Pregenerated sensors for GDA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058624Ensembl transcript IDs: ENSMUST00000087600.10, ENSMUST00000121725.8, ENSMUST00000237823.2
Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CAGCCCAATGGGAGGCACTGTCATGAAATTACAATGCTCCCAGACTaGAGTGGAGAAGCAGCGCACTCCCTTCAAACAATTTACCAAGTG | + |
Preference number: 1 (lower is better) Translates to: QPNGRHCHEITMLPD*SGEAAHSLQTIYQV Trigger: CACTTGGTAAATTGTTTGAAGGGAGTGCGCTGCTTCTCCACTCCAGTCTGGGAGCATTGTAATTTCATGACAGTGCCTCCCATTGGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR CCA 90 bp | ACTGGAGTGGAGAAGCAGCGCACTCCCTTCAAACAATTTACCAAGTaGGCACTGGAAGGAGACACAGGAACAGAAGTCATCCAAAGAACA | + |
Preference number: 1 (lower is better) Translates to: TGVEKQRTPFKQFTK*ALEGDTGTEVIQRT Trigger: TGTTCTTTGGATGACTTCTGTTCCTGTGTCTCCTTCCAGTGCCCACTTGGTAAATTGTTTGAAGGGAGTGCGCTGCTTCTCCACTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR CCA 90 bp | ATATGCACACTGATGGAACGGGTACAATGTGCATCCCAGTGTGCCTaGAAGGCTTCTCATGTGTCTGCTTCCAAAGGGAAAGAGCTTAAA | + |
Preference number: 1 (lower is better) Translates to: ICTLMERVQCASQCA*KASHVSASKGKELK Trigger: TTTAAGCTCTTTCCCTTTGGAAGCAGACACATGAGAAGCCTTCCAGGCACACTGGGATGCACATTGTACCCGTTCCATCAGTGTGCATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR CCA 90 bp | AGAACATATTGCCAGATCTGGCACTCATGTTGCCTCTGTTTGCTTTaGGGGATATTTGAGGGCATACCTCAAAATCAGCAAAGCAATGAA | + |
Preference number: 1 (lower is better) Translates to: RTYCQIWHSCCLCLL*GIFEGIPQNQQSNE Trigger: TTCATTGCTTTGCTGATTTTGAGGTATGCCCTCAAATATCCCCCAAAGCAAACAGAGGCAACATGAGTGCCAGATCTGGCAATATGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR GCA 90 bp | CCTTTCATTTGTCTTGAAATGTTTTTCACTAAAGAAGCAAAGAAATaGAGTGTTCACAGGATTCATTTAGAAAGGCCCCCTCCTGGCATA | + |
Preference number: 1 (lower is better) Translates to: PFICLEMFFTKEAKK*SVHRIHLERPPPGI Trigger: TATGCCAGGAGGGGGCCTTTCTAAATGAATCCTGTGAACACTGCATTTCTTTGCTTCTTTAGTGAAAAACATTTCAAGACAAATGAAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR TCA 90 bp | TTTATTAGAAGTAATTCAACTGGCAGCACATTATCAGGACTAATCTaGATCTCAACAGGATGGTGTTACATTACCACTGCTATTCCTGCT | + |
Preference number: 1 (lower is better) Translates to: FIRSNSTGSTLSGLI*ISTGWCYITTAIPA Trigger: AGCAGGAATAGCAGTGGTAATGTAACACCATCCTGTTGAGATTCAGATTAGTCCTGATAATGTGCTGCCAGTTGAATTACTTCTAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR TCA 90 bp | CTAAGAGACTTTAAATCTTTAATACTCAACTTCTGCCGAACACTTTaGAGCATAGAACTATATTTGAAAAGCGTGTGGCATTCAGGTTCT | + |
Preference number: 1 (lower is better) Translates to: LRDFKSLILNFCRTL*SIELYLKSVWHSGS Trigger: AGAACCTGAATGCCACACGCTTTTCAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAAGTTGAGTATTAAAGATTTAAAGTCTCTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | ATGCTGGACATGCAGACTAAAGCCAGGGGTTGGATTTACTCACCGATATCCCACACAATGCTCCCAGACTaGAGTGGAGAAGCAGCGCAC | + |
Preference number: 2 (lower is better) Translates to: MLDMQTKARGWIYSPISHTMLPD*SGEAAH Trigger: GTGCGCTGCTTCTCCACTCCAGTCTGGGAGCATTGT...GTGGGATATCGGTGAGTAAATCCAACCCCTGGCTTTAGTCTGCATGTCCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR-3UTR GCA 90 bp | ATGCTGGACATGCAGACTAAAGCCAGGGGTTGGATTTACTCACCGATATCCCACCCTGTTCCTGGCCCTTaGTTGTTTATAGGAGGTGGA | + |
Preference number: 2 (lower is better) Translates to: MLDMQTKARGWIYSPISHPVPGP*LFIGGG Trigger: TCCACCTCCTATAAACAAGCAAGGGCCAGGAACAGG...GTGGGATATCGGTGAGTAAATCCAACCCCTGGCTTTAGTCTGCATGTCCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR CAA 90 bp | AAATGCACACCCTTCAAGAGGACAAGTGTGGGGTCTGTAAACCCTTaGGCAAGAGTCAAAACAGACAGCCTAAACAGTTGCCAGCCTCAG | + |
Preference number: 2 (lower is better) Translates to: KCTPFKRTSVGSVNP*ARVKTDSLNSCQPQ Trigger: CTGAGGCTGGCAACTGTTTAGGCTGTCTGTTTTGACTCTTGCCAAAGGGTTTACAGACCCCACACTTGTCCTCTTGAAGGGTGTGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | TCTGTGCGAGCACAATGCAAATCTAAACAGCCCAATGGGAGGCACTGTCATGAATTACCAAGTGGGCACTaGAAGGAGACACAGGAACAG | + |
Preference number: 2 (lower is better) Translates to: SVRAQCKSKQPNGRHCHELPSGH*KETQEQ Trigger: CTGTTCCTGTGTCTCCTTCCAGTGCCCACTTGGTAA...TTCATGACAGTGCCTCCCATTGGGCTGTTTAGATTTGCATTGTGCTCGCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | AAACAAACACACACAGAGCTCTTTCAGTATACTGGCCTTGCAGAGCCTTATCCAACAATGCTCCCAGACTaGAGTGGAGAAGCAGCGCAC | + |
Preference number: 2 (lower is better) Translates to: KQTHTELFQYTGLAEPYPTMLPD*SGEAAH Trigger: GTGCGCTGCTTCTCCACTCCAGTCTGGGAGCATTGT...TGGATAAGGCTCTGCAAGGCCAGTATACTGAAAGAGCTCTGTGTGTGTTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | AACAGAAGCAACTGGAACACCTCACAGCCAGGAATCAAGATGACTTTGAAGTACACAATGCTCCCAGACTaGAGTGGAGAAGCAGCGCAC | + |
Preference number: 2 (lower is better) Translates to: NRSNWNTSQPGIKMTLKYTMLPD*SGEAAH Trigger: GTGCGCTGCTTCTCCACTCCAGTCTGGGAGCATTGT...GTACTTCAAAGTCATCTTGATTCCTGGCTGTGAGGTGTTCCAGTTGCTTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | ATGCTGGACATGCAGACTAAAGCCAGGGGTTGGATTTACTCACCGATATCCCACGCTCTTTCAGTATACTaGCCTTGCAGAGCCTTATCC | + |
Preference number: 2 (lower is better) Translates to: MLDMQTKARGWIYSPISHALSVY*PCRALS Trigger: GGATAAGGCTCTGCAAGGCCAGTATACTGAAAGAGC...GTGGGATATCGGTGAGTAAATCCAACCCCTGGCTTTAGTCTGCATGTCCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | AAAAGCGTGTGGCATTCAGGTTCTGACATTCATCCCAAGAAGGGAAAGCATAACTTTCTGATTGGTCCCTaGGCACAAGGAAGATGGCGG | + |
Preference number: 2 (lower is better) Translates to: KSVWHSGSDIHPKKGKHNFLIGP*AQGRWR Trigger: CCGCCATCTTCCTTGTGCCCAGGGACCAATCAGAAA...GTTATGCTTTCCCTTCTTGGGATGAATGTCAGAACCTGAATGCCACACGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR TCA 90 bp | ATGCTGGACATGCAGACTAAAGCCAGGGGTTGGATTTACTCACCGATATCCCACTGTAAATATACTTTCTaGTTGGTCCCTGGGCACAAG | + |
Preference number: 2 (lower is better) Translates to: MLDMQTKARGWIYSPISHCKYTF*LVPGHK Trigger: CTTGTGCCCAGGGACCAATCAGAAAGTATATTTACA...GTGGGATATCGGTGAGTAAATCCAACCCCTGGCTTTAGTCTGCATGTCCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR-3UTR TCA 90 bp | AAACAAACACACACAGAGCTCTTTCAGTATACTGGCCTTGCAGAGCCTTATCCATGGGAGGCACTGTCATaGAATTACAATGCTCCCAGA | + |
Preference number: 2 (lower is better) Translates to: KQTHTELFQYTGLAEPYPWEALS*NYNAPR Trigger: TCTGGGAGCATTGTAATTTCATGACAGTGCCTCCCA...TGGATAAGGCTCTGCAAGGCCAGTATACTGAAAGAGCTCTGTGTGTGTTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR TCA 90 bp | ATGCTGGACATGCAGACTAAAGCCAGGGGTTGGATTTACTCACCGATATCCCACTCCAAGCACAACCAATaGCTTTTCCAATGTCTTTTC | + |
Preference number: 2 (lower is better) Translates to: MLDMQTKARGWIYSPISHSKHNQ*LFQCLF Trigger: GAAAAGACATTGGAAAAGTCATTGGTTGTGCTTGGA...GTGGGATATCGGTGAGTAAATCCAACCCCTGGCTTTAGTCTGCATGTCCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR-3UTR TCA 90 bp | TATGGAATAGGCAGGACAACCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTACTTCCCCGATTTATaGAAACTCCAGTCTACAGAG | + |
Preference number: 2 (lower is better) Translates to: YGIGRTTFLPSFLPSFLPYFPDL*KLQSTE Trigger: CTCTGTAGACTGGAGTTTTCATAAATCGGGGAAGTA...AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGTTGTCCTGCCTATTCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR-3UTR GCA 90 bp | TATGGAATAGGCAGGACAACCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCAGTATACTGGCCTTaGAGAGCCTTATCCATAATG | + |
Preference number: 2 (lower is better) Translates to: YGIGRTTFLPSFLPSFLPSVYWP*RALSIM Trigger: CATTATGGATAAGGCTCTGCAAGGCCAGTATACTGA...AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGTTGTCCTGCCTATTCCATA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR-3UTR CCA 90 bp | ATCAGGACTAATCTGAATCTCAACAGGATGGTGTTACATTACCACTGCTATTCCAGCCTCAGAGAGAAATaGGAGAGGGGAATCTGGCAG | + |
Preference number: 2 (lower is better) Translates to: IRTNLNLNRMVLHYHCYSSLREK*ERGIWQ Trigger: CTGCCAGATTCCCCTCTCCCATTTCTCTCTGAGGCT...GGAATAGCAGTGGTAATGTAACACCATCCTGTTGAGATTCAGATTAGTCCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR-3UTR TCA 90 bp | ATGCTGGACATGCAGACTAAAGCCAGGGGTTGGATTTACTCACCGATATCCCACTTCTGCCGAACACTTTaGAGCATAGAACTATATTTG | + |
Preference number: 2 (lower is better) Translates to: MLDMQTKARGWIYSPISHFCRTL*SIELYL Trigger: CAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAA...GTGGGATATCGGTGAGTAAATCCAACCCCTGGCTTTAGTCTGCATGTCCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR CAA 90 bp | AGATTTAGAACATATTGCCAGATCTGGCACTCATGTTGCCTCTGTTaGCTTTGGGGGATATTTGAGGGCATACCTCAAAATCAGCAAAGC | + |
Preference number: 2 (lower is better) Translates to: RFRTYCQIWHSCCLC*LWGIFEGIPQNQQS Trigger: GCTTTGCTGATTTTGAGGTATGCCCTCAAATATCCCCCAAAGCAAACAGAGGCAACATGAGTGCCAGATCTGGCAATATGTTCTAAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR-3UTR GCA 90 bp | ATCAGGACTAATCTGAATCTCAACAGGATGGTGTTACATTACCACTGCTATTCCGACAGCCTAAACAGTTaGCAGCCTCAGAGAGAAATG | + |
Preference number: 2 (lower is better) Translates to: IRTNLNLNRMVLHYHCYSDSLNS*QPQREM Trigger: CATTTCTCTCTGAGGCTGGCAACTGTTTAGGCTGTC...GGAATAGCAGTGGTAATGTAACACCATCCTGTTGAGATTCAGATTAGTCCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | AACAGAAGCAACTGGAACACCTCACAGCCAGGAATCAAGATGACTTTGAAGTACAATATACTTTCTGATTaGTCCCTGGGCACAAGGAAG | + |
Preference number: 2 (lower is better) Translates to: NRSNWNTSQPGIKMTLKYNILSD*SLGTRK Trigger: CTTCCTTGTGCCCAGGGACCAATCAGAAAGTATATT...GTACTTCAAAGTCATCTTGATTCCTGGCTGTGAGGTGTTCCAGTTGCTTCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR GCA 90 bp | AAAAGCGTGTGGCATTCAGGTTCTGACATTCATCCCAAGAAGGGAAAGCATAACCCTCTCATAAAAATCTaGTCATTGGTCCATACTGGA | + |
Preference number: 2 (lower is better) Translates to: KSVWHSGSDIHPKKGKHNPLIKI*SLVHTG Trigger: TCCAGTATGGACCAATGAGCAGATTTTTATGAGAGG...GTTATGCTTTCCCTTCTTGGGATGAATGTCAGAACCTGAATGCCACACGCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR GCA 90 bp | AAACAAACACACACAGAGCTCTTTCAGTATACTGGCCTTGCAGAGCCTTATCCACCTCTCATAAAAATCTaGTCATTGGTCCATACTGGA | + |
Preference number: 2 (lower is better) Translates to: KQTHTELFQYTGLAEPYPPLIKI*SLVHTG Trigger: TCCAGTATGGACCAATGAGCAGATTTTTATGAGAGG...TGGATAAGGCTCTGCAAGGCCAGTATACTGAAAGAGCTCTGTGTGTGTTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR GCA 90 bp | GAGGGGAATCTGGCAGCTCATTTTGATATTTCTGATGTGCTAGCAATGCTGGACCAACTATTTATGCCTTaGGGCTATGTGAATACTATC | + |
Preference number: 2 (lower is better) Translates to: EGNLAAHFDISDVLAMLDQLFMP*GYVNTI Trigger: GATAGTATTCACATAGCCGCAAGGCATAAATAGTTG...GTCCAGCATTGCTAGCACATCAGAAATATCAAAATGAGCTGCCAGATTCCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | ACTCTTTTCAAATATTTGAATAGTCCAGCAACAGCAACCTTAAAAGATGTCCACTTTCTGATTGGTCCCTaGGCACAAGGAAGATGGCGG | + |
Preference number: 2 (lower is better) Translates to: TLFKYLNSPATATLKDVHFLIGP*AQGRWR Trigger: CCGCCATCTTCCTTGTGCCCAGGGACCAATCAGAAA...GTGGACATCTTTTAAGGTTGCTGTTGCTGGACTATTCAAATATTTGAAAAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR-3UTR GCA 90 bp | CTTTCTTCTACAGAGAGCAAACCATTCAAACATAAAGTGACAACTGGGATAGGCTCTGTGCGAGCACAATaGAAATCTAAACAGCCCAAT | + |
Preference number: 2 (lower is better) Translates to: LSSTESKPFKHKVTTGIGSVRAQ*KSKQPN Trigger: ATTGGGCTGTTTAGATTTGCATTGTGCTCGCACAGA...GCCTATCCCAGTTGTCACTTTATGTTTGAATGGTTTGCTCTCTGTAGAAGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR-3UTR GCA 90 bp | CTCTCCCCTGTCTGCTTCTTCCCACGACATTATAAAGTGTATTGTGCAAAATCAGTGAGAACTAACTACTaGCTAATGGGTTTCTCTGTT | + |
Preference number: 2 (lower is better) Translates to: LSPVCFFPRHYKVYCAKSVRTNY*LMGFSV Trigger: AACAGAGAAACCCATTAGGCAGTAGTTAGTTCTCAC...TGATTTTGCACAATACACTTTATAATGTCGTGGGAAGAAGCAGACAGGGGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR CAA 90 bp | ACAGAGAGCAAACCATTCAAACATAAAGTGACAACTGGGATAGGCTaGGAACAGTGCCTATCCATAATTAGGAAAGTCAACCTACGTTAT | + |
Preference number: 2 (lower is better) Translates to: TESKPFKHKVTTGIG*EQCLSIIRKVNLRY Trigger: ATAACGTAGGTTGACTTTCCTAATTATGGATAGGCACTGTTCCAAGCCTATCCCAGTTGTCACTTTATGTTTGAATGGTTTGCTCTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR-3UTR TCA 90 bp | TCTCTCTCTCTCTTTCTCTCTCAAAATAAAACAAAGTACGACCTAAATGTGTACTGGGAGGCACTGTCATaGAATTACAATGCTCCCAGA | + |
Preference number: 2 (lower is better) Translates to: SLSLFLSQNKTKYDLNVYWEALS*NYNAPR Trigger: TCTGGGAGCATTGTAATTTCATGACAGTGCCTCCCA...GTACACATTTAGGTCGTACTTTGTTTTATTTTGAGAGAGAAAGAGAGAGAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | CTTTCTTCTACAGAGAGCAAACCATTCAAACATAAAGTGACAACTGGGATAGGCAATAAAACCTGTTCCTaGCCCTTGCTTGTTTATAGG | + |
Preference number: 2 (lower is better) Translates to: LSSTESKPFKHKVTTGIGNKTCS*PLLVYR Trigger: CCTATAAACAAGCAAGGGCCAGGAACAGGTTTTATT...GCCTATCCCAGTTGTCACTTTATGTTTGAATGGTTTGCTCTCTGTAGAAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR-3UTR TCA 90 bp | TATATGTTAATAAAACCTGTTCCTGGCCCTTGCTTGTTTATAGGAGGTGGAATTTACTTCCCCGATTTATaGAAACTCCAGTCTACAGAG | + |
Preference number: 2 (lower is better) Translates to: YMLIKPVPGPCLFIGGGIYFPDL*KLQSTE Trigger: CTCTGTAGACTGGAGTTTTCATAAATCGGGGAAGTA...AATTCCACCTCCTATAAACAAGCAAGGGCCAGGAACAGGTTTTATTAACATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | CACAAAGTGCAAATGTCCATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCAAACAATTTACCAAGTaGGCACTGGAAGGAGACACA | + |
Preference number: 2 (lower is better) Translates to: HKVQMSIDNVDLEACFKSKQFTK*ALEGDT Trigger: TGTGTCTCCTTCCAGTGCCCACTTGGTAAATTGTTT...GGATTTAAAACATGCTTCTAGATCGACATTGTCTATGGACATTTGCACTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR TCA 90 bp | AATACTCAACTTCTGCCGAACACTTTGAAGCATAGAACTATATTTGAAAAGCGTTGTAAATATACTTTCTaGTTGGTCCCTGGGCACAAG | + |
Preference number: 2 (lower is better) Translates to: NTQLLPNTLKHRTIFEKRCKYTF*LVPGHK Trigger: CTTGTGCCCAGGGACCAATCAGAAAGTATATTTACA...ACGCTTTTCAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAAGTTGAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR TCA 90 bp | ATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCAGTAGGTTCTCCTTTTACTGTAAATATACTTTCTaGTTGGTCCCTGGGCACAAG | + |
Preference number: 2 (lower is better) Translates to: IDNVDLEACFKSSRFSFYCKYTF*LVPGHK Trigger: CTTGTGCCCAGGGACCAATCAGAAAGTATATTTACA...GTAAAAGGAGAACCTACTGGATTTAAAACATGCTTCTAGATCGACATTGTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR GCA 90 bp | TCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCAATGACTTCTGTGCGAGCACAATaGAAATCTAAACAGCCCAAT | + |
Preference number: 2 (lower is better) Translates to: SPFTRLFSILNFQAQPMTSVRAQ*KSKQPN Trigger: ATTGGGCTGTTTAGATTTGCATTGTGCTCGCACAGA...AGTCATTGGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR GCA 90 bp | CACAAAGTGCAAATGTCCATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCTCAATGTCTAGCTTGTaGCCTCTCATAAAAATCTGC | + |
Preference number: 2 (lower is better) Translates to: HKVQMSIDNVDLEACFKSSMSSL*PLIKIC Trigger: GCAGATTTTTATGAGAGGGCACAAGCTAGACATTGA...GGATTTAAAACATGCTTCTAGATCGACATTGTCTATGGACATTTGCACTTTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | ATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCAGTAGGTTCTCCTTTTACAATATACTTTCTGATTaGTCCCTGGGCACAAGGAAG | + |
Preference number: 2 (lower is better) Translates to: IDNVDLEACFKSSRFSFYNILSD*SLGTRK Trigger: CTTCCTTGTGCCCAGGGACCAATCAGAAAGTATATT...GTAAAAGGAGAACCTACTGGATTTAAAACATGCTTCTAGATCGACATTGTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | ACTCTTTTCAAATATTTGAATAGTCCAGCAACAGCAACCTTAAAAGATGTCCACAAACAATTTACCAAGTaGGCACTGGAAGGAGACACA | + |
Preference number: 2 (lower is better) Translates to: TLFKYLNSPATATLKDVHKQFTK*ALEGDT Trigger: TGTGTCTCCTTCCAGTGCCCACTTGGTAAATTGTTT...GTGGACATCTTTTAAGGTTGCTGTTGCTGGACTATTCAAATATTTGAAAAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR-3UTR CCA 90 bp | AATACTCAACTTCTGCCGAACACTTTGAAGCATAGAACTATATTTGAAAAGCGTAAACAATTTACCAAGTaGGCACTGGAAGGAGACACA | + |
Preference number: 2 (lower is better) Translates to: NTQLLPNTLKHRTIFEKRKQFTK*ALEGDT Trigger: TGTGTCTCCTTCCAGTGCCCACTTGGTAAATTGTTT...ACGCTTTTCAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAAGTTGAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR CCA 90 bp | TATATGTTAATAAAACCTGTTCCTGGCCCTTGCTTGTTTATAGGAGGTGGAATTTTAGGGACTTGCACTTaGCTTTTAAGTTCTAGCACA | + |
Preference number: 2 (lower is better) Translates to: YMLIKPVPGPCLFIGGGILGTCT*LLSSST Trigger: TGTGCTAGAACTTAAAAGCCAAGTGCAAGTCCCTAA...AATTCCACCTCCTATAAACAAGCAAGGGCCAGGAACAGGTTTTATTAACATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
||
3UTR-3UTR CCA 90 bp | AATACTCAACTTCTGCCGAACACTTTGAAGCATAGAACTATATTTGAAAAGCGTCTCATTGGTCCATACTaGAGTTTCCTAATTTTCTTA | + |
Preference number: 2 (lower is better) Translates to: NTQLLPNTLKHRTIFEKRLIGPY*SFLIFL Trigger: TAAGAAAATTAGGAAACTCCAGTATGGACCAATGAG...ACGCTTTTCAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAAGTTGAGTATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
||
3UTR-3UTR CCA 90 bp | TCTCTCTCTCTCTTTCTCTCTCAAAATAAAACAAAGTACGACCTAAATGTGTACCTCATTGGTCCATACTaGAGTTTCCTAATTTTCTTA | + |
Preference number: 2 (lower is better) Translates to: SLSLFLSQNKTKYDLNVYLIGPY*SFLIFL Trigger: TAAGAAAATTAGGAAACTCCAGTATGGACCAATGAG...GTACACATTTAGGTCGTACTTTGTTTTATTTTGAGAGAGAAAGAGAGAGAGAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
||
3UTR GCA 72 bp | AACAGCCCAATGGGAGGCACTGTCATGAAATTACAATaGTCCCAGACTGGAGTGGAGAAGCAGCGCACTCCC | + |
Preference number: 3 (lower is better) Translates to: NSPMGGTVMKLQ*SQTGVEKQRTP Trigger: GGGAGTGCGCTGCTTCTCCACTCCAGTCTGGGAGCATTGTAATTTCATGACAGTGCCTCCCATTGGGCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
||
3UTR GCA 72 bp | CACACTGATGGAACGGGTACAATGTGCATCCCAGTGTaGCTGGAAGGCTTCTCATGTGTCTGCTTCCAAAGG | + |
Preference number: 3 (lower is better) Translates to: HTDGTGTMCIPV*LEGFSCVCFQR Trigger: CCTTTGGAAGCAGACACATGAGAAGCCTTCCAGGCACACTGGGATGCACATTGTACCCGTTCCATCAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
3UTR GCA 72 bp | TTGCATTTCACTAAACATGGACTAGGCCCACAACACTaGATCTCAGTGCTGGAGATGGGCAGGAAGGTGGGG | + |
Preference number: 3 (lower is better) Translates to: LHFTKHGLGPQH*ISVLEMGRKVG Trigger: CCCCACCTTCCTGCCCATCTCCAGCACTGAGATGCAGTGTTGTGGGCCTAGTCCATGTTTAGTGAAATGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
3UTR CCA 72 bp | GAGAAGCAGCGCACTCCCTTCAAACAATTTACCAAGTaGGCACTGGAAGGAGACACAGGAACAGAAGTCATC | + |
Preference number: 3 (lower is better) Translates to: EKQRTPFKQFTK*ALEGDTGTEVI Trigger: GATGACTTCTGTTCCTGTGTCTCCTTCCAGTGCCCACTTGGTAAATTGTTTGAAGGGAGTGCGCTGCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR CCA 72 bp | ATATACTTTCTGATTGGTCCCTGGGCACAAGGAAGATaGCGGAATCATGTCTTCCCAGGAGAATGTCGCAGA | + |
Preference number: 3 (lower is better) Translates to: IYFLIGPWAQGR*RNHVFPGECRR Trigger: TCTGCGACATTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGACCAATCAGAAAGTATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR CAA 90 bp | GAGGGGAATCTGGCAGCTCATTTTGATATTTCTGATGTGCTAGCAATGCTGGACTGGGTAGATTCAGCATaGCAAAGAACCCTGTCCCCT | + |
Preference number: 3 (lower is better) Translates to: EGNLAAHFDISDVLAMLDWVDSA*QRTLSP Trigger: AGGGGACAGGGTTCTTTGCAATGCTGAATCTACCCA...GTCCAGCATTGCTAGCACATCAGAAATATCAAAATGAGCTGCCAGATTCCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
||
3UTR CCA 72 bp | GATAGGAGGGTGAACTGTACAGCAATGATTATGCGTTaGGTAGATTCAGCATTGCAAAGAACCCTGTCCCCT | + |
Preference number: 3 (lower is better) Translates to: DRRVNCTAMIMR*VDSALQRTLSP Trigger: AGGGGACAGGGTTCTTTGCAATGCTGAATCTACCCAACGCATAATCATTGCTGTACAGTTCACCCTCCTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
||
3UTR CCA 72 bp | TGCCAGATCTGGCACTCATGTTGCCTCTGTTTGCTTTaGGGGATATTTGAGGGCATACCTCAAAATCAGCAA | + |
Preference number: 3 (lower is better) Translates to: CQIWHSCCLCLL*GIFEGIPQNQQ Trigger: TTGCTGATTTTGAGGTATGCCCTCAAATATCCCCCAAAGCAAACAGAGGCAACATGAGTGCCAGATCTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
3UTR CCA 72 bp | GATTCATTTAGAAAGGCCCCCTCCTGGCATACCCTCTaGGACTGTGAAGTCTTTGACAGTGTAAGTAAAGAA | + |
Preference number: 3 (lower is better) Translates to: DSFRKAPSWHTL*DCEVFDSVSKE Trigger: TTCTTTACTTACACTGTCAAAGACTTCACAGTCCCAGAGGGTATGCCAGGAGGGGGCCTTTCTAAATGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
3UTR-3UTR CAA 90 bp | AACAGAAGCAACTGGAACACCTCACAGCCAGGAATCAAGATGACTTTGAAGTACACTATTGGAAGCGCATaGCCAGCTGTTAACAATGTC | + |
Preference number: 3 (lower is better) Translates to: NRSNWNTSQPGIKMTLKYTIGSA*PAVNNV Trigger: GACATTGTTAACAGCTGGCAATGCGCTTCCAATAGT...GTACTTCAAAGTCATCTTGATTCCTGGCTGTGAGGTGTTCCAGTTGCTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
||
3UTR-3UTR CAA 90 bp | TATGGAATAGGCAGGACAACCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTATAAAAATCTGCTCATaGGTCCATACTGGAGTTTCC | + |
Preference number: 3 (lower is better) Translates to: YGIGRTTFLPSFLPSFLPIKICS*VHTGVS Trigger: GGAAACTCCAGTATGGACCAATGAGCAGATTTTTAT...AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGTTGTCCTGCCTATTCCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
3UTR GCA 72 bp | GCCTTGCAGAGCCTTATCCATAATGCTTTAGGGACTTaGACTTGGCTTTTAAGTTCTAGCACATTGATAGGA | + |
Preference number: 3 (lower is better) Translates to: ALQSLIHNALGT*TWLLSSSTLIG Trigger: TCCTATCAATGTGCTAGAACTTAAAAGCCAAGTGCAAGTCCCTAAAGCATTATGGATAAGGCTCTGCAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
||
3UTR GCA 72 bp | AGATTTAGAACATATTGCCAGATCTGGCACTCATGTTaGCTCTGTTTGCTTTGGGGGATATTTGAGGGCATA | + |
Preference number: 3 (lower is better) Translates to: RFRTYCQIWHSC*LCLLWGIFEGI Trigger: TATGCCCTCAAATATCCCCCAAAGCAAACAGAGGCAACATGAGTGCCAGATCTGGCAATATGTTCTAAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
3UTR GCA 72 bp | TATCAAGAGTTTTCTCTCAGTGACCTCTCCCCTGTCTaGTTCTTCCCACGACATTATAAAGTGTATTGTGCA | + |
Preference number: 3 (lower is better) Translates to: YQEFSLSDLSPV*FFPRHYKVYCA Trigger: TGCACAATACACTTTATAATGTCGTGGGAAGAAGCAGACAGGGGAGAGGTCACTGAGAGAAAACTCTTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
3UTR-3UTR CAA 90 bp | ATCAGGACTAATCTGAATCTCAACAGGATGGTGTTACATTACCACTGCTATTCCACTATTGGAAGCGCATaGCCAGCTGTTAACAATGTC | + |
Preference number: 3 (lower is better) Translates to: IRTNLNLNRMVLHYHCYSTIGSA*PAVNNV Trigger: GACATTGTTAACAGCTGGCAATGCGCTTCCAATAGT...GGAATAGCAGTGGTAATGTAACACCATCCTGTTGAGATTCAGATTAGTCCTGAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
||
3UTR-3UTR CAA 90 bp | TCTCTCTCTCTCTTTCTCTCTCAAAATAAAACAAAGTACGACCTAAATGTGTACTGGGTAGATTCAGCATaGCAAAGAACCCTGTCCCCT | + |
Preference number: 3 (lower is better) Translates to: SLSLFLSQNKTKYDLNVYWVDSA*QRTLSP Trigger: AGGGGACAGGGTTCTTTGCAATGCTGAATCTACCCA...GTACACATTTAGGTCGTACTTTGTTTTATTTTGAGAGAGAAAGAGAGAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
||
3UTR-3UTR CAA 90 bp | ACTCTTTTCAAATATTTGAATAGTCCAGCAACAGCAACCTTAAAAGATGTCCACAGACAGCCTAAACAGTaGCCAGCCTCAGAGAGAAAT | + |
Preference number: 3 (lower is better) Translates to: TLFKYLNSPATATLKDVHRQPKQ*PASERN Trigger: ATTTCTCTCTGAGGCTGGCAACTGTTTAGGCTGTCT...GTGGACATCTTTTAAGGTTGCTGTTGCTGGACTATTCAAATATTTGAAAAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
3UTR TCA 72 bp | AGTAATTCAACTGGCAGCACATTATCAGGACTAATCTaGATCTCAACAGGATGGTGTTACATTACCACTGCT | + |
Preference number: 3 (lower is better) Translates to: SNSTGSTLSGLI*ISTGWCYITTA Trigger: AGCAGTGGTAATGTAACACCATCCTGTTGAGATTCAGATTAGTCCTGATAATGTGCTGCCAGTTGAATTACT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
||
3UTR CCA 72 bp | GTGCCCTCTCATAAAAATCTGCTCATTGGTCCATACTaGAGTTTCCTAATTTTCTTAGTCATTAGCACAGAG | + |
Preference number: 3 (lower is better) Translates to: VPSHKNLLIGPY*SFLIFLVISTE Trigger: CTCTGTGCTAATGACTAAGAAAATTAGGAAACTCCAGTATGGACCAATGAGCAGATTTTTATGAGAGGGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR CAA 90 bp | TCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCAATGACTACTATTGGAAGCGCATaGCCAGCTGTTAACAATGTC | + |
Preference number: 3 (lower is better) Translates to: SPFTRLFSILNFQAQPMTTIGSA*PAVNNV Trigger: GACATTGTTAACAGCTGGCAATGCGCTTCCAATAGT...AGTCATTGGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR-3UTR CAA 90 bp | TTTGACAGTGTAAGTAAAGAACCAGGTAAGATAACACAACAGAGGAATCCAGCCAGCATAGAACTATATTaGAAAAGCGTGTGGCATTCA | + |
Preference number: 3 (lower is better) Translates to: FDSVSKEPGKITQQRNPASIELY*KSVWHS Trigger: TGAATGCCACACGCTTTTCAAATATAGTTCTATGCT...GGCTGGATTCCTCTGTTGTGTTATCTTACCTGGTTCTTTACTTACACTGTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR TCA 72 bp | CTGCCACGTGGTTATGACCTGGTTTTAGTTCTAATATaGGAAGGGACACCATATACGTTAGAAAAGCTAAAA | + |
Preference number: 3 (lower is better) Translates to: LPRGYDLVLVLI*EGTPYTLEKLK Trigger: TTTTAGCTTTTCTAACGTATATGGTGTCCCTTCTCATATTAGAACTAAAACCAGGTCATAACCACGTGGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR TCA 72 bp | AATCAGAAGGTTAGCAATAATGTAAGGGACACCTTCTaGTGGGCTTTTTGGGTAAGAAATAGACAGATAAGT | + |
Preference number: 3 (lower is better) Translates to: NQKVSNNVRDTF*WAFWVRNRQIS Trigger: ACTTATCTGTCTATTTCTTACCCAAAAAGCCCATCAGAAGGTGTCCCTTACATTATTGCTAACCTTCTGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR GCA 72 bp | AAGAACTGTGTGTTCTTAGATGTGAGAACTAACTACTaGCTAATGGGTTTCTCTGTTATAAGATACAATGGA | + |
Preference number: 3 (lower is better) Translates to: KNCVFLDVRTNY*LMGFSVIRYNG Trigger: TCCATTGTATCTTATAACAGAGAAACCCATTAGGCAGTAGTTAGTTCTCACATCTAAGAACACACAGTTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | CTGATTGGTCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAACCAGCAAAGGCATACTaGGGGGCATGGATGTGGGTA | + |
Preference number: 4 (lower is better) Translates to: LIGPWAQGRWRNHVFPGEPAKAY*GAWMWV Trigger: TACCCACATCCATGCCCCTCAGTATGCCTTTGCTGG...TTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGACCAATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | TCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAATGTCGCAGATCTCTCTGTCTCCTTaGCTGACTCCTCGGTGGTCT | + |
Preference number: 4 (lower is better) Translates to: SLGTRKMAESCLPRRMSQISLSP*LTPRWS Trigger: AGACCACCGAGGAGTCAGTCAAGGAGACAGAGAGAT...CTGCGACATTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | AATCTAAACAGCCCAATGGGAGGCACTGTCATGAAATTACAATGCTCCCAGACTCTCACGCCGAGGAGGTaGTCGCGAAGCACCTCCATG | + |
Preference number: 4 (lower is better) Translates to: NLNSPMGGTVMKLQCSQTLTPRR*SRSTSM Trigger: CATGGAGGTGCTTCGCGATCACCTCCTCGGCGTGAG...AGTCTGGGAGCATTGTAATTTCATGACAGTGCCTCCCATTGGGCTGTTTAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR TCA 90 bp | TCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAATGTCGCAGATCAATGGGAGAGTCTaGTGCTCTGGGGTTGATCAA | + |
Preference number: 4 (lower is better) Translates to: SLGTRKMAESCLPRRMSQINGRV*CSGVDQ Trigger: TTGATCAACCCCAGAGCATCAGACTCTCCCATTGAT...CTGCGACATTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | ATGCTGGACATGCAGACTAAAGCCAGGGGTTGGATTTACTCACCGATATCCCACAGCAAGCCGTGGTGGTaGCGTTCTTCAGTGTTCTCC | + |
Preference number: 4 (lower is better) Translates to: MLDMQTKARGWIYSPISHSKPWW*RSSVFS Trigger: GGAGAACACTGAAGAACGGCACCACCACGGCTTGCT...GTGGGATATCGGTGAGTAAATCCAACCCCTGGCTTTAGTCTGCATGTCCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | CTGATTGGTCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAAGGGTCTTGGCGATGTTaGCAAGTTCACTCATCAGAG | + |
Preference number: 4 (lower is better) Translates to: LIGPWAQGRWRNHVFPGEGSWRC*QVHSSE Trigger: CTCTGATGAGTGAACTTGGCAACATCGCCAAGACCC...TTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGACCAATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | GTCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAATGTCGCAAGAGTTGGGACAATGTaGAATGGATGCTCCTCGTTC | + |
Preference number: 4 (lower is better) Translates to: VPGHKEDGGIMSSQENVARVGTM*NGCSSF Trigger: GAACGAGGAGCATCCATTGCACATTGTCCCAACTCT...TGCGACATTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CCA 90 bp | TGGGCACTGGAAGGAGACACAGGAACAGAAGTCATCCAAAGAACACGGTACTTTCAGGTCCAGGTGGAGTaGACGAAAGTCCCTCGGAAG | + |
Preference number: 4 (lower is better) Translates to: WALEGDTGTEVIQRTRYFQVQVE*TKVPRK Trigger: CTTCCGAGGGACTTTCGTCCACTCCACCTGGACCTG...AAAGTACCGTGTTCTTTGGATGACTTCTGTTCCTGTGTCTCCTTCCAGTGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR CCA 90 bp | GTCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAATGTCGCAAGAAAGGGTAAAGCGTaGGGTCACTATGGGTTTCAC | + |
Preference number: 4 (lower is better) Translates to: VPGHKEDGGIMSSQENVARKGKA*GHYGFH Trigger: GTGAAACCCATAGTGACCCCACGCTTTACCCTTTCT...TGCGACATTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | ATGCTGGACATGCAGACTAAAGCCAGGGGTTGGATTTACTCACCGATATCCCACCGCAAGGATCAGGGATaGGTCAGTGTGAATTGTTCC | + |
Preference number: 4 (lower is better) Translates to: MLDMQTKARGWIYSPISHRKDQG*VSVNCS Trigger: GGAACAATTCACACTGACTCATCCCTGATCCTTGCG...GTGGGATATCGGTGAGTAAATCCAACCCCTGGCTTTAGTCTGCATGTCCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | TCTGGCACTCATGTTGCCTCTGTTTGCTTTGGGGGATATTTGAGGGCATACCTCGGGTCTTGGCGATGTTaGCAAGTTCACTCATCAGAG | + |
Preference number: 4 (lower is better) Translates to: SGTHVASVCFGGYLRAYLGSWRC*QVHSSE Trigger: CTCTGATGAGTGAACTTGGCAACATCGCCAAGACCC...GAGGTATGCCCTCAAATATCCCCCAAAGCAAACAGAGGCAACATGAGTGCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR CCA 90 bp | TCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAATGTCGCAGTCACTTATATGGCTCTaGATGTACAGATCATGGGTC | + |
Preference number: 4 (lower is better) Translates to: SLGTRKMAESCLPRRMSQSLIWL*MYRSWV Trigger: GACCCATGATCTGTACATCCAGAGCCATATAAGTGA...CTGCGACATTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | AATCTAAACAGCCCAATGGGAGGCACTGTCATGAAATTACAATGCTCCCAGACTCCAGCAAAGGCATACTaGGGGGCATGGATGTGGGTA | + |
Preference number: 4 (lower is better) Translates to: NLNSPMGGTVMKLQCSQTPAKAY*GAWMWV Trigger: TACCCACATCCATGCCCCTCAGTATGCCTTTGCTGG...AGTCTGGGAGCATTGTAATTTCATGACAGTGCCTCCCATTGGGCTGTTTAGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | CTGATTGGTCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAACTTTTGCAGCATTTCTaGCACAAATCTCTCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: LIGPWAQGRWRNHVFPGELLQHF*HKSLCL Trigger: GAGACAGAGAGATTTGTGTCAGAAATGCTGCAAAAG...TTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGACCAATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | AAAAGCGTGTGGCATTCAGGTTCTGACATTCATCCCAAGAAGGGAAAGCATAACAGCAAGCCGTGGTGGTaGCGTTCTTCAGTGTTCTCC | + |
Preference number: 4 (lower is better) Translates to: KSVWHSGSDIHPKKGKHNSKPWW*RSSVFS Trigger: GGAGAACACTGAAGAACGGCACCACCACGGCTTGCT...GTTATGCTTTCCCTTCTTGGGATGAATGTCAGAACCTGAATGCCACACGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | CTGATTGGTCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAATACTTTGCCCACAAATaGTCGCTGCCCAAATTTATC | + |
Preference number: 4 (lower is better) Translates to: LIGPWAQGRWRNHVFPGEYFAHK*SLPKFI Trigger: GATAAATTTGGGCAGCGAGCATTTGTGGGCAAAGTA...TTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGACCAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | TGGGCACTGGAAGGAGACACAGGAACAGAAGTCATCCAAAGAACACGGTACTTTGGGTCTTGGCGATGTTaGCAAGTTCACTCATCAGAG | + |
Preference number: 4 (lower is better) Translates to: WALEGDTGTEVIQRTRYFGSWRC*QVHSSE Trigger: CTCTGATGAGTGAACTTGGCAACATCGCCAAGACCC...AAAGTACCGTGTTCTTTGGATGACTTCTGTTCCTGTGTCTCCTTCCAGTGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CCA 90 bp | TTTGACAGTGTAAGTAAAGAACCAGGTAAGATAACACAACAGAGGAATCCAGCCTGGGGCAGGTCCAGGTaGAGTGGACGAAAGTCCCTC | + |
Preference number: 4 (lower is better) Translates to: FDSVSKEPGKITQQRNPAWGRSR*SGRKSL Trigger: GAGGGACTTTCGTCCACTCCACCTGGACCTGCCCCA...GGCTGGATTCCTCTGTTGTGTTATCTTACCTGGTTCTTTACTTACACTGTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR CCA 90 bp | TCTGGCACTCATGTTGCCTCTGTTTGCTTTGGGGGATATTTGAGGGCATACCTCAGAAAGGGTAAAGCGTaGGGTCACTATGGGTTTCAC | + |
Preference number: 4 (lower is better) Translates to: SGTHVASVCFGGYLRAYLRKGKA*GHYGFH Trigger: GTGAAACCCATAGTGACCCCACGCTTTACCCTTTCT...GAGGTATGCCCTCAAATATCCCCCAAAGCAAACAGAGGCAACATGAGTGCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR CAA 72 bp | CCCTTCAAGAGGACAAGTGTGGGGTCTGTAAACCCTTaGGCAAGAGTCAAAACAGACAGCCTAAACAGTTGC | + |
Preference number: 4 (lower is better) Translates to: PFKRTSVGSVNP*ARVKTDSLNSC Trigger: GCAACTGTTTAGGCTGTCTGTTTTGACTCTTGCCAAAGGGTTTACAGACCCCACACTTGTCCTCTTGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
||
CDS-3UTR TCA 90 bp | CGAGCACAATGCAAATCTAAACAGCCCAATGGGAGGCACTGTCATGAAATTACAATCTCTCTGTCTCCTTaGCTGACTCCTCGGTGGTCT | + |
Preference number: 4 (lower is better) Translates to: RAQCKSKQPNGRHCHEITISLSP*LTPRWS Trigger: AGACCACCGAGGAGTCAGTCAAGGAGACAGAGAGAT...TGTAATTTCATGACAGTGCCTCCCATTGGGCTGTTTAGATTTGCATTGTGCTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
||
CDS-3UTR TCA 90 bp | TATGGAATAGGCAGGACAACCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCTGATGCTCTGGGGTTaGTCAAGAGGGCATCAAATT | + |
Preference number: 4 (lower is better) Translates to: YGIGRTTFLPSFLPSFLPLMLWG*SRGHQI Trigger: AATTTGATGCCCTCTTGATCAACCCCAGAGCATCAG...AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGTTGTCCTGCCTATTCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
CDS-3UTR GCA 90 bp | TGGGCACTGGAAGGAGACACAGGAACAGAAGTCATCCAAAGAACACGGTACTTTAGAGTTGGGACAATGTaGAATGGATGCTCCTCGTTC | + |
Preference number: 4 (lower is better) Translates to: WALEGDTGTEVIQRTRYFRVGTM*NGCSSF Trigger: GAACGAGGAGCATCCATTGCACATTGTCCCAACTCT...AAAGTACCGTGTTCTTTGGATGACTTCTGTTCCTGTGTCTCCTTCCAGTGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
||
CDS-3UTR CCA 90 bp | GTCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAATGTCGCACGATTTTCACTTATATaGCTCTGGATGTACAGATCA | + |
Preference number: 4 (lower is better) Translates to: VPGHKEDGGIMSSQENVARFSLI*LWMYRS Trigger: TGATCTGTACATCCAGAGCCATATAAGTGAAAATCG...TGCGACATTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
||
CDS-3UTR TCA 90 bp | TCTGGCACTCATGTTGCCTCTGTTTGCTTTGGGGGATATTTGAGGGCATACCTCCTTTTGCAGCATTTCTaGCACAAATCTCTCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: SGTHVASVCFGGYLRAYLLLQHF*HKSLCL Trigger: GAGACAGAGAGATTTGTGTCAGAAATGCTGCAAAAG...GAGGTATGCCCTCAAATATCCCCCAAAGCAAACAGAGGCAACATGAGTGCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
CDS-3UTR GCA 90 bp | ATGCTGGACATGCAGACTAAAGCCAGGGGTTGGATTTACTCACCGATATCCCACAAGGTAGCAGCCATGTaGCATTACTGTCTTGTTTGT | + |
Preference number: 4 (lower is better) Translates to: MLDMQTKARGWIYSPISHKVAAM*HYCLVC Trigger: ACAAACAAGACAGTAATGGCACATGGCTGCTACCTT...GTGGGATATCGGTGAGTAAATCCAACCCCTGGCTTTAGTCTGCATGTCCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
||
CDS-3UTR GCA 90 bp | TCTGGCACTCATGTTGCCTCTGTTTGCTTTGGGGGATATTTGAGGGCATACCTCATTGGAAACCATGACTaGTCTTCTGATGGCATCAAG | + |
Preference number: 4 (lower is better) Translates to: SGTHVASVCFGGYLRAYLIGNHD*SSDGIK Trigger: CTTGATGCCATCAGAAGAGCAGTCATGGTTTCCAAT...GAGGTATGCCCTCAAATATCCCCCAAAGCAAACAGAGGCAACATGAGTGCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR CCA 90 bp | ATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCAGTAGGTTCTCCTTTTACCGCGAAGCACCTCCATaGGGCAGGTCCAGGTGGAGT | + |
Preference number: 4 (lower is better) Translates to: IDNVDLEACFKSSRFSFYREAPP*GRSRWS Trigger: ACTCCACCTGGACCTGCCCCATGGAGGTGCTTCGCG...GTAAAAGGAGAACCTACTGGATTTAAAACATGCTTCTAGATCGACATTGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
CDS-3UTR CCA 90 bp | TCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAATGTCGCAGGGAACCTTTGTTCTGTaGGAAATGTATACTTATTCA | + |
Preference number: 4 (lower is better) Translates to: SLGTRKMAESCLPRRMSQGTFVL*EMYTYS Trigger: TGAATAAGTATACATTTCCCACAGAACAAAGGTTCC...CTGCGACATTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | CAGTACATTAACAATAAGCAAAATCATACAGATACCGAGGGGAAGGATGTCCCCCGCAAGGATCAGGGATaGGTCAGTGTGAATTGTTCC | + |
Preference number: 4 (lower is better) Translates to: QYINNKQNHTDTEGKDVPRKDQG*VSVNCS Trigger: GGAACAATTCACACTGACTCATCCCTGATCCTTGCG...GGGGACATCCTTCCCCTCGGTATCTGTATGATTTTGCTTATTGTTAATGTACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
CDS-3UTR TCA 90 bp | AAACAAACACACACAGAGCTCTTTCAGTATACTGGCCTTGCAGAGCCTTATCCACTGATGCTCTGGGGTTaGTCAAGAGGGCATCAAATT | + |
Preference number: 4 (lower is better) Translates to: KQTHTELFQYTGLAEPYPLMLWG*SRGHQI Trigger: AATTTGATGCCCTCTTGATCAACCCCAGAGCATCAG...TGGATAAGGCTCTGCAAGGCCAGTATACTGAAAGAGCTCTGTGTGTGTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | AAACAAACACACACAGAGCTCTTTCAGTATACTGGCCTTGCAGAGCCTTATCCAATCAATGGGAGAGTCTaGTGCTCTGGGGTTGATCAA | + |
Preference number: 4 (lower is better) Translates to: KQTHTELFQYTGLAEPYPINGRV*CSGVDQ Trigger: TTGATCAACCCCAGAGCATCAGACTCTCCCATTGAT...TGGATAAGGCTCTGCAAGGCCAGTATACTGAAAGAGCTCTGTGTGTGTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | TCTGTGCGAGCACAATGCAAATCTAAACAGCCCAATGGGAGGCACTGTCATGAAATTGGAAACCATGACTaGTCTTCTGATGGCATCAAG | + |
Preference number: 4 (lower is better) Translates to: SVRAQCKSKQPNGRHCHEIGNHD*SSDGIK Trigger: CTTGATGCCATCAGAAGAGCAGTCATGGTTTCCAAT...TTCATGACAGTGCCTCCCATTGGGCTGTTTAGATTTGCATTGTGCTCGCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR CAA 72 bp | GGCACTCATGTTGCCTCTGTTTGCTTTGGGGGATATTaGAGGGCATACCTCAAAATCAGCAAAGCAATGAAG | + |
Preference number: 4 (lower is better) Translates to: GTHVASVCFGGY*RAYLKISKAMK Trigger: CTTCATTGCTTTGCTGATTTTGAGGTATGCCCTCAAATATCCCCCAAAGCAAACAGAGGCAACATGAGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
||
CDS-3UTR TCA 90 bp | AGTAGGTTCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCCCAGCAAAGGCATACTaGGGGGCATGGATGTGGGTA | + |
Preference number: 4 (lower is better) Translates to: SRFSFYETVLYIKFPSTTPAKAY*GAWMWV Trigger: TACCCACATCCATGCCCCTCAGTATGCCTTTGCTGG...GGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGAACCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | GAGGGGAATCTGGCAGCTCATTTTGATATTTCTGATGTGCTAGCAATGCTGGACAAGGTAGCAGCCATGTaGCATTACTGTCTTGTTTGT | + |
Preference number: 4 (lower is better) Translates to: EGNLAAHFDISDVLAMLDKVAAM*HYCLVC Trigger: ACAAACAAGACAGTAATGGCACATGGCTGCTACCTT...GTCCAGCATTGCTAGCACATCAGAAATATCAAAATGAGCTGCCAGATTCCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | TCTGTGCGAGCACAATGCAAATCTAAACAGCCCAATGGGAGGCACTGTCATGAAGGGCATCAAATTCCTTaGCAACTTCAAAGTTTCCAA | + |
Preference number: 4 (lower is better) Translates to: SVRAQCKSKQPNGRHCHEGHQIP*QLQSFQ Trigger: TTGGAAACTTTGAAGTTGGCAAGGAATTTGATGCCC...TTCATGACAGTGCCTCCCATTGGGCTGTTTAGATTTGCATTGTGCTCGCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR CAA 72 bp | ACATATTGCCAGATCTGGCACTCATGTTGCCTCTGTTaGCTTTGGGGGATATTTGAGGGCATACCTCAAAAT | + |
Preference number: 4 (lower is better) Translates to: TYCQIWHSCCLC*LWGIFEGIPQN Trigger: ATTTTGAGGTATGCCCTCAAATATCCCCCAAAGCAAACAGAGGCAACATGAGTGCCAGATCTGGCAATATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR TCA 90 bp | GAGGGGAATCTGGCAGCTCATTTTGATATTTCTGATGTGCTAGCAATGCTGGACGCCAGTTTTTCTTGCTaGGATGATTCTTCTAGAAAC | + |
Preference number: 4 (lower is better) Translates to: EGNLAAHFDISDVLAMLDASFSC*DDSSRN Trigger: GTTTCTAGAAGAATCATCTCAGCAAGAAAAACTGGC...GTCCAGCATTGCTAGCACATCAGAAATATCAAAATGAGCTGCCAGATTCCCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | AGTAGGTTCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCATCTCTCTGTCTCCTTaGCTGACTCCTCGGTGGTCT | + |
Preference number: 4 (lower is better) Translates to: SRFSFYETVLYIKFPSTTISLSP*LTPRWS Trigger: AGACCACCGAGGAGTCAGTCAAGGAGACAGAGAGAT...GGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGAACCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | AATACTCAACTTCTGCCGAACACTTTGAAGCATAGAACTATATTTGAAAAGCGTAGCAAGCCGTGGTGGTaGCGTTCTTCAGTGTTCTCC | + |
Preference number: 4 (lower is better) Translates to: NTQLLPNTLKHRTIFEKRSKPWW*RSSVFS Trigger: GGAGAACACTGAAGAACGGCACCACCACGGCTTGCT...ACGCTTTTCAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAAGTTGAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | AATCTAAACAGCCCAATGGGAGGCACTGTCATGAAATTACAATGCTCCCAGACTAAGGTAGCAGCCATGTaGCATTACTGTCTTGTTTGT | + |
Preference number: 4 (lower is better) Translates to: NLNSPMGGTVMKLQCSQTKVAAM*HYCLVC Trigger: ACAAACAAGACAGTAATGGCACATGGCTGCTACCTT...AGTCTGGGAGCATTGTAATTTCATGACAGTGCCTCCCATTGGGCTGTTTAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | AAAAGCGTGTGGCATTCAGGTTCTGACATTCATCCCAAGAAGGGAAAGCATAACATTGGAAACCATGACTaGTCTTCTGATGGCATCAAG | + |
Preference number: 4 (lower is better) Translates to: KSVWHSGSDIHPKKGKHNIGNHD*SSDGIK Trigger: CTTGATGCCATCAGAAGAGCAGTCATGGTTTCCAAT...GTTATGCTTTCCCTTCTTGGGATGAATGTCAGAACCTGAATGCCACACGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CCA 90 bp | AAACAAACACACACAGAGCTCTTTCAGTATACTGGCCTTGCAGAGCCTTATCCATCACTTATATGGCTCTaGATGTACAGATCATGGGTC | + |
Preference number: 4 (lower is better) Translates to: KQTHTELFQYTGLAEPYPSLIWL*MYRSWV Trigger: GACCCATGATCTGTACATCCAGAGCCATATAAGTGA...TGGATAAGGCTCTGCAAGGCCAGTATACTGAAAGAGCTCTGTGTGTGTTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | TCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCAATGACTCAACAAGGCCTGGCATaGAGAACTCATGGTGGCTCA | + |
Preference number: 4 (lower is better) Translates to: SPFTRLFSILNFQAQPMTQQGLA*RTHGGS Trigger: TGAGCCACCATGAGTTCTTCATGCCAGGCCTTGTTG...AGTCATTGGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTTTCTCTCTCAAAATAAAACAAAGTACGACCTAAATGTGTACCAACAAGGCCTGGCATaGAGAACTCATGGTGGCTCA | + |
Preference number: 4 (lower is better) Translates to: SLSLFLSQNKTKYDLNVYQQGLA*RTHGGS Trigger: TGAGCCACCATGAGTTCTTCATGCCAGGCCTTGTTG...GTACACATTTAGGTCGTACTTTGTTTTATTTTGAGAGAGAAAGAGAGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR CCA 90 bp | CAGTACATTAACAATAAGCAAAATCATACAGATACCGAGGGGAAGGATGTCCCCTTCTCTGATCTCACATaGTTTGAAGCACCACTCCTT | + |
Preference number: 4 (lower is better) Translates to: QYINNKQNHTDTEGKDVPFSDLT*FEAPLL Trigger: AAGGAGTGGTGCTTCAAACCATGTGAGATCAGAGAA...GGGGACATCCTTCCCCTCGGTATCTGTATGATTTTGCTTATTGTTAATGTACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR CCA 90 bp | GAGGGGAATCTGGCAGCTCATTTTGATATTTCTGATGTGCTAGCAATGCTGGACCGATTTTCACTTATATaGCTCTGGATGTACAGATCA | + |
Preference number: 4 (lower is better) Translates to: EGNLAAHFDISDVLAMLDRFSLI*LWMYRS Trigger: TGATCTGTACATCCAGAGCCATATAAGTGAAAATCG...GTCCAGCATTGCTAGCACATCAGAAATATCAAAATGAGCTGCCAGATTCCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | ATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCAGTAGGTTCTCCTTTTACCGCAAGGATCAGGGATaGGTCAGTGTGAATTGTTCC | + |
Preference number: 4 (lower is better) Translates to: IDNVDLEACFKSSRFSFYRKDQG*VSVNCS Trigger: GGAACAATTCACACTGACTCATCCCTGATCCTTGCG...GTAAAAGGAGAACCTACTGGATTTAAAACATGCTTCTAGATCGACATTGTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | ATCAGGACTAATCTGAATCTCAACAGGATGGTGTTACATTACCACTGCTATTCCCTTTTGCAGCATTTCTaGCACAAATCTCTCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: IRTNLNLNRMVLHYHCYSLLQHF*HKSLCL Trigger: GAGACAGAGAGATTTGTGTCAGAAATGCTGCAAAAG...GGAATAGCAGTGGTAATGTAACACCATCCTGTTGAGATTCAGATTAGTCCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR TCA 90 bp | CACAAAGTGCAAATGTCCATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCCTGATGCTCTGGGGTTaGTCAAGAGGGCATCAAATT | + |
Preference number: 4 (lower is better) Translates to: HKVQMSIDNVDLEACFKSLMLWG*SRGHQI Trigger: AATTTGATGCCCTCTTGATCAACCCCAGAGCATCAG...GGATTTAAAACATGCTTCTAGATCGACATTGTCTATGGACATTTGCACTTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CCA 90 bp | AGTAGGTTCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCAGAAAGGGTAAAGCGTaGGGTCACTATGGGTTTCAC | + |
Preference number: 4 (lower is better) Translates to: SRFSFYETVLYIKFPSTTRKGKA*GHYGFH Trigger: GTGAAACCCATAGTGACCCCACGCTTTACCCTTTCT...GGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGAACCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | ATCAGGACTAATCTGAATCTCAACAGGATGGTGTTACATTACCACTGCTATTCCCCCACAAATGCTCGCTaGCCAAATTTATCTGTAATT | + |
Preference number: 4 (lower is better) Translates to: IRTNLNLNRMVLHYHCYSPTNAR*PNLSVI Trigger: AATTACAGATAAATTTGGGCAGCGAGCATTTGTGGG...GGAATAGCAGTGGTAATGTAACACCATCCTGTTGAGATTCAGATTAGTCCTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | AAAAGCGTGTGGCATTCAGGTTCTGACATTCATCCCAAGAAGGGAAAGCATAACTATCATTCAAATCCATaGATACTTTGCCCACAAATG | + |
Preference number: 4 (lower is better) Translates to: KSVWHSGSDIHPKKGKHNYHSNP*ILCPQM Trigger: CATTTGTGGGCAAAGTATGCATGGATTTGAATGATA...GTTATGCTTTCCCTTCTTGGGATGAATGTCAGAACCTGAATGCCACACGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | AATCTAAACAGCCCAATGGGAGGCACTGTCATGAAATTACAATGCTCCCAGACTTATCATTCAAATCCATaGATACTTTGCCCACAAATG | + |
Preference number: 4 (lower is better) Translates to: NLNSPMGGTVMKLQCSQTYHSNP*ILCPQM Trigger: CATTTGTGGGCAAAGTATGCATGGATTTGAATGATA...AGTCTGGGAGCATTGTAATTTCATGACAGTGCCTCCCATTGGGCTGTTTAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTTTCTCTCTCAAAATAAAACAAAGTACGACCTAAATGTGTACAGAGTTGGGACAATGTaGAATGGATGCTCCTCGTTC | + |
Preference number: 4 (lower is better) Translates to: SLSLFLSQNKTKYDLNVYRVGTM*NGCSSF Trigger: GAACGAGGAGCATCCATTGCACATTGTCCCAACTCT...GTACACATTTAGGTCGTACTTTGTTTTATTTTGAGAGAGAAAGAGAGAGAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | ATCAGGACTAATCTGAATCTCAACAGGATGGTGTTACATTACCACTGCTATTCCGGGCATCAAATTCCTTaGCAACTTCAAAGTTTCCAA | + |
Preference number: 4 (lower is better) Translates to: IRTNLNLNRMVLHYHCYSGHQIP*QLQSFQ Trigger: TTGGAAACTTTGAAGTTGGCAAGGAATTTGATGCCC...GGAATAGCAGTGGTAATGTAACACCATCCTGTTGAGATTCAGATTAGTCCTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR CCA 90 bp | ATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCAGTAGGTTCTCCTTTTACGGTATCAACAAGGCCTaGCATGAAGAACTCATGGTG | + |
Preference number: 4 (lower is better) Translates to: IDNVDLEACFKSSRFSFYGINKA*HEELMV Trigger: CACCATGAGTTCTTCATGCCAGGCCTTGTTGATACC...GTAAAAGGAGAACCTACTGGATTTAAAACATGCTTCTAGATCGACATTGTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR CCA 90 bp | AATACTCAACTTCTGCCGAACACTTTGAAGCATAGAACTATATTTGAAAAGCGTGGTATCAACAAGGCCTaGCATGAAGAACTCATGGTG | + |
Preference number: 4 (lower is better) Translates to: NTQLLPNTLKHRTIFEKRGINKA*HEELMV Trigger: CACCATGAGTTCTTCATGCCAGGCCTTGTTGATACC...ACGCTTTTCAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAAGTTGAGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | CAGTACATTAACAATAAGCAAAATCATACAGATACCGAGGGGAAGGATGTCCCCTATCATTCAAATCCATaGATACTTTGCCCACAAATG | + |
Preference number: 4 (lower is better) Translates to: QYINNKQNHTDTEGKDVPYHSNP*ILCPQM Trigger: CATTTGTGGGCAAAGTATGCATGGATTTGAATGATA...GGGGACATCCTTCCCCTCGGTATCTGTATGATTTTGCTTATTGTTAATGTACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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3UTR CAA 72 bp | AAACCATTCAAACATAAAGTGACAACTGGGATAGGCTaGGAACAGTGCCTATCCATAATTAGGAAAGTCAAC | + |
Preference number: 4 (lower is better) Translates to: KPFKHKVTTGIG*EQCLSIIRKVN Trigger: GTTGACTTTCCTAATTATGGATAGGCACTGTTCCAAGCCTATCCCAGTTGTCACTTTATGTTTGAATGGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR TCA 90 bp | AGTAGGTTCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCGCCAGTTTTTCTTGCTaGGATGATTCTTCTAGAAAC | + |
Preference number: 4 (lower is better) Translates to: SRFSFYETVLYIKFPSTTASFSC*DDSSRN Trigger: GTTTCTAGAAGAATCATCTCAGCAAGAAAAACTGGC...GGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGAACCTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
||
CDS-3UTR GCA 90 bp | ATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCAGTAGGTTCTCCTTTTACTACTTTGCCCACAAATaGTCGCTGCCCAAATTTATC | + |
Preference number: 4 (lower is better) Translates to: IDNVDLEACFKSSRFSFYYFAHK*SLPKFI Trigger: GATAAATTTGGGCAGCGAGCATTTGTGGGCAAAGTA...GTAAAAGGAGAACCTACTGGATTTAAAACATGCTTCTAGATCGACATTGTCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTTTCTCTCTCAAAATAAAACAAAGTACGACCTAAATGTGTACTACTTTGCCCACAAATaGTCGCTGCCCAAATTTATC | + |
Preference number: 4 (lower is better) Translates to: SLSLFLSQNKTKYDLNVYYFAHK*SLPKFI Trigger: GATAAATTTGGGCAGCGAGCATTTGTGGGCAAAGTA...GTACACATTTAGGTCGTACTTTGTTTTATTTTGAGAGAGAAAGAGAGAGAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR CCA 90 bp | AATACTCAACTTCTGCCGAACACTTTGAAGCATAGAACTATATTTGAAAAGCGTTTCTCTGATCTCACATaGTTTGAAGCACCACTCCTT | + |
Preference number: 4 (lower is better) Translates to: NTQLLPNTLKHRTIFEKRFSDLT*FEAPLL Trigger: AAGGAGTGGTGCTTCAAACCATGTGAGATCAGAGAA...ACGCTTTTCAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAAGTTGAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | ATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCAGTAGGTTCTCCTTTTACCCCACAAATGCTCGCTaGCCAAATTTATCTGTAATT | + |
Preference number: 4 (lower is better) Translates to: IDNVDLEACFKSSRFSFYPTNAR*PNLSVI Trigger: AATTACAGATAAATTTGGGCAGCGAGCATTTGTGGG...GTAAAAGGAGAACCTACTGGATTTAAAACATGCTTCTAGATCGACATTGTCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR GCA 90 bp | AATACTCAACTTCTGCCGAACACTTTGAAGCATAGAACTATATTTGAAAAGCGTGGGCATCAAATTCCTTaGCAACTTCAAAGTTTCCAA | + |
Preference number: 4 (lower is better) Translates to: NTQLLPNTLKHRTIFEKRGHQIP*QLQSFQ Trigger: TTGGAAACTTTGAAGTTGGCAAGGAATTTGATGCCC...ACGCTTTTCAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAAGTTGAGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CCA 90 bp | CACAAAGTGCAAATGTCCATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCCGATTTTCACTTATATaGCTCTGGATGTACAGATCA | + |
Preference number: 4 (lower is better) Translates to: HKVQMSIDNVDLEACFKSRFSLI*LWMYRS Trigger: TGATCTGTACATCCAGAGCCATATAAGTGAAAATCG...GGATTTAAAACATGCTTCTAGATCGACATTGTCTATGGACATTTGCACTTTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CCA 90 bp | CACAAAGTGCAAATGTCCATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCGGAACCTTTGTTCTGTaGGAAATGTATACTTATTCA | + |
Preference number: 4 (lower is better) Translates to: HKVQMSIDNVDLEACFKSGTFVL*EMYTYS Trigger: TGAATAAGTATACATTTCCCACAGAACAAAGGTTCC...GGATTTAAAACATGCTTCTAGATCGACATTGTCTATGGACATTTGCACTTTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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3UTR CAA 72 bp | ACATTACCACTGCTATTCCTGCTTCCAGAATTACATTaGCCTATATTACTGCATGTGAGTCTTAAGTTTAAA | + |
Preference number: 4 (lower is better) Translates to: TLPLLFLLPELH*PILLHVSLKFK Trigger: TTTAAACTTAAGACTCACATGCAGTAATATAGGCAAATGTAATTCTGGAAGCAGGAATAGCAGTGGTAATGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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3UTR CAA 72 bp | TACCTGTTAACAGCTAAGATGACTCTTTTCAAATATTaGAATAGTCCAGCAACAGCAACCTTAAAAGATGTC | + |
Preference number: 4 (lower is better) Translates to: YLLTAKMTLFKY*NSPATATLKDV Trigger: GACATCTTTTAAGGTTGCTGTTGCTGGACTATTCAAATATTTGAAAAGAGTCATCTTAGCTGTTAACAGGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTTTCTCTCTCAAAATAAAACAAAGTACGACCTAAATGTGTACGGAACCTTTGTTCTGTaGGAAATGTATACTTATTCA | + |
Preference number: 4 (lower is better) Translates to: SLSLFLSQNKTKYDLNVYGTFVL*EMYTYS Trigger: TGAATAAGTATACATTTCCCACAGAACAAAGGTTCC...GTACACATTTAGGTCGTACTTTGTTTTATTTTGAGAGAGAAAGAGAGAGAGAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS CCA 90 bp | TGCCGCTGTCGCTCACGCCGAGGAGGTGATCGCGAAGCACCTCCATaGGGCAGGTCCAGGTGGAGTGGACGAAAGTCCCTCGGAAGACGA | + |
Preference number: 5 (lower is better) Translates to: CRCRSRRGGDREAPP*GRSRWSGRKSLGRR Trigger: TCGTCTTCCGAGGGACTTTCGTCCACTCCACCTGGACCTGCCCCATGGAGGTGCTTCGCGATCACCTCCTCGGCGTGAGCGACAGCGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS TCA 90 bp | TCTTCTAGAAACACTATTTTGCCGCTGTCGCTCACGCCGAGGAGGTaGTCGCGAAGCACCTCCATGGGGCAGGTCCAGGTGGAGTGGACG | + |
Preference number: 5 (lower is better) Translates to: SSRNTILPLSLTPRR*SRSTSMGQVQVEWT Trigger: CGTCCACTCCACCTGGACCTGCCCCATGGAGGTGCTTCGCGATCACCTCCTCGGCGTGAGCGACAGCGGCAAAATAGTGTTTCTAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS TCA 90 bp | CACTCCAAAAGCGGCAGGTCAACGTTGCTTCCAGCAAAGGCATACTaGGGGGCATGGATGTGGGTATCAACAAGGCCTGGCATGAAGAAC | + |
Preference number: 5 (lower is better) Translates to: HSKSGRSTLLPAKAY*GAWMWVSTRPGMKN Trigger: GTTCTTCATGCCAGGCCTTGTTGATACCCACATCCATGCCCCTCAGTATGCCTTTGCTGGAAGCAACGTTGACCTGCCGCTTTTGGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | GTCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAATGTCGCATGGGTCTTGGCGATGTaGCCAAGTTCACTCATCAGA | + |
Preference number: 5 (lower is better) Translates to: VPGHKEDGGIMSSQENVAWVLAM*PSSLIR Trigger: TCTGATGAGTGAACTTGGCAACATCGCCAAGACCCA...TGCGACATTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | TGGGCACTGGAAGGAGACACAGGAACAGAAGTCATCCAAAGAACACGGTACTTTAATCTCTCTGTCTCCTaGACTGACTCCTCGGTGGTC | + |
Preference number: 5 (lower is better) Translates to: WALEGDTGTEVIQRTRYFNLSVS*TDSSVV Trigger: GACCACCGAGGAGTCAGTCAAGGAGACAGAGAGATT...AAAGTACCGTGTTCTTTGGATGACTTCTGTTCCTGTGTCTCCTTCCAGTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | CTGATTGGTCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAAAGCGACAGATTAGAGTaGGGACAATGTGCAATGGAT | + |
Preference number: 5 (lower is better) Translates to: LIGPWAQGRWRNHVFPGESDRLE*GQCAMD Trigger: ATCCATTGCACATTGTCCCAACTCTAATCTGTCGCT...TTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGACCAATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | GTCCCTGGGCACAAGGAAGATGGCGGAATCATGTCTTCCCAGGAGAATGTCGCAAGGGCATCAAATTCCTaGCCAACTTCAAAGTTTCCA | + |
Preference number: 5 (lower is better) Translates to: VPGHKEDGGIMSSQENVARASNS*PTSKFP Trigger: TGGAAACTTTGAAGTTGGCAAGGAATTTGATGCCCT...TGCGACATTCTCCTGGGAAGACATGATTCCGCCATCTTCCTTGTGCCCAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS TCA 90 bp | TGCTCGCTGCCCAAATTTATCTGTAATTTCCGCAAGGATCAGGGATaGGTCAGTGTGAATTGTTCCAAAGTAGCAAGCCGTGGTGGTGCC | + |
Preference number: 5 (lower is better) Translates to: CSLPKFICNFRKDQG*VSVNCSKVASRGGA Trigger: GGCACCACCACGGCTTGCTACTTTGGAACAATTCACACTGACTCATCCCTGATCCTTGCGGAAATTACAGATAAATTTGGGCAGCGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS GCA 90 bp | GAAATGTATACTTATTCAGCCACTCCAAAAGCGGCAGGTCAACGTTaGTTCCAGCAAAGGCATACTGAGGGGCATGGATGTGGGTATCAA | + |
Preference number: 5 (lower is better) Translates to: EMYTYSATPKAAGQR*FQQRHTEGHGCGYQ Trigger: TTGATACCCACATCCATGCCCCTCAGTATGCCTTTGCTGGAAGCAACGTTGACCTGCCGCTTTTGGAGTGGCTGAATAAGTATACATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CCA 90 bp | GCCAAGTTCACTCATCAGAGTCTCCGTGCAAGAAAGGGTAAAGCGTaGGGTCACTATGGGTTTCACCCTTGGATAATTCTTTTGCAGCAT | + |
Preference number: 5 (lower is better) Translates to: AKFTHQSLRARKGKA*GHYGFHPWIILLQH Trigger: ATGCTGCAAAAGAATTATCCAAGGGTGAAACCCATAGTGACCCCACGCTTTACCCTTTCTTGCACGGAGACTCTGATGAGTGAACTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AAACAAACACACACAGAGCTCTTTCAGTATACTGGCCTTGCAGAGCCTTATCCACTGATCTCACATGGTTaGAAGCACCACTCCTTGGCC | + |
Preference number: 5 (lower is better) Translates to: KQTHTELFQYTGLAEPYPLISHG*KHHSLA Trigger: GGCCAAGGAGTGGTGCTTCAAACCATGTGAGATCAG...TGGATAAGGCTCTGCAAGGCCAGTATACTGAAAGAGCTCTGTGTGTGTTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AACAGAAGCAACTGGAACACCTCACAGCCAGGAATCAAGATGACTTTGAAGTACAATCTCTCTGTCTCCTaGACTGACTCCTCGGTGGTC | + |
Preference number: 5 (lower is better) Translates to: NRSNWNTSQPGIKMTLKYNLSVS*TDSSVV Trigger: GACCACCGAGGAGTCAGTCAAGGAGACAGAGAGATT...GTACTTCAAAGTCATCTTGATTCCTGGCTGTGAGGTGTTCCAGTTGCTTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AAACAAACACACACAGAGCTCTTTCAGTATACTGGCCTTGCAGAGCCTTATCCAAATCTCTCTGTCTCCTaGACTGACTCCTCGGTGGTC | + |
Preference number: 5 (lower is better) Translates to: KQTHTELFQYTGLAEPYPNLSVS*TDSSVV Trigger: GACCACCGAGGAGTCAGTCAAGGAGACAGAGAGATT...TGGATAAGGCTCTGCAAGGCCAGTATACTGAAAGAGCTCTGTGTGTGTTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CCA 90 bp | TGTAGACTTCTTCAGCCACATCAGTGCTCCGGAACCTTTGTTCTGTaGGAAATGTATACTTATTCAGCCACTCCAAAAGCGGCAGGTCAA | + |
Preference number: 5 (lower is better) Translates to: CRLLQPHQCSGTFVL*EMYTYSATPKAAGQ Trigger: TTGACCTGCCGCTTTTGGAGTGGCTGAATAAGTATACATTTCCCACAGAACAAAGGTTCCGGAGCACTGATGTGGCTGAAGAAGTCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | CGAGCACAATGCAAATCTAAACAGCCCAATGGGAGGCACTGTCATGAAATTACATGGGTCTTGGCGATGTaGCCAAGTTCACTCATCAGA | + |
Preference number: 5 (lower is better) Translates to: RAQCKSKQPNGRHCHEITWVLAM*PSSLIR Trigger: TCTGATGAGTGAACTTGGCAACATCGCCAAGACCCA...TGTAATTTCATGACAGTGCCTCCCATTGGGCTGTTTAGATTTGCATTGTGCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | TCTGTGCGAGCACAATGCAAATCTAAACAGCCCAATGGGAGGCACTGTCATGAAAGCGACAGATTAGAGTaGGGACAATGTGCAATGGAT | + |
Preference number: 5 (lower is better) Translates to: SVRAQCKSKQPNGRHCHESDRLE*GQCAMD Trigger: ATCCATTGCACATTGTCCCAACTCTAATCTGTCGCT...TTCATGACAGTGCCTCCCATTGGGCTGTTTAGATTTGCATTGTGCTCGCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CCA 90 bp | CACGATTTTCACTTATATGGCTCTGGATGTACAGATCATGGGTCTTaGCGATGTTGCCAAGTTCACTCATCAGAGTCTCCGTGCAAGAAA | + |
Preference number: 5 (lower is better) Translates to: HDFHLYGSGCTDHGS*RCCQVHSSESPCKK Trigger: TTTCTTGCACGGAGACTCTGATGAGTGAACTTGGCAACATCGCCAAGACCCATGATCTGTACATCCAGAGCCATATAAGTGAAAATCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AACAGAAGCAACTGGAACACCTCACAGCCAGGAATCAAGATGACTTTGAAGTACAAATCCATGCATACTTaGCCCACAAATGCTCGCTGC | + |
Preference number: 5 (lower is better) Translates to: NRSNWNTSQPGIKMTLKYKSMHT*PTNARC Trigger: GCAGCGAGCATTTGTGGGCAAAGTATGCATGGATTT...GTACTTCAAAGTCATCTTGATTCCTGGCTGTGAGGTGTTCCAGTTGCTTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | CGAGCACAATGCAAATCTAAACAGCCCAATGGGAGGCACTGTCATGAAATTACATCCTCGGTGGTCTCCTaGTATTCTGGAACAGTATCA | + |
Preference number: 5 (lower is better) Translates to: RAQCKSKQPNGRHCHEITSSVVS*YSGTVS Trigger: TGATACTGTTCCAGAATACAAGGAGACCACCGAGGA...TGTAATTTCATGACAGTGCCTCCCATTGGGCTGTTTAGATTTGCATTGTGCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CCA 90 bp | ATTTCTTCACGATTTTCACTTATATGGCTCTGGATGTACAGATCATaGGTCTTGGCGATGTTGCCAAGTTCACTCATCAGAGTCTCCGTG | + |
Preference number: 5 (lower is better) Translates to: ISSRFSLIWLWMYRS*VLAMLPSSLIRVSV Trigger: CACGGAGACTCTGATGAGTGAACTTGGCAACATCGCCAAGACCCATGATCTGTACATCCAGAGCCATATAAGTGAAAATCGTGAAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AACAGAAGCAACTGGAACACCTCACAGCCAGGAATCAAGATGACTTTGAAGTACAGTGCTCCGGAACCTTaGTTCTGTGGGAAATGTATA | + |
Preference number: 5 (lower is better) Translates to: NRSNWNTSQPGIKMTLKYSAPEP*FCGKCI Trigger: TATACATTTCCCACAGAACAAAGGTTCCGGAGCACT...GTACTTCAAAGTCATCTTGATTCCTGGCTGTGAGGTGTTCCAGTTGCTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AACAGAAGCAACTGGAACACCTCACAGCCAGGAATCAAGATGACTTTGAAGTACATGAGTCAGTGTGAATaGTTCCAAAGTAGCAAGCCG | + |
Preference number: 5 (lower is better) Translates to: NRSNWNTSQPGIKMTLKYMSQCE*FQSSKP Trigger: CGGCTTGCTACTTTGGAACAATTCACACTGACTCAT...GTACTTCAAAGTCATCTTGATTCCTGGCTGTGAGGTGTTCCAGTTGCTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | CTCTCCCCTGTCTGCTTCTTCCCACGACATTATAAAGTGTATTGTGCAAAATCAAAATCCATGCATACTTaGCCCACAAATGCTCGCTGC | + |
Preference number: 5 (lower is better) Translates to: LSPVCFFPRHYKVYCAKSKSMHT*PTNARC Trigger: GCAGCGAGCATTTGTGGGCAAAGTATGCATGGATTT...TGATTTTGCACAATACACTTTATAATGTCGTGGGAAGAAGCAGACAGGGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR CAA 90 bp | CTCTCCCCTGTCTGCTTCTTCCCACGACATTATAAAGTGTATTGTGCAAAATCATCCTCGGTGGTCTCCTaGTATTCTGGAACAGTATCA | + |
Preference number: 5 (lower is better) Translates to: LSPVCFFPRHYKVYCAKSSSVVS*YSGTVS Trigger: TGATACTGTTCCAGAATACAAGGAGACCACCGAGGA...TGATTTTGCACAATACACTTTATAATGTCGTGGGAAGAAGCAGACAGGGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR CAA 90 bp | GAGGGGAATCTGGCAGCTCATTTTGATATTTCTGATGTGCTAGCAATGCTGGACCTATGGGTTTCACCCTaGGATAATTCTTTTGCAGCA | + |
Preference number: 5 (lower is better) Translates to: EGNLAAHFDISDVLAMLDLWVSP*DNSFAA Trigger: TGCTGCAAAAGAATTATCCAAGGGTGAAACCCATAG...GTCCAGCATTGCTAGCACATCAGAAATATCAAAATGAGCTGCCAGATTCCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS CCA 90 bp | CTTTTCACGGCTTCAATTTCTTCACGATTTTCACTTATATGGCTCTaGATGTACAGATCATGGGTCTTGGCGATGTTGCCAAGTTCACTC | + |
Preference number: 5 (lower is better) Translates to: LFTASISSRFSLIWL*MYRSWVLAMLPSSL Trigger: GAGTGAACTTGGCAACATCGCCAAGACCCATGATCTGTACATCCAGAGCCATATAAGTGAAAATCGTGAAGAAATTGAAGCCGTGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AGTAGGTTCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCCTGATCTCACATGGTTaGAAGCACCACTCCTTGGCC | + |
Preference number: 5 (lower is better) Translates to: SRFSFYETVLYIKFPSTTLISHG*KHHSLA Trigger: GGCCAAGGAGTGGTGCTTCAAACCATGTGAGATCAG...GGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGAACCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | ATCAGGACTAATCTGAATCTCAACAGGATGGTGTTACATTACCACTGCTATTCCTCCTCGGTGGTCTCCTaGTATTCTGGAACAGTATCA | + |
Preference number: 5 (lower is better) Translates to: IRTNLNLNRMVLHYHCYSSSVVS*YSGTVS Trigger: TGATACTGTTCCAGAATACAAGGAGACCACCGAGGA...GGAATAGCAGTGGTAATGTAACACCATCCTGTTGAGATTCAGATTAGTCCTGAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AAAAGCGTGTGGCATTCAGGTTCTGACATTCATCCCAAGAAGGGAAAGCATAACCTATGGGTTTCACCCTaGGATAATTCTTTTGCAGCA | + |
Preference number: 5 (lower is better) Translates to: KSVWHSGSDIHPKKGKHNLWVSP*DNSFAA Trigger: TGCTGCAAAAGAATTATCCAAGGGTGAAACCCATAG...GTTATGCTTTCCCTTCTTGGGATGAATGTCAGAACCTGAATGCCACACGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | CTCTCCCCTGTCTGCTTCTTCCCACGACATTATAAAGTGTATTGTGCAAAATCAAGCGACAGATTAGAGTaGGGACAATGTGCAATGGAT | + |
Preference number: 5 (lower is better) Translates to: LSPVCFFPRHYKVYCAKSSDRLE*GQCAMD Trigger: ATCCATTGCACATTGTCCCAACTCTAATCTGTCGCT...TGATTTTGCACAATACACTTTATAATGTCGTGGGAAGAAGCAGACAGGGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS-3UTR CAA 90 bp | AATCTAAACAGCCCAATGGGAGGCACTGTCATGAAATTACAATGCTCCCAGACTAGGGCATCAAATTCCTaGCCAACTTCAAAGTTTCCA | + |
Preference number: 5 (lower is better) Translates to: NLNSPMGGTVMKLQCSQTRASNS*PTSKFP Trigger: TGGAAACTTTGAAGTTGGCAAGGAATTTGATGCCCT...AGTCTGGGAGCATTGTAATTTCATGACAGTGCCTCCCATTGGGCTGTTTAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS GCA 90 bp | ACAGTATCATTCAAATCCATGCATACTTTGCCCACAAATGCTCGCTaGCCAAATTTATCTGTAATTTCCGCAAGGATCAGGGATGAGTCA | + |
Preference number: 5 (lower is better) Translates to: TVSFKSMHTLPTNAR*PNLSVISARIRDES Trigger: TGACTCATCCCTGATCCTTGCGGAAATTACAGATAAATTTGGGCAGCGAGCATTTGTGGGCAAAGTATGCATGGATTTGAATGATACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS GCA 90 bp | TTCTGGAACAGTATCATTCAAATCCATGCATACTTTGCCCACAAATaGTCGCTGCCCAAATTTATCTGTAATTTCCGCAAGGATCAGGGA | + |
Preference number: 5 (lower is better) Translates to: FWNSIIQIHAYFAHK*SLPKFICNFRKDQG Trigger: TCCCTGATCCTTGCGGAAATTACAGATAAATTTGGGCAGCGAGCATTTGTGGGCAAAGTATGCATGGATTTGAATGATACTGTTCCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AATACTCAACTTCTGCCGAACACTTTGAAGCATAGAACTATATTTGAAAAGCGTTCTAGAAACACTATTTaGCCGCTGTCGCTCACGCCG | + |
Preference number: 5 (lower is better) Translates to: NTQLLPNTLKHRTIFEKRSRNTI*PLSLTP Trigger: CGGCGTGAGCGACAGCGGCAAAATAGTGTTTCTAGA...ACGCTTTTCAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAAGTTGAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS CCA 90 bp | TATAAGCTTTTCACGGCTTCAATTTCTTCACGATTTTCACTTATATaGCTCTGGATGTACAGATCATGGGTCTTGGCGATGTTGCCAAGT | + |
Preference number: 5 (lower is better) Translates to: YKLFTASISSRFSLI*LWMYRSWVLAMLPS Trigger: ACTTGGCAACATCGCCAAGACCCATGATCTGTACATCCAGAGCCATATAAGTGAAAATCGTGAAGAAATTGAAGCCGTGAAAAGCTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | ATAGACAATGTCGATCTAGAAGCATGTTTTAAATCCAGTAGGTTCTCCTTTTACTGGGTCTTGGCGATGTaGCCAAGTTCACTCATCAGA | + |
Preference number: 5 (lower is better) Translates to: IDNVDLEACFKSSRFSFYWVLAM*PSSLIR Trigger: TCTGATGAGTGAACTTGGCAACATCGCCAAGACCCA...GTAAAAGGAGAACCTACTGGATTTAAAACATGCTTCTAGATCGACATTGTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | ATCAGGACTAATCTGAATCTCAACAGGATGGTGTTACATTACCACTGCTATTCCAGGGCATCAAATTCCTaGCCAACTTCAAAGTTTCCA | + |
Preference number: 5 (lower is better) Translates to: IRTNLNLNRMVLHYHCYSRASNS*PTSKFP Trigger: TGGAAACTTTGAAGTTGGCAAGGAATTTGATGCCCT...GGAATAGCAGTGGTAATGTAACACCATCCTGTTGAGATTCAGATTAGTCCTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AGTAGGTTCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCATGAGTCAGTGTGAATaGTTCCAAAGTAGCAAGCCG | + |
Preference number: 5 (lower is better) Translates to: SRFSFYETVLYIKFPSTTMSQCE*FQSSKP Trigger: CGGCTTGCTACTTTGGAACAATTCACACTGACTCAT...GGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGAACCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | TCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCAATGACTAAATCCATGCATACTTaGCCCACAAATGCTCGCTGC | + |
Preference number: 5 (lower is better) Translates to: SPFTRLFSILNFQAQPMTKSMHT*PTNARC Trigger: GCAGCGAGCATTTGTGGGCAAAGTATGCATGGATTT...AGTCATTGGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | AATACTCAACTTCTGCCGAACACTTTGAAGCATAGAACTATATTTGAAAAGCGTAGTGCTCCGGAACCTTaGTTCTGTGGGAAATGTATA | + |
Preference number: 5 (lower is better) Translates to: NTQLLPNTLKHRTIFEKRSAPEP*FCGKCI Trigger: TATACATTTCCCACAGAACAAAGGTTCCGGAGCACT...ACGCTTTTCAAATATAGTTCTATGCTTCAAAGTGTTCGGCAGAAGTTGAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | TCTCCTTTTACGAGACTGTTCTCTATATTAAATTTCCAAGCACAACCAATGACTATGAGTCAGTGTGAATaGTTCCAAAGTAGCAAGCCG | + |
Preference number: 5 (lower is better) Translates to: SPFTRLFSILNFQAQPMTMSQCE*FQSSKP Trigger: CGGCTTGCTACTTTGGAACAATTCACACTGACTCAT...AGTCATTGGTTGTGCTTGGAAATTTAATATAGAGAACAGTCTCGTAAAAGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS-3UTR CAA 90 bp | ACTCTTTTCAAATATTTGAATAGTCCAGCAACAGCAACCTTAAAAGATGTCCACCTATGGGTTTCACCCTaGGATAATTCTTTTGCAGCA | + |
Preference number: 5 (lower is better) Translates to: TLFKYLNSPATATLKDVHLWVSP*DNSFAA Trigger: TGCTGCAAAAGAATTATCCAAGGGTGAAACCCATAG...GTGGACATCTTTTAAGGTTGCTGTTGCTGGACTATTCAAATATTTGAAAAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS CCA 72 bp | TCGCGAAGCACCTCCATGGGGCAGGTCCAGGTGGAGTaGACGAAAGTCCCTCGGAAGACGAGCGCCAGCGGC | + |
Preference number: 6 (lower is better) Translates to: SRSTSMGQVQVE*TKVPRKTSASG Trigger: GCCGCTGGCGCTCGTCTTCCGAGGGACTTTCGTCCACTCCACCTGGACCTGCCCCATGGAGGTGCTTCGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS CCA 72 bp | CGCTCACGCCGAGGAGGTGATCGCGAAGCACCTCCATaGGGCAGGTCCAGGTGGAGTGGACGAAAGTCCCTC | + |
Preference number: 6 (lower is better) Translates to: RSRRGGDREAPP*GRSRWSGRKSL Trigger: GAGGGACTTTCGTCCACTCCACCTGGACCTGCCCCATGGAGGTGCTTCGCGATCACCTCCTCGGCGTGAGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS TCA 72 bp | AACACTATTTTGCCGCTGTCGCTCACGCCGAGGAGGTaGTCGCGAAGCACCTCCATGGGGCAGGTCCAGGTG | + |
Preference number: 6 (lower is better) Translates to: NTILPLSLTPRR*SRSTSMGQVQV Trigger: CACCTGGACCTGCCCCATGGAGGTGCTTCGCGATCACCTCCTCGGCGTGAGCGACAGCGGCAAAATAGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087600.10 |
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CDS TCA 72 bp | AGCGGCAGGTCAACGTTGCTTCCAGCAAAGGCATACTaGGGGGCATGGATGTGGGTATCAACAAGGCCTGGC | + |
Preference number: 6 (lower is better) Translates to: SGRSTLLPAKAY*GAWMWVSTRPG Trigger: GCCAGGCCTTGTTGATACCCACATCCATGCCCCTCAGTATGCCTTTGCTGGAAGCAACGTTGACCTGCCGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 90 bp | GGAGAGTCTGATGCTCTGGGGTTGATCAAGAGGGCATCAAATTCCTaGCCAACTTCAAAGTTTCCAATCTCGCTATCAAGCCCCAGGGCT | + |
Preference number: 6 (lower is better) Translates to: GESDALGLIKRASNS*PTSKFPISLSSPRA Trigger: AGCCCTGGGGCTTGATAGCGAGATTGGAAACTTTGAAGTTGGCAAGGAATTTGATGCCCTCTTGATCAACCCCAGAGCATCAGACTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CCA 72 bp | ATACTGAGGGGCATGGATGTGGGTATCAACAAGGCCTaGCATGAAGAACTCATGGTGGCTCAGTTCTCTGAT | + |
Preference number: 6 (lower is better) Translates to: ILRGMDVGINKA*HEELMVAQFSD Trigger: ATCAGAGAACTGAGCCACCATGAGTTCTTCATGCCAGGCCTTGTTGATACCCACATCCATGCCCCTCAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087600.10 ENSMUST00000237823.2 |
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CDS CAA 72 bp | ACGTTCAGTAAGCCACTGCTCAGCGACAGATTAGAGTaGGGACAATGTGCAATGGATGCTCCTCGTTCACTG | + |
Preference number: 6 (lower is better) Translates to: TFSKPLLSDRLE*GQCAMDAPRSL Trigger: CAGTGAACGAGGAGCATCCATTGCACATTGTCCCAACTCTAATCTGTCGCTGAGCAGTGGCTTACTGAACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS GCA 72 bp | GCCACTGCTCAGCGACAGATTAGAGTTGGGACAATGTaGAATGGATGCTCCTCGTTCACTGAAGATGTTAAG | + |
Preference number: 6 (lower is better) Translates to: ATAQRQIRVGTM*NGCSSFTEDVK Trigger: CTTAACATCTTCAGTGAACGAGGAGCATCCATTGCACATTGTCCCAACTCTAATCTGTCGCTGAGCAGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CCA 72 bp | CACTTATATGGCTCTGGATGTACAGATCATGGGTCTTaGCGATGTTGCCAAGTTCACTCATCAGAGTCTCCG | + |
Preference number: 6 (lower is better) Translates to: HLYGSGCTDHGS*RCCQVHSSESP Trigger: CGGAGACTCTGATGAGTGAACTTGGCAACATCGCCAAGACCCATGATCTGTACATCCAGAGCCATATAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 90 bp | ACCTCAAGCACGTTCAGTAAGCCACTGCTCAGCGACAGATTAGAGTaGGGACAATGTGCAATGGATGCTCCTCGTTCACTGAAGATGTTA | + |
Preference number: 6 (lower is better) Translates to: TSSTFSKPLLSDRLE*GQCAMDAPRSLKML Trigger: TAACATCTTCAGTGAACGAGGAGCATCCATTGCACATTGTCCCAACTCTAATCTGTCGCTGAGCAGTGGCTTACTGAACGTGCTTGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CCA 72 bp | CTTCAGCCACATCAGTGCTCCGGAACCTTTGTTCTGTaGGAAATGTATACTTATTCAGCCACTCCAAAAGCG | + |
Preference number: 6 (lower is better) Translates to: LQPHQCSGTFVL*EMYTYSATPKA Trigger: CGCTTTTGGAGTGGCTGAATAAGTATACATTTCCCACAGAACAAAGGTTCCGGAGCACTGATGTGGCTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CCA 72 bp | ACTCATCAGAGTCTCCGTGCAAGAAAGGGTAAAGCGTaGGGTCACTATGGGTTTCACCCTTGGATAATTCTT | + |
Preference number: 6 (lower is better) Translates to: THQSLRARKGKA*GHYGFHPWIIL Trigger: AAGAATTATCCAAGGGTGAAACCCATAGTGACCCCACGCTTTACCCTTTCTTGCACGGAGACTCTGATGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 72 bp | TCACTTATATGGCTCTGGATGTACAGATCATGGGTCTaGGCGATGTTGCCAAGTTCACTCATCAGAGTCTCC | + |
Preference number: 6 (lower is better) Translates to: SLIWLWMYRSWV*AMLPSSLIRVS Trigger: GGAGACTCTGATGAGTGAACTTGGCAACATCGCCAAGACCCATGATCTGTACATCCAGAGCCATATAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 90 bp | AACTCTAGTGTAGACTTCTTCAGCCACATCAGTGCTCCGGAACCTTaGTTCTGTGGGAAATGTATACTTATTCAGCCACTCCAAAAGCGG | + |
Preference number: 6 (lower is better) Translates to: NSSVDFFSHISAPEP*FCGKCILIQPLQKR Trigger: CCGCTTTTGGAGTGGCTGAATAAGTATACATTTCCCACAGAACAAAGGTTCCGGAGCACTGATGTGGCTGAAGAAGTCTACACTAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 90 bp | GACACAAATCTCTCTGTCTCCTTGACTGACTCCTCGGTGGTCTCCTaGTATTCTGGAACAGTATCATTCAAATCCATGCATACTTTGCCC | + |
Preference number: 6 (lower is better) Translates to: DTNLSVSLTDSSVVS*YSGTVSFKSMHTLP Trigger: GGGCAAAGTATGCATGGATTTGAATGATACTGTTCCAGAATACAAGGAGACCACCGAGGAGTCAGTCAAGGAGACAGAGAGATTTGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 90 bp | TCACGATTTTCACTTATATGGCTCTGGATGTACAGATCATGGGTCTaGGCGATGTTGCCAAGTTCACTCATCAGAGTCTCCGTGCAAGAA | + |
Preference number: 6 (lower is better) Translates to: SRFSLIWLWMYRSWV*AMLPSSLIRVSVQE Trigger: TTCTTGCACGGAGACTCTGATGAGTGAACTTGGCAACATCGCCAAGACCCATGATCTGTACATCCAGAGCCATATAAGTGAAAATCGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS TCA 72 bp | TTTGCAGCATTTCTGACACAAATCTCTCTGTCTCCTTaGCTGACTCCTCGGTGGTCTCCTTGTATTCTGGAA | + |
Preference number: 6 (lower is better) Translates to: FAAFLTQISLSP*LTPRWSPCILE Trigger: TTCCAGAATACAAGGAGACCACCGAGGAGTCAGTCAAGGAGACAGAGAGATTTGTGTCAGAAATGCTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 72 bp | GATGCTCTGGGGTTGATCAAGAGGGCATCAAATTCCTaGCCAACTTCAAAGTTTCCAATCTCGCTATCAAGC | + |
Preference number: 6 (lower is better) Translates to: DALGLIKRASNS*PTSKFPISLSS Trigger: GCTTGATAGCGAGATTGGAAACTTTGAAGTTGGCAAGGAATTTGATGCCCTCTTGATCAACCCCAGAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 90 bp | CCCAGGGCTTGGCTTCCTCCAAGAGTGGCTAGTCTGAAGACTTCTTaGAGGGTGAGGTTTTTCTCATTTACCTTATTAATTAAGAGGACA | + |
Preference number: 6 (lower is better) Translates to: PRAWLPPRVASLKTS*RVRFFSFTLLIKRT Trigger: TGTCCTCTTAATTAATAAGGTAAATGAGAAAAACCTCACCCTCAAAGAAGTCTTCAGACTAGCCACTCTTGGAGGAAGCCAAGCCCTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS TCA 72 bp | AAAACAGATCAATGGGAGAGTCTGATGCTCTGGGGTTaGTCAAGAGGGCATCAAATTCCTTGCCAACTTCAA | + |
Preference number: 6 (lower is better) Translates to: KTDQWESLMLWG*SRGHQIPCQLQ Trigger: TTGAAGTTGGCAAGGAATTTGATGCCCTCTTGATCAACCCCAGAGCATCAGACTCTCCCATTGATCTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CCA 72 bp | CGATTTTCACTTATATGGCTCTGGATGTACAGATCATaGGTCTTGGCGATGTTGCCAAGTTCACTCATCAGA | + |
Preference number: 6 (lower is better) Translates to: RFSLIWLWMYRS*VLAMLPSSLIR Trigger: TCTGATGAGTGAACTTGGCAACATCGCCAAGACCCATGATCTGTACATCCAGAGCCATATAAGTGAAAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS TCA 72 bp | CCCAAATTTATCTGTAATTTCCGCAAGGATCAGGGATaGGTCAGTGTGAATTGTTCCAAAGTAGCAAGCCGT | + |
Preference number: 6 (lower is better) Translates to: PKFICNFRKDQG*VSVNCSKVASR Trigger: ACGGCTTGCTACTTTGGAACAATTCACACTGACTCATCCCTGATCCTTGCGGAAATTACAGATAAATTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS GCA 72 bp | TTCAAATCCATGCATACTTTGCCCACAAATGCTCGCTaGCCAAATTTATCTGTAATTTCCGCAAGGATCAGG | + |
Preference number: 6 (lower is better) Translates to: FKSMHTLPTNAR*PNLSVISARIR Trigger: CCTGATCCTTGCGGAAATTACAGATAAATTTGGGCAGCGAGCATTTGTGGGCAAAGTATGCATGGATTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS GCA 72 bp | TCTCCTTGTATTCTGGAACAGTATCATTCAAATCCATaGATACTTTGCCCACAAATGCTCGCTGCCCAAATT | + |
Preference number: 6 (lower is better) Translates to: SPCILEQYHSNP*ILCPQMLAAQI Trigger: AATTTGGGCAGCGAGCATTTGTGGGCAAAGTATGCATGGATTTGAATGATACTGTTCCAGAATACAAGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 90 bp | GTCTCCTTGTATTCTGGAACAGTATCATTCAAATCCATGCATACTTaGCCCACAAATGCTCGCTGCCCAAATTTATCTGTAATTTCCGCA | + |
Preference number: 6 (lower is better) Translates to: VSLYSGTVSFKSMHT*PTNARCPNLSVISA Trigger: TGCGGAAATTACAGATAAATTTGGGCAGCGAGCATTTGTGGGCAAAGTATGCATGGATTTGAATGATACTGTTCCAGAATACAAGGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 72 bp | TGGCTTCCTCCAAGAGTGGCTAGTCTGAAGACTTCTTaGAGGGTGAGGTTTTTCTCATTTACCTTATTAATT | + |
Preference number: 6 (lower is better) Translates to: WLPPRVASLKTS*RVRFFSFTLLI Trigger: AATTAATAAGGTAAATGAGAAAAACCTCACCCTCAAAGAAGTCTTCAGACTAGCCACTCTTGGAGGAAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |
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CDS CAA 72 bp | TATTCTGGAACAGTATCATTCAAATCCATGCATACTTaGCCCACAAATGCTCGCTGCCCAAATTTATCTGTA | + |
Preference number: 6 (lower is better) Translates to: YSGTVSFKSMHT*PTNARCPNLSV Trigger: TACAGATAAATTTGGGCAGCGAGCATTTGTGGGCAAAGTATGCATGGATTTGAATGATACTGTTCCAGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087600.10 ENSMUST00000121725.8 ENSMUST00000237823.2 |