Pregenerated sensors for GDE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033917Ensembl transcript IDs: ENSMUST00000038791.15, ENSMUST00000132509.4, ENSMUST00000207323.2, ENSMUST00000208040.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGCCTTCCTTGGAGCATGGTCACCATGCCTGGTTTCTGCTTGTTaGGGTGACACTGTGACTATTGCTAGTATGAGCCACAGGGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: GAFLGAWSPCLVSAC*GDTVTIASMSHRVP Trigger: GGGGACCCTGTGGCTCATACTAGCAATAGTCACAGTGTCACCCCAACAAGCAGAAACCAGGCATGGTGACCATGCTCCAAGGAAGGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR GCA 90 bp | AAATGTCAACTTGGAGTGATCATGCAAGCCCCATGCATTGGTGCCTaGGCCCTAATTGCAGGACCCACTCTGCTCATCCTCGTGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: KCQLGVIMQAPCIGA*ALIAGPTLLILVAL Trigger: CAGAGCCACGAGGATGAGCAGAGTGGGTCCTGCAATTAGGGCGCAGGCACCAATGCATGGGGCTTGCATGATCACTCCAAGTTGACATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR GCA 90 bp | TTTAAAATGTCAACTTGGAGTGATCATGCAAGCCCCATGCATTGGTaGCTGCGCCCTAATTGCAGGACCCACTCTGCTCATCCTCGTGGC | + |
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Preference number: 1 (lower is better) Translates to: FKMSTWSDHASPMHW*LRPNCRTHSAHPRG Trigger: GCCACGAGGATGAGCAGAGTGGGTCCTGCAATTAGGGCGCAGGCACCAATGCATGGGGCTTGCATGATCACTCCAAGTTGACATTTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR GCA 90 bp | CGGCAAGATTTAAAATGTCAACTTGGAGTGATCATGCAAGCCCCATaGATTGGTGCCTGCGCCCTAATTGCAGGACCCACTCTGCTCATC | + |
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Preference number: 1 (lower is better) Translates to: RQDLKCQLGVIMQAP*IGACALIAGPTLLI Trigger: GATGAGCAGAGTGGGTCCTGCAATTAGGGCGCAGGCACCAATGCATGGGGCTTGCATGATCACTCCAAGTTGACATTTTAAATCTTGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR CCA 90 bp | CAGATCCAGAATTTTAAGGGCAAGTGTGGAGCCTTCCTTGGAGCATaGTCACCATGCCTGGTTTCTGCTTGTTGGGGTGACACTGTGACT | + |
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Preference number: 1 (lower is better) Translates to: QIQNFKGKCGAFLGA*SPCLVSACWGDTVT Trigger: AGTCACAGTGTCACCCCAACAAGCAGAAACCAGGCATGGTGACCATGCTCCAAGGAAGGCTCCACACTTGCCCTTAAAATTCTGGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR CCA 90 bp | AGATTTAAAATGTCAACTTGGAGTGATCATGCAAGCCCCATGCATTaGTGCCTGCGCCCTAATTGCAGGACCCACTCTGCTCATCCTCGT | + |
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Preference number: 1 (lower is better) Translates to: RFKMSTWSDHASPMH*CLRPNCRTHSAHPR Trigger: ACGAGGATGAGCAGAGTGGGTCCTGCAATTAGGGCGCAGGCACCAATGCATGGGGCTTGCATGATCACTCCAAGTTGACATTTTAAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR CCA 90 bp | AATTCCGTGTATATATTCTTTAGAGCAGCAGAAGCCATATCTGCATaGCCTTTGACATCAAAGAAGATGGTGAGGTTATGGCGGAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: NSVYIFFRAAEAISA*PLTSKKMVRLWRRH Trigger: GTGCCTCCGCCATAACCTCACCATCTTCTTTGATGTCAAAGGCCATGCAGATATGGCTTCTGCTGCTCTAAAGAATATATACACGGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| 3UTR TCA 90 bp | TACAGGTCGCCATTAACAAAGCTGACGACAAATATTGGAAATAAGTaGATTACTGAAGTACGGCAAGATTTAAAATGTCAACTTGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: YRSPLTKLTTNIGNK*ITEVRQDLKCQLGV Trigger: CACTCCAAGTTGACATTTTAAATCTTGCCGTACTTCAGTAATTCACTTATTTCCAATATTTGTCGTCAGCTTTGTTAATGGCGACCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCAAGTGTGGAGCCTTCCTTGGAGCATGGTCACCATGCCTGGTTTCTGCTGTGTTCTCATGTCCCTaGAAGAGGCCTCCAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: KGKCGAFLGAWSPCLVSAVFSCP*KRPPGS Trigger: ACTGCCTGGAGGCCTCTTGCAGGGACATGAGAACAC...AGCAGAAACCAGGCATGGTGACCATGCTCCAAGGAAGGCTCCACACTTGCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR-3UTR GCA 90 bp | AGACGCTGTAGCGAGGCTTCCCATCTCCAGTGTGGCTCAGGCTCCAAGGCCTGTAGCAGAAGCCATATCTaGATGGCCTTTGACATCAAA | + |
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Preference number: 2 (lower is better) Translates to: RRCSEASHLQCGSGSKACSRSHI*MAFDIK Trigger: TTTGATGTCAAAGGCCATGCAGATATGGCTTCTGCT...ACAGGCCTTGGAGCCTGAGCCACACTGGAGATGGGAAGCCTCGCTACAGCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| 3UTR-3UTR GCA 90 bp | AAATGTCAACTTGGAGTGATCATGCAAGCCCCATGCATTGGTGCCTGCGCCCTAGCCACCCTGCCTTTTTaGAGATCCAGAATTTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: KCQLGVIMQAPCIGACALATLPF*RSRILR Trigger: CCTTAAAATTCTGGATCTGCAAAAAGGCAGGGTGGC...TAGGGCGCAGGCACCAATGCATGGGGCTTGCATGATCACTCCAAGTTGACATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR CAA 90 bp | GTGTATATATTCTTTAGAGCAGCAGAAGCCATATCTGCATGGCCTTaGACATCAAAGAAGATGGTGAGGTTATGGCGGAGGCACTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VYIFFRAAEAISAWP*TSKKMVRLWRRHSV Trigger: CACAGAGTGCCTCCGCCATAACCTCACCATCTTCTTTGATGTCAAAGGCCATGCAGATATGGCTTCTGCTGCTCTAAAGAATATATACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGAATGAGCAGACCATACTGTTATTGTACAGCTGTGGAAATTCCGTGTATGAGTCTGTGATTTGCTaGAGGGTTAAGTTTCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: GKNEQTILLLYSCGNSVYESVIC*RVKFPN Trigger: GTTAGGAAACTTAACCCTGCAGCAAATCACAGACTC...ATACACGGAATTTCCACAGCTGTACAATAACAGTATGGTCTGCTCATTCTTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCATCCTCGTGGCTCTGTACCCTCAGCGGGGTCAGGGTGGGGCCACCCTGCCAGTGTGGAGCCTTCCTaGGAGCATGGTCACCATGCC | + |
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Preference number: 3 (lower is better) Translates to: AHPRGSVPSAGSGWGHPASVEPS*EHGHHA Trigger: GGCATGGTGACCATGCTCCAAGGAAGGCTCCACACT...GGCAGGGTGGCCCCACCCTGACCCCGCTGAGGGTACAGAGCCACGAGGATGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR CCA 72 bp | CATCCTCGTGGCTCTGTACCCTCAGCGGGGTCAGGGTaGGGCCACCCTGCCTTTTTGCAGATCCAGAATTTT | + |
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Preference number: 3 (lower is better) Translates to: HPRGSVPSAGSG*GHPAFLQIQNF Trigger: AAAATTCTGGATCTGCAAAAAGGCAGGGTGGCCCCACCCTGACCCCGCTGAGGGTACAGAGCCACGAGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR GCA 72 bp | CCCAGGGCTTGTGCTAACAGAGTGTTCTCATGTCCCTaGAAGAGGCCTCCAGGCAGTTTCGCAACTGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: PRACANRVFSCP*KRPPGSFATVF Trigger: AAACACAGTTGCGAAACTGCCTGGAGGCCTCTTGCAGGGACATGAGAACACTCTGTTAGCACAAGCCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR CCA 72 bp | CTTGGAGCATGGTCACCATGCCTGGTTTCTGCTTGTTaGGGTGACACTGTGACTATTGCTAGTATGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LGAWSPCLVSAC*GDTVTIASMSH Trigger: GTGGCTCATACTAGCAATAGTCACAGTGTCACCCCAACAAGCAGAAACCAGGCATGGTGACCATGCTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR CCA 72 bp | AATTTTAAGGGCAAGTGTGGAGCCTTCCTTGGAGCATaGTCACCATGCCTGGTTTCTGCTTGTTGGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: NFKGKCGAFLGA*SPCLVSACWGD Trigger: GTCACCCCAACAAGCAGAAACCAGGCATGGTGACCATGCTCCAAGGAAGGCTCCACACTTGCCCTTAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR GCA 72 bp | TTAAAATGTCAACTTGGAGTGATCATGCAAGCCCCATaGATTGGTGCCTGCGCCCTAATTGCAGGACCCACT | + |
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Preference number: 3 (lower is better) Translates to: LKCQLGVIMQAP*IGACALIAGPT Trigger: AGTGGGTCCTGCAATTAGGGCGCAGGCACCAATGCATGGGGCTTGCATGATCACTCCAAGTTGACATTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR GCA 72 bp | AAGGCTGAAATCCCACACAGGTACCACAAGACATTGTaGATGCTCCAGTCCAGCAAGATGTCCAACACCACA | + |
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Preference number: 3 (lower is better) Translates to: KAEIPHRYHKTL*MLQSSKMSNTT Trigger: TGTGGTGTTGGACATCTTGCTGGACTGGAGCATGCACAATGTCTTGTGGTACCTGTGTGGGATTTCAGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| 3UTR-3UTR CAA 90 bp | TGTAGCGAGGCTTCCCATCTCCAGTGTGGCTCAGGCTCCAAGGCCTGTGAGTTATACCTTCTGATCCGTTaGTCTCATTTTATAGATGAC | + |
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Preference number: 3 (lower is better) Translates to: CSEASHLQCGSGSKACELYLLIR*SHFIDD Trigger: GTCATCTATAAAATGAGACAAACGGATCAGAAGGTA...TAACTCACAGGCCTTGGAGCCTGAGCCACACTGGAGATGGGAAGCCTCGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| 3UTR GCA 72 bp | CTGAAATCCCACACAGGTACCACAAGACATTGTGCATaGTCCAGTCCAGCAAGATGTCCAACACCACAAACA | + |
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Preference number: 3 (lower is better) Translates to: LKSHTGTTRHCA*SSPARCPTPQT Trigger: TGTTTGTGGTGTTGGACATCTTGCTGGACTGGAGCATGCACAATGTCTTGTGGTACCTGTGTGGGATTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| 3UTR TCA 72 bp | CACCTTTCAATGATTTTATTAGTGTGGTCACAAGTTTaGCACCTACAGGTCGCCATTAACAAAGCTGACGAC | + |
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Preference number: 3 (lower is better) Translates to: HLSMILLVWSQV*HLQVAINKADD Trigger: GTCGTCAGCTTTGTTAATGGCGACCTGTAGGTGTCAAACTTGTGACCACACTAATAAAATCATTGAAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR TCA 72 bp | CGTTTGTCTCATTTTATAGATGACTTCCGGCAAGAATaGGCAGACCATACTGTTATTGTACAGCTGTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: RLSHFIDDFRQE*ADHTVIVQLWK Trigger: TTTCCACAGCTGTACAATAACAGTATGGTCTGCTCATTCTTGCCGGAAGTCATCTATAAAATGAGACAAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| CDS-3UTR CCA 90 bp | ATCCTCGTGGCTCTGTACCCTCAGCGGGGTCAGGGTGGGGCCACCCTGCCTTTTTGGCTGCCGCCGCGATaGGCGATGGCGGACACGCGG | + |
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Preference number: 4 (lower is better) Translates to: ILVALYPQRGQGGATLPFWLPPR*AMADTR Trigger: CCGCGTGTCCGCCATCGCCCATCGCGGCGGCAGCCA...AAAAGGCAGGGTGGCCCCACCCTGACCCCGCTGAGGGTACAGAGCCACGAGGAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CCA 90 bp | AGACGCTGTAGCGAGGCTTCCCATCTCCAGTGTGGCTCAGGCTCCAAGGCCTGTTGGCTGCCGCCGCGATaGGCGATGGCGGACACGCGG | + |
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Preference number: 4 (lower is better) Translates to: RRCSEASHLQCGSGSKACWLPPR*AMADTR Trigger: CCGCGTGTCCGCCATCGCCCATCGCGGCGGCAGCCA...ACAGGCCTTGGAGCCTGAGCCACACTGGAGATGGGAAGCCTCGCTACAGCGTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| CDS-3UTR TCA 90 bp | GTGCTAACAGAGTGTTCTCATGTCCCTGCAAGAGGCCTCCAGGCAGTTTCGCAACGCGGTCACGGGGCTTaGGCACCTGCAGGGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: VLTECSHVPARGLQAVSQRGHGA*APAGPG Trigger: GCCGGGCCCTGCAGGTGCTCAAGCCCCGTGACCGCG...TTGCGAAACTGCCTGGAGGCCTCTTGCAGGGACATGAGAACACTCTGTTAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR GCA 90 bp | GCTCATCCTCGTGGCTCTGTACCCTCAGCGGGGTCAGGGTGGGGCCACCCTGCCCAGCTCCACACCTGTTaGTCCATTCTTAGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: AHPRGSVPSAGSGWGHPAQLHTC*SILSCL Trigger: CAGGCAGCTAAGAATGGAGCAACAGGTGTGGAGCTG...GGCAGGGTGGCCCCACCCTGACCCCGCTGAGGGTACAGAGCCACGAGGATGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CCA 90 bp | AAGGGCAAGTGTGGAGCCTTCCTTGGAGCATGGTCACCATGCCTGGTTTCTGCTTTCTCGGGCGCGTCGTaGCTGCCGCCGCGATGGGCG | + |
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Preference number: 4 (lower is better) Translates to: KGKCGAFLGAWSPCLVSAFSGAS*LPPRWA Trigger: CGCCCATCGCGGCGGCAGCCACGACGCGCCCGAGAA...AGCAGAAACCAGGCATGGTGACCATGCTCCAAGGAAGGCTCCACACTTGCCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CCA 90 bp | ATCCTCGTGGCTCTGTACCCTCAGCGGGGTCAGGGTGGGGCCACCCTGCCTTTTTTCCCATCTCCAGTGTaGCTCAGGCTCCAAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ILVALYPQRGQGGATLPFFPSPV*LRLQGL Trigger: CAGGCCTTGGAGCCTGAGCCACACTGGAGATGGGAA...AAAAGGCAGGGTGGCCCCACCCTGACCCCGCTGAGGGTACAGAGCCACGAGGAT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CCA 90 bp | GACGCTGTAGCGAGGCTTCCCATCTCCAGTGTGGCTCAGGCTCCAAGGCCTGTGTTCTTAGCTGCCGGATaGCCGCCAGCGTGTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: DAVARLPISSVAQAPRPVFLAAG*PPACSR Trigger: CCGAGAACACGCTGGCGGCCATCCGGCAGCTAAGAA...CACAGGCCTTGGAGCCTGAGCCACACTGGAGATGGGAAGCCTCGCTACAGCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| CDS-3UTR TCA 90 bp | ATCCTCGTGGCTCTGTACCCTCAGCGGGGTCAGGGTGGGGCCACCCTGCCTTTTAGGCTCCAAGGCCTGTaGGTTAGGGCTGTGATTACC | + |
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Preference number: 4 (lower is better) Translates to: ILVALYPQRGQGGATLPFRLQGL*VRAVIT Trigger: GGTAATCACAGCCCTAACTCACAGGCCTTGGAGCCT...AAAAGGCAGGGTGGCCCCACCCTGACCCCGCTGAGGGTACAGAGCCACGAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR GCA 90 bp | GCTCATCCTCGTGGCTCTGTACCCTCAGCGGGGTCAGGGTGGGGCCACCCTGCCACAAGACATTGTGCATaGTCCAGTCCAGCAAGATGT | + |
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Preference number: 4 (lower is better) Translates to: AHPRGSVPSAGSGWGHPATRHCA*SSPARC Trigger: ACATCTTGCTGGACTGGAGCATGCACAATGTCTTGT...GGCAGGGTGGCCCCACCCTGACCCCGCTGAGGGTACAGAGCCACGAGGATGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CCA 90 bp | ATGGCCTTTGACATCAAAGAAGATGGTGAGGTTATGGCGGAGGCACTCTGTGACTTCTCGGGCGCGTCGTaGCTGCCGCCGCGATGGGCG | + |
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Preference number: 4 (lower is better) Translates to: MAFDIKEDGEVMAEALCDFSGAS*LPPRWA Trigger: CGCCCATCGCGGCGGCAGCCACGACGCGCCCGAGAA...GTCACAGAGTGCCTCCGCCATAACCTCACCATCTTCTTTGATGTCAAAGGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| CDS-3UTR TCA 90 bp | GCAGCAGAAGCCATATCTGCATGGCCTTTGACATCAAAGAAGATGGTGAGGTTACGCGGTCACGGGGCTTaGGCACCTGCAGGGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: AAEAISAWPLTSKKMVRLRGHGA*APAGPG Trigger: GCCGGGCCCTGCAGGTGCTCAAGCCCCGTGACCGCG...TAACCTCACCATCTTCTTTGATGTCAAAGGCCATGCAGATATGGCTTCTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| CDS-3UTR GCA 90 bp | AGCCACAGGGTCCCCAGGGCTTGTGCTAACAGAGTGTTCTCATGTCCCTGCAAGTGCTCCATTCTTAGCTaGCTGCCGGATGGCCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SHRVPRACANRVFSCPCKCSILS*LPDGRQ Trigger: CTGGCGGCCATCCGGCAGGCAGCTAAGAATGGAGCA...CTTGCAGGGACATGAGAACACTCTGTTAGCACAAGCCCTGGGGACCCTGTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CCA 90 bp | GCTCATCCTCGTGGCTCTGTACCCTCAGCGGGGTCAGGGTGGGGCCACCCTGCCGAAGCCATATCTGCATaGCCTTTGACATCAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: AHPRGSVPSAGSGWGHPAEAISA*PLTSKK Trigger: CTTCTTTGATGTCAAAGGCCATGCAGATATGGCTTC...GGCAGGGTGGCCCCACCCTGACCCCGCTGAGGGTACAGAGCCACGAGGATGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CCA 90 bp | AGCCACAGGGTCCCCAGGGCTTGTGCTAACAGAGTGTTCTCATGTCCCTGCAAGGTCCAACTCACAACCTaGATTCCTTTAGCTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: SHRVPRACANRVFSCPCKVQLTT*IPLADH Trigger: GTGGTCAGCTAAAGGAATCCAGGTTGTGAGTTGGAC...CTTGCAGGGACATGAGAACACTCTGTTAGCACAAGCCCTGGGGACCCTGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR TCA 90 bp | AAATGTCAACTTGGAGTGATCATGCAAGCCCCATGCATTGGTGCCTGCGCCCTACTGCATGAGGAAGGCTaGAATCCCACACAGGTACCA | + |
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Preference number: 4 (lower is better) Translates to: KCQLGVIMQAPCIGACALLHEEG*NPTQVP Trigger: TGGTACCTGTGTGGGATTTCAGCCTTCCTCATGCAG...TAGGGCGCAGGCACCAATGCATGGGGCTTGCATGATCACTCCAAGTTGACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR TCA 90 bp | AAATGTCAACTTGGAGTGATCATGCAAGCCCCATGCATTGGTGCCTGCGCCCTACATCAAAGAAGATGGTaGGGTTATGGCGGAGGCACT | + |
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Preference number: 4 (lower is better) Translates to: KCQLGVIMQAPCIGACALHQRRW*GYGGGT Trigger: AGTGCCTCCGCCATAACCTCACCATCTTCTTTGATG...TAGGGCGCAGGCACCAATGCATGGGGCTTGCATGATCACTCCAAGTTGACATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR TCA 90 bp | TGTCCCTGCAAGAGGCCTCCAGGCAGTTTCGCAACTGTGTTTCCTCCTGGGGAGTTTCATCAAAGGTATTaGCAGTCCAACTCACAACCT | + |
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Preference number: 4 (lower is better) Translates to: CPCKRPPGSFATVFPPGEFHQRY*QSNSQP Trigger: AGGTTGTGAGTTGGACTGTCAATACCTTTGATGAAA...CTCCCCAGGAGGAAACACAGTTGCGAAACTGCCTGGAGGCCTCTTGCAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR GCA 90 bp | AGCCACAGGGTCCCCAGGGCTTGTGCTAACAGAGTGTTCTCATGTCCCTGCAAGTCTACTGTGTTATCGTaGATCAAGACAGGAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: SHRVPRACANRVFSCPCKSTVLS*IKTGTP Trigger: TGGAGTTCCTGTCTTGATGCACGATAACACAGTAGA...CTTGCAGGGACATGAGAACACTCTGTTAGCACAAGCCCTGGGGACCCTGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR GCA 90 bp | AGCCACAGGGTCCCCAGGGCTTGTGCTAACAGAGTGTTCTCATGTCCCTGCAAGGAGTCTGTGATTTGCTaGAGGGTTAAGTTTCCTAAC | + |
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Preference number: 4 (lower is better) Translates to: SHRVPRACANRVFSCPCKESVIC*RVKFPN Trigger: GTTAGGAAACTTAACCCTGCAGCAAATCACAGACTC...CTTGCAGGGACATGAGAACACTCTGTTAGCACAAGCCCTGGGGACCCTGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR GCA 90 bp | GTGCTAACAGAGTGTTCTCATGTCCCTGCAAGAGGCCTCCAGGCAGTTTCGCAAGAGACAAAATCCTTCTaGATGAGGAAGGCTGAAATC | + |
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Preference number: 4 (lower is better) Translates to: VLTECSHVPARGLQAVSQETKSF*MRKAEI Trigger: GATTTCAGCCTTCCTCATGCAGAAGGATTTTGTCTC...TTGCGAAACTGCCTGGAGGCCTCTTGCAGGGACATGAGAACACTCTGTTAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR GCA 90 bp | TTCATCAGGGAACTCGTTTCTGAGTCTGTGATTTGCTGCAGGGTTAAGTTTCCTCAGCTCCACACCTGTTaGTCCATTCTTAGCTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: FIRELVSESVICCRVKFPQLHTC*SILSCR Trigger: CCGGCAGCTAAGAATGGAGCAACAGGTGTGGAGCTG...AGGAAACTTAACCCTGCAGCAAATCACAGACTCAGAAACGAGTTCCCTGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| 3UTR CAA 72 bp | AGATCCAGAATTTTAAGGGCAAGTGTGGAGCCTTCCTaGGAGCATGGTCACCATGCCTGGTTTCTGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RSRILRASVEPS*EHGHHAWFLLV Trigger: AACAAGCAGAAACCAGGCATGGTGACCATGCTCCAAGGAAGGCTCCACACTTGCCCTTAAAATTCTGGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR TCA 90 bp | GGAGCATGGTCACCATGCCTGGTTTCTGCTTGTTGGGGTGACACTGTGACTATTCTGGATTCCTTTAGCTaGCCACTTCTTCAAATAGTC | + |
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Preference number: 4 (lower is better) Translates to: GAWSPCLVSACWGDTVTILDSFS*PLLQIV Trigger: GACTATTTGAAGAAGTGGTCAGCTAAAGGAATCCAG...AATAGTCACAGTGTCACCCCAACAAGCAGAAACCAGGCATGGTGACCATGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR GCA 90 bp | AGAGTGTTCTCATGTCCCTGCAAGAGGCCTCCAGGCAGTTTCGCAACTGTGTTTAGCAGAAGCCATATCTaGATGGCCTTTGACATCAAA | + |
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Preference number: 4 (lower is better) Translates to: RVFSCPCKRPPGSFATVFSRSHI*MAFDIK Trigger: TTTGATGTCAAAGGCCATGCAGATATGGCTTCTGCT...AAACACAGTTGCGAAACTGCCTGGAGGCCTCTTGCAGGGACATGAGAACACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR TCA 90 bp | CACCCTGCCTTTTTGCAGATCCAGAATTTTAAGGGCAAGTGTGGAGCCTTCCTTTGTGAGTTAGGGCTGTaGTTACCTTCTGATCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: HPAFLQIQNFKGKCGAFLCELGL*LPSDPF Trigger: AAACGGATCAGAAGGTAATCACAGCCCTAACTCACA...AAGGAAGGCTCCACACTTGCCCTTAAAATTCTGGATCTGCAAAAAGGCAGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR CAA 72 bp | TTCTTTAGAGCAGCAGAAGCCATATCTGCATGGCCTTaGACATCAAAGAAGATGGTGAGGTTATGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FFRAAEAISAWP*TSKKMVRLWRR Trigger: CCTCCGCCATAACCTCACCATCTTCTTTGATGTCAAAGGCCATGCAGATATGGCTTCTGCTGCTCTAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| CDS-3UTR TCA 90 bp | CCTTTCAATGATTTTATTAGTGTGGTCACAAGTTTGACACCTACAGGTCGCCATTCGTTTCTGAGTCTGTaGTTTGCTGCAGGGTTAAGT | + |
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Preference number: 4 (lower is better) Translates to: PFNDFISVVTSLTPTGRHSFLSL*FAAGLS Trigger: ACTTAACCCTGCAGCAAATCACAGACTCAGAAACGA...ATGGCGACCTGTAGGTGTCAAACTTGTGACCACACTAATAAAATCATTGAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| 3UTR CAA 72 bp | ATGACTTCCGGCAAGAATGAGCAGACCATACTGTTATaGTACAGCTGTGGAAATTCCGTGTATATATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: MTSGKNEQTILL*YSCGNSVYIFF Trigger: AAAGAATATATACACGGAATTTCCACAGCTGTACAATAACAGTATGGTCTGCTCATTCTTGCCGGAAGTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| CDS CCA 90 bp | TTAGCTGCCTGCCGGATGGCCGCCAGCGTGTTCTCGGGCGCGTCGTaGCTGCCGCCGCGATGGGCGATGGCGGACACGCGGTCACGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LAACRMAASVFSGAS*LPPRWAMADTRSRG Trigger: GCCCCGTGACCGCGTGTCCGCCATCGCCCATCGCGGCGGCAGCCACGACGCGCCCGAGAACACGCTGGCGGCCATCCGGCAGGCAGCTAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS GCA 90 bp | CCGCGATGGGCGATGGCGGACACGCGGTCACGGGGCTTGAGCACCTaGAGGGCCCGGCGGGACGGCACCGGCTCGAAGCTGAAGAACCGC | + |
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Preference number: 5 (lower is better) Translates to: PRWAMADTRSRGLST*RARRDGTGSKLKNR Trigger: GCGGTTCTTCAGCTTCGAGCCGGTGCCGTCCCGCCGGGCCCTGCAGGTGCTCAAGCCCCGTGACCGCGTGTCCGCCATCGCCCATCGCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038791.15 ENSMUST00000207323.2 ENSMUST00000208040.2 |
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| CDS CCA 90 bp | ATGGCCGCCAGCGTGTTCTCGGGCGCGTCGTGGCTGCCGCCGCGATaGGCGATGGCGGACACGCGGTCACGGGGCTTGAGCACCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: MAASVFSGASWLPPR*AMADTRSRGLSTCR Trigger: CCTGCAGGTGCTCAAGCCCCGTGACCGCGTGTCCGCCATCGCCCATCGCGGCGGCAGCCACGACGCGCCCGAGAACACGCTGGCGGCCAT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038791.15 ENSMUST00000207323.2 ENSMUST00000208040.2 |
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| CDS CCA 90 bp | TGTCTCATCTGCCGGATGGCCGCCAGCGTGTTCTCGGGCGCGTCGTaGCTGCCGCCGCGATGGGCGATGGCGGACACGCGGTCACGGGGC | + |
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Preference number: 5 (lower is better) Translates to: CLICRMAASVFSGAS*LPPRWAMADTRSRG Trigger: GCCCCGTGACCGCGTGTCCGCCATCGCCCATCGCGGCGGCAGCCACGACGCGCCCGAGAACACGCTGGCGGCCATCCGGCAGATGAGACA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207323.2 |
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| CDS CCA 90 bp | ATTCTTAGCTGCCGGATGGCCGCCAGCGTGTTCTCGGGCGCGTCGTaGCTGCCGCCGCGATGGGCGATGGCGGACACGCGGTCACGGGGC | + |
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Preference number: 5 (lower is better) Translates to: ILSCRMAASVFSGAS*LPPRWAMADTRSRG Trigger: GCCCCGTGACCGCGTGTCCGCCATCGCCCATCGCGGCGGCAGCCACGACGCGCCCGAGAACACGCTGGCGGCCATCCGGCAGCTAAGAAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| CDS-3UTR CAA 90 bp | GACGCTGTAGCGAGGCTTCCCATCTCCAGTGTGGCTCAGGCTCCAAGGCCTGTGACGCGGTCACGGGGCTaGAGCACCTGCAGGGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: DAVARLPISSVAQAPRPVTRSRG*STCRAR Trigger: CCGGGCCCTGCAGGTGCTCAAGCCCCGTGACCGCGT...CACAGGCCTTGGAGCCTGAGCCACACTGGAGATGGGAAGCCTCGCTACAGCGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| CDS-3UTR CAA 90 bp | GTGCTAACAGAGTGTTCTCATGTCCCTGCAAGAGGCCTCCAGGCAGTTTCGCAAACGCGGTCACGGGGCTaGAGCACCTGCAGGGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: VLTECSHVPARGLQAVSQTRSRG*STCRAR Trigger: CCGGGCCCTGCAGGTGCTCAAGCCCCGTGACCGCGT...TTGCGAAACTGCCTGGAGGCCTCTTGCAGGGACATGAGAACACTCTGTTAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CAA 90 bp | GGAGCATGGTCACCATGCCTGGTTTCTGCTTGTTGGGGTGACACTGTGACTATTGTGAGCACGCAGGCGTaGAAGGGGCTGCGTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: GAWSPCLVSACWGDTVTIVSTQA*KGLRVT Trigger: GGTGACACGCAGCCCCTTCAACGCCTGCGTGCTCAC...AATAGTCACAGTGTCACCCCAACAAGCAGAAACCAGGCATGGTGACCATGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CAA 90 bp | GCTCATCCTCGTGGCTCTGTACCCTCAGCGGGGTCAGGGTGGGGCCACCCTGCCTTTTCATCAAAGGTATaGACAGTCCAACTCACAACC | + |
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Preference number: 5 (lower is better) Translates to: AHPRGSVPSAGSGWGHPAFSSKV*TVQLTT Trigger: GGTTGTGAGTTGGACTGTCAATACCTTTGATGAAAA...GGCAGGGTGGCCCCACCCTGACCCCGCTGAGGGTACAGAGCCACGAGGATGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CAA 90 bp | ACTTCCGGCAAGAATGAGCAGACCATACTGTTATTGTACAGCTGTGGAAATTCCGTGAGCACGCAGGCGTaGAAGGGGCTGCGTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: TSGKNEQTILLLYSCGNSVSTQA*KGLRVT Trigger: GGTGACACGCAGCCCCTTCAACGCCTGCGTGCTCAC...GGAATTTCCACAGCTGTACAATAACAGTATGGTCTGCTCATTCTTGCCGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208040.2 |
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| CDS GCA 90 bp | TGCATGAGGAAGGCTGAAATCCCACACAGGTACCACAAGACATTGTaGATGCTCCAGTCCAGCAAGATGTCCAACACCACAAACACAGAC | + |
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Preference number: 5 (lower is better) Translates to: CMRKAEIPHRYHKTL*MLQSSKMSNTTNTD Trigger: GTCTGTGTTTGTGGTGTTGGACATCTTGCTGGACTGGAGCATGCACAATGTCTTGTGGTACCTGTGTGGGATTTCAGCCTTCCTCATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038791.15 ENSMUST00000132509.4 |
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| CDS TCA 90 bp | CTTCAAATAGTCCGGGGAGACAAAATCCTTCTGCATGAGGAAGGCTaGAATCCCACACAGGTACCACAAGACATTGTGCATGCTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: LQIVRGDKILLHEEG*NPTQVPQDIVHAPV Trigger: GACTGGAGCATGCACAATGTCTTGTGGTACCTGTGTGGGATTTCAGCCTTCCTCATGCAGAAGGATTTTGTCTCCCCGGACTATTTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038791.15 ENSMUST00000132509.4 |
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| CDS GCA 90 bp | CATAGTCGGCCAGACCCGTCTGTTGTCCTATCTACTGTGTTATCGTaGATCAAGACAGGAACTCCATCAGAAGTAAACTCGATGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: HSRPDPSVVLSTVLS*IKTGTPSEVNSMSS Trigger: GCTGGACATCGAGTTTACTTCTGATGGAGTTCCTGTCTTGATGCACGATAACACAGTAGATAGGACAACAGACGGGTCTGGCCGACTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS TCA 90 bp | CTGACCACTTCTTCAAATAGTCCGGGGAGACAAAATCCTTCTGCATaGGGAAGGCTGAAATCCCACACAGGTACCACAAGACATTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LTTSSNSPGRQNPSA*GRLKSHTGTTRHCA Trigger: TGCACAATGTCTTGTGGTACCTGTGTGGGATTTCAGCCTTCCTCATGCAGAAGGATTTTGTCTCCCCGGACTATTTGAAGAAGTGGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038791.15 ENSMUST00000132509.4 |
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| CDS-3UTR CAA 90 bp | AAATGTCAACTTGGAGTGATCATGCAAGCCCCATGCATTGGTGCCTGCGCCCTACAGACCATACTGTTATaGTACAGCTGTGGAAATTCC | + |
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Preference number: 5 (lower is better) Translates to: KCQLGVIMQAPCIGACALQTILL*YSCGNS Trigger: GGAATTTCCACAGCTGTACAATAACAGTATGGTCTG...TAGGGCGCAGGCACCAATGCATGGGGCTTGCATGATCACTCCAAGTTGACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS-3UTR CAA 90 bp | AAATGTCAACTTGGAGTGATCATGCAAGCCCCATGCATTGGTGCCTGCGCCCTATACCTTCTGATCCGTTaGTCTCATTTTATAGATGAC | + |
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Preference number: 5 (lower is better) Translates to: KCQLGVIMQAPCIGACALYLLIR*SHFIDD Trigger: GTCATCTATAAAATGAGACAAACGGATCAGAAGGTA...TAGGGCGCAGGCACCAATGCATGGGGCTTGCATGATCACTCCAAGTTGACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS TCA 90 bp | ATCAAAGGTATTGACAGTCCAACTCACAACCTGGATTCCTTTAGCTaGCCACTTCTTCAAATAGTCCGGGGAGACAAAATCCTTCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: IKGIDSPTHNLDSFS*PLLQIVRGDKILLH Trigger: ATGCAGAAGGATTTTGTCTCCCCGGACTATTTGAAGAAGTGGTCAGCTAAAGGAATCCAGGTTGTGAGTTGGACTGTCAATACCTTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS CAA 72 bp | CCGCGATGGGCGATGGCGGACACGCGGTCACGGGGCTaGAGCACCTGCAGGGCCCGGCGGGACGGCACCGGC | + |
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Preference number: 6 (lower is better) Translates to: PRWAMADTRSRG*STCRARRDGTG Trigger: GCCGGTGCCGTCCCGCCGGGCCCTGCAGGTGCTCAAGCCCCGTGACCGCGTGTCCGCCATCGCCCATCGCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038791.15 ENSMUST00000207323.2 ENSMUST00000208040.2 |
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| CDS CAA 90 bp | TGGCTGCCGCCGCGATGGGCGATGGCGGACACGCGGTCACGGGGCTaGAGCACCTGCAGGGCCCGGCGGGACGGCACCGGCTCGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: WLPPRWAMADTRSRG*STCRARRDGTGSKL Trigger: CAGCTTCGAGCCGGTGCCGTCCCGCCGGGCCCTGCAGGTGCTCAAGCCCCGTGACCGCGTGTCCGCCATCGCCCATCGCGGCGGCAGCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038791.15 ENSMUST00000207323.2 ENSMUST00000208040.2 |
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| CDS TCA 72 bp | CGCGATGGGCGATGGCGGACACGCGGTCACGGGGCTTaGGCACCTGCAGGGCCCGGCGGGACGGCACCGGCT | + |
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Preference number: 6 (lower is better) Translates to: RDGRWRTRGHGA*APAGPGGTAPA Trigger: AGCCGGTGCCGTCCCGCCGGGCCCTGCAGGTGCTCAAGCCCCGTGACCGCGTGTCCGCCATCGCCCATCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038791.15 ENSMUST00000207323.2 ENSMUST00000208040.2 |
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| CDS CCA 72 bp | TGCCGGATGGCCGCCAGCGTGTTCTCGGGCGCGTCGTaGCTGCCGCCGCGATGGGCGATGGCGGACACGCGG | + |
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Preference number: 6 (lower is better) Translates to: CRMAASVFSGAS*LPPRWAMADTR Trigger: CCGCGTGTCCGCCATCGCCCATCGCGGCGGCAGCCACGACGCGCCCGAGAACACGCTGGCGGCCATCCGGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038791.15 ENSMUST00000207323.2 ENSMUST00000208040.2 |
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| CDS GCA 72 bp | GCGATGGCGGACACGCGGTCACGGGGCTTGAGCACCTaGAGGGCCCGGCGGGACGGCACCGGCTCGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: AMADTRSRGLST*RARRDGTGSKL Trigger: CAGCTTCGAGCCGGTGCCGTCCCGCCGGGCCCTGCAGGTGCTCAAGCCCCGTGACCGCGTGTCCGCCATCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038791.15 ENSMUST00000207323.2 ENSMUST00000208040.2 |
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| CDS GCA 72 bp | GGATGGCCGCCAGCGTGTTCTCGGGCGCGTCGTGGCTaGCGCCGCGATGGGCGATGGCGGACACGCGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: GWPPACSRARRG*RRDGRWRTRGH Trigger: GTGACCGCGTGTCCGCCATCGCCCATCGCGGCGGCAGCCACGACGCGCCCGAGAACACGCTGGCGGCCATCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038791.15 ENSMUST00000207323.2 ENSMUST00000208040.2 |
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| CDS CCA 72 bp | AGCGTGTTCTCGGGCGCGTCGTGGCTGCCGCCGCGATaGGCGATGGCGGACACGCGGTCACGGGGCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SVFSGASWLPPR*AMADTRSRGLS Trigger: GCTCAAGCCCCGTGACCGCGTGTCCGCCATCGCCCATCGCGGCGGCAGCCACGACGCGCCCGAGAACACGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038791.15 ENSMUST00000207323.2 ENSMUST00000208040.2 |
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| CDS GCA 72 bp | ATCAGAAGTAAACTCGATGTCCAGCTCCACACCTGTTaGTCCATTCTTAGCTGCCTGCCGGATGGCCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: IRSKLDVQLHTC*SILSCLPDGRQ Trigger: CTGGCGGCCATCCGGCAGGCAGCTAAGAATGGAGCAACAGGTGTGGAGCTGGACATCGAGTTTACTTCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS TCA 72 bp | GTCCGGGGAGACAAAATCCTTCTGCATGAGGAAGGCTaGAATCCCACACAGGTACCACAAGACATTGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: VRGDKILLHEEG*NPTQVPQDIVH Trigger: ATGCACAATGTCTTGTGGTACCTGTGTGGGATTTCAGCCTTCCTCATGCAGAAGGATTTTGTCTCCCCGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038791.15 ENSMUST00000132509.4 |
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| CDS GCA 72 bp | CCAGACCCGTCTGTTGTCCTATCTACTGTGTTATCGTaGATCAAGACAGGAACTCCATCAGAAGTAAACTCG | + |
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Preference number: 6 (lower is better) Translates to: PDPSVVLSTVLS*IKTGTPSEVNS Trigger: CGAGTTTACTTCTGATGGAGTTCCTGTCTTGATGCACGATAACACAGTAGATAGGACAACAGACGGGTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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| CDS CAA 72 bp | CAAATGTCAGATCACATAGTCGGCCAGACCCGTCTGTaGTCCTATCTACTGTGTTATCGTGCATCAAGACAG | + |
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Preference number: 6 (lower is better) Translates to: QMSDHIVGQTRL*SYLLCYRASRQ Trigger: CTGTCTTGATGCACGATAACACAGTAGATAGGACAACAGACGGGTCTGGCCGACTATGTGATCTGACATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038791.15 |
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