCCTTaGTCCCATTGCTGCGGTCATTGGAGAAGACAACAAAGAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PAHGRSSPSAPVWSP*SHCCGHWRRQQRRA Trigger: TGCCCTTCTTTGTTGTCTTCTCCAATGACCGCAGCAATGGGACCAAGGAGACCAGACTGGAGCTGAAGGAGATGATCGGCCATGAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | GCATGGTCTCCTGCTCATGGCCGATCATCTCCTTCAGCTCCAGTCTaGTCTCCTTGGTCCCATTGCTGCGGTCATTGGAGAAGACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: AWSPAHGRSSPSAPV*SPWSHCCGHWRRQQ Trigger: TTGTTGTCTTCTCCAATGACCGCAGCAATGGGACCAAGGAGACCAGACTGGAGCTGAAGGAGATGATCGGCCATGAGCAGGAGACCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | CAGCCGATGTCCTCAAAGTTCACCCTGAGAGAAGTCTTCTGGCAGTaGCTGCTGGCTCCGGTGCTCCTCTTCCTTCTAGCTAAAAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QPMSSKFTLREVFWQ*LLAPVLLFLLAKSG Trigger: ACCACTTTTAGCTAGAAGGAAGAGGAGCACCGGAGCCAGCAGCCACTGCCAGAAGACTTCTCTCAGGGTGAACTTTGAGGACATCGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS GCA 90 bp | GGAGGGACACTGATGTCCAGTGTGTCACAGCTCTCCCTGTGGCTCTaGACTGTCACCTCGAGCTTATTTTTGTTTGTTGTGGAGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGTLMSSVSQLSLWL*TVTSSLFLFVVESA Trigger: GGCAGACTCCACAACAAACAAAAATAAGCTCGAGGTGACAGTGCAGAGCCACAGGGAGAGCTGTGACACACTGGACATCAGTGTCCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | GACGATTTGTCCGTTGTGTATCTGTTGTACAAGTCGATCATGTACTaGGGTGGCTCCGCTCTGGTTTTGTCCTGGGAGGGAATGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DDLSVVYLLYKSIMY*GGSALVLSWEGMPL Trigger: CAGCGGCATTCCCTCCCAGGACAAAACCAGAGCGGAGCCACCCCAGTACATGATCGACTTGTACAACAGATACACAACGGACAAATCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAGTCATTGTCACTTCAGCAGAGGGACCCACCAGACACAAGAAGGGCAACTGGAGTCCACATCATTTaGGCAGGAGACATAGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PQSLSLQQRDPPDTRRATGVHII*AGDIES Trigger: CGACTCTATGTCTCCTGCCAAAATGATGTGGACTCC...AGTTGCCCTTCTTGTGTCTGGTGGGTCCCTCTGCTGAAGTGACAATGACTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | GACACACTCCCAAGGAAGAACAAGTCGGTGGGGATGATGAGGAAGCAGAGTTCTACCTTTGTGGGGAACTaGAGATGCACCAGGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DTLPRKNKSVGMMRKQSSTFVGN*RCTRVC Trigger: GCAGACCCTGGTGCATCTCAAGTTCCCCACAAAGGT...AGAACTCTGCTTCCTCATCATCCCCACCGACTTGTTCTTCCTTGGGAGTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | TTTGTCCGTTGTGTATCTGTTGTACAAGTCGATCATGTACTGGGGTaGCTCCGCTCTGGTTTTGTCCTGGGAGGGAATGCCGCTGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FVRCVSVVQVDHVLG*LRSGFVLGGNAAEV Trigger: AACCTCAGCGGCATTCCCTCCCAGGACAAAACCAGAGCGGAGCCACCCCAGTACATGATCGACTTGTACAACAGATACACAACGGACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | GAACCTGGAGGGACACTGATGTCCAGTGTGTCACAGCTCTCCCTGTaGCTCTGCACTGTCACCTCGAGCTTATTTTTGTTTGTTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EPGGTLMSSVSQLSL*LCTVTSSLFLFVVE Trigger: CTCCACAACAAACAAAAATAAGCTCGAGGTGACAGTGCAGAGCCACAGGGAGAGCTGTGACACACTGGACATCAGTGTCCCTCCAGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGTTCACTCCTTCCTTCACACCTTATGTTGTCAGAATGAGTCTCAGCTTTTCCCCAGGGGATGCTaGTTCCCAGTTCTGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGVHSFLHTLCCQNESQLFPRGC*FPVLQR Trigger: CCGCTGCAGAACTGGGAACAAGCATCCCCTGGGGAA...AAGCTGAGACTCATTCTGACAACATAAGGTGTGAAGGAAGGAGTGAACTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCTTCCTCACCCCATTCAGTCCTATGAGCCACAGGAGAGTCAGCTGGGAACCTCGAGCTTATTTTaGTTTGTTGTGGAGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QALPHPIQSYEPQESQLGTSSLF*FVVESA Trigger: GGCAGACTCCACAACAAACAAAAATAAGCTCGAGGT...TCCCAGCTGACTCTCCTGTGGCTCATAGGACTGAATGGGGTGAGGAAGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGTTCACTCCTTCCTTCACACCTTATGTTGTCAGAATGAGTCTCAGCTTGGAACGCAGCAGGCTTaGCCCACCTTTGTGGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGVHSFLHTLCCQNESQLGTQQA*PTFVGN Trigger: GTTCCCCACAAAGGTGGGCAAAGCCTGCTGCGTTCC...AAGCTGAGACTCATTCTGACAACATAAGGTGTGAAGGAAGGAGTGAACTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS TCA 90 bp | GCACTGTCACCTCGAGCTTATTTTTGTTTGTTGTGGAGTCTGCCCTaGCCCACCGCTTCACGGCACTCGATACTTCTAAAGTCTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ALSPRAYFCLLWSLP*PTASRHSILLKSPI Trigger: GATGGGAGACTTTAGAAGTATCGAGTGCCGTGAAGCGGTGGGTCAGGGCAGACTCCACAACAAACAAAAATAAGCTCGAGGTGACAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS GCA 90 bp | GAAGAAGCAACCCCCTTTACACTCATAGGCGTCATATTCCTTGGGTaGAATGATCCAGCTGTCCCAGCCGATGTCCTCAAAGTTCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: EEATPFTLIGVIFLG*NDPAVPADVLKVHP Trigger: AGGGTGAACTTTGAGGACATCGGCTGGGACAGCTGGATCATTGCACCCAAGGAATATGACGCCTATGAGTGTAAAGGGGGTTGCTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | CCTCCAGAACATCATAAACGACCATGCTTCCTTCCAGCCCATGAGTaGAGTCCACATCATTTTGGCAGGAGACATAGAGTCGGAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPEHHKRPCFLPAHE*SPHHFGRRHRVGAQ Trigger: CTGAGCTCCGACTCTATGTCTCCTGCCAAAATGATGTGGACTCCACTCATGGGCTGGAAGGAAGCATGGTCGTTTATGATGTTCTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 90 bp | GGTCTGCACGATGGCATGTTTGGTGGGTGTCACGTCATCAGCCAATaGGAAGAAGCAACCCCCTTTACACTCATAGGCGTCATATTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GLHDGMFGGCHVISQ*EEATPFTLIGVIFL Trigger: AAGGAATATGACGCCTATGAGTGTAAAGGGGGTTGCTTCTTCCCATTGGCTGATGACGTGACACCCACCAAACATGCCATCGTGCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCTAGTTTCTGCCTGGTTTCCTGCCGTTCCCAGATCATCTACCCACAGCTTCTCGGGATGGAGATGTaGAAGATCAGGATGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SASFCLVSCRSQIIYPQLLGMEM*KIRMCF Trigger: GAAGCACATCCTGATCTTCAACATCTCCATCCCGAG...AAGCTGTGGGTAGATGATCTGGGAACGGCAGGAAACCAGGCAGAAACTAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGTTCACTCCTTCCTTCACACCTTATGTTGTCAGAATGAGTCTCAGCTTTCCAGTCTGGTCTCCTaGGTCCCATTGCTGCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGVHSFLHTLCCQNESQLSSLVS*VPLLRS Trigger: TGACCGCAGCAATGGGACCAAGGAGACCAGACTGGA...AAGCTGAGACTCATTCTGACAACATAAGGTGTGAAGGAAGGAGTGAACTCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | CCACCAGACACAAGAAGGGCAACTAACTCCTTTTCTTCTCAAGGATGGTTTCTGGAGATGGGACTCAGTTaGGTGGGAACGCAGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPDTRRATNSFSSQGWFLEMGLS*VGTQQA Trigger: AGCCTGCTGCGTTCCCACCAAACTGAGTCCCATCTC...CAGAAACCATCCTTGAGAAGAAAAGGAGTTAGTTGCCCTTCTTGTGTCTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGTTCACTCCTTCCTTCACACCTTATGTTGTCAGAATGAGTCTCAGCTTGTCTCCTTGGTCCCATaGCTGCGGTCATTGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGVHSFLHTLCCQNESQLVSLVP*LRSLEK Trigger: CTTCTCCAATGACCGCAGCAATGGGACCAAGGAGAC...AAGCTGAGACTCATTCTGACAACATAAGGTGTGAAGGAAGGAGTGAACTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS-3UTR CAA 90 bp | TTATCTTTTCTCCAGCTCTACCAACTAAACACCAATGCTCCATTGTATTTTGTGCCATTGCTGCGGTCATaGGAGAAGACAACAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSFLQLYQLNTNAPLYFVPLLRS*EKTTKK Trigger: CTTCTTTGTTGTCTTCTCCAATGACCGCAGCAATGG...CACAAAATACAATGGAGCATTGGTGTTTAGTTGGTAGAGCTGGAGAAAAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS GCA 72 bp | CCAGGGGATGCTTGTTCCCAGTTCTGCAGCGGCTTCTaGTGTGTGACACAGACCAGCAGGAACAGCGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGDACSQFCSGF*CVTQTSRNSGS Trigger: GCTCCCGCTGTTCCTGCTGGTCTGTGTCACACAGCAGAAGCCGCTGCAGAACTGGGAACAAGCATCCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS TCA 72 bp | TCCAGCTGTCCCAGCCGATGTCCTCAAAGTTCACCCTaGGAGAAGTCTTCTGGCAGTGGCTGCTGGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SSCPSRCPQSSP*EKSSGSGCWLR Trigger: CCGGAGCCAGCAGCCACTGCCAGAAGACTTCTCTCAGGGTGAACTTTGAGGACATCGGCTGGGACAGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CAA 72 bp | CCTTCGTCCCGAATGTCCTGGGATACCAAGAAGGTCTaGGTCCCCGTGGCCTGGTCCCAAGTCTCACTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSSRMSWDTKKV*VPVAWSQVSLS Trigger: GGACAGTGAGACTTGGGACCAGGCCACGGGGACCAAGACCTTCTTGGTATCCCAGGACATTCGGGACGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CAA 90 bp | GTCTCCCATCCTTCGTCCCGAATGTCCTGGGATACCAAGAAGGTCTaGGTCCCCGTGGCCTGGTCCCAAGTCTCACTGTCCTCCAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: VSHPSSRMSWDTKKV*VPVAWSQVSLSSRT Trigger: TGTTCTGGAGGACAGTGAGACTTGGGACCAGGCCACGGGGACCAAGACCTTCTTGGTATCCCAGGACATTCGGGACGAAGGATGGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 72 bp | CTTCGTCCCGAATGTCCTGGGATACCAAGAAGGTCTTaGTCCCCGTGGCCTGGTCCCAAGTCTCACTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRPECPGIPRRS*SPWPGPKSHCP Trigger: AGGACAGTGAGACTTGGGACCAGGCCACGGGGACCAAGACCTTCTTGGTATCCCAGGACATTCGGGACGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CAA 72 bp | AAGTCGATCATGTACTGGGGTGGCTCCGCTCTGGTTTaGTCCTGGGAGGGAATGCCGCTGAGGTTAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KSIMYWGGSALV*SWEGMPLRLRL Trigger: CAGCCTTAACCTCAGCGGCATTCCCTCCCAGGACAAAACCAGAGCGGAGCCACCCCAGTACATGATCGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS GCA 72 bp | CCCACCTTTGTGGGGAACTTGAGATGCACCAGGGTCTaGACGATGGCATGTTTGGTGGGTGTCACGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: PTFVGNLRCTRV*TMACLVGVTSS Trigger: TGATGACGTGACACCCACCAAACATGCCATCGTGCAGACCCTGGTGCATCTCAAGTTCCCCACAAAGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 72 bp | GAATGTCCTGGGATACCAAGAAGGTCTTGGTCCCCGTaGCCTGGTCCCAAGTCTCACTGTCCTCCAGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: ECPGIPRRSWSP*PGPKSHCPPEH Trigger: ATGTTCTGGAGGACAGTGAGACTTGGGACCAGGCCACGGGGACCAAGACCTTCTTGGTATCCCAGGACATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 72 bp | TCCTCAAAGTTCACCCTGAGAGAAGTCTTCTGGCAGTaGCTGCTGGCTCCGGTGCTCCTCTTCCTTCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSKFTLREVFWQ*LLAPVLLFLLA Trigger: AGCTAGAAGGAAGAGGAGCACCGGAGCCAGCAGCCACTGCCAGAAGACTTCTCTCAGGGTGAACTTTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CAA 90 bp | CTGTTGTACAAGTCGATCATGTACTGGGGTGGCTCCGCTCTGGTTTaGTCCTGGGAGGGAATGCCGCTGAGGTTAAGGCTGCGTAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLYKSIMYWGGSALV*SWEGMPLRLRLRRK Trigger: TTTCCTACGCAGCCTTAACCTCAGCGGCATTCCCTCCCAGGACAAAACCAGAGCGGAGCCACCCCAGTACATGATCGACTTGTACAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CAA 90 bp | AACGACCATGCTTCCTTCCAGCCCATGAGTGGAGTCCACATCATTTaGGCAGGAGACATAGAGTCGGAGCTCAGCCCTGGTGATCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NDHASFQPMSGVHII*AGDIESELSPGDLL Trigger: GAGCAGATCACCAGGGCTGAGCTCCGACTCTATGTCTCCTGCCAAAATGATGTGGACTCCACTCATGGGCTGGAAGGAAGCATGGTCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS GCA 72 bp | CCTTCAGCTCCAGTCTGGTCTCCTTGGTCCCATTGCTaGGGTCATTGGAGAAGACAACAAAGAAGGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSAPVWSPWSHC*GHWRRQQRRAG Trigger: ACCTGCCCTTCTTTGTTGTCTTCTCCAATGACCGCAGCAATGGGACCAAGGAGACCAGACTGGAGCTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 72 bp | CCTCTTGGCTCTCACCTGCCACCTGGTAAGCATTTTTaGCTGTCTTCACAAGCATGGTCTCCTGCTCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLGSHLPPGKHF*LSSQAWSPAHG Trigger: GCCATGAGCAGGAGACCATGCTTGTGAAGACAGCCAAAAATGCTTACCAGGTGGCAGGTGAGAGCCAAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CAA 72 bp | TCCCTGTGGCTCTGCACTGTCACCTCGAGCTTATTTTaGTTTGTTGTGGAGTCTGCCCTGACCCACCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLWLCTVTSSLF*FVVESALTHRF Trigger: GAAGCGGTGGGTCAGGGCAGACTCCACAACAAACAAAAATAAGCTCGAGGTGACAGTGCAGAGCCACAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 72 bp | TGTGTATCTGTTGTACAAGTCGATCATGTACTGGGGTaGCTCCGCTCTGGTTTTGTCCTGGGAGGGAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: CVSVVQVDHVLG*LRSGFVLGGNA Trigger: GGCATTCCCTCCCAGGACAAAACCAGAGCGGAGCCACCCCAGTACATGATCGACTTGTACAACAGATACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 72 bp | TTTTTGGCTGTCTTCACAAGCATGGTCTCCTGCTCATaGCCGATCATCTCCTTCAGCTCCAGTCTGGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLAVFTSMVSCS*PIISFSSSLVS Trigger: GGAGACCAGACTGGAGCTGAAGGAGATGATCGGCCATGAGCAGGAGACCATGCTTGTGAAGACAGCCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 72 bp | GATGGCATGTTTGGTGGGTGTCACGTCATCAGCCAATaGGAAGAAGCAACCCCCTTTACACTCATAGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: DGMFGGCHVISQ*EEATPFTLIGV Trigger: GACGCCTATGAGTGTAAAGGGGGTTGCTTCTTCCCATTGGCTGATGACGTGACACCCACCAAACATGCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CCA 72 bp | AGCCACACTCATCCCCTCATAGTGGTACTTGAGGGTTaGCACCCCCATGTCATCCTTGTAGAGGATGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SHTHPLIVVLEG*HPHVILVEDGD Trigger: ATCTCCATCCTCTACAAGGATGACATGGGGGTGCCAACCCTCAAGTACCACTATGAGGGGATGAGTGTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CAA 72 bp | GAGGCAGGCGTAGACGATTTGTCCGTTGTGTATCTGTaGTACAAGTCGATCATGTACTGGGGTGGCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: EAGVDDLSVVYL*YKSIMYWGGSA Trigger: AGCGGAGCCACCCCAGTACATGATCGACTTGTACAACAGATACACAACGGACAAATCGTCTACGCCTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CAA 90 bp | TCCACGCTGAAGCTCCGCACGATGTTGGAGGCAGGCGTAGACGATTaGTCCGTTGTGTATCTGTTGTACAAGTCGATCATGTACTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: STLKLRTMLEAGVDD*SVVYLLYKSIMYWG Trigger: ACCCCAGTACATGATCGACTTGTACAACAGATACACAACGGACAAATCGTCTACGCCTGCCTCCAACATCGTGCGGAGCTTCAGCGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
||
| CDS CAA 90 bp | GCAGCTGTCGATATAGCATCTTCCACGCTGAAGCTCCGCACGATGTaGGAGGCAGGCGTAGACGATTTGTCCGTTGTGTATCTGTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AAVDIASSTLKLRTM*EAGVDDLSVVYLLY Trigger: GTACAACAGATACACAACGGACAAATCGTCTACGCCTGCCTCCAACATCGTGCGGAGCTTCAGCGTGGAAGATGCTATATCGACAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS CAA 90 bp | CCATTGCTGCGGTCATTGGAGAAGACAACAAAGAAGGGCAGGTTTTaGGAACCTGGAGGGACACTGATGTCCAGTGTGTCACAGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PLLRSLEKTTKKGRF*EPGGTLMSSVSQLS Trigger: GGAGAGCTGTGACACACTGGACATCAGTGTCCCTCCAGGTTCCAAAAACCTGCCCTTCTTTGTTGTCTTCTCCAATGACCGCAGCAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS CAA 90 bp | ACGATGTTGGAGGCAGGCGTAGACGATTTGTCCGTTGTGTATCTGTaGTACAAGTCGATCATGTACTGGGGTGGCTCCGCTCTGGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: TMLEAGVDDLSVVYL*YKSIMYWGGSALVL Trigger: CAAAACCAGAGCGGAGCCACCCCAGTACATGATCGACTTGTACAACAGATACACAACGGACAAATCGTCTACGCCTGCCTCCAACATCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS GCA 72 bp | TGTCACCTCGAGCTTATTTTTGTTTGTTGTGGAGTCTaGCCTGACCCACCGCTTCACGGCACTCGATACTTC | + |
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Preference number: 6 (lower is better) Translates to: CHLELIFVCCGV*PDPPLHGTRYF Trigger: GAAGTATCGAGTGCCGTGAAGCGGTGGGTCAGGGCAGACTCCACAACAAACAAAAATAAGCTCGAGGTGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS GCA 72 bp | ACCCCCTTTACACTCATAGGCGTCATATTCCTTGGGTaGAATGATCCAGCTGTCCCAGCCGATGTCCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: TPFTLIGVIFLG*NDPAVPADVLK Trigger: TTTGAGGACATCGGCTGGGACAGCTGGATCATTGCACCCAAGGAATATGACGCCTATGAGTGTAAAGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS CCA 72 bp | CCACCTGGTAAGCATTTTTGGCTGTCTTCACAAGCATaGTCTCCTGCTCATGGCCGATCATCTCCTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PPGKHFWLSSQA*SPAHGRSSPSA Trigger: AGCTGAAGGAGATGATCGGCCATGAGCAGGAGACCATGCTTGTGAAGACAGCCAAAAATGCTTACCAGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS CAA 72 bp | GATATAGCATCTTCCACGCTGAAGCTCCGCACGATGTaGGAGGCAGGCGTAGACGATTTGTCCGTTGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: DIASSTLKLRTM*EAGVDDLSVVY Trigger: ATACACAACGGACAAATCGTCTACGCCTGCCTCCAACATCGTGCGGAGCTTCAGCGTGGAAGATGCTATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS TCA 72 bp | CCTCGAGCTTATTTTTGTTTGTTGTGGAGTCTGCCCTaGCCCACCGCTTCACGGCACTCGATACTTCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: PRAYFCLLWSLP*PTASRHSILLK Trigger: CTTTAGAAGTATCGAGTGCCGTGAAGCGGTGGGTCAGGGCAGACTCCACAACAAACAAAAATAAGCTCGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS CAA 72 bp | AAGCTCCGCACGATGTTGGAGGCAGGCGTAGACGATTaGTCCGTTGTGTATCTGTTGTACAAGTCGATCATG | + |
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Preference number: 6 (lower is better) Translates to: KLRTMLEAGVDD*SVVYLLYKSIM Trigger: CATGATCGACTTGTACAACAGATACACAACGGACAAATCGTCTACGCCTGCCTCCAACATCGTGCGGAGCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS CAA 72 bp | CGGTCATTGGAGAAGACAACAAAGAAGGGCAGGTTTTaGGAACCTGGAGGGACACTGATGTCCAGTGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: RSLEKTTKKGRF*EPGGTLMSSVS Trigger: TGACACACTGGACATCAGTGTCCCTCCAGGTTCCAAAAACCTGCCCTTCTTTGTTGTCTTCTCCAATGACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS TCA 72 bp | CTTTACACTCATAGGCGTCATATTCCTTGGGTGCAATaGTCCAGCTGTCCCAGCCGATGTCCTCAAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LYTHRRHIPWVQ*SSCPSRCPQSS Trigger: TGAACTTTGAGGACATCGGCTGGGACAGCTGGATCATTGCACCCAAGGAATATGACGCCTATGAGTGTAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS GCA 72 bp | AAGTCTCACTGTCCTCCAGAACATCATAAACGACCATaGTTCCTTCCAGCCCATGAGTGGAGTCCACATCAT | + |
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Preference number: 6 (lower is better) Translates to: KSHCPPEHHKRP*FLPAHEWSPHH Trigger: ATGATGTGGACTCCACTCATGGGCTGGAAGGAAGCATGGTCGTTTATGATGTTCTGGAGGACAGTGAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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| CDS CCA 72 bp | CATCATAAACGACCATGCTTCCTTCCAGCCCATGAGTaGAGTCCACATCATTTTGGCAGGAGACATAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: HHKRPCFLPAHE*SPHHFGRRHRV Trigger: GACTCTATGTCTCCTGCCAAAATGATGTGGACTCCACTCATGGGCTGGAAGGAAGCATGGTCGTTTATGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100720.2 |
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