Pregenerated sensors for GCNT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091387Ensembl transcript IDs: ENSMUST00000171324.3
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTCTCCAGCACTGGCTGTCCCCATCCACCCACGCCCGCCCCTCTaGCTTCTCAGAGAACCATACCCTACAAGCATCACACCACAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: SSPALAVPIHPRPPL*LLREPYPTSITPQH Trigger: GTGCTGTGGTGTGATGCTTGTAGGGTATGGTTCTCTGAGAAGGCAGAGGGGCGGGCGTGGGTGGATGGGGACAGCCAGTGCTGGAGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 90 bp | GGTTGTGGCTCAGCAGCACAATACACAATACGTTCAGTCTCAAGGTaGCTCTGCCCCTCCCCCATCCGTGTGCATGTGTGTGTATGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: GCGSAAQYTIRSVSR*LCPSPIRVHVCVCV Trigger: CACACATACACACACATGCACACGGATGGGGGAGGGGCAGAGGCACCTTGAGACTGAACGTATTGTGTATTGTGCTGCTGAGCCACAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 90 bp | CAATACGTTCAGTCTCAAGGTGCCTCTGCCCCTCCCCCATCCGTGTaGATGTGTGTGTATGTGTGCATGTGTGCATGTGTATGTGTGTGC | + |
|
Preference number: 1 (lower is better) Translates to: QYVQSQGASAPPPSV*MCVYVCMCACVCVC Trigger: GCACACACATACACATGCACACATGCACACATACACACACATGCACACGGATGGGGGAGGGGCAGAGGCACCTTGAGACTGAACGTATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 90 bp | GTACATTTGTGTGTGTGTGTGTGTGTACACACTGATGGGTGTAGGTaGCACTGGAGGCCAGAAGGTGGCACTGGTTTCCCTACAACTGGA | + |
|
Preference number: 1 (lower is better) Translates to: VHLCVCVCVHTDGCR*HWRPEGGTGFPTTG Trigger: TCCAGTTGTAGGGAAACCAGTGCCACCTTCTGGCCTCCAGTGGCACCTACACCCATCAGTGTGTACACACACACACACACACAAATGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR TCA 90 bp | ATTTGGGGAGGGCTCATAGCAAACGGTTTTTGCCAGAATCAATTCTaGAGACCCTGCAGGATTCCCAAGGCAAGAGCCAGTGCTTTGGCG | + |
|
Preference number: 1 (lower is better) Translates to: IWGGLIANGFCQNQF*RPCRIPKARASALA Trigger: CGCCAAAGCACTGGCTCTTGCCTTGGGAATCCTGCAGGGTCTTCAGAATTGATTCTGGCAAAAACCGTTTGCTATGAGCCCTCCCCAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 90 bp | GAGAACAGGGGCCTTTCTCTGCAGAAAGACAGGGGACAAGGTAGATaGTTGCTGCATGTTGCCCTTACATTCTCCTTGATGACCGAAGTC | + |
|
Preference number: 1 (lower is better) Translates to: ENRGLSLQKDRGQGR*LLHVALTFSLMTEV Trigger: GACTTCGGTCATCAAGGAGAATGTAAGGGCAACATGCAGCAAGCATCTACCTTGTCCCCTGTCTTTCTGCAGAGAAAGGCCCCTGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 90 bp | GAAATACAAGCGGTTGACGTTTCTGAGTCCAGAGAAATGTGTCCATaGGGGAAGGAAGGCATGCCACTTGGTCTGCCCATCATCCACTTG | + |
|
Preference number: 1 (lower is better) Translates to: EIQAVDVSESREMCP*GKEGMPLGLPIIHL Trigger: CAAGTGGATGATGGGCAGACCAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCTCTGGACTCAGAAACGTCAACCGCTTGTATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 90 bp | GAATCAATTCTGAAGACCCTGCAGGATTCCCAAGGCAAGAGCCAGTaGTTTGGCGAGCTCTCTGAAATACAAGCGGTTGACGTTTCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: ESILKTLQDSQGKSQ*FGELSEIQAVDVSE Trigger: CTCAGAAACGTCAACCGCTTGTATTTCAGAGAGCTCGCCAAAGCACTGGCTCTTGCCTTGGGAATCCTGCAGGGTCTTCAGAATTGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR TCA 90 bp | CACAAGGAATTTTTACATGTGTCCTACCCTCCACAGAGACTGGTGTaGTGTTGCAGCCTGTTCTCAGGGTTGTGGCTCAGCAGCACAATA | + |
|
Preference number: 1 (lower is better) Translates to: HKEFLHVSYPPQRLV*CCSLFSGLWLSSTI Trigger: TATTGTGCTGCTGAGCCACAACCCTGAGAACAGGCTGCAACATCACACCAGTCTCTGTGGAGGGTAGGACACATGTAAAAATTCCTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 90 bp | GCCACTTGGTCTGCCCATCATCCACTTGAAAATAGCAGGGCAGCATaGAGCAATTTGAGACAATTCCTAATACCAGAGAACAGGGGCCTT | + |
|
Preference number: 1 (lower is better) Translates to: ATWSAHHPLENSRAA*SNLRQFLIPENRGL Trigger: AAGGCCCCTGTTCTCTGGTATTAGGAATTGTCTCAAATTGCTGCATGCTGCCCTGCTATTTTCAAGTGGATGATGGGCAGACCAAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 90 bp | CAAAACACAAGGAATTTTTACATGTGTCCTACCCTCCACAGAGACTaGTGTGATGTTGCAGCCTGTTCTCAGGGTTGTGGCTCAGCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: QNTRNFYMCPTLHRD*CDVAACSQGCGSAA Trigger: TGCTGCTGAGCCACAACCCTGAGAACAGGCTGCAACATCACACCAGTCTCTGTGGAGGGTAGGACACATGTAAAAATTCCTTGTGTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 90 bp | GGACCAGAACTTGGGTCTTCTGCAGGAGCAGCACATTTTCTTAACTaGCGAGCCACCCTCTATACTTCATCATCTAAGGATAGAAAGTTG | + |
|
Preference number: 1 (lower is better) Translates to: GPELGSSAGAAHFLN*RATLYTSSSKDRKL Trigger: CAACTTTCTATCCTTAGATGATGAAGTATAGAGGGTGGCTCGGCAGTTAAGAAAATGTGCTGCTCCTGCAGAAGACCCAAGTTCTGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR TCA 90 bp | ATAAATACTATACAGAGAACAATTATCAAACAGTGTTGTACATTCTaGGATTTGGGGAGGGCTCATAGCAAACGGTTTTTGCCAGAATCA | + |
|
Preference number: 1 (lower is better) Translates to: INTIQRTIIKQCCTF*DLGRAHSKRFLPES Trigger: TGATTCTGGCAAAAACCGTTTGCTATGAGCCCTCCCCAAATCTCAGAATGTACAACACTGTTTGATAATTGTTCTCTGTATAGTATTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR GCA 90 bp | TACAGGCAGCTGGGAGCCACCTGGTGTGAGTGCTGGGACCAGAACTTGGGTCTTCGTTCAGTCTCAAGGTaGCTCTGCCCCTCCCCCATC | + |
|
Preference number: 2 (lower is better) Translates to: YRQLGATWCECWDQNLGLRSVSR*LCPSPI Trigger: GATGGGGGAGGGGCAGAGGCACCTTGAGACTGAACG...AAGACCCAAGTTCTGGTCCCAGCACTCACACCAGGTGGCTCCCAGCTGCCTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGGGCCTTTCTCTGCAGAAAGACAGGGGACAAGGTAGATGCTTGCTGCATGCCACGCCCGCCCCTCTaGCTTCTCAGAGAACCATAC | + |
|
Preference number: 2 (lower is better) Translates to: TGAFLCRKTGDKVDACCMPRPPL*LLREPY Trigger: GTATGGTTCTCTGAGAAGGCAGAGGGGCGGGCGTGG...CATGCAGCAAGCATCTACCTTGTCCCCTGTCTTTCTGCAGAGAAAGGCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTCTCAGCCCTGAATCTGGTGGCAGAGCTTCCCCTGCAACTCTGGCCTCTTGCTGGGACCAGAACTTaGGTCTTCTGCAGGAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FFSALNLVAELPLQLWPLAGTRT*VFCRSS Trigger: GCTGCTCCTGCAGAAGACCCAAGTTCTGGTCCCAGC...AAGAGGCCAGAGTTGCAGGGGAAGCTCTGCCACCAGATTCAGGGCTGAGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTGGTCTGCCCATCATCCACTGGAGGCCAGAAGGTaGCACTGGTTTCCCTACAAC | + |
|
Preference number: 2 (lower is better) Translates to: RNVSMGEGRHATWSAHHPLEARR*HWFPYN Trigger: GTTGTAGGGAAACCAGTGCCACCTTCTGGCCTCCAG...TGGATGATGGGCAGACCAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGGGCCTTTCTCTGCAGAAAGACAGGGGACAAGGTAGATGCTTGCTGCATGGTGCAGGTGTGCGTGTaGAAGCCTGTATGTGTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: TGAFLCRKTGDKVDACCMVQVCV*KPVCVS Trigger: ACTCACACATACAGGCTTGCACACGCACACCTGCAC...CATGCAGCAAGCATCTACCTTGTCCCCTGTCTTTCTGCAGAGAAAGGCCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CCA 90 bp | ACGTTTCTGAGTCCAGAGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTGAGAGAAGGGGAGGGCTaGCTTCACACTCCCACACTT | + |
|
Preference number: 2 (lower is better) Translates to: TFLSPEKCVHGGRKACHLREGEG*LHTPTL Trigger: AAGTGTGGGAGTGTGAAGCCAGCCCTCCCCTTCTCT...CAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCTCTGGACTCAGAAACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGGGCCTTTCTCTGCAGAAAGACAGGGGACAAGGTAGATGCTTGCTGCATGACCTGGTGTGAGTGCTaGGACCAGAACTTGGGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TGAFLCRKTGDKVDACCMTWCEC*DQNLGL Trigger: AAGACCCAAGTTCTGGTCCCAGCACTCACACCAGGT...CATGCAGCAAGCATCTACCTTGTCCCCTGTCTTTCTGCAGAGAAAGGCCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR GCA 90 bp | ACGTTTCTGAGTCCAGAGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTGCGACAGCATGTTCAGTaGCTGTGCTCAGTGCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: TFLSPEKCVHGGRKACHLRQHVQ*LCSVHR Trigger: TCTGTGCACTGAGCACAGGCACTGAACATGCTGTCG...CAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCTCTGGACTCAGAAACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGGGCCTTTCTCTGCAGAAAGACAGGGGACAAGGTAGATGCTTGCTGCATGAGAAATGGAGCAAAATaGGGCCACAGGGCAGCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: TGAFLCRKTGDKVDACCMRNGAK*GHRAAS Trigger: ACTAGCTGCCCTGTGGCCCCATTTTGCTCCATTTCT...CATGCAGCAAGCATCTACCTTGTCCCCTGTCTTTCTGCAGAGAAAGGCCCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTGGTCTGCCCATCATCTTCTTTGAGCTTCTCTaGGGTAGTGGAATCCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: REMCPWGKEGMPLGLPIIFFELL*GSGIPP Trigger: AGGAGGGATTCCACTACCTCAGAGAAGCTCAAAGAA...GATGATGGGCAGACCAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTGGTCTGCCCATCATCCACAAGAGCATGGCACGTaGAGAGCACAGAAGTGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: RNVSMGEGRHATWSAHHPQEHGT*RAQKCK Trigger: TTTACACTTCTGTGCTCTGCACGTGCCATGCTCTTG...TGGATGATGGGCAGACCAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 90 bp | AACAGGGGCCTTTCTCTGCAGAAAGACAGGGGACAAGGTAGATGCTaGCTGCATGTTGCCCTTACATTCTCCTTGATGACCGAAGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: NRGLSLQKDRGQGRC*LHVALTFSLMTEVL Trigger: AAGGACTTCGGTCATCAAGGAGAATGTAAGGGCAACATGCAGCAAGCATCTACCTTGTCCCCTGTCTTTCTGCAGAGAAAGGCCCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 90 bp | TGTGCATGTTTTGCCTGCAAGTATGTCAGTCTACCATGTGTGTGTTaGTGCTTTCTGAGGCCAGAAGAGGAGGGACACCAGGTCTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: CACFACKYVSLPCVC*CFLRPEEEGHQVSS Trigger: TGAGGAGACCTGGTGTCCCTCCTCTTCTGGCCTCAGAAAGCACAAACACACACATGGTAGACTGACATACTTGCAGGCAAAACATGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGGGCCTTTCTCTGCAGAAAGACAGGGGACAAGGTAGATGCTTGCTGCATGAAATGCAAAGCTGAATaGAGCCTGTGTTCCTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: TGAFLCRKTGDKVDACCMKCKAE*SLCSSP Trigger: TGGAGAGGAACACAGGCTCCATTCAGCTTTGCATTT...CATGCAGCAAGCATCTACCTTGTCCCCTGTCTTTCTGCAGAGAAAGGCCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTCTCAGCCCTGAATCTGGTGGCAGAGCTTCCCCTGCAACTCTGGCCTCTTACTTTTCAGAGGGAATaGCTTGTACGATTAGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: FFSALNLVAELPLQLWPLTFQRE*LVRLAH Trigger: GTGTGCTAATCGTACAAGCCATTCCCTCTGAAAAGT...AAGAGGCCAGAGTTGCAGGGGAAGCTCTGCCACCAGATTCAGGGCTGAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 90 bp | TCTGCCCATCATCCACTTGAAAATAGCAGGGCAGCATGCAGCAATTaGAGACAATTCCTAATACCAGAGAACAGGGGCCTTTCTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SAHHPLENSRAACSN*RQFLIPENRGLSLQ Trigger: CTGCAGAGAAAGGCCCCTGTTCTCTGGTATTAGGAATTGTCTCAAATTGCTGCATGCTGCCCTGCTATTTTCAAGTGGATGATGGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGTCTTCTGCAGGAGCAGCACATTTTCTTAACTGCCGAGCCACCCTCTATACTTCTTTGGTGCTCAGTTaGGAAAAATGCTGCACTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GSSAGAAHFLNCRATLYTSLVLS*EKCCTN Trigger: GTTAGTGCAGCATTTTTCTCAACTGAGCACCAAAGA...AGTATAGAGGGTGGCTCGGCAGTTAAGAAAATGTGCTGCTCCTGCAGAAGACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR GCA 90 bp | GACGACAAGCAATTTCAGCACTTAAACACCAGCCAACTGTGGGCTCGAAGTCCAACTATTAAGTTCAGATaGTGTTGGGCAGGACATGGG | + |
|
Preference number: 2 (lower is better) Translates to: DDKQFQHLNTSQLWARSPTIKFR*CWAGHG Trigger: CCCATGTCCTGCCCAACAGCATCTGAACTTAATAGT...TGGACTTCGAGCCCACAGTTGGCTGGTGTTTAAGTGCTGAAATTGCTTGTCGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTGGTCTGCCCATCATCCAATCTGCATGCTACTATaGTGTTGGCTGTACAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RNVSMGEGRHATWSAHHPICMLL*CWLYKK Trigger: TTTCTTGTACAGCCAACAGCATAGTAGCATGCAGAT...TGGATGATGGGCAGACCAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 90 bp | TGTGGGCTCGAAGTCCAGGCATGGAAATCCGTAGAAGTTTCATCCTaGGAAAAACTATTAAGTTCAGATGCTGTTGGGCAGGACATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: CGLEVQAWKSVEVSS*EKLLSSDAVGQDMG Trigger: ACCCATGTCCTGCCCAACAGCATCTGAACTTAATAGTTTTTCCAAGGATGAAACTTCTACGGATTTCCATGCCTGGACTTCGAGCCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR TCA 90 bp | CAATTCCTAATACCAGAGAACAGGGGCCTTTCTCTGCAGAAAGACAGGGGACAATGGAGTTCTGGCCTGTaGCATTTTGAACTAGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QFLIPENRGLSLQKDRGQWSSGL*HFELVL Trigger: GAGAACTAGTTCAAAATGTCACAGGCCAGAACTCCA...TTGTCCCCTGTCTTTCTGCAGAGAAAGGCCCCTGTTCTCTGGTATTAGGAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGTCTTCTGCAGGAGCAGCACATTTTCTTAACTGCCGAGCCACCCTCTATACTTCTAAGAAAGCTTACTaGCTTGGCGGTTACATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GSSAGAAHFLNCRATLYTSKKAY*LGGYIE Trigger: TTCTATGTAACCGCCAAGTCAGTAAGCTTTCTTAGA...AGTATAGAGGGTGGCTCGGCAGTTAAGAAAATGTGCTGCTCCTGCAGAAGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTGGTCTGCCCATCATCCACACAGAAGTGTAAAATaGTATTTACGTACTCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: RNVSMGEGRHATWSAHHPHRSVK*YLRTPV Trigger: GACTGGAGTACGTAAATATCATTTTACACTTCTGTG...TGGATGATGGGCAGACCAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 90 bp | AACTGCCGAGCCACCCTCTATACTTCATCATCTAAGGATAGAAAGTaGGTGACAGACGTTTCCCTGGGAACAAAAGCATCCAAAGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: NCRATLYTSSSKDRK*VTDVSLGTKASKGY Trigger: ATACCCTTTGGATGCTTTTGTTCCCAGGGAAACGTCTGTCACCAACTTTCTATCCTTAGATGATGAAGTATAGAGGGTGGCTCGGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 90 bp | AAACTGATAGTTCAAATTTTGTCTCCCCTTCATGTGACATTTCCCTaGAAGCTCATGAGAGCCTCCGAGGAAACGACAGCATGTTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KLIVQILSPLHVTFP*KLMRASEETTACSV Trigger: CACTGAACATGCTGTCGTTTCCTCGGAGGCTCTCATGAGCTTCAAGGGAAATGTCACATGAAGGGGAGACAAAATTTGAACTATCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 90 bp | GGACCTGGTTATCTTGACACTGTCACCAAACTGATAGTTCAAATTTaGTCTCCCCTTCATGTGACATTTCCCTTGAAGCTCATGAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GPGYLDTVTKLIVQI*SPLHVTFPLKLMRA Trigger: GGCTCTCATGAGCTTCAAGGGAAATGTCACATGAAGGGGAGACAAAATTTGAACTATCAGTTTGGTGACAGTGTCAAGATAACCAGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR TCA 90 bp | GTACTGGCTTTTCGATATACAGTGTCTATGGTACAGTATACGATTGCTCACATAGCACTCCCTCTACCCTaGATCAGAAAAGTGAGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: VLAFRYTVSMVQYTIAHIALPLP*IRKVRH Trigger: GTGCCTCACTTTTCTGATTCAGGGTAGAGGGAGTGC...TATGTGAGCAATCGTATACTGTACCATAGACACTGTATATCGAAAAGCCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR TCA 90 bp | GTACTGGCTTTTCGATATACAGTGTCTATGGTACAGTATACGATTGCTCACATACCACAGAGACTGGTGTaGTGTTGCAGCCTGTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: VLAFRYTVSMVQYTIAHIPQRLV*CCSLFS Trigger: TGAGAACAGGCTGCAACATCACACCAGTCTCTGTGG...TATGTGAGCAATCGTATACTGTACCATAGACACTGTATATCGAAAAGCCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR TCA 90 bp | CAATTCCTAATACCAGAGAACAGGGGCCTTTCTCTGCAGAAAGACAGGGGACAAGAAAGAGGTGCAAGGTaGCTTAAAGATAAAGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: QFLIPENRGLSLQKDRGQERGAR*LKDKEM Trigger: CATTTCTTTATCTTTAAGTCACCTTGCACCTCTTTC...TTGTCCCCTGTCTTTCTGCAGAGAAAGGCCCCTGTTCTCTGGTATTAGGAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CCA 90 bp | GTACTGGCTTTTCGATATACAGTGTCTATGGTACAGTATACGATTGCTCACATAAAGTTCAGATGCTGTTaGGCAGGACATGGGTGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: VLAFRYTVSMVQYTIAHIKFRCC*AGHGCV Trigger: TACACACCCATGTCCTGCCCAACAGCATCTGAACTT...TATGTGAGCAATCGTATACTGTACCATAGACACTGTATATCGAAAAGCCAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR GCA 90 bp | GATATACAGTGTCTATGGTACAGTATACGATTGCTCACATATTTTGACAGCCTTTGTAATACATCTGTGTaGAGGTGTGCGTGTGCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: DIQCLWYSIRLLTYFDSLCNTSV*RCACAS Trigger: GCTTGCACACGCACACCTGCACACAGATGTATTACA...AAGGCTGTCAAAATATGTGAGCAATCGTATACTGTACCATAGACACTGTATATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR TCA 90 bp | GATATACAGTGTCTATGGTACAGTATACGATTGCTCACATATTTTGACAGCCTTTGGACCTGGTTATCTTaGCACTGTCACCAAACTGAT | + |
|
Preference number: 2 (lower is better) Translates to: DIQCLWYSIRLLTYFDSLWTWLS*HCHQTD Trigger: ATCAGTTTGGTGACAGTGTCAAGATAACCAGGTCCA...AAGGCTGTCAAAATATGTGAGCAATCGTATACTGTACCATAGACACTGTATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CCA 90 bp | GATATACAGTGTCTATGGTACAGTATACGATTGCTCACATATTTTGACAGCCTTTTAAAGATAAAGAAATaGAGCAAAATGGGGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: DIQCLWYSIRLLTYFDSLLKIKK*SKMGPQ Trigger: CTGTGGCCCCATTTTGCTCCATTTCTTTATCTTTAA...AAGGCTGTCAAAATATGTGAGCAATCGTATACTGTACCATAGACACTGTATATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CCA 90 bp | ACATTCGTTTCACATGAAATACTTAAGCCTGTATATATTCACATTCTGGAAGCCATGCTACTATGCTGTTaGCTGTACAAGAAACTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TFVSHEILKPVYIHILEAMLLCC*LYKKLQ Trigger: TTGGAGTTTCTTGTACAGCCAACAGCATAGTAGCAT...GGCTTCCAGAATGTGAATATATACAGGCTTAAGTATTTCATGTGAAACGAATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR TCA 90 bp | ACATTCGTTTCACATGAAATACTTAAGCCTGTATATATTCACATTCTGGAAGCCTGGCCTGTGACATTTTaGACTAGTTCTCAGTTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: TFVSHEILKPVYIHILEAWPVTF*TSSQFY Trigger: ATAAAACTGAGAACTAGTTCAAAATGTCACAGGCCA...GGCTTCCAGAATGTGAATATATACAGGCTTAAGTATTTCATGTGAAACGAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 72 bp | GAGCCTCCGAGGAAACGACAGCATGTTCAGTGCCTGTaGTCAGTGCACAGAGAGCAGAGCCCATGGAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: EPPRKRQHVQCL*SVHREQSPWRP Trigger: CGGCCTCCATGGGCTCTGCTCTCTGTGCACTGAGCACAGGCACTGAACATGCTGTCGTTTCCTCGGAGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 72 bp | TGGAGTTACAGGCAGCTGGGAGCCACCTGGTGTGAGTaGTGGGACCAGAACTTGGGTCTTCTGCAGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: WSYRQLGATWCE*WDQNLGLLQEQ Trigger: CTGCTCCTGCAGAAGACCCAAGTTCTGGTCCCAGCACTCACACCAGGTGGCTCCCAGCTGCCTGTAACTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 72 bp | AGTTACAGGCAGCTGGGAGCCACCTGGTGTGAGTGCTaGGACCAGAACTTGGGTCTTCTGCAGGAGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SYRQLGATWCEC*DQNLGLLQEQH Trigger: GTGCTGCTCCTGCAGAAGACCCAAGTTCTGGTCCCAGCACTCACACCAGGTGGCTCCCAGCTGCCTGTAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR TCA 72 bp | CAACTGGAGTTACAGGCAGCTGGGAGCCACCTGGTGTaGGTGCTGGGACCAGAACTTGGGTCTTCTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QLELQAAGSHLV*VLGPELGSSAG Trigger: TCCTGCAGAAGACCCAAGTTCTGGTCCCAGCACTCACACCAGGTGGCTCCCAGCTGCCTGTAACTCCAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 72 bp | CCCTACAACTGGAGTTACAGGCAGCTGGGAGCCACCTaGTGTGAGTGCTGGGACCAGAACTTGGGTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PYNWSYRQLGAT*CECWDQNLGLL Trigger: CAGAAGACCCAAGTTCTGGTCCCAGCACTCACACCAGGTGGCTCCCAGCTGCCTGTAACTCCAGTTGTAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 72 bp | GGCACTGGTTTCCCTACAACTGGAGTTACAGGCAGCTaGGAGCCACCTGGTGTGAGTGCTGGGACCAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GTGFPTTGVTGS*EPPGVSAGTRT Trigger: AGTTCTGGTCCCAGCACTCACACCAGGTGGCTCCCAGCTGCCTGTAACTCCAGTTGTAGGGAAACCAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTACACACTGATGGGTGTAGGTaGCACTGGAGGCCAGAAGGTGGCACTGGTTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVHTDGCR*HWRPEGGTGFP Trigger: AGGGAAACCAGTGCCACCTTCTGGCCTCCAGTGGCACCTACACCCATCAGTGTGTACACACACACACACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 72 bp | GCGGTTGACGTTTCTGAGTCCAGAGAAATGTGTCCATaGGGGAAGGAAGGCATGCCACTTGGTCTGCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: AVDVSESREMCP*GKEGMPLGLPI Trigger: GATGGGCAGACCAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCTCTGGACTCAGAAACGTCAACCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 72 bp | TCAGCAGCACAATACACAATACGTTCAGTCTCAAGGTaGCTCTGCCCCTCCCCCATCCGTGTGCATGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SAAQYTIRSVSR*LCPSPIRVHVC Trigger: ACACACATGCACACGGATGGGGGAGGGGCAGAGGCACCTTGAGACTGAACGTATTGTGTATTGTGCTGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 72 bp | CTGAAGACCCTGCAGGATTCCCAAGGCAAGAGCCAGTaGTTTGGCGAGCTCTCTGAAATACAAGCGGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LKTLQDSQGKSQ*FGELSEIQAVD Trigger: GTCAACCGCTTGTATTTCAGAGAGCTCGCCAAAGCACTGGCTCTTGCCTTGGGAATCCTGCAGGGTCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 72 bp | GCCCCTCCCCCATCCGTGTGCATGTGTGTGTATGTGTaGATGTGTGCATGTGTATGTGTGTGCATGTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: APPPSVCMCVYV*MCACVCVCMCM Trigger: CATACACATGCACACACATACACATGCACACATGCACACATACACACACATGCACACGGATGGGGGAGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 72 bp | GCACAATACACAATACGTTCAGTCTCAAGGTGCCTCTaGCCCTCCCCCATCCGTGTGCATGTGTGTGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: AQYTIRSVSRCL*PSPIRVHVCVC Trigger: ACATACACACACATGCACACGGATGGGGGAGGGGCAGAGGCACCTTGAGACTGAACGTATTGTGTATTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 72 bp | GGGCTGGCTTCACACTCCCACACTTTTCAGAGGGAATaGCTTGTACGATTAGCACACACCCCAAAGTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GLASHSHTFQRE*LVRLAHTPKLA Trigger: AGCCAACTTTGGGGTGTGTGCTAATCGTACAAGCCATTCCCTCTGAAAAGTGTGGGAGTGTGAAGCCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 72 bp | AAGGTCTCAGTTGCTAAAGTGAGAGAAGGGGAGGGCTaGCTTCACACTCCCACACTTTTCAGAGGGAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: KVSVAKVREGEG*LHTPTLFRGNG Trigger: GCCATTCCCTCTGAAAAGTGTGGGAGTGTGAAGCCAGCCCTCCCCTTCTCTCACTTTAGCAACTGAGACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR TCA 72 bp | TTTTTACATGTGTCCTACCCTCCACAGAGACTGGTGTaGTGTTGCAGCCTGTTCTCAGGGTTGTGGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FLHVSYPPQRLV*CCSLFSGLWLS Trigger: GCTGAGCCACAACCCTGAGAACAGGCTGCAACATCACACCAGTCTCTGTGGAGGGTAGGACACATGTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 72 bp | AGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTaGTCTGCCCATCATCCACTTGAAAATAGCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RNVSMGEGRHAT*SAHHPLENSRA Trigger: TGCCCTGCTATTTTCAAGTGGATGATGGGCAGACCAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR TCA 72 bp | GGCAAGCAGGCGATCGGACCATTCTTTGAGCTTCTCTaGGGTAGTGGAATCCCTCCTCCTAATATTCTAACG | + |
|
Preference number: 3 (lower is better) Translates to: GKQAIGPFFELL*GSGIPPPNILT Trigger: CGTTAGAATATTAGGAGGAGGGATTCCACTACCTCAGAGAAGCTCAAAGAATGGTCCGATCGCCTGCTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 72 bp | GGCCTTTCTCTGCAGAAAGACAGGGGACAAGGTAGATaGTTGCTGCATGTTGCCCTTACATTCTCCTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: GLSLQKDRGQGR*LLHVALTFSLM Trigger: CATCAAGGAGAATGTAAGGGCAACATGCAGCAAGCATCTACCTTGTCCCCTGTCTTTCTGCAGAGAAAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CAA 90 bp | ACGTTTCTGAGTCCAGAGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTGTCTAAGGATAGAAAGTaGGTGACAGACGTTTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TFLSPEKCVHGGRKACHLSKDRK*VTDVSL Trigger: CAGGGAAACGTCTGTCACCAACTTTCTATCCTTAGA...CAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCTCTGGACTCAGAAACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTGGTCTGCCCATCATCCACCGAAGTCCTTGAGTTaGATCATGCATGGTTATCAA | + |
|
Preference number: 3 (lower is better) Translates to: RNVSMGEGRHATWSAHHPPKSLS*IMHGYQ Trigger: TTGATAACCATGCATGATCAAACTCAAGGACTTCGG...TGGATGATGGGCAGACCAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 72 bp | GACAAGCAATTTCAGCACTTAAACACCAGCCAACTGTaGGCTCGAAGTCCAGGCATGGAAATCCGTAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: DKQFQHLNTSQL*ARSPGMEIRRS Trigger: ACTTCTACGGATTTCCATGCCTGGACTTCGAGCCCACAGTTGGCTGGTGTTTAAGTGCTGAAATTGCTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CAA 90 bp | GATATACAGTGTCTATGGTACAGTATACGATTGCTCACATATTTTGACAGCCTTTGCTGGGACCAGAACTaGGGTCTTCTGCAGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DIQCLWYSIRLLTYFDSLCWDQN*GLLQEQ Trigger: CTGCTCCTGCAGAAGACCCAAGTTCTGGTCCCAGCA...AAGGCTGTCAAAATATGTGAGCAATCGTATACTGTACCATAGACACTGTATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR TCA 72 bp | CCCTACAAGCATCACACCACAGCACTCCCTCTACCCTaGATCAGAAAAGTGAGGCACCAAAAGGTAAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: PYKHHTTALPLP*IRKVRHQKVNY Trigger: ATAATTTACCTTTTGGTGCCTCACTTTTCTGATTCAGGGTAGAGGGAGTGCTGTGGTGTGATGCTTGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 72 bp | TCTGCCCATCATCCACTTGAAAATAGCAGGGCAGCATaGAGCAATTTGAGACAATTCCTAATACCAGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SAHHPLENSRAA*SNLRQFLIPEN Trigger: GTTCTCTGGTATTAGGAATTGTCTCAAATTGCTGCATGCTGCCCTGCTATTTTCAAGTGGATGATGGGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR TCA 72 bp | CCCTCTATACTTCATCATCTAAGGATAGAAAGTTGGTaGCAGACGTTTCCCTGGGAACAAAAGCATCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PSILHHLRIESW*QTFPWEQKHPK Trigger: CTTTGGATGCTTTTGTTCCCAGGGAAACGTCTGTCACCAACTTTCTATCCTTAGATGATGAAGTATAGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR GCA 72 bp | GCTACGAACCATTATATACACCAAGAGCATGGCACGTaGAGAGCACAGAAGTGTAAAATGATATTTACGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ATNHYIHQEHGT*RAQKCKMIFTY Trigger: GTACGTAAATATCATTTTACACTTCTGTGCTCTGCACGTGCCATGCTCTTGGTGTATATAATGGTTCGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CAA 90 bp | GTACTGGCTTTTCGATATACAGTGTCTATGGTACAGTATACGATTGCTCACATAGCAGCATGCAGCAATTaGAGACAATTCCTAATACCA | + |
|
Preference number: 3 (lower is better) Translates to: VLAFRYTVSMVQYTIAHIAACSN*RQFLIP Trigger: TGGTATTAGGAATTGTCTCAAATTGCTGCATGCTGC...TATGTGAGCAATCGTATACTGTACCATAGACACTGTATATCGAAAAGCCAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CCA 72 bp | TTCATCCTTGGAAAAACTATTAAGTTCAGATGCTGTTaGGCAGGACATGGGTGTGTAATTCCATCTCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: FILGKTIKFRCC*AGHGCVIPSHL Trigger: TAAGTGAGATGGAATTACACACCCATGTCCTGCCCAACAGCATCTGAACTTAATAGTTTTTCCAAGGATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR TCA 72 bp | ATACAGAGAACAATTATCAAACAGTGTTGTACATTCTaGGATTTGGGGAGGGCTCATAGCAAACGGTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: IQRTIIKQCCTF*DLGRAHSKRFL Trigger: CAAAAACCGTTTGCTATGAGCCCTCCCCAAATCTCAGAATGTACAACACTGTTTGATAATTGTTCTCTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR TCA 72 bp | GCTCATTTTCAATTCTCACAATGGACCTGGTTATCTTaGCACTGTCACCAAACTGATAGTTCAAATTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AHFQFSQWTWLS*HCHQTDSSNFV Trigger: GACAAAATTTGAACTATCAGTTTGGTGACAGTGTCAAGATAACCAGGTCCATTGTGAGAATTGAAAATGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR-3UTR CAA 90 bp | GATATACAGTGTCTATGGTACAGTATACGATTGCTCACATATTTTGACAGCCTTCCAATTGTGACACCATaGTATAACAAATGCAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DIQCLWYSIRLLTYFDSLPIVTP*YNKCKA Trigger: AGCTTTGCATTTGTTATACAATGGTGTCACAATTGG...AAGGCTGTCAAAATATGTGAGCAATCGTATACTGTACCATAGACACTGTATATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR TCA 90 bp | TACAGGCAGCTGGGAGCCACCTGGTGTGAGTGCTGGGACCAGAACTTGGGTCTTACTGAACGGAAGACTTaGGGAGGTCTGATAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YRQLGATWCECWDQNLGLTERKT*GGLISS Trigger: ACTGCTTATCAGACCTCCTCAAGTCTTCCGTTCAGT...AAGACCCAAGTTCTGGTCCCAGCACTCACACCAGGTGGCTCCCAGCTGCCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | AGACCCTGCAGGATTCCCAAGGCAAGAGCCAGTGCTTaGGCGAGCTCTCTGAAATACAAGCGGTTGACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPCRIPKARASA*ASSLKYKRLTF Trigger: AAACGTCAACCGCTTGTATTTCAGAGAGCTCGCCAAAGCACTGGCTCTTGCCTTGGGAATCCTGCAGGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR GCA 90 bp | GGGTCTTCTGCAGGAGCAGCACATTTTCTTAACTGCCGAGCCACCCTCTATACTGAGGGAAGAGGAGCCTaGCCACATTTAGGAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSAGAAHFLNCRATLYTEGRGA*PHLGAS Trigger: TGAAGCTCCTAAATGTGGGCAGGCTCCTCTTCCCTC...AGTATAGAGGGTGGCTCGGCAGTTAAGAAAATGTGCTGCTCCTGCAGAAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR TCA 90 bp | GGGTCTTCTGCAGGAGCAGCACATTTTCTTAACTGCCGAGCCACCCTCTATACTGGGTTAAGAGGAGGATaGAGAGTTTCTGCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSAGAAHFLNCRATLYTGLRGG*RVSAGE Trigger: CTCTCCAGCAGAAACTCTTCATCCTCCTCTTAACCC...AGTATAGAGGGTGGCTCGGCAGTTAAGAAAATGTGCTGCTCCTGCAGAAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR TCA 90 bp | GGGTCTTCTGCAGGAGCAGCACATTTTCTTAACTGCCGAGCCACCCTCTATACTATGACGTACTTCCACTaGACGGAAGACTTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSAGAAHFLNCRATLYTMTYFH*TEDLRR Trigger: CCTCCTCAAGTCTTCCGTTCAGTGGAAGTACGTCAT...AGTATAGAGGGTGGCTCGGCAGTTAAGAAAATGTGCTGCTCCTGCAGAAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | GCCAGTGCTTTGGCGAGCTCTCTGAAATACAAGCGGTaGACGTTTCTGAGTCCAGAGAAATGTGTCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASALASSLKYKR*TFLSPEKCVHG Trigger: CCCATGGACACATTTCTCTGGACTCAGAAACGTCAACCGCTTGTATTTCAGAGAGCTCGCCAAAGCACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR TCA 90 bp | GGGTCTTCTGCAGGAGCAGCACATTTTCTTAACTGCCGAGCCACCCTCTATACTCGTAGTAAAACCATTTaGCCAGGCGGGTCTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSAGAAHFLNCRATLYTRSKTI*PGGSYS Trigger: AGAGTAAGACCCGCCTGGTCAAATGGTTTTACTACG...AGTATAGAGGGTGGCTCGGCAGTTAAGAAAATGTGCTGCTCCTGCAGAAGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAGATGCTGTTGGGCAGGACATGGGTGTGTAATTCCATCTCACTTAACTAACGTTGTCCCTGGCTaGATCCCCAGACTCGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KFRCCWAGHGCVIPSHLTNVVPG*IPRLGE Trigger: TTCCCCGAGTCTGGGGATGCAGCCAGGGACAACGTT...AGTTAAGTGAGATGGAATTACACACCCATGTCCTGCCCAACAGCATCTGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | TTTGCCTGCAAGTATGTCAGTCTACCATGTGTGTGTTaGTGCTTTCTGAGGCCAGAAGAGGAGGGACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FACKYVSLPCVC*CFLRPEEEGHQ Trigger: CTGGTGTCCCTCCTCTTCTGGCCTCAGAAAGCACAAACACACACATGGTAGACTGACATACTTGCAGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTCAGCCCTGAATCTGGTGGCAGAGCTTCCCCTGCAACTCTGGCCTCTTCTAATTTGGAAGCGATaGAGATATTGGGGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FFSALNLVAELPLQLWPLLIWKR*RYWGST Trigger: AGTGCTTCCCCAATATCTTCATCGCTTCCAAATTAG...AAGAGGCCAGAGTTGCAGGGGAAGCTCTGCCACCAGATTCAGGGCTGAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | CTTTCTCTGCAGAAAGACAGGGGACAAGGTAGATGCTaGCTGCATGTTGCCCTTACATTCTCCTTGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSLQKDRGQGRC*LHVALTFSLMT Trigger: GGTCATCAAGGAGAATGTAAGGGCAACATGCAGCAAGCATCTACCTTGTCCCCTGTCTTTCTGCAGAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTCAGCAGCACAATACACAATACGTTCAGTCTCAAGGTGCCTCTGCCCCTCTGTCATGAACTTCTCTaGAGACAAAGCAATCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: WLSSTIHNTFSLKVPLPLCHELL*RQSNQL Trigger: AAGTTGATTGCTTTGTCTTCAGAGAAGTTCATGACA...GAGGGGCAGAGGCACCTTGAGACTGAACGTATTGTGTATTGTGCTGCTGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR GCA 90 bp | CATTGCAACTTAGACTTAACTCCTGGGTGTCTTTCTATAAAGTGCCTGGTGCGCTTTAGGGGAAAGTCTTaGCCACAGAGGTTGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: HCNLDLTPGCLSIKCLVRFRGKS*PQRLMT Trigger: CGTCATCAACCTCTGTGGGCAAGACTTTCCCCTAAA...GCGCACCAGGCACTTTATAGAAAGACACCCAGGAGTTAAGTCTAAGTTGCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR CCA 90 bp | GGGTCTTCTGCAGGAGCAGCACATTTTCTTAACTGCCGAGCCACCCTCTATACTAACATATTCCTTCCTTaGAGACTTTTCAGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSAGAAHFLNCRATLYTNIFLP*RLFSSV Trigger: GACAGAGCTGAAAAGTCTCCAAGGAAGGAATATGTT...AGTATAGAGGGTGGCTCGGCAGTTAAGAAAATGTGCTGCTCCTGCAGAAGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR CCA 90 bp | AAGTTCAGATGCTGTTGGGCAGGACATGGGTGTGTAATTCCATCTCACTTAACTGTATCCGGATTAAGGTaGCCCAAAAGTGCTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KFRCCWAGHGCVIPSHLTVSGLR*PKSARQ Trigger: CTGACGAGCACTTTTGGGCCACCTTAATCCGGATAC...AGTTAAGTGAGATGGAATTACACACCCATGTCCTGCCCAACAGCATCTGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | AATTATACTTTGGCAAGCAGGCGATCGGACCATTCTTaGAGCTTCTCTGAGGTAGTGGAATCCCTCCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NYTLASRRSDHS*SFSEVVESLLL Trigger: TAGGAGGAGGGATTCCACTACCTCAGAGAAGCTCAAAGAATGGTCCGATCGCCTGCTTGCCAAAGTATAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | GTTCAAATTTTGTCTCCCCTTCATGTGACATTTCCCTaGAAGCTCATGAGAGCCTCCGAGGAAACGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQILSPLHVTFP*KLMRASEETTA Trigger: TGCTGTCGTTTCCTCGGAGGCTCTCATGAGCTTCAAGGGAAATGTCACATGAAGGGGAGACAAAATTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | ATCTGGTGGCAGAGCTTCCCCTGCAACTCTGGCCTCTaGTGGTTTAAAGGCTCATTTTCAATTCTCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: IWWQSFPCNSGL*WFKGSFSILTM Trigger: CATTGTGAGAATTGAAAATGAGCCTTTAAACCACAAGAGGCCAGAGTTGCAGGGGAAGCTCTGCCACCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR CCA 90 bp | TGCATGTTTTGCCTGCAAGTATGTCAGTCTACCATGTGTGTGTTTGTGCTTTCTCGTCCTGAGATGAACTaGAAATTCCCCCGGGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: CMFCLQVCQSTMCVFVLSRPEMN*KFPRVF Trigger: GAATACCCGGGGGAATTTCCAGTTCATCTCAGGACG...AGAAAGCACAAACACACACATGGTAGACTGACATACTTGCAGGCAAAACATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | GCCACCCTCTATACTTCATCATCTAAGGATAGAAAGTaGGTGACAGACGTTTCCCTGGGAACAAAAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ATLYTSSSKDRK*VTDVSLGTKAS Trigger: GGATGCTTTTGTTCCCAGGGAAACGTCTGTCACCAACTTTCTATCCTTAGATGATGAAGTATAGAGGGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | CATCCACTTGAAAATAGCAGGGCAGCATGCAGCAATTaGAGACAATTCCTAATACCAGAGAACAGGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPLENSRAACSN*RQFLIPENRGL Trigger: AAGGCCCCTGTTCTCTGGTATTAGGAATTGTCTCAAATTGCTGCATGCTGCCCTGCTATTTTCAAGTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR GCA 90 bp | CATTGCAACTTAGACTTAACTCCTGGGTGTCTTTCTATAAAGTGCCTGGTGCGCTCAGGTCATAATGGATaGAGTAAAGGTTGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HCNLDLTPGCLSIKCLVRSGHNG*SKGCAG Trigger: ACCAGCACAACCTTTACTGCATCCATTATGACCTGA...GCGCACCAGGCACTTTATAGAAAGACACCCAGGAGTTAAGTCTAAGTTGCAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR GCA 90 bp | GGGTCTTCTGCAGGAGCAGCACATTTTCTTAACTGCCGAGCCACCCTCTATACTCTCTTCAAGTTTTTCTaGCAGACATTTCATCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSAGAAHFLNCRATLYTLFKFF*QTFHQD Trigger: ATCTTGATGAAATGTCTGGCAGAAAAACTTGAAGAG...AGTATAGAGGGTGGCTCGGCAGTTAAGAAAATGTGCTGCTCCTGCAGAAGACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR GCA 90 bp | CAATTCCTAATACCAGAGAACAGGGGCCTTTCTCTGCAGAAAGACAGGGGACAAAGGATGAAGAGTTTCTaGTGGAGAGTGTATTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFLIPENRGLSLQKDRGQRMKSF*WRVYLK Trigger: CTTTAAATACACTCTCCAGCAGAAACTCTTCATCCT...TTGTCCCCTGTCTTTCTGCAGAGAAAGGCCCCTGTTCTCTGGTATTAGGAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR GCA 90 bp | GTACTGGCTTTTCGATATACAGTGTCTATGGTACAGTATACGATTGCTCACATAGAAGGTGAGAGCCAGTaGAATTGGGGTAGAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLAFRYTVSMVQYTIAHIEGESQ*NWGRES Trigger: GCTTTCTCTACCCCAATTGCACTGGCTCTCACCTTC...TATGTGAGCAATCGTATACTGTACCATAGACACTGTATATCGAAAAGCCAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR CCA 90 bp | GACGACAAGCAATTTCAGCACTTAAACACCAGCCAACTGTGGGCTCGAAGTCCAATGAAGAGTTTCTGCTaGAGAGTGTATTTAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DDKQFQHLNTSQLWARSPMKSFC*RVYLKQ Trigger: TTGCTTTAAATACACTCTCCAGCAGAAACTCTTCAT...TGGACTTCGAGCCCACAGTTGGCTGGTGTTTAAGTGCTGAAATTGCTTGTCGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR GCA 90 bp | GCCCATCATCCACTTGAAAATAGCAGGGCAGCATGCAGCAATTTGAGACAATTCAAACAAAATAGGCACTaGCCACAAATACCTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: AHHPLENSRAACSNLRQFKQNRH*PQIPEC Trigger: ACATTCAGGTATTTGTGGGCAGTGCCTATTTTGTTT...GAATTGTCTCAAATTGCTGCATGCTGCCCTGCTATTTTCAAGTGGATGATGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR TCA 90 bp | ACATTCGTTTCACATGAAATACTTAAGCCTGTATATATTCACATTCTGGAAGCCGGGTTCCCTCTGTCATaGACTTCTCTGAAGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFVSHEILKPVYIHILEAGFPLS*TSLKTK Trigger: CTTTGTCTTCAGAGAAGTTCATGACAGAGGGAACCC...GGCTTCCAGAATGTGAATATATACAGGCTTAAGTATTTCATGTGAAACGAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | AGACGTTTCCCTGGGAACAAAAGCATCCAAAGGGTATaGAAAGAGGTGCAAGGTGACTTAAAGATAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRFPGNKSIQRV*KEVQGDLKIKK Trigger: TTTCTTTATCTTTAAGTCACCTTGCACCTCTTTCAATACCCTTTGGATGCTTTTGTTCCCAGGGAAACGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | TATCTTGACACTGTCACCAAACTGATAGTTCAAATTTaGTCTCCCCTTCATGTGACATTTCCCTTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLDTVTKLIVQI*SPLHVTFPLKL Trigger: GAGCTTCAAGGGAAATGTCACATGAAGGGGAGACAAAATTTGAACTATCAGTTTGGTGACAGTGTCAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| 3UTR CAA 72 bp | ACAAGTGAATTAAAAAGAAAGCCAATTGTGACACCATaGTATAACAAATGCAAAGCTGAATGGAGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSELKRKPIVTP*YNKCKAEWSLC Trigger: ACACAGGCTCCATTCAGCTTTGCATTTGTTATACAATGGTGTCACAATTGGCTTTCTTTTTAATTCACTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CCA 90 bp | CCAGGCGGGTCTTACTCTGCAGGTCAGACACGTCCTGAGATGAACTaGAAATTCCCCCGGGTATTCCTGGTATCCGGATTAAGGTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGGSYSAGQTRPEMN*KFPRVFLVSGLRWP Trigger: GGGCCACCTTAATCCGGATACCAGGAATACCCGGGGGAATTTCCAGTTCATCTCAGGACGTGTCTGACCTGCAGAGTAAGACCCGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR CAA 90 bp | TACAGGCAGCTGGGAGCCACCTGGTGTGAGTGCTGGGACCAGAACTTGGGTCTTGAAGCGATGAAGATATaGGGGAAGCACTTAGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: YRQLGATWCECWDQNLGLEAMKI*GKHLAR Trigger: CCTAGCTAAGTGCTTCCCCAATATCTTCATCGCTTC...AAGACCCAAGTTCTGGTCCCAGCACTCACACCAGGTGGCTCCCAGCTGCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR CAA 90 bp | TACAGGCAGCTGGGAGCCACCTGGTGTGAGTGCTGGGACCAGAACTTGGGTCTTAAGCACTTAGCTAGGTaGTTCATGGCAGCTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: YRQLGATWCECWDQNLGLKHLAR*FMAALN Trigger: GTTCAAAGCTGCCATGAACAACCTAGCTAAGTGCTT...AAGACCCAAGTTCTGGTCCCAGCACTCACACCAGGTGGCTCCCAGCTGCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS TCA 90 bp | AACCATTTGACCAGGCGGGTCTTACTCTGCAGGTCAGACACGTCCTaGGATGAACTGGAAATTCCCCCGGGTATTCCTGGTATCCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: NHLTRRVLLCRSDTS*DELEIPPGIPGIRI Trigger: AATCCGGATACCAGGAATACCCGGGGGAATTTCCAGTTCATCTCAGGACGTGTCTGACCTGCAGAGTAAGACCCGCCTGGTCAAATGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS TCA 90 bp | AGCCAGTGCAATTGGGGTAGAGAAAGCCTTCGTAGTAAAACCATTTaGCCAGGCGGGTCTTACTCTGCAGGTCAGACACGTCCTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SQCNWGRESLRSKTI*PGGSYSAGQTRPEM Trigger: CATCTCAGGACGTGTCTGACCTGCAGAGTAAGACCCGCCTGGTCAAATGGTTTTACTACGAAGGCTTTCTCTACCCCAATTGCACTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR CAA 90 bp | AGAGAAATGTGTCCATGGGGGAAGGAAGGCATGCCACTTGGTCTGCCCATCATCCTGATTTCTAGACTCTaGCCGATTTCCAAAGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: REMCPWGKEGMPLGLPIILISRL*PISKGS Trigger: CGAGCCTTTGGAAATCGGCAAGAGTCTAGAAATCAG...GATGATGGGCAGACCAAGTGGCATGCCTTCCTTCCCCCATGGACACATTTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTCAGCAGCACAATACACAATACGTTCAGTCTCAAGGTGCCTCTGCCCCTCAGTCCTCTTCCTCCCTaGAAACCAGCTTTTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: WLSSTIHNTFSLKVPLPLSPLPP*KPAFHG Trigger: ACCATGAAAAGCTGGTTTCAAGGGAGGAAGAGGACT...GAGGGGCAGAGGCACCTTGAGACTGAACGTATTGTGTATTGTGCTGCTGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CCA 90 bp | AGGCACTGCCCACAAATACCTGAATGTTATGAGGGGGTGCCCCCTTaGAGACGTTCGTCTTTACTGGTAGCTTCATATAATCATAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RHCPQIPECYEGVPP*RRSSLLVASYNHKA Trigger: TGCCTTATGATTATATGAAGCTACCAGTAAAGACGAACGTCTCCAAGGGGGCACCCCCTCATAACATTCAGGTATTTGTGGGCAGTGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS TCA 90 bp | AGGAGGTCTGATAAGCAGTTCCAATCGGCCTGGAGCCTGGATATGTaGGCATACTCCACAGTCTCTAATTTGGAAGCGATGAAGATATTG | + |
|
Preference number: 5 (lower is better) Translates to: RRSDKQFQSAWSLDM*AYSTVSNLEAMKIL Trigger: CAATATCTTCATCGCTTCCAAATTAGAGACTGTGGAGTATGCTCACATATCCAGGCTCCAGGCCGATTGGAACTGCTTATCAGACCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS GCA 90 bp | GGGAGTATTCAACTAAGTAAATGTCTCTTTGAGGGAAGAGGAGCCTaGCCACATTTAGGAGCTTCAACAAGGAGAACAGCCACAGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GSIQLSKCLFEGRGA*PHLGASTRRTATGL Trigger: TAACCCTGTGGCTGTTCTCCTTGTTGAAGCTCCTAAATGTGGGCAGGCTCCTCTTCCCTCAAAGAGACATTTACTTAGTTGAATACTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS TCA 72 bp | ACCAGGCGGGTCTTACTCTGCAGGTCAGACACGTCCTaGGATGAACTGGAAATTCCCCCGGGTATTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TRRVLLCRSDTS*DELEIPPGIPG Trigger: ACCAGGAATACCCGGGGGAATTTCCAGTTCATCTCAGGACGTGTCTGACCTGCAGAGTAAGACCCGCCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CAA 72 bp | GGTACTGCCTTAGGGTCTGATAAACGTCACAGTCACTaGTCATCGCCACGACATCACCGTCCTCCAAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GTALGSDKRHSH*SSPRHHRPPSR Trigger: TCGACTTGGAGGACGGTGATGTCGTGGCGATGACAAGTGACTGTGACGTTTATCAGACCCTAAGGCAGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CAA 72 bp | CCAGCGAATAGGCTATGGGGAAGTCCTCTTCCTCCCTaGAAACCAGCTTTTCATGGTACTGCCTTAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PANRLWGSPLPP*KPAFHGTALGS Trigger: AGACCCTAAGGCAGTACCATGAAAAGCTGGTTTCAAGGGAGGAAGAGGACTTCCCCATAGCCTATTCGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CAA 90 bp | TGTGGACGACCAGCGAATAGGCTATGGGGAAGTCCTCTTCCTCCCTaGAAACCAGCTTTTCATGGTACTGCCTTAGGGTCTGATAAACGT | + |
|
Preference number: 6 (lower is better) Translates to: CGRPANRLWGSPLPP*KPAFHGTALGSDKR Trigger: ACGTTTATCAGACCCTAAGGCAGTACCATGAAAAGCTGGTTTCAAGGGAGGAAGAGGACTTCCCCATAGCCTATTCGCTGGTCGTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CCA 72 bp | GGAGGTCTGATAAGCAGTTCCAATCGGCCTGGAGCCTaGATATGTGAGCATACTCCACAGTCTCTAATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGLISSSNRPGA*ICEHTPQSLIW Trigger: CCAAATTAGAGACTGTGGAGTATGCTCACATATCCAGGCTCCAGGCCGATTGGAACTGCTTATCAGACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CCA 72 bp | TCTTACTCTGCAGGTCAGACACGTCCTGAGATGAACTaGAAATTCCCCCGGGTATTCCTGGTATCCGGATTA | + |
|
Preference number: 6 (lower is better) Translates to: SYSAGQTRPEMN*KFPRVFLVSGL Trigger: TAATCCGGATACCAGGAATACCCGGGGGAATTTCCAGTTCATCTCAGGACGTGTCTGACCTGCAGAGTAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS TCA 72 bp | GATAAGCAGTTCCAATCGGCCTGGAGCCTGGATATGTaGGCATACTCCACAGTCTCTAATTTGGAAGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: DKQFQSAWSLDM*AYSTVSNLEAM Trigger: CATCGCTTCCAAATTAGAGACTGTGGAGTATGCTCACATATCCAGGCTCCAGGCCGATTGGAACTGCTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS TCA 72 bp | AATTGGGGTAGAGAAAGCCTTCGTAGTAAAACCATTTaGCCAGGCGGGTCTTACTCTGCAGGTCAGACACGT | + |
|
Preference number: 6 (lower is better) Translates to: NWGRESLRSKTI*PGGSYSAGQTR Trigger: ACGTGTCTGACCTGCAGAGTAAGACCCGCCTGGTCAAATGGTTTTACTACGAAGGCTTTCTCTACCCCAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CAA 72 bp | GAAGCGATGAAGATATTGGGGAAGCACTTAGCTAGGTaGTTCATGGCAGCTTTGAACGTGTCCGGTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: EAMKILGKHLAR*FMAALNVSGDF Trigger: GAAGTCACCGGACACGTTCAAAGCTGCCATGAACAACCTAGCTAAGTGCTTCCCCAATATCTTCATCGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS GCA 72 bp | GGTATTCCTGGTATCCGGATTAAGGTGGCCCAAAAGTaGTCGTCAGGAGAATATGTATCTTTAGACCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GIPGIRIKVAQK*SSGEYVSLDQA Trigger: TGCCTGGTCTAAAGATACATATTCTCCTGACGAGCACTTTTGGGCCACCTTAATCCGGATACCAGGAATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS GCA 72 bp | CTCCGTAAATACACACACTTCGAAGGTGAGAGCCAGTaGAATTGGGGTAGAGAAAGCCTTCGTAGTAAAACC | + |
|
Preference number: 6 (lower is better) Translates to: LRKYTHFEGESQ*NWGRESLRSKT Trigger: GGTTTTACTACGAAGGCTTTCTCTACCCCAATTGCACTGGCTCTCACCTTCGAAGTGTGTGTATTTACGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CCA 72 bp | AAATTCCCCCGGGTATTCCTGGTATCCGGATTAAGGTaGCCCAAAAGTGCTCGTCAGGAGAATATGTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: KFPRVFLVSGLR*PKSARQENMYL Trigger: AAGATACATATTCTCCTGACGAGCACTTTTGGGCCACCTTAATCCGGATACCAGGAATACCCGGGGGAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CCA 72 bp | CCACAAATACCTGAATGTTATGAGGGGGTGCCCCCTTaGAGACGTTCGTCTTTACTGGTAGCTTCATATAAT | + |
|
Preference number: 6 (lower is better) Translates to: PQIPECYEGVPP*RRSSLLVASYN Trigger: ATTATATGAAGCTACCAGTAAAGACGAACGTCTCCAAGGGGGCACCCCCTCATAACATTCAGGTATTTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||
| CDS CAA 72 bp | TACTCCACAGTCTCTAATTTGGAAGCGATGAAGATATaGGGGAAGCACTTAGCTAGGTTGTTCATGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: YSTVSNLEAMKI*GKHLARLFMAA Trigger: AGCTGCCATGAACAACCTAGCTAAGTGCTTCCCCAATATCTTCATCGCTTCCAAATTAGAGACTGTGGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171324.3 |
||