Pregenerated sensors for GDAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027865Ensembl transcript IDs: ENSMUST00000029459.10, ENSMUST00000106997.2, ENSMUST00000197797.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCTGTGACCGAGAAGCACTGGGAAGGCGCAGGTCACAAATCTGGTaGTGGAGGATAAGATGCAAAATAAGGCCCATTTTCCCTCGCGTC | + |
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Preference number: 1 (lower is better) Translates to: SCDREALGRRRSQIW*WRIRCKIRPIFPRV Trigger: GACGCGAGGGAAAATGGGCCTTATTTTGCATCTTATCCTCCATCACCAGATTTGTGACCTGCGCCTTCCCAGTGCTTCTCGGTCACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| 3UTR CCA 90 bp | AGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTAAATaGAATCCTGTGACCGAGAAGCACTGGGAAGGCGCAGGTCACAAA | + |
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Preference number: 1 (lower is better) Translates to: SKNEHHSDRWRVVVK*NPVTEKHWEGAGHK Trigger: TTTGTGACCTGCGCCTTCCCAGTGCTTCTCGGTCACAGGATTCCATTTAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| 3UTR CCA 90 bp | AGCTCTCTGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTaGCGAGTTGTGGTTAAATGGAATCCTGTGACCGAGAAGCACTGG | + |
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Preference number: 1 (lower is better) Translates to: SSLDLYSKNEHHSDR*RVVVKWNPVTEKHW Trigger: CCAGTGCTTCTCGGTCACAGGATTCCATTTAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCAGAGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR CCA 90 bp | ACACAATCATTGATGACTCTGAGAAGACAGCAATGTGGTCAGGGATaGAGTCCTGGGAAATGGTCTTTACTTAGGAGTGCTGGGAGCACA | + |
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Preference number: 1 (lower is better) Translates to: TQSLMTLRRQQCGQG*SPGKWSLLRSAGST Trigger: TGTGCTCCCAGCACTCCTAAGTAAAGACCATTTCCCAGGACTCCATCCCTGACCACATTGCTGTCTTCTCAGAGTCATCAATGATTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| 3UTR GCA 90 bp | TATTGGGTGAACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTaGTCTGCAGCACGCTTACAGACAGATGCTCACAGGGACTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: YWVNMLNDYPKAHGC*SAARLQTDAHRDCC Trigger: ACAACAGTCCCTGTGAGCATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTTCACCCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACACTCTACCGCACGCACCCCACTTCCCTCAATCCTCTGCATCCTGGAAAAGAGAAGACAGCAATGTaGTCAGGGATGGAGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KTLYRTHPTSLNPLHPGKEKTAM*SGMESW Trigger: CCAGGACTCCATCCCTGACCACATTGCTGTCTTCTC...TTTTCCAGGATGCAGAGGATTGAGGGAAGTGGGGTGCGTGCGGTAGAGTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGCACGCACAGCTCAGCTGTAGCTTGGGCCAACAATCTGCCAATTCTATGAGCTCAGCTGTAGCTTaGGCCAACAATCTGCCAATT | + |
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Preference number: 2 (lower is better) Translates to: KKHAQLSCSLGQQSANSMSSAVA*ANNLPI Trigger: AATTGGCAGATTGTTGGCCCAAGCTACAGCTGAGCT...CATAGAATTGGCAGATTGTTGGCCCAAGCTACAGCTGAGCTGTGCGTGCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACACTCTACCGCACGCACCCCACTTCCCTCAATCCTCTGCATCCTGGAAAAGAGTCACGAGTCACATaGTTAAAGAAGACAGTTGAA | + |
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Preference number: 2 (lower is better) Translates to: KTLYRTHPTSLNPLHPGKESRVT*LKKTVE Trigger: TTCAACTGTCTTCTTTAATCATGTGACTCGTGACTC...TTTTCCAGGATGCAGAGGATTGAGGGAAGTGGGGTGCGTGCGGTAGAGTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAGGATCTGAGGGAACAATGCATCCGTTTAGCATACATTGGTTCTATATACGTTGGTGGCCTGTGTaGCAGAGTCCAGTGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: KPGSEGTMHPFSIHWFYIRWWPV*QSPVSF Trigger: AAAGGACACTGGACTCTGTCACACAGGCCACCAACG...TATATAGAACCAATGTATGCTAAACGGATGCATTGTTCCCTCAGATCCTGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGCACGCACAGCTCAGCTGTAGCTTGGGCCAACAATCTGCCAATTCTATGAGGTCACAAATCTGGTaGTGGAGGATAAGATGCAAA | + |
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Preference number: 2 (lower is better) Translates to: KKHAQLSCSLGQQSANSMRSQIW*WRIRCK Trigger: TTTGCATCTTATCCTCCATCACCAGATTTGTGACCT...CATAGAATTGGCAGATTGTTGGCCCAAGCTACAGCTGAGCTGTGCGTGCTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| 3UTR CAA 90 bp | CATACTGATGTAGGCGACTCAAGTGATACTGAACCAACACAATCATaGATGACTCTGAGAAGACAGCAATGTGGTCAGGGATGGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HTDVGDSSDTEPTQS*MTLRRQQCGQGWSP Trigger: AGGACTCCATCCCTGACCACATTGCTGTCTTCTCAGAGTCATCAATGATTGTGTTGGTTCAGTATCACTTGAGTCGCCTACATCAGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| 3UTR CAA 90 bp | GAACAAAGTAGACAACCCAAGAAGCACGCACAGCTCAGCTGTAGCTaGGGCCAACAATCTGCCAATTCTATGTTGTTGAAGGTTTTTACA | + |
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Preference number: 2 (lower is better) Translates to: EQSRQPKKHAQLSCS*GQQSANSMLLKVFT Trigger: TGTAAAAACCTTCAACAACATAGAATTGGCAGATTGTTGGCCCAAGCTACAGCTGAGCTGTGCGTGCTTCTTGGGTTGTCTACTTTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR-3UTR TCA 90 bp | GTATTAAAGCCAGGATCTGAGGGAACAATGCATCCGTTTAGCATACATTGGTTCTTAAATGGAATCCTGTaGCCGAGAAGCACTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VLKPGSEGTMHPFSIHWFLNGIL*PRSTGK Trigger: CTTCCCAGTGCTTCTCGGTCACAGGATTCCATTTAA...GAACCAATGTATGCTAAACGGATGCATTGTTCCCTCAGATCCTGGCTTTAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR-3UTR TCA 90 bp | GATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTAAATTAAATGGAATCCTGTaGCCGAGAAGCACTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: DLYSKNEHHSDRWRVVVKLNGIL*PRSTGK Trigger: CTTCCCAGTGCTTCTCGGTCACAGGATTCCATTTAA...TTTAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCATCCTGGAAAAGCCAGGTTCTTTCTAAATCCTATCTTTATGTTACCTCTGTCATGCTCTCCACACTaGGATCAGAGCAGTGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: LHPGKARFFLNPIFMLPLSCSPH*DQSSVN Trigger: ATTGACACTGCTCTGATCTCAGTGTGGAGAGCATGA...CAGAGGTAACATAAAGATAGGATTTAGAAAGAACCTGGCTTTTCCAGGATGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| 3UTR-3UTR CCA 90 bp | GTATTAAAGCCAGGATCTGAGGGAACAATGCATCCGTTTAGCATACATTGGTTCGGGACAAAAGCTCTCTaGATCTGTACAGCAAAAATG | + |
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Preference number: 2 (lower is better) Translates to: VLKPGSEGTMHPFSIHWFGTKAL*ICTAKM Trigger: CATTTTTGCTGTACAGATCCAGAGAGCTTTTGTCCC...GAACCAATGTATGCTAAACGGATGCATTGTTCCCTCAGATCCTGGCTTTAATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTTTAGGAAACTGGAGACACTCAAAAGTTGATCCCCAGTTTCTATTAATGAAAATACCAGAGAGGTaGGGACAAAAGCTCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CPLGNWRHSKVDPQFLLMKIPER*GQKLSG Trigger: TCCAGAGAGCTTTTGTCCCCACCTCTCTGGTATTTT...CATTAATAGAAACTGGGGATCAACTTTTGAGTGTCTCCAGTTTCCTAAAGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR-3UTR CCA 90 bp | GTATTAAAGCCAGGATCTGAGGGAACAATGCATCCGTTTAGCATACATTGGTTCGTATGCAGTTCAGAATaGCCTACCAGTTTTAGATTG | + |
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Preference number: 2 (lower is better) Translates to: VLKPGSEGTMHPFSIHWFVCSSE*PTSFRL Trigger: CAATCTAAAACTGGTAGGCCATTCTGAACTGCATAC...GAACCAATGTATGCTAAACGGATGCATTGTTCCCTCAGATCCTGGCTTTAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCAGTGTCCTTTAGGAAACTGGAGACACTCAAAAGTTGATCCCCAGTTTCTATGTCCTTTAGGAAACTaGAGACACTCAAAAGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: VQCPLGNWRHSKVDPQFLCPLGN*RHSKVD Trigger: ATCAACTTTTGAGTGTCTCCAGTTTCCTAAAGGACA...TAGAAACTGGGGATCAACTTTTGAGTGTCTCCAGTTTCCTAAAGGACACTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCATCCTGGAAAAGCCAGGTTCTTTCTAAATCCTATCTTTATGTTACCTCTGGATCTGAGGGAACAATaGATCCGTTTAGCATACATT | + |
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Preference number: 2 (lower is better) Translates to: LHPGKARFFLNPIFMLPLDLREQ*IRLAYI Trigger: AATGTATGCTAAACGGATGCATTGTTCCCTCAGATC...CAGAGGTAACATAAAGATAGGATTTAGAAAGAACCTGGCTTTTCCAGGATGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| 3UTR CAA 90 bp | GCACAGCTCAGCTGTAGCTTGGGCCAACAATCTGCCAATTCTATGTaGTTGAAGGTTTTTACAGTTTTGATCATACACATTTCAATATTC | + |
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Preference number: 2 (lower is better) Translates to: AQLSCSLGQQSANSM*LKVFTVLIIHISIF Trigger: GAATATTGAAATGTGTATGATCAAAACTGTAAAAACCTTCAACAACATAGAATTGGCAGATTGTTGGCCCAAGCTACAGCTGAGCTGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR CCA 72 bp | GTTGTGGTTAAATGGAATCCTGTGACCGAGAAGCACTaGGAAGGCGCAGGTCACAAATCTGGTGATGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: VVVKWNPVTEKH*EGAGHKSGDGG Trigger: TCCTCCATCACCAGATTTGTGACCTGCGCCTTCCCAGTGCTTCTCGGTCACAGGATTCCATTTAACCACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| 3UTR TCA 72 bp | CGAGAAGCACTGGGAAGGCGCAGGTCACAAATCTGGTaGTGGAGGATAAGATGCAAAATAAGGCCCATTTTC | + |
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Preference number: 3 (lower is better) Translates to: REALGRRRSQIW*WRIRCKIRPIF Trigger: GAAAATGGGCCTTATTTTGCATCTTATCCTCCATCACCAGATTTGTGACCTGCGCCTTCCCAGTGCTTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGCCGATAGGTGGCGAGTaGTGGTTAAATGGAATCCTG | + |
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Preference number: 3 (lower is better) Translates to: SLDLYSKNEHHSDRWRVVPIGGE*WLNGIL Trigger: CAGGATTCCATTTAACCACAACTCGCCACCTATCGG...CACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR GCA 72 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTaGTCTGCAGCACGCTTACAGACAGATGCTCACAGG | + |
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Preference number: 3 (lower is better) Translates to: NMLNDYPKAHGC*SAARLQTDAHR Trigger: CCTGTGAGCATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| 3UTR CCA 72 bp | TTGATGACTCTGAGAAGACAGCAATGTGGTCAGGGATaGAGTCCTGGGAAATGGTCTTTACTTAGGAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: LMTLRRQQCGQG*SPGKWSLLRSA Trigger: AGCACTCCTAAGTAAAGACCATTTCCCAGGACTCCATCCCTGACCACATTGCTGTCTTCTCAGAGTCATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| 3UTR CCA 72 bp | GATCTGTACAGCAAAAATGAACATCACTCCGATAGGTaGCGAGTTGTGGTTAAATGGAATCCTGTGACCGAG | + |
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Preference number: 3 (lower is better) Translates to: DLYSKNEHHSDR*RVVVKWNPVTE Trigger: CTCGGTCACAGGATTCCATTTAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR TCA 72 bp | AAGACAGTTGAAGGTACAGTCTCATGCTCTCCACACTaGGATCAGAGCAGTGTCAATAGGAACAAAGTAGAC | + |
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Preference number: 3 (lower is better) Translates to: KTVEGTVSCSPH*DQSSVNRNKVD Trigger: GTCTACTTTGTTCCTATTGACACTGCTCTGATCTCAGTGTGGAGAGCATGAGACTGTACCTTCAACTGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR TCA 72 bp | AGACGAGTCACGAGTCACATGATTAAAGAAGACAGTTaGAGGTACAGTCTCATGCTCTCCACACTGAGATCA | + |
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Preference number: 3 (lower is better) Translates to: RRVTSHMIKEDS*RYSLMLSTLRS Trigger: TGATCTCAGTGTGGAGAGCATGAGACTGTACCTTCAACTGTCTTCTTTAATCATGTGACTCGTGACTCGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR TCA 72 bp | CATATATTTATTCCCATTAACCCATTGAGAACTGAATaGAGACACTCTACCGCACGCACCCCACTTCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: HIFIPINPLRTE*RHSTARTPLPS Trigger: TGAGGGAAGTGGGGTGCGTGCGGTAGAGTGTCTTCATTCAGTTCTCAATGGGTTAATGGGAATAAATATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| 3UTR TCA 72 bp | GGATGTTTCCTAAGGTTATTGGGTGAACATGCTAAATaGTTATCCCAAAGCTCATGGCTGTTGCTCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GCFLRLLGEHAK*LSQSSWLLLCS Trigger: GCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTTCACCCAATAACCTTAGGAAACATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| 3UTR-3UTR CAA 90 bp | TATTTTGAGAAACACTTAAATACACAGAGAGAGCGTGCACTGTTTAAGAGATGCCCGATAGGTGGCGAGTaGTGGTTAAATGGAATCCTG | + |
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Preference number: 3 (lower is better) Translates to: YFEKHLNTQRERALFKRCPIGGE*WLNGIL Trigger: CAGGATTCCATTTAACCACAACTCGCCACCTATCGG...GCATCTCTTAAACAGTGCACGCTCTCTCTGTGTATTTAAGTGTTTCTCAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCATCCTGGAAAAGCCAGGTTCTTTCTAAATCCTATCTTTATGTTACCTCTGTTCTGGTCCTTGGATTaGTGCACTGTTACATACTCC | + |
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Preference number: 3 (lower is better) Translates to: LHPGKARFFLNPIFMLPLFWSLD*CTVTYS Trigger: GGAGTATGTAACAGTGCACAAATCCAAGGACCAGAA...CAGAGGTAACATAAAGATAGGATTTAGAAAGAACCTGGCTTTTCCAGGATGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR GCA 90 bp | CACTCCGATAGGTGGCGAGTTGTGGTTAAATGGAATCCTGTGACCGAGAAGCACATGGCAGAGAAGAGCTaGTGCAGGCTGTCTACGTGG | + |
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Preference number: 4 (lower is better) Translates to: HSDRWRVVVKWNPVTEKHMAEKS*CRLSTW Trigger: CCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCAT...GTGCTTCTCGGTCACAGGATTCCATTTAACCACAACTCGCCACCTATCGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| CDS-3UTR GCA 90 bp | GATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGACAGATGCTGCTCACACCTGCTGCTaGGGCACACCTGCATACTAC | + |
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Preference number: 4 (lower is better) Translates to: DYPKAHGCCSAARLQTDAAHTCC*GTPAYY Trigger: GTAGTATGCAGGTGTGCCGCAGCAGCAGGTGTGAGC...AGCATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS-3UTR GCA 90 bp | GATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGACAGATGCTCCATATGCTCACACCTaGTGCTGCGGCACACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: DYPKAHGCCSAARLQTDAPYAHT*CCGTPA Trigger: TGCAGGTGTGCCGCAGCAGCAGGTGTGAGCATATGG...AGCATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS-3UTR GCA 90 bp | ATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGACAGATGGCAGAGAAGAGCTGCTaGAGGCTGTCTACGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: MIIPKLMAVALQHAYRQMAEKSC*RLSTWW Trigger: CCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGC...CATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS-3UTR GCA 90 bp | GGGAAGGCGCAGGTCACAAATCTGGTGATGGAGGATAAGATGCAAAATAAGGCCATGGCAGAGAAGAGCTaGTGCAGGCTGTCTACGTGG | + |
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Preference number: 4 (lower is better) Translates to: GKAQVTNLVMEDKMQNKAMAEKS*CRLSTW Trigger: CCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCAT...GGCCTTATTTTGCATCTTATCCTCCATCACCAGATTTGTGACCTGCGCCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| CDS-3UTR CCA 90 bp | TGGGTGAACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACTGCTGGCGTCTTCCTaGAAGGCCTCGGCAGTACTG | + |
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Preference number: 4 (lower is better) Translates to: WVNMLNDYPKAHGCCSAALLASS*KASAVL Trigger: CAGTACTGCCGAGGCCTTCCAGGAAGACGCCAGCAG...TGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTTCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS-3UTR GCA 90 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGGGAACTCTCCGCTaGAGTGCGGTAGCGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NMLNDYPKAHGCCSAARLQGTLR*SAVAAL Trigger: AAGAGCCGCTACCGCACTGCAGCGGAGAGTTCCCTG...TAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS-3UTR GCA 90 bp | ACACAATCATTGATGACTCTGAGAAGACAGCAATGTGGTCAGGGATGGAGTCCTGCAGAGAAGAGCTGCTaGAGGCTGTCTACGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TQSLMTLRRQQCGQGWSPAEKSC*RLSTWW Trigger: CCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGC...AGGACTCCATCCCTGACCACATTGCTGTCTTCTCAGAGTCATCAATGATTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR TCA 90 bp | AAGAAGCACGCACAGCTCAGCTGTAGCTTGGGCCAACAATCTGCCAATTCTATGTTAGGTCCCACTGTGTaGATGATGAACCGAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KKHAQLSCSLGQQSANSMLGPTV*MMNRAA Trigger: AGCTGCTCGGTTCATCATTCACACAGTGGGACCTAA...CATAGAATTGGCAGATTGTTGGCCCAAGCTACAGCTGAGCTGTGCGTGCTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR TCA 90 bp | AAGACACTCTACCGCACGCACCCCACTTCCCTCAATCCTCTGCATCCTGGAAAAGGCCTCTTCGAGTTCTaGGACAGCAAATACTACTTT | + |
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Preference number: 4 (lower is better) Translates to: KTLYRTHPTSLNPLHPGKGLFEF*DSKYYF Trigger: AAAGTAGTATTTGCTGTCTCAGAACTCGAAGAGGCC...TTTTCCAGGATGCAGAGGATTGAGGGAAGTGGGGTGCGTGCGGTAGAGTGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR TCA 90 bp | CACTCCGATAGGTGGCGAGTTGTGGTTAAATGGAATCCTGTGACCGAGAAGCACCTTGTCCTTCAGTCCTaGGACAGAAAAGGTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: HSDRWRVVVKWNPVTEKHLVLQS*DRKGGE Trigger: TTCACCACCTTTTCTGTCTCAGGACTGAAGGACAAG...GTGCTTCTCGGTCACAGGATTCCATTTAACCACAACTCGCCACCTATCGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CCA 90 bp | AAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTAAATGGAATCCTGTGCTGCTGGCGTCTTCCTaGAAGGCCTCGGCAGTACTG | + |
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Preference number: 4 (lower is better) Translates to: KNEHHSDRWRVVVKWNPVLLASS*KASAVL Trigger: CAGTACTGCCGAGGCCTTCCAGGAAGACGCCAGCAG...CACAGGATTCCATTTAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR TCA 90 bp | AAAACCCTCCTGGGACAAGGATGTTTCCTAAGGTTATTGGGTGAACATGCTAAACTGGCCCCGCAAGCATaGAGATGCTCTCTGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KTLLGQGCFLRLLGEHAKLAPQA*RCSLTQ Trigger: CTGTGTCAGAGAGCATCTTCATGCTTGCGGGGCCAG...TTTAGCATGTTCACCCAATAACCTTAGGAAACATCCTTGTCCCAGGAGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR TCA 90 bp | ATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGACAGATGGAGACAAAAGCTCTGTaGAGCAGCCTTCATGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MIIPKLMAVALQHAYRQMETKAL*SSLHGR Trigger: CCTACCATGAAGGCTGCTTCACAGAGCTTTTGTCTC...CATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGGATCTGAGGGAACAATGCATCCGTTTAGCATACATTGGTTCTATATACAGGGAACTCTCCGCTaGAGTGCGGTAGCGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPGSEGTMHPFSIHWFYIQGTLR*SAVAAL Trigger: AAGAGCCGCTACCGCACTGCAGCGGAGAGTTCCCTG...TATATAGAACCAATGTATGCTAAACGGATGCATTGTTCCCTCAGATCCTGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR GCA 90 bp | AAAACCCTCCTGGGACAAGGATGTTTCCTAAGGTTATTGGGTGAACATGCTAAACGTGACACACCCATATaGTCACACCTGCTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTLLGQGCFLRLLGEHAKRDTPI*SHLLLR Trigger: CCGCAGCAGCAGGTGTGAGCATATGGGTGTGTCACG...TTTAGCATGTTCACCCAATAACCTTAGGAAACATCCTTGTCCCAGGAGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| 3UTR CAA 72 bp | AGACAACCCAAGAAGCACGCACAGCTCAGCTGTAGCTaGGGCCAACAATCTGCCAATTCTATGTTGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQPKKHAQLSCS*GQQSANSMLLK Trigger: CTTCAACAACATAGAATTGGCAGATTGTTGGCCCAAGCTACAGCTGAGCTGTGCGTGCTTCTTGGGTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
||
| CDS-3UTR GCA 90 bp | GTTGATTTTGGGAAAACCCTCCTGGGACAAGGATGTTTCCTAAGGTTATTGGGTCTACCACCATCACTGTaGGGCCACAGTTATCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: VDFGKTLLGQGCFLRLLGLPPSL*GHSYLP Trigger: GGGTAGATAACTGTGGCCGCACAGTGATGGTGGTAG...ACCCAATAACCTTAGGAAACATCCTTGTCCCAGGAGGGTTTTCCCAAAATCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTGATTTTGGGAAAACCCTCCTGGGACAAGGATGTTTCCTAAGGTTATTGATGGCAGAGAAGAGCTaGTGCAGGCTGTCTACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVDFGKTLLGQGCFLRLLMAEKS*CRLSTW Trigger: CCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCAT...CAATAACCTTAGGAAACATCCTTGTCCCAGGAGGGTTTTCCCAAAATCAACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTGTCCTTTAGGAAACTGGAGACACTCAAAAGTTGATCCCCAGTTTCTATCCACATCCACAAACTaGGAAGGTGCACCCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VQCPLGNWRHSKVDPQFLSTSTN*EGAPKG Trigger: TCCCTTGGGTGCACCTTCCCAGTTTGTGGATGTGGA...TAGAAACTGGGGATCAACTTTTGAGTGTCTCCAGTTTCCTAAAGGACACTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR CCA 90 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTATCCACATCCACAAACTaGGAAGGTGCACCCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NMLNDYPKAHGCCSAARLSTSTN*EGAPKG Trigger: TCCCTTGGGTGCACCTTCCCAGTTTGTGGATGTGGA...TAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTGAACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCAAGGCTGTCTACGTGGTaGATCTTGTCCTTCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVNMLNDYPKAHGCCSAARLSTW*ILSFSP Trigger: AGGACTGAAGGACAAGATCCACCACGTAGACAGCCT...TGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTTCACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGTGCAGGCTGTCTACGTaGTGGATCTTGTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLDLYSKNEHHSDRWRVVCRLST*WILSFS Trigger: ACTGAAGGACAAGATCCACCACGTAGACAGCCTGCA...CACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCTTTAGGAAACTGGAGACACTCAAAAGTTGATCCCCAGTTTCTATTAATGCTGGCCCCGCAAGCATaGAGATGCTCTCTGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: CPLGNWRHSKVDPQFLLMLAPQA*RCSLTQ Trigger: CTGTGTCAGAGAGCATCTTCATGCTTGCGGGGCCAG...CATTAATAGAAACTGGGGATCAACTTTTGAGTGTCTCCAGTTTCCTAAAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR TCA 90 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTATTAGGTCCCACTGTGTaGATGATGAACCGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NMLNDYPKAHGCCSAARLLGPTV*MMNRAA Trigger: AGCTGCTCGGTTCATCATTCACACAGTGGGACCTAA...TAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTGAACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACTTGTCCTTCAGTCCTaGGACAGAAAAGGTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVNMLNDYPKAHGCCSAALVLQS*DRKGGE Trigger: TTCACCACCTTTTCTGTCTCAGGACTGAAGGACAAG...TGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTTCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR TCA 90 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTAGGTAGGCATGTAGCATaGAACACACAAGCTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: NMLNDYPKAHGCCSAARLGRHVA*NTQAHT Trigger: GGTGTGAGCTTGTGTGTTTCATGCTACATGCCTACC...TAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGGATCTGAGGGAACAATGCATCCGTTTAGCATACATTGGTTCTATATACACGGGCTCCCCTTCTaGATTTCCAATGTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPGSEGTMHPFSIHWFYIHGLPF*ISNVCR Trigger: CCTGCAGACATTGGAAATGCAGAAGGGGAGCCCGTG...TATATAGAACCAATGTATGCTAAACGGATGCATTGTTCCCTCAGATCCTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR CCA 90 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTAGTCCTCCTTCAAATCTaGCCCCGCAAGCATGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NMLNDYPKAHGCCSAARLVLLQI*PRKHED Trigger: ATCTTCATGCTTGCGGGGCCAGATTTGAAGGAGGAC...TAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR CCA 90 bp | ATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGACAGATGAGCCAACAGAAGACATaGACTGTTCTTTTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MIIPKLMAVALQHAYRQMSQQKT*TVLLPA Trigger: AGCTGGCAAAAGAACAGTCCATGTCTTCTGTTGGCT...CATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGTCGCTGGTCAGTGTGTaGAAATACACCAGCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: SLDLYSKNEHHSDRWRVVSLVSV*KYTSTY Trigger: GTATGTGCTGGTGTATTTCCACACACTGACCAGCGA...CACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR CCA 90 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTATGCAGGCTGTCTACGTaGTGGATCTTGTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NMLNDYPKAHGCCSAARLCRLST*WILSFS Trigger: ACTGAAGGACAAGATCCACCACGTAGACAGCCTGCA...TAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTAGGCTGTCTACGTGGTaGATCTTGTCCTTCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDLYSKNEHHSDRWRVVVRLSTW*ILSFSL Trigger: AAGACTGAAGGACAAGATCCACCACGTAGACAGCCT...AACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
||
| CDS-3UTR TCA 90 bp | GTGAACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCAGACAGAAAAGGTGGTaGAAAACCATGTTGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: VNMLNDYPKAHGCCSAARRQKRW*KTMLRP Trigger: AGGTCTCAACATGGTTTTTCACCACCTTTTCTGTCT...GCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTGAGAAACACTTAAATACACAGAGAGAGCGTGCACTGTTTAAGAGATGCGCAGAGAAGAGCTGCTaGAGGCTGTCTACGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YFEKHLNTQRERALFKRCAEKSC*RLSTWW Trigger: CCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGC...GCATCTCTTAAACAGTGCACGCTCTCTCTGTGTATTTAAGTGTTTCTCAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
||
| CDS-3UTR CCA 90 bp | GATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTAAAGTCCTCCTTCAAATCTaGCCCCGCAAGCATGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLYSKNEHHSDRWRVVVKVLLQI*PRKHED Trigger: ATCTTCATGCTTGCGGGGCCAGATTTGAAGGAGGAC...TTTAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR CCA 90 bp | TGGGTGAACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCATCAGACAACTGTCCCTaGAGGATCAACTTTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WVNMLNDYPKAHGCCSAASDNCP*RINFLC Trigger: GCAAAGAAAGTTGATCCTCCAGGGACAGTTGTCTGA...TGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTTCACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTAAATGGAATCCTGTGAGGCTGTCTACGTGGTaGATCTTGTCCTTCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNEHHSDRWRVVVKWNPVRLSTW*ILSFSP Trigger: AGGACTGAAGGACAAGATCCACCACGTAGACAGCCT...CACAGGATTCCATTTAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| 3UTR CAA 72 bp | GTAGGCGACTCAAGTGATACTGAACCAACACAATCATaGATGACTCTGAGAAGACAGCAATGTGGTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGDSSDTEPTQS*MTLRRQQCGQG Trigger: TCCCTGACCACATTGCTGTCTTCTCAGAGTCATCAATGATTGTGTTGGTTCAGTATCACTTGAGTCGCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGAACCACTTTTCCATTaGCGTCCCGACTATAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SLDLYSKNEHHSDRWRVVEPLFH*RPDYKQ Trigger: TTGTTTATAGTCGGGACGTCAATGGAAAAGTGGTTC...CACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR TCA 90 bp | TGGGTGAACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCAGAACCACTTTTCCATTaGCGTCCCGACTATAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: WVNMLNDYPKAHGCCSAAEPLFH*RPDYKQ Trigger: TTGTTTATAGTCGGGACGTCAATGGAAAAGTGGTTC...TGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTTCACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR TCA 90 bp | TGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTACAGGGTTCTTATCTGTaGGGCTTTCATTGCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: WICTAKMNITPIGGELWLQGSYL*GFHCWY Trigger: ATACCAGCAATGAAAGCCTCACAGATAAGAACCCTG...TAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR TCA 90 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGGGTTCTTATCTGTaGGGCTTTCATTGCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NMLNDYPKAHGCCSAARLQGSYL*GFHCWY Trigger: ATACCAGCAATGAAAGCCTCACAGATAAGAACCCTG...TAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR TCA 90 bp | TGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTACATGAAGATGCTCTCTaGCACAGGGTTCTTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WICTAKMNITPIGGELWLHEDAL*HRVLIC Trigger: ACAGATAAGAACCCTGTGTCAGAGAGCATCTTCATG...TAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGATCCGAGCAAAAGCATaGGAGCCAATAAAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLDLYSKNEHHSDRWRVVIRAKA*EPIKDR Trigger: TCTGTCTTTTATTGGCTCTCATGCTTTTGCTCGGAT...CACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR TCA 90 bp | CTGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTAGACAGAAAAGGTGGTaGAAAACCATGTTGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LDLYSKNEHHSDRWRVVVRQKRW*KTMLRP Trigger: AGGTCTCAACATGGTTTTTCACCACCTTTTCTGTCT...AACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR GCA 90 bp | GTTGATTTTGGGAAAACCCTCCTGGGACAAGGATGTTTCCTAAGGTTATTGGGTCATGGACTGTTCTTTTaGCAGCTGAAGCACGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VDFGKTLLGQGCFLRLLGHGLFF*QLKHVS Trigger: AGAAACGTGCTTCAGCTGGCAAAAGAACAGTCCATG...ACCCAATAACCTTAGGAAACATCCTTGTCCCAGGAGGGTTTTCCCAAAATCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTGTCCTTTAGGAAACTGGAGACACTCAAAAGTTGATCCCCAGTTTCTAAGCCAACAGAAGACATaGACTGTTCTTTTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQCPLGNWRHSKVDPQFLSQQKT*TVLLPA Trigger: AGCTGGCAAAAGAACAGTCCATGTCTTCTGTTGGCT...TAGAAACTGGGGATCAACTTTTGAGTGTCTCCAGTTTCCTAAAGGACACTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR CCA 90 bp | AAAACCCTCCTGGGACAAGGATGTTTCCTAAGGTTATTGGGTGAACATGCTAAATCAATGTTTTCCCCATaGATCTCTAGGAACCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTLLGQGCFLRLLGEHAKSMFSP*ISRNRL Trigger: GAGGCGGTTCCTAGAGATCCATGGGGAAAACATTGA...TTTAGCATGTTCACCCAATAACCTTAGGAAACATCCTTGTCCCAGGAGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR CCA 90 bp | TGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTATCAGACAACTGTCCCTaGAGGATCAACTTTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WICTAKMNITPIGGELWLSDNCP*RINFLC Trigger: GCAAAGAAAGTTGATCCTCCAGGGACAGTTGTCTGA...TAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR CCA 90 bp | AAAACCCTCCTGGGACAAGGATGTTTCCTAAGGTTATTGGGTGAACATGCTAAATCGCTGGTCAGTGTGTaGAAATACACCAGCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: KTLLGQGCFLRLLGEHAKSLVSV*KYTSTY Trigger: GTATGTGCTGGTGTATTTCCACACACTGACCAGCGA...TTTAGCATGTTCACCCAATAACCTTAGGAAACATCCTTGTCCCAGGAGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR TCA 90 bp | AAAACCCTCCTGGGACAAGGATGTTTCCTAAGGTTATTGGGTGAACATGCTAAAGGCCTCTTCGAGTTCTaGGACAGCAAATACTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTLLGQGCFLRLLGEHAKGLFEF*DSKYYF Trigger: AAAGTAGTATTTGCTGTCTCAGAACTCGAAGAGGCC...TTTAGCATGTTCACCCAATAACCTTAGGAAACATCCTTGTCCCAGGAGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR TCA 90 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTAATCCGAGCAAAAGCATaGGAGCCAATAAAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NMLNDYPKAHGCCSAARLIRAKA*EPIKDR Trigger: TCTGTCTTTTATTGGCTCTCATGCTTTTGCTCGGAT...TAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR TCA 90 bp | ATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGACAGATGAATTCCTCTTGTATTTaGTGTCAACCACATCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MIIPKLMAVALQHAYRQMNSSCI*CQPHRR Trigger: TCTACGATGTGGTTGACATCAAATACAAGAGGAATT...CATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTGAGAAACACTTAAATACACAGAGAGAGCGTGCACTGTTTAAGAGATGCCTACCACCATCACTGTaGGGCCACAGTTATCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: YFEKHLNTQRERALFKRCLPPSL*GHSYLP Trigger: GGGTAGATAACTGTGGCCGCACAGTGATGGTGGTAG...GCATCTCTTAAACAGTGCACGCTCTCTCTGTGTATTTAAGTGTTTCTCAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR CCA 90 bp | TGTCCTTTAGGAAACTGGAGACACTCAAAAGTTGATCCCCAGTTTCTATTAATGTCAATGTTTTCCCCATaGATCTCTAGGAACCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPLGNWRHSKVDPQFLLMSMFSP*ISRNRL Trigger: GAGGCGGTTCCTAGAGATCCATGGGGAAAACATTGA...CATTAATAGAAACTGGGGATCAACTTTTGAGTGTCTCCAGTTTCCTAAAGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
||
| CDS-3UTR CCA 90 bp | ATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGACAGATGTTATCTACCCCTGTTTaGTATAAAGCTTTCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MIIPKLMAVALQHAYRQMLSTPV*YKAFRE Trigger: TTCTCTGAAAGCTTTATACCAAACAGGGGTAGATAA...CATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTGAGAAACACTTAAATACACAGAGAGAGCGTGCACTGTTTAAGAGATGCTGCAGGCTGTCTACGTaGTGGATCTTGTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YFEKHLNTQRERALFKRCCRLST*WILSFS Trigger: ACTGAAGGACAAGATCCACCACGTAGACAGCCTGCA...GCATCTCTTAAACAGTGCACGCTCTCTCTGTGTATTTAAGTGTTTCTCAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| CDS-3UTR TCA 90 bp | GTCCAGTGTCCTTTAGGAAACTGGAGACACTCAAAAGTTGATCCCCAGTTTCTATCCTTCACAGCAATGTaGTCCATTACATGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQCPLGNWRHSKVDPQFLSFTAM*SITWIK Trigger: TTTTATCCATGTAATGGATCACATTGCTGTGAAGGA...TAGAAACTGGGGATCAACTTTTGAGTGTCTCCAGTTTCCTAAAGGACACTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR TCA 90 bp | TGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTAAATTCCTCTTGTATTTaGTGTCAACCACATCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WICTAKMNITPIGGELWLNSSCI*CQPHRR Trigger: TCTACGATGTGGTTGACATCAAATACAAGAGGAATT...TAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR TCA 90 bp | AAAACCCTCCTGGGACAAGGATGTTTCCTAAGGTTATTGGGTGAACATGCTAAATCCTTCACAGCAATGTaGTCCATTACATGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTLLGQGCFLRLLGEHAKSFTAM*SITWIK Trigger: TTTTATCCATGTAATGGATCACATTGCTGTGAAGGA...TTTAGCATGTTCACCCAATAACCTTAGGAAACATCCTTGTCCCAGGAGGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS-3UTR GCA 90 bp | TATTTTGAGAAACACTTAAATACACAGAGAGAGCGTGCACTGTTTAAGAGATGCCATGGACTGTTCTTTTaGCAGCTGAAGCACGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFEKHLNTQRERALFKRCHGLFF*QLKHVS Trigger: AGAAACGTGCTTCAGCTGGCAAAAGAACAGTCCATG...GCATCTCTTAAACAGTGCACGCTCTCTCTGTGTATTTAAGTGTTTCTCAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CCA 90 bp | TGGAAAAGCCAGGTTCTTTCTAAATCCTATCTTTATGTTACCTCTGAGGTAGGTTGCTGGTATTCACAATaGCTGTGCAGTTCAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: WKSQVLSKSYLYVTSEVGCWYSQ*LCSSVM Trigger: CATTACTGAACTGCACAGCCATTGTGAATACCAGCA...ACCTACCTCAGAGGTAACATAAAGATAGGATTTAGAAAGAACCTGGCTTTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CCA 90 bp | GTCCAGTGTCCTTTAGGAAACTGGAGACACTCAAAAGTTGATCCCCAGTTTCTATTATCTACCCCTGTTTaGTATAAAGCTTTCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQCPLGNWRHSKVDPQFLLSTPV*YKAFRE Trigger: TTCTCTGAAAGCTTTATACCAAACAGGGGTAGATAA...TAGAAACTGGGGATCAACTTTTGAGTGTCTCCAGTTTCCTAAAGGACACTGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| 3UTR CAA 72 bp | AGCTGTAGCTTGGGCCAACAATCTGCCAATTCTATGTaGTTGAAGGTTTTTACAGTTTTGATCATACACATT | + |
|
Preference number: 4 (lower is better) Translates to: SCSLGQQSANSM*LKVFTVLIIHI Trigger: AATGTGTATGATCAAAACTGTAAAAACCTTCAACAACATAGAATTGGCAGATTGTTGGCCCAAGCTACAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000197797.2 |
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| CDS GCA 90 bp | CTCCGTGACACACCCATATGCTCACACCTGCTGCTGCGGCACACCTaGATACTACACCAGGCAAAGGAGGACAGGCACTTACCCTCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LRDTPICSHLLLRHT*ILHQAKEDRHLPSR Trigger: ACGCGAGGGTAAGTGCCTGTCCTCCTTTGCCTGGTGTAGTATGCAGGTGTGCCGCAGCAGCAGGTGTGAGCATATGGGTGTGTCACGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS GCA 90 bp | TCTTCATTGTCCTCCGAGGCACCGGGTTTCTCACTGATTCTAATTTaGCGCTCGGGCACCACGGGCTCCCCTTCTGCATTTCCAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLSSEAPGFSLILI*RSGTTGSPSAFPMS Trigger: AGACATTGGAAATGCAGAAGGGGAGCCCGTGGTGCCCGAGCGGCAAATTAGAATCAGTGAGAAACCCGGTGCCTCGGAGGACAATGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS GCA 90 bp | CAGCTGAAGCACGTTTCTGTAACAGCTGTACAGGGAACTCTCCGCTaGAGTGCGGTAGCGGCTCTTGTACTTAGGTCCCACTGTGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QLKHVSVTAVQGTLR*SAVAALVLRSHCVN Trigger: ATTCACACAGTGGGACCTAAGTACAAGAGCCGCTACCGCACTGCAGCGGAGAGTTCCCTGTACAGCTGTTACAGAAACGTGCTTCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS GCA 90 bp | GGAGGAAAGTCTATCTGCTCTGGTGATATGGCAGAGAAGAGCTGCTaGAGGCTGTCTACGTGGTGGATCTTGTCCTTCAGTCCTGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GGKSICSGDMAEKSC*RLSTWWILSFSPET Trigger: TGTCTCAGGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCAGATAGACTTTCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS TCA 90 bp | CCAAAGAACCACTTTTCCATTGACGTCCCGACTATAAACAAAAGGTaGTCTGCTGGCGTCTTCCTGGAAGGCCTCGGCAGTACTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKNHFSIDVPTINKR*SAGVFLEGLGSTVS Trigger: GCTGACAGTACTGCCGAGGCCTTCCAGGAAGACGCCAGCAGATCACCTTTTGTTTATAGTCGGGACGTCAATGGAAAAGTGGTTCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS GCA 90 bp | AAAGGAGGAAAGTCTATCTGCTCTGGTGATATGGCAGAGAAGAGCTaGTGCAGGCTGTCTACGTGGTGGATCTTGTCCTTCAGTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KGGKSICSGDMAEKS*CRLSTWWILSFSPE Trigger: CTCAGGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCAGATAGACTTTCCTCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS GCA 90 bp | GGAGGAAAGTCTATCTGCTCTGGTGATATGGCAGAGAAGAGCTGCTaGAGGCTGTCTACGTGGTGGATCTTGTCCTTCAGTCTTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGKSICSGDMAEKSC*RLSTWWILSFSLDV Trigger: GACATCAAGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCAGATAGACTTTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| CDS CCA 90 bp | TGCTCTGGTGATATGGCAGAGAAGAGCTGCTGCAGGCTGTCTACGTaGTGGATCTTGTCCTTCAGTCCTGAGACAGAAAAGGTGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CSGDMAEKSCCRLST*WILSFSPETEKVVK Trigger: TTTCACCACCTTTTCTGTCTCAGGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS CCA 90 bp | TGCTCTGGTGATATGGCAGAGAAGAGCTGCTGCAGGCTGTCTACGTaGTGGATCTTGTCCTTCAGTCTTGATGTCAACCACATCGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSGDMAEKSCCRLST*WILSFSLDVNHIVE Trigger: CTCTACGATGTGGTTGACATCAAGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| CDS TCA 90 bp | CGCGTCATATTCAAGGACAAAAGGAGGAAAGTCTATCTGCTCTGGTaGTATGGCAGAGAAGAGCTGCTGCAGGCTGTCTACGTGGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RVIFKDKRRKVYLLW*YGREELLQAVYVVD Trigger: ATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCAGATAGACTTTCCTCCTTTTGTCCTTGAATATGACGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS-3UTR CAA 90 bp | GATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGACAGATGCTCCTCGCTTGGCAGAATaGATGACACAGAAGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: DYPKAHGCCSAARLQTDAPRLAE*MTQKPT Trigger: TGTTGGCTTCTGTGTCATCAATTCTGCCAAGCGAGG...AGCATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS TCA 90 bp | AAGGTCCTCCTTCAAATCTGGCCCCGCAAGCATGAAGATGCTCTCTaGCACAGGGTTCTTATCTGTGAGGCTTTCATTGCTGGTATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KVLLQIWPRKHEDAL*HRVLICEAFIAGIH Trigger: GTGAATACCAGCAATGAAAGCCTCACAGATAAGAACCCTGTGTCAGAGAGCATCTTCATGCTTGCGGGGCCAGATTTGAAGGAGGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS GCA 90 bp | AAAGGAGGAAAGTCTATCTGCTCTGGTGATATGGCAGAGAAGAGCTaGTGCAGGCTGTCTACGTGGTGGATCTTGTCCTTCAGTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KGGKSICSGDMAEKS*CRLSTWWILSFSLD Trigger: ATCAAGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCAGATAGACTTTCCTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| CDS CCA 90 bp | TCTGGTGATATGGCAGAGAAGAGCTGCTGCAGGCTGTCTACGTGGTaGATCTTGTCCTTCAGTCTTGATGTCAACCACATCGTAGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGDMAEKSCCRLSTW*ILSFSLDVNHIVEF Trigger: AAACTCTACGATGTGGTTGACATCAAGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| CDS CCA 90 bp | CATATTCAAGGACAAAAGGAGGAAAGTCTATCTGCTCTGGTGATATaGCAGAGAAGAGCTGCTGCAGGCTGTCTACGTGGTGGATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HIQGQKEESLSALVI*QRRAAAGCLRGGSC Trigger: ACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCAGATAGACTTTCCTCCTTTTGTCCTTGAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS-3UTR CAA 90 bp | ATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTACAGACAGATGACAGGTCTTCAGATCTaGCTTGGCATAACCAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: MIIPKLMAVALQHAYRQMTGLQI*LGITSD Trigger: ATCGCTGGTTATGCCAAGCAAGATCTGAAGACCTGT...CATCTGTCTGTAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS-3UTR CAA 90 bp | AAGACACTCTACCGCACGCACCCCACTTCCCTCAATCCTCTGCATCCTGGAAAAGCCTTCAAATTCCTCTaGTATTTGATGTCAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: KTLYRTHPTSLNPLHPGKAFKFL*YLMSTT Trigger: TGTGGTTGACATCAAATACAAGAGGAATTTGAAGGC...TTTTCCAGGATGCAGAGGATTGAGGGAAGTGGGGTGCGTGCGGTAGAGTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CAA 90 bp | GTGAACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCGCGATTATAATTTCTTaGATGCTGCTTCTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VNMLNDYPKAHGCCSAARAIIIS*MLLLQG Trigger: GCCCTGCAGAAGCAGCATCAAAGAAATTATAATCGC...GCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS-3UTR CAA 90 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTATCTACGTGGTGGATCTaGTCCTTCAGTCCTGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: NMLNDYPKAHGCCSAARLSTWWI*SFSPET Trigger: TGTCTCAGGACTGAAGGACAAGATCCACCACGTAGA...TAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS TCA 90 bp | CTACGTGGTGGATCTTGTCCTTCAGTCCTGAGACAGAAAAGGTGGTaGAAAACCATGTTGAGACCTTTGAACGGAATGTTGGATGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: LRGGSCPSVLRQKRW*KTMLRPLNGMLDER Trigger: TCGTTCATCCAACATTCCGTTCAAAGGTCTCAACATGGTTTTTCACCACCTTTTCTGTCTCAGGACTGAAGGACAAGATCCACCACGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS GCA 90 bp | CTATCAGTGTCACAGGAATGTTTCTTCCAACTACCACCATCACTGTaGGGCCACAGTTATCTACCCCTGTTTGGTATAAAGCTTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSVSQECFFQLPPSL*GHSYLPLFGIKLSE Trigger: CTCTGAAAGCTTTATACCAAACAGGGGTAGATAACTGTGGCCGCACAGTGATGGTGGTAGTTGGAAGAAACATTCCTGTGACACTGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS-3UTR CAA 90 bp | CTGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTTCTGTGAGGCTTTCATaGCTGGTATTCACAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LDLYSKNEHHSDRWRVVVSVRLS*LVFTMA Trigger: AGCCATTGTGAATACCAGCAATGAAAGCCTCACAGA...AACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CAA 90 bp | TGGGTGAACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCATCTGTGAGGCTTTCATaGCTGGTATTCACAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WVNMLNDYPKAHGCCSAASVRLS*LVFTMA Trigger: AGCCATTGTGAATACCAGCAATGAAAGCCTCACAGA...TGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTTCACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS-3UTR CAA 90 bp | TCTAAATTTCACTCACTAAGGCACACACAGAGCCTGAATGGCAAATGTTTTGTGCCTCGCTTGGCAGAATaGATGACACAGAAGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SKFHSLRHTQSLNGKCFVPRLAE*MTQKPT Trigger: TGTTGGCTTCTGTGTCATCAATTCTGCCAAGCGAGG...CACAAAACATTTGCCATTCAGGCTCTGTGTGTGCCTTAGTGAGTGAAATTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CAA 90 bp | GTATTAAAGCCAGGATCTGAGGGAACAATGCATCCGTTTAGCATACATTGGTTCCCTCCTTTAATGACCTaGGGAAGTACAGAGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLKPGSEGTMHPFSIHWFPPLMT*GSTEVA Trigger: TGCTACCTCTGTACTTCCCAAGGTCATTAAAGGAGG...GAACCAATGTATGCTAAACGGATGCATTGTTCCCTCAGATCCTGGCTTTAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CAA 90 bp | TGGATCTGTACAGCAAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTAGCGATTATAATTTCTTaGATGCTGCTTCTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WICTAKMNITPIGGELWLAIIIS*MLLLQG Trigger: GCCCTGCAGAAGCAGCATCAAAGAAATTATAATCGC...TAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTTGCTGTACAGATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CAA 90 bp | AAAAATGAACATCACTCCGATAGGTGGCGAGTTGTGGTTAAATGGAATCCTGTGTCTACGTGGTGGATCTaGTCCTTCAGTCTTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: KNEHHSDRWRVVVKWNPVSTWWI*SFSLDV Trigger: GACATCAAGACTGAAGGACAAGATCCACCACGTAGA...CACAGGATTCCATTTAACCACAACTCGCCACCTATCGGAGTGATGTTCATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| CDS-3UTR CAA 90 bp | CTGCATCCTGGAAAAGCCAGGTTCTTTCTAAATCCTATCTTTATGTTACCTCTGACAGGTCTTCAGATCTaGCTTGGCATAACCAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHPGKARFFLNPIFMLPLTGLQI*LGITSD Trigger: ATCGCTGGTTATGCCAAGCAAGATCTGAAGACCTGT...CAGAGGTAACATAAAGATAGGATTTAGAAAGAACCTGGCTTTTCCAGGATGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CAA 90 bp | TGGAAAAGCCAGGTTCTTTCTAAATCCTATCTTTATGTTACCTCTGAGGTAGGTTCTACGTGGTGGATCTaGTCCTTCAGTCCTGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: WKSQVLSKSYLYVTSEVGSTWWI*SFSPET Trigger: TGTCTCAGGACTGAAGGACAAGATCCACCACGTAGA...ACCTACCTCAGAGGTAACATAAAGATAGGATTTAGAAAGAACCTGGCTTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CAA 90 bp | ACACAATCATTGATGACTCTGAGAAGACAGCAATGTGGTCAGGGATGGAGTCCTATCAACTTTCTTTGCTaGTCAATATCTCCTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TQSLMTLRRQQCGQGWSPINFLC*SISPSI Trigger: GATGGAAGGAGATATTGACAAGCAAAGAAAGTTGAT...AGGACTCCATCCCTGACCACATTGCTGTCTTCTCAGAGTCATCAATGATTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029459.10 |
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| CDS-3UTR CAA 90 bp | GTTGATTTTGGGAAAACCCTCCTGGGACAAGGATGTTTCCTAAGGTTATTGGGTGCCTTCAAATTCCTCTaGTATTTGATGTCAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: VDFGKTLLGQGCFLRLLGAFKFL*YLMSTT Trigger: TGTGGTTGACATCAAATACAAGAGGAATTTGAAGGC...ACCCAATAACCTTAGGAAACATCCTTGTCCCAGGAGGGTTTTCCCAAAATCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS-3UTR CAA 90 bp | AACATGCTAAATGATTATCCCAAAGCTCATGGCTGTTGCTCTGCAGCACGCTTAATCAACTTTCTTTGCTaGTCAATATCTCCTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: NMLNDYPKAHGCCSAARLINFLC*SISPSI Trigger: GATGGAAGGAGATATTGACAAGCAAAGAAAGTTGAT...TAAGCGTGCTGCAGAGCAACAGCCATGAGCTTTGGGATAATCATTTAGCATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS GCA 72 bp | CGCTCCGTGACACACCCATATGCTCACACCTGCTGCTaGGGCACACCTGCATACTACACCAGGCAAAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSVTHPYAHTCC*GTPAYYTRQRR Trigger: CCTCCTTTGCCTGGTGTAGTATGCAGGTGTGCCGCAGCAGCAGGTGTGAGCATATGGGTGTGTCACGGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS GCA 72 bp | TGCCGCTCCGTGACACACCCATATGCTCACACCTGCTaGTGCGGCACACCTGCATACTACACCAGGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRSVTHPYAHTC*CGTPAYYTRQR Trigger: CCTTTGCCTGGTGTAGTATGCAGGTGTGCCGCAGCAGCAGGTGTGAGCATATGGGTGTGTCACGGAGCGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS CAA 72 bp | GTCCTCCGAGGCACCGGGTTTCTCACTGATTCTAATTaGCCGCTCGGGCACCACGGGCTCCCCTTCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: VLRGTGFLTDSN*PLGHHGLPFCI Trigger: AATGCAGAAGGGGAGCCCGTGGTGCCCGAGCGGCAAATTAGAATCAGTGAGAAACCCGGTGCCTCGGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS GCA 72 bp | TCCTCCGAGGCACCGGGTTTCTCACTGATTCTAATTTaGCGCTCGGGCACCACGGGCTCCCCTTCTGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SSEAPGFSLILI*RSGTTGSPSAF Trigger: AAATGCAGAAGGGGAGCCCGTGGTGCCCGAGCGGCAAATTAGAATCAGTGAGAAACCCGGTGCCTCGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
||
| CDS GCA 72 bp | ACAAGCTCACACCTGCCGCTCCGTGACACACCCATATaGTCACACCTGCTGCTGCGGCACACCTGCATACTA | + |
|
Preference number: 6 (lower is better) Translates to: TSSHLPLRDTPI*SHLLLRHTCIL Trigger: TAGTATGCAGGTGTGCCGCAGCAGCAGGTGTGAGCATATGGGTGTGTCACGGAGCGGCAGGTGTGAGCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
||
| CDS CAA 90 bp | CTCTTCATTGTCCTCCGAGGCACCGGGTTTCTCACTGATTCTAATTaGCCGCTCGGGCACCACGGGCTCCCCTTCTGCATTTCCAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: LFIVLRGTGFLTDSN*PLGHHGLPFCISNV Trigger: GACATTGGAAATGCAGAAGGGGAGCCCGTGGTGCCCGAGCGGCAAATTAGAATCAGTGAGAAACCCGGTGCCTCGGAGGACAATGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS GCA 72 bp | CACGTTTCTGTAACAGCTGTACAGGGAACTCTCCGCTaGAGTGCGGTAGCGGCTCTTGTACTTAGGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: HVSVTAVQGTLR*SAVAALVLRSH Trigger: GTGGGACCTAAGTACAAGAGCCGCTACCGCACTGCAGCGGAGAGTTCCCTGTACAGCTGTTACAGAAACGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS GCA 72 bp | ACACCCATATGCTCACACCTGCTGCTGCGGCACACCTaGATACTACACCAGGCAAAGGAGGACAGGCACTTA | + |
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Preference number: 6 (lower is better) Translates to: TPICSHLLLRHT*ILHQAKEDRHL Trigger: TAAGTGCCTGTCCTCCTTTGCCTGGTGTAGTATGCAGGTGTGCCGCAGCAGCAGGTGTGAGCATATGGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106997.2 |
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| CDS CCA 72 bp | ATGGCAGAGAAGAGCTGCTGCAGGCTGTCTACGTGGTaGATCTTGTCCTTCAGTCCTGAGACAGAAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: MAEKSCCRLSTW*ILSFSPETEKV Trigger: CACCTTTTCTGTCTCAGGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS CAA 90 bp | CTGCAGGGCGGCTTCAGACAACTGTCCCTGGAGGATCAACTTTCTTaGCTTGTCAATATCTCCTTCCATCCGAGCAAAAGCATGAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LQGGFRQLSLEDQLS*LVNISFHPSKSMRA Trigger: GGCTCTCATGCTTTTGCTCGGATGGAAGGAGATATTGACAAGCAAAGAAAGTTGATCCTCCAGGGACAGTTGTCTGAAGCCGCCCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS TCA 72 bp | CACTTTTCCATTGACGTCCCGACTATAAACAAAAGGTaGTCTGCTGGCGTCTTCCTGGAAGGCCTCGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: HFSIDVPTINKR*SAGVFLEGLGS Trigger: ACTGCCGAGGCCTTCCAGGAAGACGCCAGCAGATCACCTTTTGTTTATAGTCGGGACGTCAATGGAAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS GCA 72 bp | TCTATCTGCTCTGGTGATATGGCAGAGAAGAGCTGCTaGAGGCTGTCTACGTGGTGGATCTTGTCCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SICSGDMAEKSC*RLSTWWILSFS Trigger: ACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCAGATAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 ENSMUST00000197797.2 |
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| CDS GCA 72 bp | AAGTCTATCTGCTCTGGTGATATGGCAGAGAAGAGCTaGTGCAGGCTGTCTACGTGGTGGATCTTGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KSICSGDMAEKS*CRLSTWWILSF Trigger: GAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCAGATAGACTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 ENSMUST00000197797.2 |
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| CDS CCA 72 bp | GATATGGCAGAGAAGAGCTGCTGCAGGCTGTCTACGTaGTGGATCTTGTCCTTCAGTCCTGAGACAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: DMAEKSCCRLST*WILSFSPETEK Trigger: CTTTTCTGTCTCAGGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS CCA 72 bp | ATGGCAGAGAAGAGCTGCTGCAGGCTGTCTACGTGGTaGATCTTGTCCTTCAGTCTTGATGTCAACCACATC | + |
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Preference number: 6 (lower is better) Translates to: MAEKSCCRLSTW*ILSFSLDVNHI Trigger: GATGTGGTTGACATCAAGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| CDS CCA 72 bp | GATATGGCAGAGAAGAGCTGCTGCAGGCTGTCTACGTaGTGGATCTTGTCCTTCAGTCTTGATGTCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: DMAEKSCCRLST*WILSFSLDVNH Trigger: GTGGTTGACATCAAGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| CDS CAA 72 bp | GAGAAGAGCTGCTGCAGGCTGTCTACGTGGTGGATCTaGTCCTTCAGTCCTGAGACAGAAAAGGTGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: EKSCCRLSTWWI*SFSPETEKVVK Trigger: TTTCACCACCTTTTCTGTCTCAGGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS CAA 72 bp | GAGAAGAGCTGCTGCAGGCTGTCTACGTGGTGGATCTaGTCCTTCAGTCTTGATGTCAACCACATCGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: EKSCCRLSTWWI*SFSLDVNHIVE Trigger: CTCTACGATGTGGTTGACATCAAGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197797.2 |
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| CDS CCA 72 bp | TGCTGCTTCTGCAGGGCGGCTTCAGACAACTGTCCCTaGAGGATCAACTTTCTTTGCTTGTCAATATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CCFCRAASDNCP*RINFLCLSISP Trigger: AGGAGATATTGACAAGCAAAGAAAGTTGATCCTCCAGGGACAGTTGTCTGAAGCCGCCCTGCAGAAGCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS CAA 90 bp | GATATGGCAGAGAAGAGCTGCTGCAGGCTGTCTACGTGGTGGATCTaGTCCTTCAGTCCTGAGACAGAAAAGGTGGTGAAAAACCATGTT | + |
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Preference number: 6 (lower is better) Translates to: DMAEKSCCRLSTWWI*SFSPETEKVVKNHV Trigger: AACATGGTTTTTCACCACCTTTTCTGTCTCAGGACTGAAGGACAAGATCCACCACGTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS TCA 72 bp | CTTCAAATCTGGCCCCGCAAGCATGAAGATGCTCTCTaGCACAGGGTTCTTATCTGTGAGGCTTTCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: LQIWPRKHEDAL*HRVLICEAFIA Trigger: AGCAATGAAAGCCTCACAGATAAGAACCCTGTGTCAGAGAGCATCTTCATGCTTGCGGGGCCAGATTTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS TCA 72 bp | TTCAAGGACAAAAGGAGGAAAGTCTATCTGCTCTGGTaGTATGGCAGAGAAGAGCTGCTGCAGGCTGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: FKDKRRKVYLLW*YGREELLQAVY Trigger: GTAGACAGCCTGCAGCAGCTCTTCTCTGCCATATCACCAGAGCAGATAGACTTTCCTCCTTTTGTCCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS TCA 72 bp | GGATCTTGTCCTTCAGTCCTGAGACAGAAAAGGTGGTaGAAAACCATGTTGAGACCTTTGAACGGAATGTTG | + |
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Preference number: 6 (lower is better) Translates to: GSCPSVLRQKRW*KTMLRPLNGML Trigger: CAACATTCCGTTCAAAGGTCTCAACATGGTTTTTCACCACCTTTTCTGTCTCAGGACTGAAGGACAAGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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| CDS CAA 90 bp | GGTATAAAGCTTTCAGAGAAGCAATATCAGACAGGTCTTCAGATCTaGCTTGGCATAACCAGCGATTATAATTTCTTTGATGCTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GIKLSEKQYQTGLQI*LGITSDYNFFDAAS Trigger: AGAAGCAGCATCAAAGAAATTATAATCGCTGGTTATGCCAAGCAAGATCTGAAGACCTGTCTGATATTGCTTCTCTGAAAGCTTTATACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029459.10 ENSMUST00000106997.2 |
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