Pregenerated sensors for GDAP1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017943Ensembl transcript IDs: ENSMUST00000018087.13, ENSMUST00000109420.10, ENSMUST00000109421.10, ENSMUST00000137070.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCCAGCACCTCCCAGAACCTGGGCCCTGCTGGGTGGAACATTCTaGGACTCACCTCAGATGCTAACCAGTCCCCACAGTAACGTCTTG | + |
|
Preference number: 1 (lower is better) Translates to: SPAPPRTWALLGGTF*DSPQMLTSPHSNVL Trigger: CAAGACGTTACTGTGGGGACTGGTTAGCATCTGAGGTGAGTCCCAGAATGTTCCACCCAGCAGGGCCCAGGTTCTGGGAGGTGCTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| 3UTR TCA 90 bp | ACGGGGACTCTGGCTCTCCAGGCCCAGACAGAGGTACTGGTTAGATaGGTTGGGTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCT | + |
|
Preference number: 1 (lower is better) Translates to: TGTLALQAQTEVLVR*VGSPGWLCPIEEVP Trigger: AGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAGCCAGAGTCCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR TCA 90 bp | ATGGCCGCCTTGCCAGGTGAGCTTGATCTTCGGAAGAGCTGGATCTaGAACCTCGCACCTCCAGCCCTCTGTCCTGACTTTGGAAATGAG | + |
|
Preference number: 1 (lower is better) Translates to: MAALPGELDLRKSWI*NLAPPALCPDFGNE Trigger: CTCATTTCCAAAGTCAGGACAGAGGGCTGGAGGTGCGAGGTTTCAGATCCAGCTCTTCCGAAGATCAAGCTCACCTGGCAAGGCGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| 3UTR TCA 90 bp | GTTGATCCCAGCCAGAGATGGGTTTTAGGGTGCCACTGCTTGGCTTaGGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACC | + |
|
Preference number: 1 (lower is better) Translates to: VDPSQRWVLGCHCLA*ATAVSVHVQEKNET Trigger: GGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGCAGTGGCACCCTAAAACCCATCTCTGGCTGGGATCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR CCA 90 bp | AGAATGAGACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTaGCTCTCCAGGCCCAGACAGAGGTACTGGTTAGATGAGTTGGGT | + |
|
Preference number: 1 (lower is better) Translates to: RMRPLLVFRDFPRGL*LSRPRQRYWLDELG Trigger: ACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTCTCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR TCA 90 bp | CTAGGAAGAAGGGGCAGGAAGGTCTGTCCAGTGCTCATGGGACAGTaGGTAACTGAGCAGGATTTGGGAAGCACACAGCACAGAGACACT | + |
|
Preference number: 1 (lower is better) Translates to: LGRRGRKVCPVLMGQ*VTEQDLGSTQHRDT Trigger: AGTGTCTCTGTGCTGTGTGCTTCCCAAATCCTGCTCAGTTACTCACTGTCCCATGAGCACTGGACAGACCTTCCTGCCCCTTCTTCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR TCA 90 bp | AACCTCGCACCTCCAGCCCTCTGTCCTGACTTTGGAAATGAGAGTTaGGTAGGACCACACGGTTTAGAAATGAAAAGCAATCGCTCCTCC | + |
|
Preference number: 1 (lower is better) Translates to: NLAPPALCPDFGNES*VGPHGLEMKSNRSS Trigger: GGAGGAGCGATTGCTTTTCATTTCTAAACCGTGTGGTCCTACTCAACTCTCATTTCCAAAGTCAGGACAGAGGGCTGGAGGTGCGAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| 3UTR-3UTR TCA 90 bp | GCACAGGAAAGTGAGACCCGGGGAGCAGTGTGGAGGAGAGACCCCACTGCATGCTGCCACTGCTTGGCTTaGGCCACTGCTGTCTCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: AQESETRGAVWRRDPTACCHCLA*ATAVSV Trigger: GACTGAGACAGCAGTGGCTCAAGCCAAGCAGTGGCA...GCATGCAGTGGGGTCTCTCCTCCACACTGCTCCCCGGGTCTCACTTTCCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CCA 90 bp | GCACAGGAAAGTGAGACCCGGGGAGCAGTGTGGAGGAGAGACCCCACTGCATGCCCAACCCTCACCAGCTaGCCAATGAGGAGGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AQESETRGAVWRRDPTACPTLTS*PMRRKG Trigger: CCCTTTCCTCCTCATTGGCCAGCTGGTGAGGGTTGG...GCATGCAGTGGGGTCTCTCCTCCACACTGCTCCCCGGGTCTCACTTTCCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR CAA 90 bp | GGAGACCGTGAGGGACGCACCCCTGTTCTTGAGCTGAGAATGACCTaGGGAGGGAAGGTCAACATGGCTTTTGCTGAGAGGCCCACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GDREGRTPVLELRMT*GGKVNMAFAERPTR Trigger: CCTGGTGGGCCTCTCAGCAAAAGCCATGTTGACCTTCCCTCCCAAGGTCATTCTCAGCTCAAGAACAGGGGTGCGTCCCTCACGGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCCAGGCCCAGACAGAGGTACTGGTTAGATGAGTTGGGTCTCCAGGTTGGCACAGCACAGAGACACTaGCAGTCACACACCAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LSRPRQRYWLDELGLQVGTAQRH*QSHTRP Trigger: GGGCCTGGTGTGTGACTGGCAGTGTCTCTGTGCTGT...GCCAACCTGGAGACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGAGACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCCTGGGCCCTGCTGGGTaGAACATTCTGGGACTCACC | + |
|
Preference number: 2 (lower is better) Translates to: RMRPLLVFRDFPRGLWLSLGPAG*NILGLT Trigger: GGTGAGTCCCAGAATGTTCCACCCAGCAGGGCCCAG...GGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTCTCATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| 3UTR-3UTR CCA 90 bp | CTGGATGCTTTATTGGGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTTTTCCACGGGGACTCTaGCTCTCCAGGCCCAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: LDALLGTLSMSGSDTQTLFPRGL*LSRPRQ Trigger: CTGTCTGGGCCTGGAGAGCCAGAGTCCCCGTGGAAA...AAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAATAAAGCATCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CCA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGTTTCCACGGGGACTCTaGCTCTCCAGGCCCAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLFPRGL*LSRPRQ Trigger: CTGTCTGGGCCTGGAGAGCCAGAGTCCCCGTGGAAA...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCTTCAGAGGTGGAGACCGTGAGGGACGCACCCCTGTTCTTGAGCTGAGAATGGATCCCAGCCAGAGATaGGTTTTAGGGTGCCACTGC | + |
|
Preference number: 2 (lower is better) Translates to: TFRGGDREGRTPVLELRMDPSQR*VLGCHC Trigger: GCAGTGGCACCCTAAAACCCATCTCTGGCTGGGATC...CATTCTCAGCTCAAGAACAGGGGTGCGTCCCTCACGGTCTCCACCTCTGAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR TCA 90 bp | CAGAAGCTTCTTGCGGCAGGCGATCTGTCTCTGTCCTTCTGTCCTTCCTTGGCCGGGACAGTGAGTAACTaGGCAGGATTTGGGAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: QKLLAAGDLSLSFCPSLAGTVSN*AGFGKH Trigger: GTGCTTCCCAAATCCTGCTCAGTTACTCACTGTCCC...GGCCAAGGAAGGACAGAAGGACAGAGACAGATCGCCTGCCGCAAGAAGCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| 3UTR-3UTR GCA 90 bp | AGAATGAGACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCTATAGAAGAGGTCCCTaGCAAGAGGGAACGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: RMRPLLVFRDFPRGLWLSYRRGP*QEGTGG Trigger: GCCTCCCGTTCCCTCTTGGCAGGGACCTCTTCTATA...GGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTCTCATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| 3UTR-3UTR CCA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGAACCTGGGCCCTGCTaGGTGGAACATTCTGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLEPGPC*VEHSGT Trigger: AGTCCCAGAATGTTCCACCCAGCAGGGCCCAGGTTC...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCCAGGCCCAGACAGAGGTACTGGTTAGATGAGTTGGGTCTCCAGGTTGGCGTGCTCATGGGACAGTaGGTAACTGAGCAGGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: LSRPRQRYWLDELGLQVGVLMGQ*VTEQDL Trigger: CAAATCCTGCTCAGTTACTCACTGTCCCATGAGCAC...GCCAACCTGGAGACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR GCA 90 bp | CAGAAGCTTCTTGCGGCAGGCGATCTGTCTCTGTCCTTCTGTCCTTCCTTGGCCAGAGACCCCACTGCATaGAGTATGAGGAGTTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QKLLAAGDLSLSFCPSLARDPTA*SMRSFW Trigger: CCAGAAACTCCTCATACTGCATGCAGTGGGGTCTCT...GGCCAAGGAAGGACAGAAGGACAGAGACAGATCGCCTGCCGCAAGAAGCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| 3UTR-3UTR CCA 90 bp | CTGGATGCTTTATTGGGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTCTGGGTGGAACATTCTaGGACTCACCTCAGATGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LDALLGTLSMSGSDTQTLLGGTF*DSPQML Trigger: TAGCATCTGAGGTGAGTCCCAGAATGTTCCACCCAG...AAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAATAAAGCATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| 3UTR CAA 90 bp | GGTACCCAAATGCATAAGTGGACTTATGACCATGTCAGAAGCTTCTaGCGGCAGGCGATCTGTCTCTGTCCTTCTGTCCTTCCTTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GTQMHKWTYDHVRSF*RQAICLCPSVLPWP Trigger: AGGCCAAGGAAGGACAGAAGGACAGAGACAGATCGCCTGCCGCAAGAAGCTTCTGACATGGTCATAAGTCCACTTATGCATTTGGGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCCAGGCCCAGACAGAGGTACTGGTTAGATGAGTTGGGTCTCCAGGTTGGCCTCAAATCACGGCGTTaGCAATGTCTACTTCTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSRPRQRYWLDELGLQVGLKSRR*QCLLLN Trigger: GTTTAGAAGTAGACATTGTCAACGCCGTGATTTGAG...GCCAACCTGGAGACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCTTCAGAGGTGGAGACCGTGAGGGACGCACCCCTGTTCTTGAGCTGAGAATGCCCACAGTAACGTCTTaGGTCTTTGAATCAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TFRGGDREGRTPVLELRMPTVTS*VFESEE Trigger: TTCTTCTGATTCAAAGACTCAAGACGTTACTGTGGG...CATTCTCAGCTCAAGAACAGGGGTGCGTCCCTCACGGTCTCCACCTCTGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR GCA 90 bp | TGGTCAACCCCGAAGAGCAGAGGTAAGCAAATGGATGTAAACACACTCTGTAAGACAGCACAGAGACACTaGCAGTCACACACCAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: WSTPKSRGKQMDVNTLCKTAQRH*QSHTRP Trigger: GGGCCTGGTGTGTGACTGGCAGTGTCTCTGTGCTGT...CTTACAGAGTGTGTTTACATCCATTTGCTTACCTCTGCTCTTCGGGGTTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| 3UTR-3UTR GCA 90 bp | GACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCAGGCCCAAAAAGACATTTGGATTaGCTTTCTCTCGCTTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: DPFWSSETFHGDSGSPGPKRHLD*LSLAFS Trigger: AGAGAAAGCGAGAGAAAGGCAATCCAAATGTCTTTT...TGGGCCTGGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR TCA 90 bp | GTCACACTGACAATAGAATTACTAGGAAGAAGGGGCAGGAAGGTCTGTCCAGTGGGGACAGTGAGTAACTaGGCAGGATTTGGGAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: VTLTIELLGRRGRKVCPVGTVSN*AGFGKH Trigger: GTGCTTCCCAAATCCTGCTCAGTTACTCACTGTCCC...CACTGGACAGACCTTCCTGCCCCTTCTTCCTAGTAATTCTATTGTCAGTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR CAA 90 bp | ACACGGTTTAGAAATGAAAAGCAATCGCTCCTCCTGGATGCTTTATaGGGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TRFRNEKQSLLLDAL*GTLSMSGSDTQTLS Trigger: AGAAAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAATAAAGCATCCAGGAGGAGCGATTGCTTTTCATTTCTAAACCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| 3UTR-3UTR TCA 90 bp | CTGGATGCTTTATTGGGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTCTCAAATCACGGCGTTaGCAATGTCTACTTCTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LDALLGTLSMSGSDTQTLLKSRR*QCLLLN Trigger: GTTTAGAAGTAGACATTGTCAACGCCGTGATTTGAG...AAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAATAAAGCATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR GCA 90 bp | GCCACTGCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAAAAGACATTTGGATTaGCTTTCTCTCGCTTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ATAWLEPLLSQSMSRRRMKRHLD*LSLAFS Trigger: AGAGAAAGCGAGAGAAAGGCAATCCAAATGTCTTTT...CATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGCAGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGAGACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCAGAAGAAAAGACATTTaGATTGCCTTTCTCTCGCTT | + |
|
Preference number: 2 (lower is better) Translates to: RMRPLLVFRDFPRGLWLSRRKDI*IAFLSL Trigger: AAGCGAGAGAAAGGCAATCCAAATGTCTTTTCTTCT...GGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTCTCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTGTTCTTGAGCTGAGAATGACCTTGGGAGGGAAGGTCAACATGGCTTTTGCTCCCACAGTAACGTCTTaGGTCTTTGAATCAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PVLELRMTLGGKVNMAFAPTVTS*VFESEE Trigger: TTCTTCTGATTCAAAGACTCAAGACGTTACTGTGGG...AGCAAAAGCCATGTTGACCTTCCCTCCCAAGGTCATTCTCAGCTCAAGAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CCA 90 bp | GCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGTCTTAGAAGAAAAGACATTTaGATTGCCTTTCTCTCGCTT | + |
|
Preference number: 2 (lower is better) Translates to: ATAVSVHVQEKNETPSGLRRKDI*IAFLSL Trigger: AAGCGAGAGAAAGGCAATCCAAATGTCTTTTCTTCT...AAGACCAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR GCA 72 bp | CCTCTGAGTCCCCAGCACCTCCCAGAACCTGGGCCCTaGTGGGTGGAACATTCTGGGACTCACCTCAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: PLSPQHLPEPGP*WVEHSGTHLRC Trigger: GCATCTGAGGTGAGTCCCAGAATGTTCCACCCAGCAGGGCCCAGGTTCTGGGAGGTGCTGGGGACTCAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| 3UTR GCA 72 bp | GTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTaGCAAGAGGGAACGGGAGGCTGGGGTCAGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSRLALSYRRGP*QEGTGGWGQAL Trigger: GAGGGCCTGACCCCAGCCTCCCGTTCCCTCTTGGCAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| 3UTR CCA 72 bp | CCTCCCAGAACCTGGGCCCTGCTGGGTGGAACATTCTaGGACTCACCTCAGATGCTAACCAGTCCCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: PPRTWALLGGTF*DSPQMLTSPHS Trigger: ACTGTGGGGACTGGTTAGCATCTGAGGTGAGTCCCAGAATGTTCCACCCAGCAGGGCCCAGGTTCTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| 3UTR CCA 72 bp | CGGGGACTCTGGCTCTCCAGGCCCAGACAGAGGTACTaGTTAGATGAGTTGGGTCTCCAGGTTGGCTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RGLWLSRPRQRY*LDELGLQVGFV Trigger: GACAAAGCCAACCTGGAGACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAGCCAGAGTCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR CCA 72 bp | CCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTaGCTCTCCAGGCCCAGACAGAGGTACTGGTTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PLLVFRDFPRGL*LSRPRQRYWLD Trigger: ATCTAACCAGTACCTCTGTCTGGGCCTGGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTTCTCAACATGCAGTGCCACTGCTTGGCTaGAGCCACTGCTGTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGTLSMSGSDTQTLSQHAVPLLG*SHCCLS Trigger: ACTGAGACAGCAGTGGCTCAAGCCAAGCAGTGGCAC...TGCATGTTGAGAAAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR TCA 72 bp | AGGGGCAGGAAGGTCTGTCCAGTGCTCATGGGACAGTaGGTAACTGAGCAGGATTTGGGAAGCACACAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RGRKVCPVLMGQ*VTEQDLGSTQH Trigger: GTGCTGTGTGCTTCCCAAATCCTGCTCAGTTACTCACTGTCCCATGAGCACTGGACAGACCTTCCTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR TCA 72 bp | AGCCAGAGATGGGTTTTAGGGTGCCACTGCTTGGCTTaGGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQRWVLGCHCLA*ATAVSVHVQEK Trigger: CTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGCAGTGGCACCCTAAAACCCATCTCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTTCTCAACATGCAAGGTCAACATGGCTTTaGCTGAGAGGCCCACCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGTLSMSGSDTQTLSQHARSTWL*LRGPPG Trigger: TCCTGGTGGGCCTCTCAGCAAAAGCCATGTTGACCT...TGCATGTTGAGAAAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR TCA 72 bp | AGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATaGGACCCCTTCTGGTCTTCAGAGACTTTCCACGGG | + |
|
Preference number: 3 (lower is better) Translates to: SHCCLSPCPGEE*DPFWSSETFHG Trigger: CCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR TCA 72 bp | AATGACCTTGGGAGGGAAGGTCAACATGGCTTTTGCTaGGAGGCCCACCAGGAAGGGTGGGAACTCAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: NDLGREGQHGFC*EAHQEGWELNS Trigger: TGAGTTGAGTTCCCACCCTTCCTGGTGGGCCTCTCAGCAAAAGCCATGTTGACCTTCCCTCCCAAGGTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CAA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGTAACTGAGCAGGATTaGGGAAGCACACAGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLVTEQD*GSTQHR Trigger: TCTGTGCTGTGTGCTTCCCAAATCCTGCTCAGTTAC...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCAGTTGGGTCTCCAGGTaGGCTTTGTCCTATAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AWLEPLLSQSMSRRRMRPSWVSR*ALSYRR Trigger: TCTTCTATAGGACAAAGCCAACCTGGAGACCCAACT...GGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR GCA 72 bp | TGCATAAGTGGACTTATGACCATGTCAGAAGCTTCTTaGGGCAGGCGATCTGTCTCTGTCCTTCTGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CISGLMTMSEAS*GRRSVSVLLSF Trigger: GAAGGACAGAAGGACAGAGACAGATCGCCTGCCGCAAGAAGCTTCTGACATGGTCATAAGTCCACTTATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGTCTTCAGAAGAAAAGACATTaGGATTGCCTTTCTCTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: ATAVSVHVQEKNETPSGLQKKRH*DCLSLA Trigger: AGCGAGAGAAAGGCAATCCAAATGTCTTTTCTTCTG...AAGACCAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGTCACACTGACAATAGAATTACTAGGAAGAAGGGGCAGGAAGGTCTGTCCGTAACTGAGCAGGATTaGGGAAGCACACAGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: CCHTDNRITRKKGQEGLSVTEQD*GSTQHR Trigger: TCTGTGCTGTGTGCTTCCCAAATCCTGCTCAGTTAC...GGACAGACCTTCCTGCCCCTTCTTCCTAGTAATTCTATTGTCAGTGTGACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR TCA 72 bp | CCTCCAGCCCTCTGTCCTGACTTTGGAAATGAGAGTTaGGTAGGACCACACGGTTTAGAAATGAAAAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PPALCPDFGNES*VGPHGLEMKSN Trigger: ATTGCTTTTCATTTCTAAACCGTGTGGTCCTACTCAACTCTCATTTCCAAAGTCAGGACAGAGGGCTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| 3UTR CCA 72 bp | CAAATCACGGCGTTGACAATGTCTACTTCTAAACTATaGAATGTTGTCACACTGACAATAGAATTACTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QITALTMSTSKL*NVVTLTIELLG Trigger: TCCTAGTAATTCTATTGTCAGTGTGACAACATTCCATAGTTTAGAAGTAGACATTGTCAACGCCGTGATTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCTTCTTGCGGCAGGCGATCTGTCTCTGTCCTTCTGTCCTTCCTTGGCCGCCAATGGGCGGGGCTaGATGCCTCGGGCGCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QKLLAAGDLSLSFCPSLAANGRG*MPRARR Trigger: CCGACGCGCCCGAGGCATCCAGCCCCGCCCATTGGC...GGCCAAGGAAGGACAGAAGGACAGAGACAGATCGCCTGCCGCAAGAAGCTTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | AGAATGAGACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCATGGGCGGGGCTGGATaGCTCGGGCGCGTCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RMRPLLVFRDFPRGLWLSMGGAG*LGRVGG Trigger: ACCCCCGACGCGCCCGAGGCATCCAGCCCCGCCCAT...GGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTCTCATTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCGCCAATGGGCGGGGCTaGATGCCTCGGGCGCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AWLEPLLSQSMSRRRMRPANGRG*MPRARR Trigger: CCGACGCGCCCGAGGCATCCAGCCCCGCCCATTGGC...GGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | GACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCAGGCCCAACAGTCCCAGGAACTTaGGGCGGTGCAGGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPFWSSETFHGDSGSPGPTVPGT*GGAGWL Trigger: GAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGT...TGGGCCTGGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGATGGGCGGGGCTGGATaGCTCGGGCGCGTCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLMGGAG*LGRVGG Trigger: ACCCCCGACGCGCCCGAGGCATCCAGCCCCGCCCAT...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | GCACAGGAAAGTGAGACCCGGGGAGCAGTGTGGAGGAGAGACCCCACTGCATGCACCAGCCGCACCTTCTaGGAGCTGAAGGACTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQESETRGAVWRRDPTACTSRTF*ELKDWV Trigger: GACCCAGTCCTTCAGCTCGCAGAAGGTGCGGCTGGT...GCATGCAGTGGGGTCTCTCCTCCACACTGCTCCCCGGGTCTCACTTTCCTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | GACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCAGGCCCAAGGAACTTGAGGCGGTaGAGGGTGGCTCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPFWSSETFHGDSGSPGPRNLRR*RVAPRR Trigger: CCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCT...TGGGCCTGGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | GCACAGGAAAGTGAGACCCGGGGAGCAGTGTGGAGGAGAGACCCCACTGCATGCGCAGGTTGGGCCGGCTaGCGTCTTCCCAGTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQESETRGAVWRRDPTACAGWAG*RLPSIS Trigger: AGAAATACTGGGAAGACGGCAGCCGGCCCAACCTGC...GCATGCAGTGGGGTCTCTCCTCCACACTGCTCCCCGGGTCTCACTTTCCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGGGTGGAACATTCTGGGACTCACCTCAGATGCTAACCAGTCCCCACAGGAACCAGGCTCTCCTTaGGCCAATGGGCGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAGWNILGLTSDANQSPQEPGSP*ANGRGW Trigger: CCAGCCCCGCCCATTGGCCCAAGGAGAGCCTGGTTC...CTGTGGGGACTGGTTAGCATCTGAGGTGAGTCCCAGAATGTTCCACCCAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCTTCTTGCGGCAGGCGATCTGTCTCTGTCCTTCTGTCCTTCCTTGGCCGAACCAGGCTCTCCTTaGGCCAATGGGCGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKLLAAGDLSLSFCPSLAEPGSP*ANGRGW Trigger: CCAGCCCCGCCCATTGGCCCAAGGAGAGCCTGGTTC...GGCCAAGGAAGGACAGAAGGACAGAGACAGATCGCCTGCCGCAAGAAGCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GCACAGGAAAGTGAGACCCGGGGAGCAGTGTGGAGGAGAGACCCCACTGCATGCCAGCTGACAGCAGAGTaGTGTGGATGTCGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQESETRGAVWRRDPTACQLTAE*CGCRPG Trigger: TCCTGGGCGACATCCACACCACTCTGCTGTCAGCTG...GCATGCAGTGGGGTCTCTCCTCCACACTGCTCCCCGGGTCTCACTTTCCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | CCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCAGGCCCAGACAGCTCAGGGTGCAGGATaGAGCCGTGTGTGTAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSGLQRLSTGTLALQAQTAQGAG*SRVCRR Trigger: ACGCCTACACACACGGCTGCATCCTGCACCCTGAGC...TGTCTGGGCCTGGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | ACCTTCAGAGGTGGAGACCGTGAGGGACGCACCCCTGTTCTTGAGCTGAGAATGTGCATCGCTCTCCAGTaGCGAGATGGGCCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFRGGDREGRTPVLELRMCIALQ*RDGPPA Trigger: AGCTGGTGGCCCATCTCGGCACTGGAGAGCGATGCA...CATTCTCAGCTCAAGAACAGGGGTGCGTCCCTCACGGTCTCCACCTCTGAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | CAGAACCTGGGCCCTGCTGGGTGGAACATTCTGGGACTCACCTCAGATGCTAACAGCAGCTCCCGGTACTaGAGCACTCGGGCGTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNLGPAGWNILGLTSDANSSSRY*STRACC Trigger: ACAACACGCCCGAGTGCTGCAGTACCGGGAGCTGCT...GTTAGCATCTGAGGTGAGTCCCAGAATGTTCCACCCAGCAGGGCCCAGGTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR GCA 90 bp | CCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCAGGCCCAGACAGCAGGTTGGGCCGGCTaGCGTCTTCCCAGTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSGLQRLSTGTLALQAQTAGWAG*RLPSIS Trigger: AGAAATACTGGGAAGACGGCAGCCGGCCCAACCTGC...TGTCTGGGCCTGGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGGCCCAGACAGAGGTACTGGTTAGATGAGTTGGGTCTCCAGGTTGGCGCCACCAGCTGCAGTTaGTGGGGGTCAGGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSRPRQRYWLDELGLQVGATSCS*WGSGCW Trigger: CCAACAACCTGACCCCCACCAACTGCAGCTGGTGGC...GCCAACCTGGAGACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGGCCCAGACAGAGGTACTGGTTAGATGAGTTGGGTCTCCAGGTTGGCTCTCCAGTGCCGAGATaGGCCACCAGCTGCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSRPRQRYWLDELGLQVGSPVPR*ATSCSW Trigger: CCAACTGCAGCTGGTGGCCCATCTCGGCACTGGAGA...GCCAACCTGGAGACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GGTGGAACATTCTGGGACTCACCTCAGATGCTAACCAGTCCCCACAGTAACGTCCTCTCCTTGGGCCAATaGGCGGGGCTGGATGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GGTFWDSPQMLTSPHSNVLSLGQ*AGLDAS Trigger: CGAGGCATCCAGCCCCGCCCATTGGCCCAAGGAGAG...GACGTTACTGTGGGGACTGGTTAGCATCTGAGGTGAGTCCCAGAATGTTCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR CCA 90 bp | GCCACTGCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGAAGGACTGCAGGTTaGGCCGGCTGCCGTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ATAWLEPLLSQSMSRRRMRRTAG*AGCRLP Trigger: GGGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCT...CATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGCAGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | AGAATGAGACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCAGAAGGACTGCAGGTTaGGCCGGCTGCCGTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RMRPLLVFRDFPRGLWLSRRTAG*AGCRLP Trigger: GGGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCT...GGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTCTCATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | GCCACTGCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGATGGGCCACCAGCTaGAGTTGGTGGGGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATAWLEPLLSQSMSRRRMRWATS*SWWGSG Trigger: ACCTGACCCCCACCAACTGCAGCTGGTGGCCCATCT...CATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGCAGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTGCCAAGAGGGAACGGGAGTGGTGAGCTCAGGGTaGAGGATGCAGCCGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSRLALSYRRGPCQEGTGVVSSG*RMQPCV Trigger: CACACACGGCTGCATCCTGCACCCTGAGCTCACCAC...TCCCGTTCCCTCTTGGCAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR CCA 90 bp | TTGGGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTTCTCAACATGCAGGGTCTCCACCGGCTTaGCTGCATCGCTCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSMSGSDTQTLSQHAGSPPA*LHRSPV Trigger: CACTGGAGAGCGATGCAGCCAAGCCGGTGGAGACCC...TGCATGTTGAGAAAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCAGGCCCAGACATGCGGATCTCAGCCGTaGCATACTTGGGGATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGLQRLSTGTLALQAQTCGSQP*HTWGSW Trigger: CCATGATCCCCAAGTATGCCACGGCTGAGATCCGCA...TGTCTGGGCCTGGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GCCACTGCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGGGGCTCAGAGAGCTGTaGTTCCTCCTCGTGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATAWLEPLLSQSMSRRRMGLREL*FLLVVQ Trigger: CTGGACCACGAGGAGGAACCACAGCTCTCTGAGCCC...CATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGCAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | ACCTTCAGAGGTGGAGACCGTGAGGGACGCACCCCTGTTCTTGAGCTGAGAATGAGCTCCGCCTCAATCTaGTCCAGCACCATAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFRGGDREGRTPVLELRMSSASI*SSTIAS Trigger: GCTGGCTATGGTGCTGGACCAGATTGAGGCGGAGCT...CATTCTCAGCTCAAGAACAGGGGTGCGTCCCTCACGGTCTCCACCTCTGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | AGAATGAGACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCCACCCAAGGAGCCCATaGGGAAGGATGCCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RMRPLLVFRDFPRGLWLSHPRSP*GRMPQR Trigger: TCTTTGGGGCATCCTTCCTCATGGGCTCCTTGGGTG...GGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTCTCATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | GCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGTCTTAGATGGGCCACCAGCTaGAGTTGGTGGGGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATAVSVHVQEKNETPSGLRWATS*SWWGSG Trigger: ACCTGACCCCCACCAACTGCAGCTGGTGGCCCATCT...AAGACCAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | CTGGATGCTTTATTGGGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTAGCAGCTCCCGGTACTaGAGCACTCGGGCGTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LDALLGTLSMSGSDTQTLSSSRY*STRACC Trigger: ACAACACGCCCGAGTGCTGCAGTACCGGGAGCTGCT...AAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAATAAAGCATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGCTCAGGGTGCAGGATaGAGCCGTGTGTGTAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLAQGAG*SRVCRR Trigger: ACGCCTACACACACGGCTGCATCCTGCACCCTGAGC...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGTGGTGAGCTCAGGGTaGAGGATGCAGCCGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLVVSSG*RMQPCV Trigger: CACACACGGCTGCATCCTGCACCCTGAGCTCACCAC...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTTCTCAACATGCAGAAACCAGCTGCAGTTGGTaGGGGTCAGGTTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLSMSGSDTQTLSQHAETSCSW*GSGCWG Trigger: CCCCCAACAACCTGACCCCCACCAACTGCAGCTGGT...TTCTGCATGTTGAGAAAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGGCCCAGACAGAGGTACTGGTTAGATGAGTTGGGTCTCCAGGTTGGCAAGGACTGGGTCCAGTaGTACAGAACCAGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRPRQRYWLDELGLQVGKDWVQ*YRTRLS Trigger: GGAGAGCCTGGTTCTGTACCACTGGACCCAGTCCTT...GCCAACCTGGAGACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGTCTTGGGCTCAGAGAGCTGTaGTTCCTCCTCGTGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATAVSVHVQEKNETPSGLGLREL*FLLVVQ Trigger: CTGGACCACGAGGAGGAACCACAGCTCTCTGAGCCC...AAGACCAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGGGTGGAACATTCTGGGACTCACCTCAGATGCTAACCAGTCCCCACAGGACAGCAGAGTGGTGTaGATGTCGCCCAGGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAGWNILGLTSDANQSPQDSRVV*MSPRTF Trigger: GAAAGTCCTGGGCGACATCCACACCACTCTGCTGTC...CTGTGGGGACTGGTTAGCATCTGAGGTGAGTCCCAGAATGTTCCACCCAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR TCA 90 bp | GCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCTCCTTATGCTCGCTCTaGGGCAGGCTCACATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWLEPLLSQSMSRRRMRPSLCSL*GRLTSL Trigger: GAGAGATGTGAGCCTGCCTCAGAGCGAGCATAAGGA...GGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | GTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTGCCAAGAGGGAACGGGATCATGGAATCTGTGGTaGGCTCAGGGTGCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VSRLALSYRRGPCQEGTGSWNLW*AQGAGC Trigger: GCATCCTGCACCCTGAGCTCACCACAGATTCCATGA...TCCCGTTCCCTCTTGGCAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAGGCCCAGACAGAGGTACTGGTTAGATGAGTTGGGTCTCCAGGTTGGCGTTGGGGATAACAGCTaGCAGCAGAGTGGTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRPRQRYWLDELGLQVGVGDNS*QQSGVD Trigger: ATCCACACCACTCTGCTGTCAGCTGTTATCCCCAAC...GCCAACCTGGAGACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | GGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTTCTCAACATGCAGAACACCCAAGGAGCCCATaGGGAAGGATGCCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTLSMSGSDTQTLSQHAEHPRSP*GRMPQR Trigger: TCTTTGGGGCATCCTTCCTCATGGGCTCCTTGGGTG...TTCTGCATGTTGAGAAAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTGGGTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTGCCAAGAGCTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MSWVSRLALSYRRGPCQELSKKD*RLGRLP Trigger: CGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAG...CTCTTGGCAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGACCCAACTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR CCA 90 bp | ATGAGTTGGGTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTGCCAAGAGTCTCCAGTGCCGAGATaGGCCACCAGCTGCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSWVSRLALSYRRGPCQESPVPR*ATSCSW Trigger: CCAACTGCAGCTGGTGGCCCATCTCGGCACTGGAGA...CTCTTGGCAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGACCCAACTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCTTGAGCTGAGAATGACCTTGGGAGGGAAGGTCAACATGGCTTTTGCTGGGTCTCCACCGGCTTaGCTGCATCGCTCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVLELRMTLGGKVNMAFAGSPPA*LHRSPV Trigger: CACTGGAGAGCGATGCAGCCAAGCCGGTGGAGACCC...AGCAAAAGCCATGTTGACCTTCCCTCCCAAGGTCATTCTCAGCTCAAGAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGCAGCTGACAGCAGAGTaGTGTGGATGTCGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLQLTAE*CGCRPG Trigger: TCCTGGGCGACATCCACACCACTCTGCTGTCAGCTG...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | CCTGTTCTTGAGCTGAGAATGACCTTGGGAGGGAAGGTCAACATGGCTTTTGCTGCACCTTCTGCGAGCTaGAGGACTGGGTCCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVLELRMTLGGKVNMAFAAPSAS*RTGSSG Trigger: ACCACTGGACCCAGTCCTTCAGCTCGCAGAAGGTGC...AGCAAAAGCCATGTTGACCTTCCCTCCCAAGGTCATTCTCAGCTCAAGAACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGTCCTTATGCTCGCTCTaGGGCAGGCTCACATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLSLCSL*GRLTSL Trigger: GAGAGATGTGAGCCTGCCTCAGAGCGAGCATAAGGA...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | AGAATGAGACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCCGTTGGCTAAATGTCTaGGGATCTCAGCCGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RMRPLLVFRDFPRGLWLSRWLNV*GSQPWH Trigger: ATGCCACGGCTGAGATCCGCAGACATTTAGCCAACG...GGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTCTCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTCAGATGCTAACCTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SWVSRLALSYRRGPSDANLSKKD*RLGRLP Trigger: CGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAG...GTTAGCATCTGAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGACCCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | TGGTCAACCCCGAAGAGCAGAGGTAAGCAAATGGATGTAAACACACTCTGTAAGCTCTCCTTGGGCCAATaGGCGGGGCTGGATGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: WSTPKSRGKQMDVNTLCKLSLGQ*AGLDAS Trigger: CGAGGCATCCAGCCCCGCCCATTGGCCCAAGGAGAG...CTTACAGAGTGTGTTTACATCCATTTGCTTACCTCTGCTCTTCGGGGTTGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGTCTTAAGGACTGGGTCCAGTaGTACAGAACCAGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATAVSVHVQEKNETPSGLKDWVQ*YRTRLS Trigger: GGAGAGCCTGGTTCTGTACCACTGGACCCAGTCCTT...AAGACCAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GCCACTGCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGCAGCCGTGGCATACTTaGGGATCATGGAATCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATAWLEPLLSQSMSRRRMQPWHT*GSWNLW Trigger: CCACAGATTCCATGATCCCCAAGTATGCCACGGCTG...CATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGCAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GGTGGAACATTCTGGGACTCACCTCAGATGCTAACCAGTCCCCACAGTAACGTCTGCGGATCTCAGCCGTaGCATACTTGGGGATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GGTFWDSPQMLTSPHSNVCGSQP*HTWGSW Trigger: CCATGATCCCCAAGTATGCCACGGCTGAGATCCGCA...GACGTTACTGTGGGGACTGGTTAGCATCTGAGGTGAGTCCCAGAATGTTCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR CCA 90 bp | ACCTTCAGAGGTGGAGACCGTGAGGGACGCACCCCTGTTCTTGAGCTGAGAATGTGTGGTTCCTCCTCGTaGTCCAGTTTCATGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFRGGDREGRTPVLELRMCGSSS*SSFMRS Trigger: AGACCTCATGAAACTGGACCACGAGGAGGAACCACA...CATTCTCAGCTCAAGAACAGGGGTGCGTCCCTCACGGTCTCCACCTCTGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | GTCACACTGACAATAGAATTACTAGGAAGAAGGGGCAGGAAGGTCTGTCCAGTGGCACCTTCTGCGAGCTaGAGGACTGGGTCCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTLTIELLGRRGRKVCPVAPSAS*RTGSSG Trigger: ACCACTGGACCCAGTCCTTCAGCTCGCAGAAGGTGC...CACTGGACAGACCTTCCTGCCCCTTCTTCCTAGTAATTCTATTGTCAGTGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | AGTTGGGTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTCAGATGCTAACCGTGGTCCAGTTTCATaGGGTCTGTGGTGGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWVSRLALSYRRGPSDANRGPVS*GLWWRW Trigger: CCAACGCCACCACAGACCTCATGAAACTGGACCACG...GTTAGCATCTGAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGACCCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | TGGTCAACCCCGAAGAGCAGAGGTAAGCAAATGGATGTAAACACACTCTGTAAGACAGTCCCAGGAACTTaGGGCGGTGCAGGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSTPKSRGKQMDVNTLCKTVPGT*GGAGWL Trigger: GAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGT...CTTACAGAGTGTGTTTACATCCATTTGCTTACCTCTGCTCTTCGGGGTTGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTGCCAAGAGGGAACGGGATGTGGTTCCTCCTCGTaGTCCAGTTTCATGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSRLALSYRRGPCQEGTGCGSSS*SSFMRS Trigger: AGACCTCATGAAACTGGACCACGAGGAGGAACCACA...TCCCGTTCCCTCTTGGCAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCTTGAGCTGAGAATGACCTTGGGAGGGAAGGTCAACATGGCTTTTGCTAGCTCCGCCTCAATCTaGTCCAGCACCATAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLELRMTLGGKVNMAFASSASI*SSTIAS Trigger: GCTGGCTATGGTGCTGGACCAGATTGAGGCGGAGCT...AGCAAAAGCCATGTTGACCTTCCCTCCCAAGGTCATTCTCAGCTCAAGAACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | GTCACACTGACAATAGAATTACTAGGAAGAAGGGGCAGGAAGGTCTGTCCAGTGCGTGGTCCAGTTTCATaGGGTCTGTGGTGGCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTLTIELLGRRGRKVCPVRGPVS*GLWWRW Trigger: CCAACGCCACCACAGACCTCATGAAACTGGACCACG...CACTGGACAGACCTTCCTGCCCCTTCTTCCTAGTAATTCTATTGTCAGTGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | TGGTCAACCCCGAAGAGCAGAGGTAAGCAAATGGATGTAAACACACTCTGTAAGACCAGCCGCACCTTCTaGGAGCTGAAGGACTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WSTPKSRGKQMDVNTLCKTSRTF*ELKDWV Trigger: GACCCAGTCCTTCAGCTCGCAGAAGGTGCGGCTGGT...CTTACAGAGTGTGTTTACATCCATTTGCTTACCTCTGCTCTTCGGGGTTGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTGGGTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTGCCAAGAGCGTTGGCTAAATGTCTaGGGATCTCAGCCGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MSWVSRLALSYRRGPCQERWLNV*GSQPWH Trigger: ATGCCACGGCTGAGATCCGCAGACATTTAGCCAACG...CTCTTGGCAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGACCCAACTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCACACTGACAATAGAATTACTAGGAAGAAGGGGCAGGAAGGTCTGTCCACCAGCTGCAGTTGGTaGGGGTCAGGTTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CCHTDNRITRKKGQEGLSTSCSW*GSGCWG Trigger: CCCCCAACAACCTGACCCCCACCAACTGCAGCTGGT...GGACAGACCTTCCTGCCCCTTCTTCCTAGTAATTCTATTGTCAGTGTGACAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | TTGGGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTTCTCAACATGCAAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSMSGSDTQTLSQHAKAKRL*TLSKKD Trigger: GTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTT...TGCATGTTGAGAAAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | GGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTTCTCAACATGCAGAAAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTLSMSGSDTQTLSQHAEKAKRL*TLSKKD Trigger: GTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTT...TTCTGCATGTTGAGAAAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGGCCCAGACAGAGGTACTGGTTAGATGAGTTGGGTCTCCAGGTTGGCATAATGTTGTCTCTGTaGATAATGACTGGGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRPRQRYWLDELGLQVGIMLSL*IMTGTS Trigger: GGAGGTCCCAGTCATTATCCACAGAGACAACATTAT...GCCAACCTGGAGACCCAACTCATCTAACCAGTACCTCTGTCTGGGCCTGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCACACTGACAATAGAATTACTAGGAAGAAGGGGCAGGAAGGTCTGTCCGACAGCAGAGTGGTGTaGATGTCGCCCAGGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCHTDNRITRKKGQEGLSDSRVV*MSPRTF Trigger: GAAAGTCCTGGGCGACATCCACACCACTCTGCTGTC...GGACAGACCTTCCTGCCCCTTCTTCCTAGTAATTCTATTGTCAGTGTGACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR CAA 72 bp | AGAAATGAAAAGCAATCGCTCCTCCTGGATGCTTTATaGGGGACTCTAAGCATGAGCGGCAGTGACACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNEKQSLLLDAL*GTLSMSGSDTQ Trigger: CTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAATAAAGCATCCAGGAGGAGCGATTGCTTTTCATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR TCA 90 bp | TGTTGTCACACTGACAATAGAATTACTAGGAAGAAGGGGCAGGAAGGTCTGTCCGTTGGGGATAACAGCTaGCAGCAGAGTGGTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CCHTDNRITRKKGQEGLSVGDNS*QQSGVD Trigger: ATCCACACCACTCTGCTGTCAGCTGTTATCCCCAAC...GGACAGACCTTCCTGCCCCTTCTTCCTAGTAATTCTATTGTCAGTGTGACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CCA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGATAATGTTGTCTCTGTaGATAATGACTGGGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLIMLSL*IMTGTS Trigger: GGAGGTCCCAGTCATTATCCACAGAGACAACATTAT...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| 3UTR CAA 72 bp | ATGCATAAGTGGACTTATGACCATGTCAGAAGCTTCTaGCGGCAGGCGATCTGTCTCTGTCCTTCTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MHKWTYDHVRSF*RQAICLCPSVL Trigger: AAGGACAGAAGGACAGAGACAGATCGCCTGCCGCAAGAAGCTTCTGACATGGTCATAAGTCCACTTATGCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| CDS GCA 90 bp | GGGGCTGGATGCCTCGGGCGCGTCGGGGGTCTCCACCGGCTTGGCTaGATCGCTCTCCAGTGCCGAGATGGGCCACCAGCTGCAGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GAGCLGRVGGLHRLG*IALQCRDGPPAAVG Trigger: ACCAACTGCAGCTGGTGGCCCATCTCGGCACTGGAGAGCGATGCAGCCAAGCCGGTGGAGACCCCCGACGCGCCCGAGGCATCCAGCCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS GCA 90 bp | GTGGTACAGAACCAGGCTCTCCTTGGGCCAATGGGCGGGGCTGGATaGCTCGGGCGCGTCGGGGGTCTCCACCGGCTTGGCTGCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVQNQALLGPMGGAG*LGRVGGLHRLGCIA Trigger: AGCGATGCAGCCAAGCCGGTGGAGACCCCCGACGCGCCCGAGGCATCCAGCCCCGCCCATTGGCCCAAGGAGAGCCTGGTTCTGTACCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS GCA 90 bp | GGGCGCGTCGGGGGTCTCCACCGGCTTGGCTGCATCGCTCTCCAGTaGCGAGATGGGCCACCAGCTGCAGTTGGTGGGGGTCAGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRVGGLHRLGCIALQ*RDGPPAAVGGGQVV Trigger: AACAACCTGACCCCCACCAACTGCAGCTGGTGGCCCATCTCGGCACTGGAGAGCGATGCAGCCAAGCCGGTGGAGACCCCCGACGCGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 90 bp | TCCAGTGGTACAGAACCAGGCTCTCCTTGGGCCAATGGGCGGGGCTaGATGCCTCGGGCGCGTCGGGGGTCTCCACCGGCTTGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSGTEPGSPWANGRG*MPRARRGSPPAWLH Trigger: ATGCAGCCAAGCCGGTGGAGACCCCCGACGCGCCCGAGGCATCCAGCCCCGCCCATTGGCCCAAGGAGAGCCTGGTTCTGTACCACTGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 90 bp | CAGCGCATCCAGCAGCTCCCGGTACTGCAGCACTCGGGCGTGTTGTaGGCTGCCCGCCTCGGGCATCAAGGCCACCACATGCTCTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QRIQQLPVLQHSGVL*AARLGHQGHHMLSR Trigger: ACGGGAGAGCATGTGGTGGCCTTGATGCCCGAGGCGGGCAGCCCACAACACGCCCGAGTGCTGCAGTACCGGGAGCTGCTGGATGCGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS-3UTR CAA 90 bp | GCACAGGAAAGTGAGACCCGGGGAGCAGTGTGGAGGAGAGACCCCACTGCATGCACCTCCTCACCCAGGTaGAGCCGCATGAACCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: AQESETRGAVWRRDPTACTSSPR*SRMNHG Trigger: ACCGTGGTTCATGCGGCTCAACCTGGGTGAGGAGGT...GCATGCAGTGGGGTCTCTCCTCCACACTGCTCCCCGGGTCTCACTTTCCTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | GACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCAGGCCCAGACAGTCCCAGGAACTaGAGGCGGTGCAGGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DPFWSSETFHGDSGSPGPDSPRN*RRCRVA Trigger: AGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTC...TGGGCCTGGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS GCA 90 bp | CCGTCTTCCCAGTATTTCTTGGACAGTCCCAGGAACTTGAGGCGGTaGAGGGTGGCTCCCAGGAGGACATCCGCCAGGGTGAAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PSSQYFLDSPRNLRR*RVAPRRTSARVKAQ Trigger: CTGTGCCTTCACCCTGGCGGATGTCCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 90 bp | GTGGTGTGGATGTCGCCCAGGACTTTCCGGAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGACTGCAGGTTGGGCCGGCTGCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVWMSPRTFRKAKRL*TLSKKDCRLGRLPS Trigger: AGACGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCCGGAAAGTCCTGGGCGACATCCACACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTCAGAGGTGGAGACCGTGAGGGACGCACCCCTGTTCTTGAGCTGAGAATGGGGGTCTCCACCGGCTaGGCTGCATCGCTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TFRGGDREGRTPVLELRMGVSTG*AASLSS Trigger: ACTGGAGAGCGATGCAGCCAAGCCGGTGGAGACCCC...CATTCTCAGCTCAAGAACAGGGGTGCGTCCCTCACGGTCTCCACCTCTGAAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS TCA 90 bp | TGGCGGTTTCCGTTTGACCAGTCGGAACGCGTTGGGGATAACAGCTaGCAGCAGAGTGGTGTGGATGTCGCCCAGGACTTTCCGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WRFPFDQSERVGDNS*QQSGVDVAQDFPEG Trigger: GCCTTCCGGAAAGTCCTGGGCGACATCCACACCACTCTGCTGTCAGCTGTTATCCCCAACGCGTTCCGACTGGTCAAACGGAAACCGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CCA 90 bp | ACCAGTCGGAACGCGTTGGGGATAACAGCTGACAGCAGAGTGGTGTaGATGTCGCCCAGGACTTTCCGGAAGGCAAAGCGTCTCTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TSRNALGITADSRVV*MSPRTFRKAKRLWT Trigger: GGTCCAGAGACGCTTTGCCTTCCGGAAAGTCCTGGGCGACATCCACACCACTCTGCTGTCAGCTGTTATCCCCAACGCGTTCCGACTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS-3UTR CAA 90 bp | CTGGATGCTTTATTGGGGACTCTAAGCATGAGCGGCAGTGACACCCAGACCCTTAGAACCAGGCTCTCCTaGGGCCAATGGGCGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LDALLGTLSMSGSDTQTLRTRLS*GQWAGL Trigger: CAGCCCCGCCCATTGGCCCAAGGAGAGCCTGGTTCT...AAGGGTCTGGGTGTCACTGCCGCTCATGCTTAGAGTCCCCAATAAAGCATCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | GCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCAAGAAGGACTGCAGGTaGGGCCGGCTGCCGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWLEPLLSQSMSRRRMRPKKDCR*GRLPSS Trigger: GGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCTT...GGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS TCA 90 bp | TCACCCAGGTTGAGCCGCATGAACCACGGTTCCTTATGCTCGCTCTaGGGCAGGCTCACATCTCTCTCTTCACAGGCCAGGCCCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPRLSRMNHGSLCSL*GRLTSLSSQARPFS Trigger: TGAGAAGGGCCTGGCCTGTGAAGAGAGAGATGTGAGCCTGCCTCAGAGCGAGCATAAGGAACCGTGGTTCATGCGGCTCAACCTGGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS TCA 90 bp | GGTAGGGCTCAGAGAGCTGTGGTTCCTCCTCGTGGTCCAGTTTCATaGGGTCTGTGGTGGCGTTGGCTAAATGTCTGCGGATCTCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRAQRAVVPPRGPVS*GLWWRWLNVCGSQP Trigger: CGGCTGAGATCCGCAGACATTTAGCCAACGCCACCACAGACCTCATGAAACTGGACCACGAGGAGGAACCACAGCTCTCTGAGCCCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CCA 90 bp | GGAAGGCAAAGCGTCTCTGGACCCTCTCAAAGAAGGACTGCAGGTTaGGCCGGCTGCCGTCTTCCCAGTATTTCTTGGACAGTCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRQSVSGPSQRRTAG*AGCRLPSISWTVPG Trigger: TCCTGGGACTGTCCAAGAAATACTGGGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS-3UTR CAA 90 bp | GCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGTCTTGACAGTCCCAGGAACTaGAGGCGGTGCAGGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATAVSVHVQEKNETPSGLDSPRN*RRCRVA Trigger: AGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTC...AAGACCAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGAAGAAGGACTGCAGGTaGGGCCGGCTGCCGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLKKDCR*GRLPSS Trigger: GGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCTT...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | GCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGGTCTTACCTCCTCACCCAGGTaGAGCCGCATGAACCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: ATAVSVHVQEKNETPSGLTSSPR*SRMNHG Trigger: ACCGTGGTTCATGCGGCTCAACCTGGGTGAGGAGGT...AAGACCAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS GCA 90 bp | ACTTTCCGGAAGGCAAAGCGTCTCTGGACCCTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCGTCTTCCCAGTATTTCTTGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: TFRKAKRLWTLSKKD*RLGRLPSSQYFLDS Trigger: ACTGTCCAAGAAATACTGGGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCCGGAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTTCTTGAGCTGAGAATGACCTTGGGAGGGAAGGTCAACATGGCTTTTGCTGGCCACCAGCTGCAGTaGGTGGGGGTCAGGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVLELRMTLGGKVNMAFAGHQLQ*VGVRLL Trigger: CAACAACCTGACCCCCACCAACTGCAGCTGGTGGCC...AGCAAAAGCCATGTTGACCTTCCCTCCCAAGGTCATTCTCAGCTCAAGAACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTCAGATGCTAACGGCCACCAGCTGCAGTaGGTGGGGGTCAGGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SWVSRLALSYRRGPSDANGHQLQ*VGVRLL Trigger: CAACAACCTGACCCCCACCAACTGCAGCTGGTGGCC...GTTAGCATCTGAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGACCCAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | GTCACACTGACAATAGAATTACTAGGAAGAAGGGGCAGGAAGGTCTGTCCAGTGGGGGTCTCCACCGGCTaGGCTGCATCGCTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VTLTIELLGRRGRKVCPVGVSTG*AASLSS Trigger: ACTGGAGAGCGATGCAGCCAAGCCGGTGGAGACCCC...CACTGGACAGACCTTCCTGCCCCTTCTTCCTAGTAATTCTATTGTCAGTGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | GCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCAGGTCTGTGGTGGCGTaGGCTAAATGTCTGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: AWLEPLLSQSMSRRRMRPRSVVA*AKCLRI Trigger: GATCCGCAGACATTTAGCCAACGCCACCACAGACCT...GGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | GCCACTGCTTGGCTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGTCAGCCGTGGCATACTaGGGGATCATGGAATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ATAWLEPLLSQSMSRRRMSAVAY*GIMESV Trigger: CACAGATTCCATGATCCCCAAGTATGCCACGGCTGA...CATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAGCCAAGCAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | CTTGAGCCACTGCTGTCTCAGTCCATGTCCAGGAGAAGAATGAGACCCCTTCTGTCAGCCGTGGCATACTaGGGGATCATGGAATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LEPLLSQSMSRRRMRPLLSAVAY*GIMESV Trigger: CACAGATTCCATGATCCCCAAGTATGCCACGGCTGA...CAGAAGGGGTCTCATTCTTCTCCTGGACATGGACTGAGACAGCAGTGGCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | ACCTTCAGAGGTGGAGACCGTGAGGGACGCACCCCTGTTCTTGAGCTGAGAATGTCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TFRGGDREGRTPVLELRMSSQYF*DSPRNL Trigger: CAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGA...CATTCTCAGCTCAAGAACAGGGGTGCGTCCCTCACGGTCTCCACCTCTGAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS CCA 90 bp | GGCCATAAGCTTCTTTTGTTTAGAAAGGTAGGGCTCAGAGAGCTGTaGTTCCTCCTCGTGGTCCAGTTTCATGAGGTCTGTGGTGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GHKLLLFRKVGLREL*FLLVVQFHEVCGGV Trigger: AACGCCACCACAGACCTCATGAAACTGGACCACGAGGAGGAACCACAGCTCTCTGAGCCCTACCTTTCTAAACAAAAGAAGCTTATGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS-3UTR CAA 90 bp | AGAATGAGACCCCTTCTGGTCTTCAGAGACTTTCCACGGGGACTCTGGCTCTCCGGCCATAAGCTTCTTTaGTTTAGAAAGGTAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RMRPLLVFRDFPRGLWLSGHKLL*FRKVGL Trigger: GAGCCCTACCTTTCTAAACAAAAGAAGCTTATGGCC...GGAGAGCCAGAGTCCCCGTGGAAAGTCTCTGAAGACCAGAAGGGGTCTCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 |
||
| CDS-3UTR CAA 90 bp | ATGAGTTGGGTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTGCCAAGAGTCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: MSWVSRLALSYRRGPCQESSQYF*DSPRNL Trigger: CAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGA...CTCTTGGCAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGACCCAACTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018087.13 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGTCTCCAGGTTGGCTTTGTCCTATAGAAGAGGTCCCTCAGATGCTAACGGCCATAAGCTTCTTTaGTTTAGAAAGGTAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SWVSRLALSYRRGPSDANGHKLL*FRKVGL Trigger: GAGCCCTACCTTTCTAAACAAAAGAAGCTTATGGCC...GTTAGCATCTGAGGGACCTCTTCTATAGGACAAAGCCAACCTGGAGACCCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109420.10 |
||
| CDS GCA 72 bp | AACCAGGCTCTCCTTGGGCCAATGGGCGGGGCTGGATaGCTCGGGCGCGTCGGGGGTCTCCACCGGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: NQALLGPMGGAG*LGRVGGLHRLG Trigger: GCCAAGCCGGTGGAGACCCCCGACGCGCCCGAGGCATCCAGCCCCGCCCATTGGCCCAAGGAGAGCCTGGTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS GCA 72 bp | TGCCTCGGGCGCGTCGGGGGTCTCCACCGGCTTGGCTaGATCGCTCTCCAGTGCCGAGATGGGCCACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLGRVGGLHRLG*IALQCRDGPPA Trigger: AGCTGGTGGCCCATCTCGGCACTGGAGAGCGATGCAGCCAAGCCGGTGGAGACCCCCGACGCGCCCGAGGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS GCA 72 bp | GCGTCCATGGGCAGCGCATCCAGCAGCTCCCGGTACTaGAGCACTCGGGCGTGTTGTGGGCTGCCCGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ASMGSASSSSRY*STRACCGLPAS Trigger: CGAGGCGGGCAGCCCACAACACGCCCGAGTGCTGCAGTACCGGGAGCTGCTGGATGCGCTGCCCATGGACGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CCA 72 bp | TGGATGCCTCGGGCGCGTCGGGGGTCTCCACCGGCTTaGCTGCATCGCTCTCCAGTGCCGAGATGGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: WMPRARRGSPPA*LHRSPVPRWAT Trigger: GGTGGCCCATCTCGGCACTGGAGAGCGATGCAGCCAAGCCGGTGGAGACCCCCGACGCGCCCGAGGCATCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 72 bp | ACAGAACCAGGCTCTCCTTGGGCCAATGGGCGGGGCTaGATGCCTCGGGCGCGTCGGGGGTCTCCACCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TEPGSPWANGRG*MPRARRGSPPA Trigger: AGCCGGTGGAGACCCCCGACGCGCCCGAGGCATCCAGCCCCGCCCATTGGCCCAAGGAGAGCCTGGTTCTGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CAA 72 bp | CTGGATGCCTCGGGCGCGTCGGGGGTCTCCACCGGCTaGGCTGCATCGCTCTCCAGTGCCGAGATGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LDASGASGVSTG*AASLSSAEMGH Trigger: GTGGCCCATCTCGGCACTGGAGAGCGATGCAGCCAAGCCGGTGGAGACCCCCGACGCGCCCGAGGCATCCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CAA 90 bp | GGGCAGCGCATCCAGCAGCTCCCGGTACTGCAGCACTCGGGCGTGTaGTGGGCTGCCCGCCTCGGGCATCAAGGCCACCACATGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GQRIQQLPVLQHSGV*WAARLGHQGHHMLS Trigger: GGAGAGCATGTGGTGGCCTTGATGCCCGAGGCGGGCAGCCCACAACACGCCCGAGTGCTGCAGTACCGGGAGCTGCTGGATGCGCTGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS GCA 72 bp | GCTCCCGGTACTGCAGCACTCGGGCGTGTTGTGGGCTaGCCGCCTCGGGCATCAAGGCCACCACATGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: APGTAALGRVVG*PPRASRPPHAL Trigger: GAGAGCATGTGGTGGCCTTGATGCCCGAGGCGGGCAGCCCACAACACGCCCGAGTGCTGCAGTACCGGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CCA 72 bp | CAGCAGCTCCCGGTACTGCAGCACTCGGGCGTGTTGTaGGCTGCCCGCCTCGGGCATCAAGGCCACCACATG | + |
|
Preference number: 6 (lower is better) Translates to: QQLPVLQHSGVL*AARLGHQGHHM Trigger: CATGTGGTGGCCTTGATGCCCGAGGCGGGCAGCCCACAACACGCCCGAGTGCTGCAGTACCGGGAGCTGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CAA 72 bp | ATCCAGCAGCTCCCGGTACTGCAGCACTCGGGCGTGTaGTGGGCTGCCCGCCTCGGGCATCAAGGCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: IQQLPVLQHSGV*WAARLGHQGHH Trigger: GTGGTGGCCTTGATGCCCGAGGCGGGCAGCCCACAACACGCCCGAGTGCTGCAGTACCGGGAGCTGCTGGAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS TCA 72 bp | GGTGCAGGGTGGCTCCCAGGAGGACATCCGCCAGGGTaGAGGCACAGCCACAGAGCCACAGCTCGCACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GAGWLPGGHPPG*RHSHRATARTS Trigger: AGACGTGCGAGCTGTGGCTCTGTGGCTGTGCCTTCACCCTGGCGGATGTCCTCCTGGGAGCCACCCTGCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 72 bp | AGGACTGGGTCCAGTGGTACAGAACCAGGCTCTCCTTaGGCCAATGGGCGGGGCTGGATGCCTCGGGCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RTGSSGTEPGSP*ANGRGWMPRAR Trigger: ACGCGCCCGAGGCATCCAGCCCCGCCCATTGGCCCAAGGAGAGCCTGGTTCTGTACCACTGGACCCAGTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CAA 72 bp | AAGGACTGGGTCCAGTGGTACAGAACCAGGCTCTCCTaGGGCCAATGGGCGGGGCTGGATGCCTCGGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: KDWVQWYRTRLS*GQWAGLDASGA Trigger: CGCGCCCGAGGCATCCAGCCCCGCCCATTGGCCCAAGGAGAGCCTGGTTCTGTACCACTGGACCCAGTCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 72 bp | CCACCGGCTTGGCTGCATCGCTCTCCAGTGCCGAGATaGGCCACCAGCTGCAGTTGGTGGGGGTCAGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PPAWLHRSPVPR*ATSCSWWGSGC Trigger: ACAACCTGACCCCCACCAACTGCAGCTGGTGGCCCATCTCGGCACTGGAGAGCGATGCAGCCAAGCCGGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 72 bp | CAGGGTGCAGGATGCAGCCGTGTGTGTAGGCGTCCATaGGCAGCGCATCCAGCAGCTCCCGGTACTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QGAGCSRVCRRP*AAHPAAPGTAA Trigger: TGCTGCAGTACCGGGAGCTGCTGGATGCGCTGCCCATGGACGCCTACACACACGGCTGCATCCTGCACCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CAA 90 bp | AAGAAGGACTGCAGGTTGGGCCGGCTGCCGTCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTGAGGCGGTGCAGGGTGGCTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KKDCRLGRLPSSQYF*DSPRNLRRCRVAPR Trigger: CCTGGGAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS GCA 72 bp | CAGTATTTCTTGGACAGTCCCAGGAACTTGAGGCGGTaGAGGGTGGCTCCCAGGAGGACATCCGCCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QYFLDSPRNLRR*RVAPRRTSARV Trigger: CACCCTGGCGGATGTCCTCCTGGGAGCCACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CAA 72 bp | TGCAGGTTGGGCCGGCTGCCGTCTTCCCAGTATTTCTaGGACAGTCCCAGGAACTTGAGGCGGTGCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRLGRLPSSQYF*DSPRNLRRCRV Trigger: CACCCTGCACCGCCTCAAGTTCCTGGGACTGTCCAAGAAATACTGGGAAGACGGCAGCCGGCCCAACCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 72 bp | ATGTCGCCCAGGACTTTCCGGAAGGCAAAGCGTCTCTaGACCCTCTCAAAGAAGGACTGCAGGTTGGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: MSPRTFRKAKRL*TLSKKDCRLGR Trigger: CCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCCGGAAAGTCCTGGGCGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CAA 90 bp | CGGAAGGCAAAGCGTCTCTGGACCCTCTCAAAGAAGGACTGCAGGTaGGGCCGGCTGCCGTCTTCCCAGTATTTCTTGGACAGTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RKAKRLWTLSKKDCR*GRLPSSQYFLDSPR Trigger: CCTGGGACTGTCCAAGAAATACTGGGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CAA 90 bp | GCCCCAAAGAAGGATGGCGGTTTCCGTTTGACCAGTCGGAACGCGTaGGGGATAACAGCTGACAGCAGAGTGGTGTGGATGTCGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: APKKDGGFRLTSRNA*GITADSRVVWMSPR Trigger: CCTGGGCGACATCCACACCACTCTGCTGTCAGCTGTTATCCCCAACGCGTTCCGACTGGTCAAACGGAAACCGCCATCCTTCTTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS GCA 72 bp | GGACCCTCTCAAAGAAGGACTGCAGGTTGGGCCGGCTaGCGTCTTCCCAGTATTTCTTGGACAGTCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPSQRRTAGWAG*RLPSISWTVPG Trigger: TCCTGGGACTGTCCAAGAAATACTGGGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CAA 90 bp | GAGCCCATGAGGAAGGATGCCCCAAAGAAGGATGGCGGTTTCCGTTaGACCAGTCGGAACGCGTTGGGGATAACAGCTGACAGCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: EPMRKDAPKKDGGFR*TSRNALGITADSRV Trigger: CACTCTGCTGTCAGCTGTTATCCCCAACGCGTTCCGACTGGTCAAACGGAAACCGCCATCCTTCTTTGGGGCATCCTTCCTCATGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS TCA 72 bp | TTGAGCCGCATGAACCACGGTTCCTTATGCTCGCTCTaGGGCAGGCTCACATCTCTCTCTTCACAGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRMNHGSLCSL*GRLTSLSSQAR Trigger: CCTGGCCTGTGAAGAGAGAGATGTGAGCCTGCCTCAGAGCGAGCATAAGGAACCGTGGTTCATGCGGCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS TCA 72 bp | CCGTTTGACCAGTCGGAACGCGTTGGGGATAACAGCTaGCAGCAGAGTGGTGTGGATGTCGCCCAGGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: PFDQSERVGDNS*QQSGVDVAQDF Trigger: AAAGTCCTGGGCGACATCCACACCACTCTGCTGTCAGCTGTTATCCCCAACGCGTTCCGACTGGTCAAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS TCA 72 bp | CAGAGAGCTGTGGTTCCTCCTCGTGGTCCAGTTTCATaGGGTCTGTGGTGGCGTTGGCTAAATGTCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QRAVVPPRGPVS*GLWWRWLNVLP Trigger: CGGGAGGACATTTAGCCAACGCCACCACAGACCTCATGAAACTGGACCACGAGGAGGAACCACAGCTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137070.2 |
||
| CDS GCA 72 bp | AAGGCAAAGCGTCTCTGGACCCTCTCAAAGAAGGACTaGAGGTTGGGCCGGCTGCCGTCTTCCCAGTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: KAKRLWTLSKKD*RLGRLPSSQYF Trigger: GAAATACTGGGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTTTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 72 bp | AGCGTCTCTGGACCCTCTCAAAGAAGGACTGCAGGTTaGGCCGGCTGCCGTCTTCCCAGTATTTCTTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SVSGPSQRRTAG*AGCRLPSISWT Trigger: TGTCCAAGAAATACTGGGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 72 bp | AACGCGTTGGGGATAACAGCTGACAGCAGAGTGGTGTaGATGTCGCCCAGGACTTTCCGGAAGGCAAAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: NALGITADSRVV*MSPRTFRKAKR Trigger: ACGCTTTGCCTTCCGGAAAGTCCTGGGCGACATCCACACCACTCTGCTGTCAGCTGTTATCCCCAACGCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CAA 72 bp | AAGCGTCTCTGGACCCTCTCAAAGAAGGACTGCAGGTaGGGCCGGCTGCCGTCTTCCCAGTATTTCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KRLWTLSKKDCR*GRLPSSQYFLD Trigger: GTCCAAGAAATACTGGGAAGACGGCAGCCGGCCCAACCTGCAGTCCTTCTTTGAGAGGGTCCAGAGACGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CAA 72 bp | TCCTCGTGGTCCAGTTTCATGAGGTCTGTGGTGGCGTaGGCTAAATGTCCTCCCGTGAAGGTGCGTTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SSWSSFMRSVVA*AKCPPVKVRST Trigger: CGTGGAACGCACCTTCACGGGAGGACATTTAGCCAACGCCACCACAGACCTCATGAAACTGGACCACGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137070.2 |
||
| CDS TCA 72 bp | CAGAGAGCTGTGGTTCCTCCTCGTGGTCCAGTTTCATaGGGTCTGTGGTGGCGTTGGCTAAATGTCTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: QRAVVPPRGPVS*GLWWRWLNVCG Trigger: TCCGCAGACATTTAGCCAACGCCACCACAGACCTCATGAAACTGGACCACGAGGAGGAACCACAGCTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CAA 72 bp | TCTCTGTGGATAATGACTGGGACCTCCTCACCCAGGTaGAGCCGCATGAACCACGGTTCCTTATGCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLWIMTGTSSPR*SRMNHGSLCSL Trigger: GAGCGAGCATAAGGAACCGTGGTTCATGCGGCTCAACCTGGGTGAGGAGGTCCCAGTCATTATCCACAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CAA 72 bp | TCCTCGTGGTCCAGTTTCATGAGGTCTGTGGTGGCGTaGGCTAAATGTCTGCGGATCTCAGCCGTGGCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SSWSSFMRSVVA*AKCLRISAVAY Trigger: GTATGCCACGGCTGAGATCCGCAGACATTTAGCCAACGCCACCACAGACCTCATGAAACTGGACCACGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CAA 72 bp | AAGGATGGCGGTTTCCGTTTGACCAGTCGGAACGCGTaGGGGATAACAGCTGACAGCAGAGTGGTGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: KDGGFRLTSRNA*GITADSRVVWM Trigger: CATCCACACCACTCTGCTGTCAGCTGTTATCCCCAACGCGTTCCGACTGGTCAAACGGAAACCGCCATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CAA 72 bp | AGGAAGGATGCCCCAAAGAAGGATGGCGGTTTCCGTTaGACCAGTCGGAACGCGTTGGGGATAACAGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RKDAPKKDGGFR*TSRNALGITAD Trigger: GTCAGCTGTTATCCCCAACGCGTTCCGACTGGTCAAACGGAAACCGCCATCCTTCTTTGGGGCATCCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CAA 72 bp | TTGGCTAAATGTCTGCGGATCTCAGCCGTGGCATACTaGGGGATCATGGAATCTGTGGTGAGCTCAGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LAKCLRISAVAY*GIMESVVSSGC Trigger: GCACCCTGAGCTCACCACAGATTCCATGATCCCCAAGTATGCCACGGCTGAGATCCGCAGACATTTAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 |
||
| CDS CAA 90 bp | GTAGCTCACGTCATCGTGCTCCAGGATCTTGGCCATAAGCTTCTTTaGTTTAGAAAGGTAGGGCTCAGAGAGCTGTGGTTCCTCCTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VAHVIVLQDLGHKLL*FRKVGLRELWFLLV Trigger: CACGAGGAGGAACCACAGCTCTCTGAGCCCTACCTTTCTAAACAAAAGAAGCTTATGGCCAAGATCCTGGAGCACGATGACGTGAGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CCA 72 bp | CTTCTTTTGTTTAGAAAGGTAGGGCTCAGAGAGCTGTaGTTCCTCCTCGTGGTCCAGTTTCATGAGGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLLFRKVGLREL*FLLVVQFHEVC Trigger: ACAGACCTCATGAAACTGGACCACGAGGAGGAACCACAGCTCTCTGAGCCCTACCTTTCTAAACAAAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||
| CDS CAA 72 bp | GTCATCGTGCTCCAGGATCTTGGCCATAAGCTTCTTTaGTTTAGAAAGGTAGGGCTCAGAGAGCTGTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VIVLQDLGHKLL*FRKVGLRELWF Trigger: GAACCACAGCTCTCTGAGCCCTACCTTTCTAAACAAAAGAAGCTTATGGCCAAGATCCTGGAGCACGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018087.13 ENSMUST00000109420.10 ENSMUST00000109421.10 ENSMUST00000137070.2 |
||