Pregenerated sensors for GDAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025777Ensembl transcript IDs: ENSMUST00000026879.8, ENSMUST00000189736.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATGTCCCCAGTTTCGTCTTGCAAACCCCAGGAACTTCAGCCGATaGAATGTGACAGCCAGTGAGACATCTGCCAGTGTAAAGGATTCT | + |
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Preference number: 1 (lower is better) Translates to: PCPQFRLANPRNFSR*NVTASETSASVKDS Trigger: AGAATCCTTTACACTGGCAGATGTCTCACTGGCTGTCACATTGCATCGGCTGAAGTTCCTGGGGTTTGCAAGACGAAACTGGGGACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR TCA 90 bp | GTGGACAAGCTTCCCATCAGATTCTTGAAGCTTCTCCTAAGGCTTTaGCAGCCAGCTCCAGGAAAACTGCCTCCCTGCTTTAATAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: VDKLPIRFLKLLLRL*QPAPGKLPPCFNRR Trigger: CCTCCTATTAAAGCAGGGAGGCAGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATGGGAAGCTTGTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR GCA 90 bp | ACTCTGCATGACACATTGATGGGCAGAGGAAGATGGCACAAAAGCTaGGTGCATTTCCTCATCATAGATCTGAGTTCACATGGGGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: TLHDTLMGRGRWHKS*VHFLIIDLSSHGGV Trigger: AACACCCCCATGTGAACTCAGATCTATGATGAGGAAATGCACGCAGCTTTTGTGCCATCTTCCTCTGCCCATCAATGTGTCATGCAGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR TCA 90 bp | CAATGTCCTAGCAATAAGCAGATTCAGACACTCTGCATGACACATTaGTGGGCAGAGGAAGATGGCACAAAAGCTGCGTGCATTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: QCPSNKQIQTLCMTH*WAEEDGTKAACISS Trigger: TGAGGAAATGCACGCAGCTTTTGTGCCATCTTCCTCTGCCCATCAATGTGTCATGCAGAGTGTCTGAATCTGCTTATTGCTAGGACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR TCA 90 bp | AATGACAGCAATGTCCTAGCAATAAGCAGATTCAGACACTCTGCATaGCACATTGATGGGCAGAGGAAGATGGCACAAAAGCTGCGTGCA | + |
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Preference number: 1 (lower is better) Translates to: NDSNVLAISRFRHSA*HIDGQRKMAQKLRA Trigger: TGCACGCAGCTTTTGTGCCATCTTCCTCTGCCCATCAATGTGTCATGCAGAGTGTCTGAATCTGCTTATTGCTAGGACATTGCTGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR CCA 90 bp | GCAGATTCAGACACTCTGCATGACACATTGATGGGCAGAGGAAGATaGCACAAAAGCTGCGTGCATTTCCTCATCATAGATCTGAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: ADSDTLHDTLMGRGR*HKSCVHFLIIDLSS Trigger: TGAACTCAGATCTATGATGAGGAAATGCACGCAGCTTTTGTGCCATCTTCCTCTGCCCATCAATGTGTCATGCAGAGTGTCTGAATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR GCA 90 bp | ACTAAGGTCATTAATGTTTTATCGTCACTTGAAACCTCTCACACATaGCAAACCAAATGGAACAGTCTTAGACTACTGGGTGAACAGCGA | + |
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Preference number: 1 (lower is better) Translates to: TKVINVLSSLETSHT*QTKWNSLRLLGEQR Trigger: TCGCTGTTCACCCAGTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACGATAAAACATTAATGACCTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR GCA 90 bp | CATAAGCCATATTTACTTGAGACATTCATCTATATATTACTTGTATaGATAAATAGGGCTGTCGAGGCCAAGGTTCCCAGGACTGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: HKPYLLETFIYILLV*INRAVEAKVPRTED Trigger: GTCTTCAGTCCTGGGAACCTTGGCCTCGACAGCCCTATTTATGCATACAAGTAATATATAGATGAATGTCTCAAGTAAATATGGCTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR GCA 90 bp | CTAATGTCAAGAATACCTACCTATAAAACATTGAAGAGGCTTGGATaGCTCGCCTTGAACACTGGCACACATCTACCTCCAAATAAATTA | + |
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Preference number: 1 (lower is better) Translates to: LMSRIPTYKTLKRLG*LALNTGTHLPPNKL Trigger: TAATTTATTTGGAGGTAGATGTGTGCCAGTGTTCAAGGCGAGGCATCCAAGCCTCTTCAATGTTTTATAGGTAGGTATTCTTGACATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR TCA 90 bp | TCCTCTGGAGTTTCCTCATTTCTTCTTTGTAATTCAGTTTCCACCTaGTCCAAGACCTTCTCCAACTCATCAAGAATTTTCTTCAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: SSGVSSFLLCNSVST*SKTFSNSSRIFFKY Trigger: ATACTTGAAGAAAATTCTTGATGAGTTGGAGAAGGTCTTGGATCAGGTGGAAACTGAATTACAAAGAAGAAATGAGGAAACTCCAGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATTCCCCAAAGAGAGAGGCAACCATGGGCAGCAATGAAGGCCACTGGAGGTGAGGGTCTAGTGGAGTaGTTCCGTGTGCTGCTACCA | + |
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Preference number: 2 (lower is better) Translates to: EIPQRERQPWAAMKATGGEGLVE*FRVLLP Trigger: TGGTAGCAGCACACGGAATCACTCCACTAGACCCTC...ACCTCCAGTGGCCTTCATTGCTGCCCATGGTTGCCTCTCTCTTTGGGGAATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR TCA 90 bp | CATTCCTACAAGCAAACCAACCACAAGGGTGCTGCCAAGAACTTTTGGGGCCCTTCATGGAATCCACAGTaGGCTCAGGATGCAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: HSYKQTNHKGAAKNFWGPSWNPQ*AQDAKC Trigger: GCATTTTGCATCCTGAGCTCACTGTGGATTCCATGA...AGGGCCCCAAAAGTTCTTGGCAGCACCCTTGTGGTTGGTTTGCTTGTAGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCGTGTGCTGCTACCACAGATCCCAACAAACCTAGAAATAATTTGGTCTGGCCACAGAGCCAAGGCTaGTTGCCCTCCTCTGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: IPCAATTDPNKPRNNLVWPQSQG*LPSSGV Trigger: AACTCCAGAGGAGGGCAACCAGCCTTGGCTCTGTGG...CCAGACCAAATTATTTCTAGGTTTGTTGGGATCTGTGGTAGCAGCACACGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCCACTGGAGGTTAGCATCTACTGCTCTGTTCTGGATGTACTTCATTCTCGCAGTCACTCTCAGGTaGGGCACTATGAGCAATCAT | + |
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Preference number: 2 (lower is better) Translates to: EGHWRLASTALFWMYFILAVTLR*GTMSNH Trigger: ATGATTGCTCATAGTGCCTCACCTGAGAGTGACTGC...GAGAATGAAGTACATCCAGAACAGAGCAGTAGATGCTAACCTCCAGTGGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR TCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTTGGCCATGGGAGCCATaGAGACTACCCTACTATCCT | + |
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Preference number: 2 (lower is better) Translates to: HQILEASPKALTASSRKTWPWEP*RLPYYP Trigger: AGGATAGTAGGGTAGTCTTCATGGCTCCCATGGCCA...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAGACACGCTCATAATAGGTTTCCAAGTTCGGTCTCTTTCCATGTCCCCTCAGCCGATGCAATGTaGCAGCCAGTGAGACATCTG | + |
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Preference number: 2 (lower is better) Translates to: SSRHAHNRFPSSVSFHVPSADAM*QPVRHL Trigger: CAGATGTCTCACTGGCTGTCACATTGCATCGGCTGA...GGGGACATGGAAAGAGACCGAACTTGGAAACCTATTATGAGCGTGTCTTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR GCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTTTCAACACCCAGACCTaGAGTCACTCTCAGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: HQILEASPKALTASSRKTFNTQT*SHSQVR Trigger: CCTCACCTGAGAGTGACTGCAGGTCTGGGTGTTGAA...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTGTTTGGCAATGTATGCCTCTTGTAAGTCAGGGTTTTCTTCAGCAAGTTGAGGGTCTAGTGGAGTaGTTCCGTGTGCTGCTACCA | + |
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Preference number: 2 (lower is better) Translates to: ASVWQCMPLVSQGFLQQVEGLVE*FRVLLP Trigger: TGGTAGCAGCACACGGAATCACTCCACTAGACCCTC...AACTTGCTGAAGAAAACCCTGACTTACAAGAGGCATACATTGCCAAACAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR TCA 90 bp | CGTCACTTGAAACCTCTCACACATGCCAAACCAAATGGAACAGTCTTAGACTACCTCTGCATGACACATTaGTGGGCAGAGGAAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: RHLKPLTHAKPNGTVLDYLCMTH*WAEEDG Trigger: GCCATCTTCCTCTGCCCATCAATGTGTCATGCAGAG...GTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR GCA 90 bp | CCGTGTGCTGCTACCACAGATCCCAACAAACCTAGAAATAATTTGGTCTGGGTCACAGTGAGCTCAGGATaGAAAATGCAGCCATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PCAATTDPNKPRNNLVWVTVSSG*KMQPCV Trigger: CACACATGGCTGCATTTTGCATCCTGAGCTCACTGT...GACCCAGACCAAATTATTTCTAGGTTTGTTGGGATCTGTGGTAGCAGCACACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATTCCCCAAAGAGAGAGGCAACCATGGGCAGCAATGAAGGCCACTGGAGGTCACTATGAGCAATCATaGGTTGTTATTACTGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: EIPQRERQPWAAMKATGGHYEQS*VVITVC Trigger: GCAGACAGTAATAACAACCCATGATTGCTCATAGTG...ACCTCCAGTGGCCTTCATTGCTGCCCATGGTTGCCTCTCTCTTTGGGGAATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR TCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTCAAGGTTCCCAGGACTaGAGACAATCATATACAGGA | + |
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Preference number: 2 (lower is better) Translates to: HQILEASPKALTASSRKTQGSQD*RQSYTG Trigger: TCCTGTATATGATTGTCTTCAGTCCTGGGAACCTTG...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR GCA 90 bp | CGTCACTTGAAACCTCTCACACATGCCAAACCAAATGGAACAGTCTTAGACTACGGAAAACTGCCTCCCTaGTTTAATAGGAGGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: RHLKPLTHAKPNGTVLDYGKLPP*FNRRLV Trigger: GACAAGCCTCCTATTAAAGCAGGGAGGCAGTTTTCC...GTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTGTTTGGCAATGTATGCCTCTTGTAAGTCAGGGTTTTCTTCAGCAAGTTGCGAATCCTTGTGGTTaGATAAGCGGGGATCATGGA | + |
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Preference number: 2 (lower is better) Translates to: ASVWQCMPLVSQGFLQQVANPCG*ISGDHG Trigger: TCCATGATCCCCGCTTATGCAACCACAAGGATTCGC...AACTTGCTGAAGAAAACCCTGACTTACAAGAGGCATACATTGCCAAACAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCGTGTGCTGCTACCACAGATCCCAACAAACCTAGAAATAATTTGGTCTGGGTAATGCTGCACCCGTaGGTAATACATGCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: IPCAATTDPNKPRNNLVWVMLHP*VIHASF Trigger: GAAGGAAGCATGTATTACCCACGGGTGCAGCATTAC...CCAGACCAAATTATTTCTAGGTTTGTTGGGATCTGTGGTAGCAGCACACGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATAATAGGTTTCCAAGTTCGGTCTCTTTCCATGTCCCCAGTTTCGTCTTGCTGTGTAAGCATCCATTaGCAAGGAGTCAAGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LIIGFQVRSLSMSPVSSCCVSIH*QGVKKL Trigger: GAGCTTCTTGACTCCTTGCCAATGGATGCTTACACA...GCAAGACGAAACTGGGGACATGGAAAGAGACCGAACTTGGAAACCTATTATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR CCA 90 bp | CATAATAGGTTTCCAAGTTCGGTCTCTTTCCATGTCCCCAGTTTCGTCTTGCAACTGGTTGCCCTCCTCTaGAGTTTCCTCATTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: HNRFPSSVSFHVPSFVLQLVALL*SFLISS Trigger: AGAAGAAATGAGGAAACTCCAGAGGAGGGCAACCAG...TTGCAAGACGAAACTGGGGACATGGAAAGAGACCGAACTTGGAAACCTATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR TCA 90 bp | CGTCACTTGAAACCTCTCACACATGCCAAACCAAATGGAACAGTCTTAGACTACTCAGGTGAGGCACTATaGGCAATCATGGGTTGTTAT | + |
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Preference number: 2 (lower is better) Translates to: RHLKPLTHAKPNGTVLDYSGEAL*AIMGCY Trigger: ATAACAACCCATGATTGCTCATAGTGCCTCACCTGA...GTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR GCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTGTGTTTTCTATGCAGTaGATAGGTTTCTCCCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: HQILEASPKALTASSRKTVFSMQ*IGFSPV Trigger: TACTGGGGAGAAACCTATGCACTGCATAGAAAACAC...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCCGTGTGCTGCTACCACAGATCCCAACAAACCTAGAAATAATTTGGTCTGGTGTTACCAATCTGGCTaGGAATCCTTGTGGTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: IPCAATTDPNKPRNNLVWCYQSG*ESLWLH Trigger: ATGCAACCACAAGGATTCGCAGCCAGATTGGTAACA...CCAGACCAAATTATTTCTAGGTTTGTTGGGATCTGTGGTAGCAGCACACGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR TCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTGCTGCTAGTGAAAGATaGATCAGTACAATGTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: HQILEASPKALTASSRKTAASER*ISTMSC Trigger: ACAAGACATTGTACTGATTCATCTTTCACTAGCAGC...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTGTAAGTCAGGGTTTTCTTCAGCAAGTTTCTTTAGTTCAGACTCTGTGTTAGGCTGCGAATCCTTGTaGTTGCATAAGCGGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: SCKSGFSSASFFSSDSVLGCESL*LHKRGS Trigger: TGATCCCCGCTTATGCAACCACAAGGATTCGCAGCC...TAACACAGAGTCTGAACTAAAGAAACTTGCTGAAGAAAACCCTGACTTACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR-3UTR TCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTTGTCTTGTTTGTGTCTaGACTCTGTCTAGTATAACA | + |
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Preference number: 2 (lower is better) Translates to: HQILEASPKALTASSRKTCLVCV*TLSSIT Trigger: TGTTATACTAGACAGAGTTCAGACACAAACAAGACA...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCCACTGGAGGTTAGCATCTACTGCTCTGTTCTGGATGTACTTCATTCTCTTTCTCCTTTACTTATaGCTAAAGCTGCTAGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: EGHWRLASTALFWMYFILFLLYL*LKLLVK Trigger: TTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAA...GAGAATGAAGTACATCCAGAACAGAGCAGTAGATGCTAACCTCCAGTGGCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR CCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTATATTTAAACACACATaGATGAGTATGGGTGGACAT | + |
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Preference number: 2 (lower is better) Translates to: HQILEASPKALTASSRKTIFKHT*MSMGGH Trigger: ATGTCCACCCATACTCATCCATGTGTGTTTAAATAT...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR CAA 90 bp | AGAATACCTACCTATAAAACATTGAAGAGGCTTGGATGCCTCGCCTaGAACACTGGCACACATCTACCTCCAAATAAATTACAGATGAAA | + |
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Preference number: 2 (lower is better) Translates to: RIPTYKTLKRLGCLA*NTGTHLPPNKLQMK Trigger: TTTCATCTGTAATTTATTTGGAGGTAGATGTGTGCCAGTGTTCAAGGCGAGGCATCCAAGCCTCTTCAATGTTTTATAGGTAGGTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR TCA 90 bp | TACTACATTTGTCCCAAACTTTTTCACAGGTGGCTAATCTTAATGAAGATTCCCCTACCTATAAAACATTaGAGAGGCTTGGATGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: YYICPKLFHRWLILMKIPLPIKH*RGLDAS Trigger: CGAGGCATCCAAGCCTCTTCAATGTTTTATAGGTAG...GGGAATCTTCATTAAGATTAGCCACCTGTGAAAAAGTTTGGGACAAATGTAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR GCA 90 bp | TACTACATTTGTCCCAAACTTTTTCACAGGTGGCTAATCTTAATGAAGATTCCCGAGGTTAGCATCTACTaGTCTGTTCTGGATGTACTT | + |
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Preference number: 2 (lower is better) Translates to: YYICPKLFHRWLILMKIPEVSIY*SVLDVL Trigger: AAGTACATCCAGAACAGAGCAGTAGATGCTAACCTC...GGGAATCTTCATTAAGATTAGCCACCTGTGAAAAAGTTTGGGACAAATGTAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR TCA 90 bp | TACTACATTTGTCCCAAACTTTTTCACAGGTGGCTAATCTTAATGAAGATTCCCTTCCTGGTGATTTTCTaGCTCCATCATAACATATAC | + |
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Preference number: 2 (lower is better) Translates to: YYICPKLFHRWLILMKIPFLVIF*LHHNIY Trigger: GTATATGTTATGATGGAGTCAGAAAATCACCAGGAA...GGGAATCTTCATTAAGATTAGCCACCTGTGAAAAAGTTTGGGACAAATGTAGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR CCA 90 bp | TACTACATTTGTCCCAAACTTTTTCACAGGTGGCTAATCTTAATGAAGATTCCCAGACATATGTTTCAATaGGCATCTCATTCAAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: YYICPKLFHRWLILMKIPRHMFQ*ASHSSA Trigger: TGCACTTGAATGAGATGCCCATTGAAACATATGTCT...GGGAATCTTCATTAAGATTAGCCACCTGTGAAAAAGTTTGGGACAAATGTAGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR TCA 72 bp | ACTGGGTCTGGACAAGTGGATGAGGGTCTAGTGGAGTaGTTCCGTGTGCTGCTACCACAGATCCCAACAAAC | + |
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Preference number: 3 (lower is better) Translates to: TGSGQVDEGLVE*FRVLLPQIPTN Trigger: GTTTGTTGGGATCTGTGGTAGCAGCACACGGAATCACTCCACTAGACCCTCATCCACTTGTCCAGACCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026879.8 ENSMUST00000189736.2 |
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| 3UTR GCA 72 bp | CTCTGTGTTACCAATCTGGCTGCGAATCCTTGTGGTTaGATAAGCGGGGATCATGGAATCCACAGTGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: LCVTNLAANPCG*ISGDHGIHSEL Trigger: GAGCTCACTGTGGATTCCATGATCCCCGCTTATGCAACCACAAGGATTCGCAGCCAGATTGGTAACACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR GCA 72 bp | CAGTTTCGTCTTGCAAACCCCAGGAACTTCAGCCGATaGAATGTGACAGCCAGTGAGACATCTGCCAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: QFRLANPRNFSR*NVTASETSASV Trigger: TACACTGGCAGATGTCTCACTGGCTGTCACATTGCATCGGCTGAAGTTCCTGGGGTTTGCAAGACGAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR CCA 72 bp | AAGAGAGAGGCAACCATGGGCAGCAATGAAGGCCACTaGAGGTTAGCATCTACTGCTCTGTTCTGGATGTAC | + |
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Preference number: 3 (lower is better) Translates to: KREATMGSNEGH*RLASTALFWMY Trigger: GTACATCCAGAACAGAGCAGTAGATGCTAACCTCCAGTGGCCTTCATTGCTGCCCATGGTTGCCTCTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR-3UTR CAA 90 bp | CTCATAATAGGTTTCCAAGTTCGGTCTCTTTCCATGTCCCCAGTTTCGTCTTGCTCTGGCTGCGAATCCTaGTGGTTGCATAAGCGGGGA | + |
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Preference number: 3 (lower is better) Translates to: LIIGFQVRSLSMSPVSSCSGCES*WLHKRG Trigger: TCCCCGCTTATGCAACCACAAGGATTCGCAGCCAGA...GCAAGACGAAACTGGGGACATGGAAAGAGACCGAACTTGGAAACCTATTATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| 3UTR TCA 72 bp | CACCCAGACCTGCAGTCACTCTCAGGTGAGGCACTATaGGCAATCATGGGTTGTTATTACTGTCTGCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: HPDLQSLSGEAL*AIMGCYYCLLL Trigger: TAGGAGCAGACAGTAATAACAACCCATGATTGCTCATAGTGCCTCACCTGAGAGTGACTGCAGGTCTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR TCA 72 bp | AAATTCCCCAAAGAGAGAGGCAACCATGGGCAGCAATaGAGGCCACTGGAGGTTAGCATCTACTGCTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KFPKERGNHGQQ*RPLEVSIYCSV Trigger: AACAGAGCAGTAGATGCTAACCTCCAGTGGCCTTCATTGCTGCCCATGGTTGCCTCTCTCTTTGGGGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR TCA 72 bp | AGCAATAAGCAGATTCAGACACTCTGCATGACACATTaGTGGGCAGAGGAAGATGGCACAAAAGCTGCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SNKQIQTLCMTH*WAEEDGTKAAC Trigger: GCACGCAGCTTTTGTGCCATCTTCCTCTGCCCATCAATGTGTCATGCAGAGTGTCTGAATCTGCTTATTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGGTTTCCAAGTTCGGTCTCTTTCCATGTCCCCAGTTTCGTCTTGCAAACCCGTGTGTAAGCATCCATaGGCAAGGAGTCAAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IGFQVRSLSMSPVSSCKPVCKHP*ARSQEA Trigger: AGCTTCTTGACTCCTTGCCAATGGATGCTTACACAC...GGGTTTGCAAGACGAAACTGGGGACATGGAAAGAGACCGAACTTGGAAACCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCCCAGTTTCGTCTTGCAAACCCCAGGAACTTCAGCCGATGCAATGTGACATTAAGTCGCTTCTGTTaGGCAATGTATGCCTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: CPQFRLANPRNFSRCNVTLSRFC*AMYASC Trigger: ACAAGAGGCATACATTGCCAAACAGAAGCGACTTAA...TGTCACATTGCATCGGCTGAAGTTCCTGGGGTTTGCAAGACGAAACTGGGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTCACTTGAAACCTCTCACACATGCCAAACCAAATGGAACAGTCTTAGACTACACTCTGCATGACACATaGATGGGCAGAGGAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: RHLKPLTHAKPNGTVLDYTLHDT*MGRGRW Trigger: CCATCTTCCTCTGCCCATCAATGTGTCATGCAGAGT...GTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR TCA 72 bp | AACTGTTCAACACCCAGACCTGCAGTCACTCTCAGGTaGGGCACTATGAGCAATCATGGGTTGTTATTACTG | + |
|
Preference number: 3 (lower is better) Translates to: NCSTPRPAVTLR*GTMSNHGLLLL Trigger: CAGTAATAACAACCCATGATTGCTCATAGTGCCTCACCTGAGAGTGACTGCAGGTCTGGGTGTTGAACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR CCA 72 bp | GACACTCTGCATGACACATTGATGGGCAGAGGAAGATaGCACAAAAGCTGCGTGCATTTCCTCATCATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DTLHDTLMGRGR*HKSCVHFLIID Trigger: ATCTATGATGAGGAAATGCACGCAGCTTTTGTGCCATCTTCCTCTGCCCATCAATGTGTCATGCAGAGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR GCA 72 bp | GACACATTGATGGGCAGAGGAAGATGGCACAAAAGCTaGGTGCATTTCCTCATCATAGATCTGAGTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: DTLMGRGRWHKS*VHFLIIDLSSH Trigger: ATGTGAACTCAGATCTATGATGAGGAAATGCACGCAGCTTTTGTGCCATCTTCCTCTGCCCATCAATGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTATGAGCAATCATGGGTaGTTATTACTGTCTGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HQILEASPKALTASSRKTMSNHG*LLLSAP Trigger: AGGAGCAGACAGTAATAACAACCCATGATTGCTCAT...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR TCA 72 bp | AATGTCCTAGCAATAAGCAGATTCAGACACTCTGCATaGCACATTGATGGGCAGAGGAAGATGGCACAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NVLAISRFRHSA*HIDGQRKMAQK Trigger: CTTTTGTGCCATCTTCCTCTGCCCATCAATGTGTCATGCAGAGTGTCTGAATCTGCTTATTGCTAGGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR CCA 72 bp | ATGATCCTAAAAAGAAGATGCATTAAAGTGCCTCTCTaGCTAACAGTGGCTGTGCACCTCCTTATCATACGG | + |
|
Preference number: 3 (lower is better) Translates to: MILKRRCIKVPL*LTVAVHLLIIR Trigger: CCGTATGATAAGGAGGTGCACAGCCACTGTTAGCCAGAGAGGCACTTTAATGCATCTTCTTTTTAGGATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR-3UTR CAA 90 bp | TACTACATTTGTCCCAAACTTTTTCACAGGTGGCTAATCTTAATGAAGATTCCCTCAGAAAGCCATTGCTaGCTGGTTGTGACATTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: YYICPKLFHRWLILMKIPSESHC*LVVTFS Trigger: GGAAAATGTCACAACCAGCAAGCAATGGCTTTCTGA...GGGAATCTTCATTAAGATTAGCCACCTGTGAAAAAGTTTGGGACAAATGTAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR GCA 72 bp | TATCATGCTGCCAAGTCTCCTTCTGAAAAGCATAAATaGAAAATATCCCATTCCTACAAGCAAACCAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: YHAAKSPSEKHK*KISHSYKQTNH Trigger: GTGGTTGGTTTGCTTGTAGGAATGGGATATTTTGCATTTATGCTTTTCAGAAGGAGACTTGGCAGCATGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
||
| 3UTR GCA 72 bp | ATTAATGTTTTATCGTCACTTGAAACCTCTCACACATaGCAAACCAAATGGAACAGTCTTAGACTACTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: INVLSSLETSHT*QTKWNSLRLLG Trigger: ACCCAGTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACGATAAAACATTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR TCA 72 bp | TCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATaGATCAGTACAATGTCTTGTTTGTGTCTGAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SPLLMPKAASER*ISTMSCLCLNS Trigger: AGAGTTCAGACACAAACAAGACATTGTACTGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR CCA 72 bp | AATCAATACTACATTTGTCCCAAACTTTTTCACAGGTaGCTAATCTTAATGAAGATTCCCTCAGAAACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: NQYYICPKLFHR*LILMKIPSETK Trigger: CTTAGTTTCTGAGGGAATCTTCATTAAGATTAGCCACCTGTGAAAAAGTTTGGGACAAATGTAGTATTGATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR GCA 90 bp | GAAATTCCCCAAAGAGAGAGGCAACCATGGGCAGCAATGAAGGCCACTGGAGGTTTTGGCCACCCGGAATaGTGTTGGCAGCACCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EIPQRERQPWAAMKATGGFGHPE*CWQHRR Trigger: TCTGCGGTGCTGCCAACAGCATTCCGGGTGGCCAAA...ACCTCCAGTGGCCTTCATTGCTGCCCATGGTTGCCTCTCTCTTTGGGGAATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR GCA 90 bp | GAAATTCCCCAAAGAGAGAGGCAACCATGGGCAGCAATGAAGGCCACTGGAGGTAACCAAGGCTCATTGTaGTCACTCAGGGGCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: EIPQRERQPWAAMKATGGNQGSL*SLRGRL Trigger: AAGTCTGCCCCTGAGTGAGCACAATGAGCCTTGGTT...ACCTCCAGTGGCCTTCATTGCTGCCCATGGTTGCCTCTCTCTTTGGGGAATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGCCACTGGAGGTTAGCATCTACTGCTCTGTTCTGGATGTACTTCATTCTCCAACCACAAGGGTGCTaGCAAGAACTTTTGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EGHWRLASTALFWMYFILQPQGC*QELLGP Trigger: GGGCCCCAAAAGTTCTTGGCAGCACCCTTGTGGTTG...GAGAATGAAGTACATCCAGAACAGAGCAGTAGATGCTAACCTCCAGTGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR CCA 90 bp | GAAATTCCCCAAAGAGAGAGGCAACCATGGGCAGCAATGAAGGCCACTGGAGGTCATCGGGCATTAACCTaGGTGTTCTTTCATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EIPQRERQPWAAMKATGGHRALT*VFFHPG Trigger: TCCTGGATGAAAGAACACCCAGGTTAATGCCCGATG...ACCTCCAGTGGCCTTCATTGCTGCCCATGGTTGCCTCTCTCTTTGGGGAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR CAA 72 bp | GCTTCCCATCAGATTCTTGAAGCTTCTCCTAAGGCTTaGACAGCCAGCTCCAGGAAAACTGCCTCCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASHQILEASPKA*TASSRKTASLL Trigger: AAGCAGGGAGGCAGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATGGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR TCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTTCCAGTGGTACAGAATaGGGTGGACCTCCTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HQILEASPKALTASSRKTSSGTE*GGPPCP Trigger: CGGACAAGGAGGTCCACCTCATTCTGTACCACTGGA...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAGACACGCTCATAATAGGTTTCCAAGTTCGGTCTCTTTCCATGTCCCCTCCAGTGGTACAGAATaGGGTGGACCTCCTTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSRHAHNRFPSSVSFHVPSSGTE*GGPPCP Trigger: CGGACAAGGAGGTCCACCTCATTCTGTACCACTGGA...GGGGACATGGAAAGAGACCGAACTTGGAAACCTATTATGAGCGTGTCTTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
||
| CDS-3UTR GCA 90 bp | GAAATTCCCCAAAGAGAGAGGCAACCATGGGCAGCAATGAAGGCCACTGGAGGTTGTTACCAATCTGGCTaGGAATCCTTGTGGTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EIPQRERQPWAAMKATGGCYQSG*ESLWLH Trigger: ATGCAACCACAAGGATTCGCAGCCAGATTGGTAACA...ACCTCCAGTGGCCTTCATTGCTGCCCATGGTTGCCTCTCTCTTTGGGGAATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR GCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTAGAGCCAAGGCTGGTTaGCCTCCTCTGGAGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HQILEASPKALTASSRKTRAKAG*PPLEFP Trigger: AGGAAACTCCAGAGGAGGGCAACCAGCCTTGGCTCT...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR CCA 90 bp | CGTCACTTGAAACCTCTCACACATGCCAAACCAAATGGAACAGTCTTAGACTACCCACAGAGCCAAGGCTaGTTGCCCTCCTCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RHLKPLTHAKPNGTVLDYPQSQG*LPSSGV Trigger: AACTCCAGAGGAGGGCAACCAGCCTTGGCTCTGTGG...GTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR CAA 72 bp | GTTCAGACTCTGTGTTACCAATCTGGCTGCGAATCCTaGTGGTTGCATAAGCGGGGATCATGGAATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VQTLCYQSGCES*WLHKRGSWNPQ Trigger: CTGTGGATTCCATGATCCCCGCTTATGCAACCACAAGGATTCGCAGCCAGATTGGTAACACAGAGTCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
||
| CDS-3UTR TCA 90 bp | CGTCACTTGAAACCTCTCACACATGCCAAACCAAATGGAACAGTCTTAGACTACGCACCTTTTGAGAGCTaGAGGAGTGCGTCCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHLKPLTHAKPNGTVLDYAPFES*RSASSG Trigger: ACCACTGGACGCACTCCTTCAGCTCTCAAAAGGTGC...GTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTTGACTTAAGTCGCTTCTGTTTGGCAATGTATGCCTCTTGTAAGTCAGGGGCACCTTTTGAGAGCTaGAGGAGTGCGTCCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFDLSRFCLAMYASCKSGAPFES*RSASSG Trigger: ACCACTGGACGCACTCCTTCAGCTCTCAAAAGGTGC...CCCTGACTTACAAGAGGCATACATTGCCAAACAGAAGCGACTTAAGTCAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGCCACTGGAGGTTAGCATCTACTGCTCTGTTCTGGATGTACTTCATTCTCCCCGTGGGTAATACATaGTTCCTTCATCGGGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: EGHWRLASTALFWMYFILPVGNT*FLHRAL Trigger: TAATGCCCGATGAAGGAAGCATGTATTACCCACGGG...GAGAATGAAGTACATCCAGAACAGAGCAGTAGATGCTAACCTCCAGTGGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR TCA 90 bp | CGTCACTTGAAACCTCTCACACATGCCAAACCAAATGGAACAGTCTTAGACTACCGGTACTTCTCCAGCTaGGTTCAAGCGCATAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RHLKPLTHAKPNGTVLDYRYFSS*VQAHKP Trigger: TGGTTTATGCGCTTGAACTCAGCTGGAGAAGTACCG...GTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGTTTGGCAATGTATGCCTCTTGTAAGTCAGGGTTTTCTTCAGCAAGTTAAGGAGTGCGTCCAGTaGTACAGAATGAGGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ASVWQCMPLVSQGFLQQVKECVQ*YRMRWT Trigger: GGTCCACCTCATTCTGTACCACTGGACGCACTCCTT...AACTTGCTGAAGAAAACCCTGACTTACAAGAGGCATACATTGCCAAACAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
||
| CDS-3UTR CCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTGTAATGCTGCACCCGTaGGTAATACATGCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQILEASPKALTASSRKTVMLHP*VIHASF Trigger: GAAGGAAGCATGTATTACCCACGGGTGCAGCATTAC...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTCTGGTTGCCCTCCTCTaGAGTTTCCTCATTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQILEASPKALTASSRKTLVALL*SFLISS Trigger: AGAAGAAATGAGGAAACTCCAGAGGAGGGCAACCAG...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR TCA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTAATTCAGTTTCCACCTaGTCCAAGACCTTCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HQILEASPKALTASSRKTNSVST*SKTFSN Trigger: GTTGGAGAAGGTCTTGGATCAGGTGGAAACTGAATT...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR GCA 90 bp | CGTCACTTGAAACCTCTCACACATGCCAAACCAAATGGAACAGTCTTAGACTACACAGTGAGCTCAGGATaGAAAATGCAGCCATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RHLKPLTHAKPNGTVLDYTVSSG*KMQPCV Trigger: CACACATGGCTGCATTTTGCATCCTGAGCTCACTGT...GTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCATTTTCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATGAATCAACCAAGCGCACCTTTTaGGAGCTGAAGGAGTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHFLLYLCLKLLVKDESTKRTF*ELKECV Trigger: GACGCACTCCTTCAGCTCTCAAAAGGTGCGCTTGGT...TGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAAATGAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR CAA 72 bp | AAAGCACTAATGTCAAGAATACCTACCTATAAAACATaGAAGAGGCTTGGATGCCTCGCCTTGAACACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KALMSRIPTYKT*KRLGCLALNTG Trigger: GCCAGTGTTCAAGGCGAGGCATCCAAGCCTCTTCAATGTTTTATAGGTAGGTATTCTTGACATTAGTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCATTTTCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATGAATCATCAGCCGATGCAATGTaGCAGCCAGTGAGACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHFLLYLCLKLLVKDESSADAM*QPVRHL Trigger: CAGATGTCTCACTGGCTGTCACATTGCATCGGCTGA...TGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAAATGAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR GCA 90 bp | TACTACATTTGTCCCAAACTTTTTCACAGGTGGCTAATCTTAATGAAGATTCCCGCGAATCCTTGTGGTTaGATAAGCGGGGATCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: YYICPKLFHRWLILMKIPANPCG*ISGDHG Trigger: TCCATGATCCCCGCTTATGCAACCACAAGGATTCGC...GGGAATCTTCATTAAGATTAGCCACCTGTGAAAAAGTTTGGGACAAATGTAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR GCA 90 bp | TACTACATTTGTCCCAAACTTTTTCACAGGTGGCTAATCTTAATGAAGATTCCCAGGAACTTCAGCCGATaGAATGTGACAGCCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YYICPKLFHRWLILMKIPRNFSR*NVTASE Trigger: CTCACTGGCTGTCACATTGCATCGGCTGAAGTTCCT...GGGAATCTTCATTAAGATTAGCCACCTGTGAAAAAGTTTGGGACAAATGTAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCATTTTCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATGAATCAAAGGAGTGCGTCCAGTaGTACAGAATGAGGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSHFLLYLCLKLLVKDESKECVQ*YRMRWT Trigger: GGTCCACCTCATTCTGTACCACTGGACGCACTCCTT...TGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAAATGAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCATTTTCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATGAATCAGGCTGCGAATCCTTGTaGTTGCATAAGCGGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHFLLYLCLKLLVKDESGCESL*LHKRGS Trigger: TGATCCCCGCTTATGCAACCACAAGGATTCGCAGCC...TGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAAATGAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| 3UTR CAA 72 bp | ACCTATAAAACATTGAAGAGGCTTGGATGCCTCGCCTaGAACACTGGCACACATCTACCTCCAAATAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: TYKTLKRLGCLA*NTGTHLPPNKL Trigger: TAATTTATTTGGAGGTAGATGTGTGCCAGTGTTCAAGGCGAGGCATCCAAGCCTCTTCAATGTTTTATAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR TCA 90 bp | TACTACATTTGTCCCAAACTTTTTCACAGGTGGCTAATCTTAATGAAGATTCCCTCATGGAATCCACAGTaGGCTCAGGATGCAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: YYICPKLFHRWLILMKIPSWNPQ*AQDAKC Trigger: GCATTTTGCATCCTGAGCTCACTGTGGATTCCATGA...GGGAATCTTCATTAAGATTAGCCACCTGTGAAAAAGTTTGGGACAAATGTAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCATTTTCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATGAATCAAACCAACCACAAGGGTaGTGCCAAGAACTTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSHFLLYLCLKLLVKDESNQPQG*CQELLG Trigger: CCCCAAAAGTTCTTGGCAGCACCCTTGTGGTTGGTT...TGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAAATGAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCATTTTCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATGAATCACAATGTGACAGCCAGTaGGACATCTGCCAGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHFLLYLCLKLLVKDESQCDSQ*DICQCK Trigger: TTTACACTGGCAGATGTCTCACTGGCTGTCACATTG...TGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAAATGAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
||
| CDS-3UTR CCA 90 bp | TACTACATTTGTCCCAAACTTTTTCACAGGTGGCTAATCTTAATGAAGATTCCCTGTGTAAGCATCCATTaGCAAGGAGTCAAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YYICPKLFHRWLILMKIPCVSIH*QGVKKL Trigger: GAGCTTCTTGACTCCTTGCCAATGGATGCTTACACA...GGGAATCTTCATTAAGATTAGCCACCTGTGAAAAAGTTTGGGACAAATGTAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| 3UTR CAA 72 bp | CCTCAGAAACTAAGGTCATTAATGTTTTATCGTCACTaGAAACCTCTCACACATGCCAAACCAAATGGAACA | + |
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Preference number: 4 (lower is better) Translates to: PQKLRSLMFYRH*KPLTHAKPNGT Trigger: TGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACGATAAAACATTAATGACCTTAGTTTCTGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS-3UTR CAA 90 bp | TGCAATGTGACAGCCAGTGAGACATCTGCCAGTGTAAAGGATTCTCCACAGAGCATGAGGTGGACCTCCTaGTCCGGCGGGCCTTCAACC | + |
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Preference number: 5 (lower is better) Translates to: CNVTASETSASVKDSPQSMRWTS*SGGPST Trigger: GGTTGAAGGCCCGCCGGACAAGGAGGTCCACCTCAT...GCTCTGTGGAGAATCCTTTACACTGGCAGATGTCTCACTGGCTGTCACATTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| CDS-3UTR CAA 90 bp | GAAGGCCACTGGAGGTTAGCATCTACTGCTCTGTTCTGGATGTACTTCATTCTCATGAGGTGGACCTCCTaGTCCGGCGGGCCTTCAACC | + |
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Preference number: 5 (lower is better) Translates to: EGHWRLASTALFWMYFILMRWTS*SGGPST Trigger: GGTTGAAGGCCCGCCGGACAAGGAGGTCCACCTCAT...GAGAATGAAGTACATCCAGAACAGAGCAGTAGATGCTAACCTCCAGTGGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS TCA 90 bp | ACAGATTATGTTCTCCCCGTGGACAAGGACCGGTACTTCTCCAGCTaGGTTCAAGCGCATAAACCAAGGCTCATTGTGCTCACTCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: TDYVLPVDKDRYFSS*VQAHKPRLIVLTQG Trigger: CCCCTGAGTGAGCACAATGAGCCTTGGTTTATGCGCTTGAACTCAGCTGGAGAAGTACCGGTCCTTGTCCACGGGGAGAACATAATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS GCA 90 bp | GGTACTTCTCCAGCTGAGTTCAAGCGCATAAACCAAGGCTCATTGTaGTCACTCAGGGGCAGACTTACATCGTGTTCCTCGCACTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: GTSPAEFKRINQGSL*SLRGRLTSCSSHFS Trigger: ACTGAAGTGCGAGGAACACGATGTAAGTCTGCCCCTGAGTGAGCACAATGAGCCTTGGTTTATGCGCTTGAACTCAGCTGGAGAAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS GCA 90 bp | AGGAGTCAAGAAGCTCTCGGTAATGCTGCACCCGTGGGTAATACATaGTTCCTTCATCGGGCATTAACCTGGGTGTTCTTTCATCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RSQEALGNAAPVGNT*FLHRALTWVFFHPG Trigger: TCCTGGATGAAAGAACACCCAGGTTAATGCCCGATGAAGGAAGCATGTATTACCCACGGGTGCAGCATTACCGAGAGCTTCTTGACTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS-3UTR CAA 90 bp | GAAGGCCACTGGAGGTTAGCATCTACTGCTCTGTTCTGGATGTACTTCATTCTCTACCAAGCGCACCTTTaGAGAGCTGAAGGAGTGCGT | + |
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Preference number: 5 (lower is better) Translates to: EGHWRLASTALFWMYFILYQAHL*RAEGVR Trigger: ACGCACTCCTTCAGCTCTCAAAAGGTGCGCTTGGTA...GAGAATGAAGTACATCCAGAACAGAGCAGTAGATGCTAACCTCCAGTGGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS-3UTR CAA 90 bp | ATTCCGTGTGCTGCTACCACAGATCCCAACAAACCTAGAAATAATTTGGTCTGGTACCAAGCGCACCTTTaGAGAGCTGAAGGAGTGCGT | + |
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Preference number: 5 (lower is better) Translates to: IPCAATTDPNKPRNNLVWYQAHL*RAEGVR Trigger: ACGCACTCCTTCAGCTCTCAAAAGGTGCGCTTGGTA...CCAGACCAAATTATTTCTAGGTTTGTTGGGATCTGTGGTAGCAGCACACGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189736.2 |
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| CDS-3UTR CAA 90 bp | CGTCACTTGAAACCTCTCACACATGCCAAACCAAATGGAACAGTCTTAGACTACTGCGAATCCTTGTGGTaGCATAAGCGGGGATCATGG | + |
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Preference number: 5 (lower is better) Translates to: RHLKPLTHAKPNGTVLDYCESLW*HKRGSW Trigger: CCATGATCCCCGCTTATGCAACCACAAGGATTCGCA...GTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS-3UTR CAA 90 bp | CATCAGATTCTTGAAGCTTCTCCTAAGGCTTTGACAGCCAGCTCCAGGAAAACTGTGTGTAAGCATCCATaGGCAAGGAGTCAAGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: HQILEASPKALTASSRKTVCKHP*ARSQEA Trigger: AGCTTCTTGACTCCTTGCCAATGGATGCTTACACAC...AGTTTTCCTGGAGCTGGCTGTCAAAGCCTTAGGAGAAGCTTCAAGAATCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS-3UTR CAA 90 bp | CTTTCTCATTTTCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATGAATCACCACCCGGAATGCTGTaGGCAGCACCGCAGAGATTA | + |
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Preference number: 5 (lower is better) Translates to: LSHFLLYLCLKLLVKDESPPGML*AAPQRL Trigger: TAATCTCTGCGGTGCTGCCAACAGCATTCCGGGTGG...TGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAAATGAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS-3UTR CAA 90 bp | CTTTCTCATTTTCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATGAATCATCTGGCTGCGAATCCTaGTGGTTGCATAAGCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: LSHFLLYLCLKLLVKDESSGCES*WLHKRG Trigger: TCCCCGCTTATGCAACCACAAGGATTCGCAGCCAGA...TGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAAATGAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS-3UTR CAA 90 bp | CGTCACTTGAAACCTCTCACACATGCCAAACCAAATGGAACAGTCTTAGACTACTTAAGTCGCTTCTGTTaGGCAATGTATGCCTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: RHLKPLTHAKPNGTVLDYLSRFC*AMYASC Trigger: ACAAGAGGCATACATTGCCAAACAGAAGCGACTTAA...GTAGTCTAAGACTGTTCCATTTGGTTTGGCATGTGTGAGAGGTTTCAAGTGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS-3UTR CAA 90 bp | CTTTCTCATTTTCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATGAATCAGTCCCCAGTTTCGTCTaGCAAACCCCAGGAACTTCA | + |
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Preference number: 5 (lower is better) Translates to: LSHFLLYLCLKLLVKDESVPSFV*QTPGTS Trigger: TGAAGTTCCTGGGGTTTGCAAGACGAAACTGGGGAC...TGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAAATGAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS-3UTR CAA 90 bp | CTTTCTCATTTTCTCCTTTACTTATGCCTAAAGCTGCTAGTGAAAGATGAATCAATAAACCAAGGCTCATaGTGCTCACTCAGGGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LSHFLLYLCLKLLVKDESINQGS*CSLRGR Trigger: TCTGCCCCTGAGTGAGCACAATGAGCCTTGGTTTAT...TGATTCATCTTTCACTAGCAGCTTTAGGCATAAGTAAAGGAGAAAATGAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS CAA 72 bp | GAGTGCGTCCAGTGGTACAGAATGAGGTGGACCTCCTaGTCCGGCGGGCCTTCAACCCTCAGGGGCACACCG | + |
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Preference number: 6 (lower is better) Translates to: ECVQWYRMRWTS*SGGPSTLRGTP Trigger: CGGTGTGCCCCTGAGGGTTGAAGGCCCGCCGGACAAGGAGGTCCACCTCATTCTGTACCACTGGACGCACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026879.8 ENSMUST00000189736.2 |
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| CDS TCA 72 bp | GTTCTCCCCGTGGACAAGGACCGGTACTTCTCCAGCTaGGTTCAAGCGCATAAACCAAGGCTCATTGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VLPVDKDRYFSS*VQAHKPRLIVL Trigger: GAGCACAATGAGCCTTGGTTTATGCGCTTGAACTCAGCTGGAGAAGTACCGGTCCTTGTCCACGGGGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS GCA 72 bp | CCAGCTGAGTTCAAGCGCATAAACCAAGGCTCATTGTaGTCACTCAGGGGCAGACTTACATCGTGTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PAEFKRINQGSL*SLRGRLTSCSS Trigger: CGAGGAACACGATGTAAGTCTGCCCCTGAGTGAGCACAATGAGCCTTGGTTTATGCGCTTGAACTCAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS CAA 90 bp | ACCGGTACTTCTCCAGCTGAGTTCAAGCGCATAAACCAAGGCTCATaGTGCTCACTCAGGGGCAGACTTACATCGTGTTCCTCGCACTTC | + |
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Preference number: 6 (lower is better) Translates to: TGTSPAEFKRINQGS*CSLRGRLTSCSSHF Trigger: GAAGTGCGAGGAACACGATGTAAGTCTGCCCCTGAGTGAGCACAATGAGCCTTGGTTTATGCGCTTGAACTCAGCTGGAGAAGTACCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS CAA 72 bp | TCTCCAGCTGAGTTCAAGCGCATAAACCAAGGCTCATaGTGCTCACTCAGGGGCAGACTTACATCGTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SPAEFKRINQGS*CSLRGRLTSCS Trigger: GGAACACGATGTAAGTCTGCCCCTGAGTGAGCACAATGAGCCTTGGTTTATGCGCTTGAACTCAGCTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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| CDS GCA 72 bp | GAAGCTCTCGGTAATGCTGCACCCGTGGGTAATACATaGTTCCTTCATCGGGCATTAACCTGGGTGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: EALGNAAPVGNT*FLHRALTWVFF Trigger: AAAGAACACCCAGGTTAATGCCCGATGAAGGAAGCATGTATTACCCACGGGTGCAGCATTACCGAGAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026879.8 |
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