Pregenerated sensors for GCNT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032226Ensembl transcript IDs: ENSMUST00000034751.6
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTTCCTCCTGAGGGAAGGGCCAGGAATAGTCACAGCTGCTGGCTaGAGGGTTCTGAAGACTTCTGATTTCATGGCACTGTCACCTCTG | + |
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Preference number: 1 (lower is better) Translates to: SFLLREGPGIVTAAG*RVLKTSDFMALSPL Trigger: CAGAGGTGACAGTGCCATGAAATCAGAAGTCTTCAGAACCCTTCAGCCAGCAGCTGTGACTATTCCTGGCCCTTCCCTCAGGAGGAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR CCA 90 bp | GCACATACTCAGCAAACCAGTCCAATCACTCTGTTCTTCCCCTCATaGAAAATTCAGAATCTACCAAGGAAAGCAAGACTAGGAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: AHTQQTSPITLFFPS*KIQNLPRKARLGRL Trigger: AAGCCTTCCTAGTCTTGCTTTCCTTGGTAGATTCTGAATTTTCCATGAGGGGAAGAACAGAGTGATTGGACTGGTTTGCTGAGTATGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR TCA 90 bp | TGGATCTCTGAGTTGGAAGCCAGGCCTGTCTACAGAGTTCCAGGACAGCCAGAGTTCTGGATTCACAGATaGCACTGGAGGGGCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: WISELEARPVYRVPGQPEFWIHR*HWRGRA Trigger: AGCCCTGCCCCTCCAGTGTCATCTGTGAATCCAGAA...CTCTGGCTGTCCTGGAACTCTGTAGACAGGCCTGGCTTCCAACTCAGAGATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAAGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGGGTGGATCTCTGAGTTaGAAGCCAGGCCTGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: GPSVTACFVSGTFPFQRRGGSLS*KPGLST Trigger: TGTAGACAGGCCTGGCTTCCAACTCAGAGATCCACC...CCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACTTGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCCAAGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGGTCCCCACAGGGAAATaGCACAATCTACAAAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: GPSVTACFVSGTFPFQRRVPTGK*HNLQSG Trigger: GCCACTTTGTAGATTGTGCCATTTCCCTGTGGGGAC...CCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACTTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR GCA 90 bp | TGCTCCTTACAGACTGGAATGCATACAGGCCAAAAATTAGCTCTGGGTTTTCAGCTATCTACCCCACACTaGCCCAGTAGGTCCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: CSLQTGMHTGQKLALGFQLSTPH*PSRSWH Trigger: ATGCCAGGACCTACTGGGGCAGTGTGGGGTAGATAG...CTGAAAACCCAGAGCTAATTTTTGGCCTGTATGCATTCCAGTCTGTAAGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR GCA 90 bp | GGGCCAAGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGAGGAATAGTCACAGCTaGTGGCTGAAGGGTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: GPSVTACFVSGTFPFQRRRNSHS*WLKGSE Trigger: TTCAGAACCCTTCAGCCAGCAGCTGTGACTATTCCT...CCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACTTGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR GCA 90 bp | GGGCCAAGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGACAGATGTGCTGGGTTaGCTATGTGACCTTGAATGT | + |
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Preference number: 2 (lower is better) Translates to: GPSVTACFVSGTFPFQRRTDVLG*LCDLEC Trigger: ACATTCAAGGTCACATAGGCAACCCAGCACATCTGT...CCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACTTGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR CCA 90 bp | CTTACAGACTGGAATGCATACAGGCCAAAAATTAGCTCTGGGTTTTCAGAGAAGATCCTAAGGGACACATaGAGTCTAGAGCCCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: LTDWNAYRPKISSGFSEKILRDT*SLEPQL Trigger: TAGCTGGGGCTCTAGACTCCATGTGTCCCTTAGGAT...CTTCTCTGAAAACCCAGAGCTAATTTTTGGCCTGTATGCATTCCAGTCTGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGGTTAATCTGGCTGAAGGGTTCTaGAGACTTCTGATTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: SVTACFVSGTFPFQRRVNLAEGF*RLLISW Trigger: CCATGAAATCAGAAGTCTTCAGAACCCTTCAGCCAG...ATTAACCCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCTTACAGACTGGAATGCATACAGGCCAAAAATTAGCTCTGGGTTTTCAGGGCAAACAGCGAGACTaGTATTCACACAATGAAATA | + |
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Preference number: 2 (lower is better) Translates to: CSLQTGMHTGQKLALGFQGKQRD*YSHNEI Trigger: TATTTCATTGTGTGAATATCAGTCTCGCTGTTTGCC...CTGAAAACCCAGAGCTAATTTTTGGCCTGTATGCATTCCAGTCTGTAAGGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCTTACAGACTGGAATGCATACAGGCCAAAAATTAGCTCTGGGTTTTCAGCTGTTCTTCCCCTCATaGAAAATTCAGAATCTACCA | + |
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Preference number: 2 (lower is better) Translates to: CSLQTGMHTGQKLALGFQLFFPS*KIQNLP Trigger: TGGTAGATTCTGAATTTTCCATGAGGGGAAGAACAG...CTGAAAACCCAGAGCTAATTTTTGGCCTGTATGCATTCCAGTCTGTAAGGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR TCA 72 bp | CTGAGGGAAGGGCCAGGAATAGTCACAGCTGCTGGCTaGAGGGTTCTGAAGACTTCTGATTTCATGGCACTG | + |
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Preference number: 3 (lower is better) Translates to: LREGPGIVTAAG*RVLKTSDFMAL Trigger: CAGTGCCATGAAATCAGAAGTCTTCAGAACCCTTCAGCCAGCAGCTGTGACTATTCCTGGCCCTTCCCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR CCA 72 bp | TTTCATGTTCTAGCTCTGCGAGGAAGCCAAAGAAGTTaGGGAGGGAGCTGGAGAATAGCCACCTTCACCAGC | + |
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Preference number: 3 (lower is better) Translates to: FHVLALRGSQRS*GGSWRIATFTS Trigger: GCTGGTGAAGGTGGCTATTCTCCAGCTCCCTCCCCAACTTCTTTGGCTTCCTCGCAGAGCTAGAACATGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR CCA 72 bp | CCTGACAGGAAGTCTTCAGCCAAAATCCAGGGTCCCTaGTCACATGTCCCCTCCCTTATTATCCCAAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: PDRKSSAKIQGP*SHVPSLIIPSN Trigger: GTTACTTGGGATAATAAGGGAGGGGACATGTGACCAGGGACCCTGGATTTTGGCTGAAGACTTCCTGTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR TCA 72 bp | AGTCACAGCTGCTGGCTGAAGGGTTCTGAAGACTTCTaGTTTCATGGCACTGTCACCTCTGAGGTAAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: SHSCWLKGSEDF*FHGTVTSEVRL Trigger: CAACCTTACCTCAGAGGTGACAGTGCCATGAAATCAGAAGTCTTCAGAACCCTTCAGCCAGCAGCTGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR CAA 90 bp | GGGCCAAGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGAGCTTTGGGGAAAACTaGACCATGAAGAATCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: GPSVTACFVSGTFPFQRRSFGEN*TMKNLA Trigger: AGCCAGATTCTTCATGGTCAAGTTTTCCCCAAAGCT...CCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACTTGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR CAA 90 bp | GTCCTCAGCACACGAGTAATGCCTCACATATTTTTCCTGCTTACATTATTTCTGAGGAAGCCAAAGAAGTaGGGGAGGGAGCTGGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: VLSTRVMPHIFFLLTLFLRKPKK*GRELEN Trigger: ATTCTCCAGCTCCCTCCCCAACTTCTTTGGCTTCCT...CAGAAATAATGTAAGCAGGAAAAATATGTGAGGCATTACTCGTGTGCTGAGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGGTTAATACCTCTGAGGTAAGGTaGCGGGCAAGGACTCAATAT | + |
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Preference number: 3 (lower is better) Translates to: SVTACFVSGTFPFQRRVNTSEVR*RARTQY Trigger: ATATTGAGTCCTTGCCCGCAACCTTACCTCAGAGGT...ATTAACCCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR TCA 72 bp | AAGGACTCAATATTGCTGTGTTGGGTAAGTTTGTGGTaGCAATGCCCATTACCCACAGAAGCCAATCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: KDSILLCWVSLW*QCPLPTEANLK Trigger: TTTAAGATTGGCTTCTGTGGGTAATGGGCATTGTCACCACAAACTTACCCAACACAGCAATATTGAGTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR TCA 72 bp | GCGAGATACATAAGGATAGACCTTTGGTTTGGTCAGTaGAGGCGTTTTAAGGCAGACAAGATATTAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: ARYIRIDLWFGQ*RRFKADKILVS Trigger: AGAGACTAATATCTTGTCTGCCTTAAAACGCCTTCACTGACCAAACCAAAGGTCTATCCTTATGTATCTCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR TCA 72 bp | AAGCGTGATCCTTCTGATTGGATGACCTCATGCTATTaGACAAACTACTTTCATCCACCCAACACATTTTCT | + |
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Preference number: 3 (lower is better) Translates to: KRDPSDWMTSCY*TNYFHPPNTFS Trigger: AGAAAATGTGTTGGGTGGATGAAAGTAGTTTGTTCAATAGCATGAGGTCATCCAATCAGAAGGATCACGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR CCA 72 bp | TATGGAAAGCTACTGCTCAGTTTATTACAAAAGCTTTaGGGAAAACTTGACCATGAAGAATCTGGCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: YGKLLLSLLQKL*GKLDHEESGFF Trigger: AAAGAAGCCAGATTCTTCATGGTCAAGTTTTCCCCAAAGCTTTTGTAATAAACTGAGCAGTAGCTTTCCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | CGGAGACTTCTTCCCAGCCACCAGACACTAACTGTCCTCAGCACACGAGTAATGATCCACGAGGCACGCTaGAGGGTGGCCCAAAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: RRLLPSHQTLTVLSTRVMIHEAR*RVAQRC Trigger: GCACCTTTGGGCCACCCTCCAGCGTGCCTCGTGGAT...CATTACTCGTGTGCTGAGGACAGTTAGTGTCTGGTGGCTGGGAAGAAGTCTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR TCA 90 bp | TGGATCTCTGAGTTGGAAGCCAGGCCTGTCTACAGAGTTCCAGGACAGCCAGAGCATGGCACGGGGCTCTaGAGCAAGTCTTCCATGCAG | + |
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Preference number: 4 (lower is better) Translates to: WISELEARPVYRVPGQPEHGTGL*SKSSMQ Trigger: CTGCATGGAAGACTTGCTTCAGAGCCCCGTGCCATG...CTCTGGCTGTCCTGGAACTCTGTAGACAGGCCTGGCTTCCAACTCAGAGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR GCA 90 bp | TGGATCTCTGAGTTGGAAGCCAGGCCTGTCTACAGAGTTCCAGGACAGCCAGAGGAAGTGCTCACAGTCTaGTGTCATCCTAAGGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: WISELEARPVYRVPGQPEEVLTV*CHPKVV Trigger: GACTACCTTAGGATGACAGCAGACTGTGAGCACTTC...CTCTGGCTGTCCTGGAACTCTGTAGACAGGCCTGGCTTCCAACTCAGAGATCCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR GCA 90 bp | TTCAGCCAAAATCCAGGGTCCCTGGTCACATGTCCCCTCCCTTATTATCCCAAGATGGCCCTGACTGCCTaGTTAAAGGGTTCTGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: FSQNPGSLVTCPLPYYPKMALTA*LKGSED Trigger: GTCTTCAGAACCCTTTAAGCAGGCAGTCAGGGCCAT...CTTGGGATAATAAGGGAGGGGACATGTGACCAGGGACCCTGGATTTTGGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR TCA 90 bp | CCACAGGGAAATGGCACAATCTACAAAGTGGCAAACAGCGAGACTGATATTCACGGTAGTCGGCCTCTGTaGAGAGCTGCTGCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PQGNGTIYKVANSETDIHGSRPL*RAAASS Trigger: AGAAGAAGCAGCAGCTCTTCACAGAGGCCGACTACC...GTGAATATCAGTCTCGCTGTTTGCCACTTTGTAGATTGTGCCATTTCCCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR TCA 90 bp | GGGCCAAGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGACACAGTATACATTCTaGGGGGTGTACACAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: GPSVTACFVSGTFPFQRRTQYTF*GVYTAR Trigger: GCGAGCTGTGTACACCCCTCAGAATGTATACTGTGT...CCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACTTGGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | CGGAGACTTCTTCCCAGCCACCAGACACTAACTGTCCTCAGCACACGAGTAATGTTGGGTCAAACTTGTTaGCCAAGAGGTGATGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RRLLPSHQTLTVLSTRVMLGQTC*PRGDGS Trigger: AGAACCATCACCTCTTGGCCAACAAGTTTGACCCAA...CATTACTCGTGTGCTGAGGACAGTTAGTGTCTGGTGGCTGGGAAGAAGTCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR TCA 90 bp | GGGCCAAGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGTCTCAGCATTGGTTTTaGTGGGAAAGTCTGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GPSVTACFVSGTFPFQRRSQHWF*WESLSH Trigger: GTGGGACAGACTTTCCCATCAAAACCAATGCTGAGA...CCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACTTGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR GCA 90 bp | TTCAGCCAAAATCCAGGGTCCCTGGTCACATGTCCCCTCCCTTATTATCCCAAGTTCTCAATCTTCTCATaGACCACCATGGAGTACGCA | + |
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Preference number: 4 (lower is better) Translates to: FSQNPGSLVTCPLPYYPKFSIFS*TTMEYA Trigger: TGCGTACTCCATGGTGGTGCATGAGAAGATTGAGAA...CTTGGGATAATAAGGGAGGGGACATGTGACCAGGGACCCTGGATTTTGGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | CTTACAGACTGGAATGCATACAGGCCAAAAATTAGCTCTGGGTTTTCAGAGAAGACGCAATGGGGAAGCTaGCCTCTTCCTTGCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LTDWNAYRPKISSGFSEKTQWGS*PLPCSV Trigger: CACTGAGCAAGGAAGAGGCCAGCTTCCCCATTGCGT...CTTCTCTGAAAACCCAGAGCTAATTTTTGGCCTGTATGCATTCCAGTCTGTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | TACATTATTTCTGGATTCACAGATGACACTGGAGGGGCAGGGCTTTGGTTTAGATCTCATGCACCACCATaGAGTACGCAATGGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: YIISGFTDDTGGAGLWFRSHAPP*STQWGS Trigger: GCTTCCCCATTGCGTACTCCATGGTGGTGCATGAGA...TCTAAACCAAAGCCCTGCCCCTCCAGTGTCATCTGTGAATCCAGAAATAATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | TTCACTGGGGAGTGTGTGCCTGTAAATGTACATAGTTTAGCATTTGTGCATATGGGTCAGCCTGCACCCTaGACCAGGAAGCATAGACCA | + |
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Preference number: 4 (lower is better) Translates to: FTGECVPVNVHSLAFVHMGQPAP*TRKHRP Trigger: TGGTCTATGCTTCCTGGTCCAGGGTGCAGGCTGACC...CATATGCACAAATGCTAAACTATGTACATTTACAGGCACACACTCCCCAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGCACACGAGTAATGCCTCACATATTTTTCCTGCTTACATTATTTCTGCAGACAGCCCGCTGGTaGATTCCTGAGCAAGACGTG | + |
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Preference number: 4 (lower is better) Translates to: VLSTRVMPHIFFLLTLFLQTARW*IPEQDV Trigger: CACGTCTTGCTCAGGAATCCACCAGCGGGCTGTCTG...CAGAAATAATGTAAGCAGGAAAAATATGTGAGGCATTACTCGTGTGCTGAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR GCA 90 bp | GGGCCAAGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGTCTGTGAAGAGCTGCTaGTTCTTCTTAATTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPSVTACFVSGTFPFQRRSVKSC*FFLISR Trigger: CCTGGAAATTAAGAAGAAGCAGCAGCTCTTCACAGA...CCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACTTGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR GCA 90 bp | GTGAAGCTAAGCACATACTCAGCAAACCAGTCCAATCACTCTGTTCTTCCCCTCGACTCCATACTGTTCTaGCCTTTCAATAGCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VKLSTYSANQSNHSVLPLDSILF*PFNSLR Trigger: CCTCAAGCTATTGAAAGGGCAGAACAGTATGGAGTC...GAGGGGAAGAACAGAGTGATTGGACTGGTTTGCTGAGTATGTGCTTAGCTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR GCA 90 bp | CCACAGGGAAATGGCACAATCTACAAAGTGGCAAACAGCGAGACTGATATTCACCTCTTGCTGGTCATGTaGAATGTGTCTGTCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: PQGNGTIYKVANSETDIHLLLVM*NVSVTS Trigger: TGAGGTGACAGACACATTGCACATGACCAGCAAGAG...GTGAATATCAGTCTCGCTGTTTGCCACTTTGTAGATTGTGCCATTTCCCTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | TTCAGCCAAAATCCAGGGTCCCTGGTCACATGTCCCCTCCCTTATTATCCCAAGATTATCATCCACCTTTaGGTCAAACTTGTTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: FSQNPGSLVTCPLPYYPKIIIHL*VKLVGQ Trigger: TTGGCCAACAAGTTTGACCCAAAGGTGGATGATAAT...CTTGGGATAATAAGGGAGGGGACATGTGACCAGGGACCCTGGATTTTGGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| 3UTR CAA 72 bp | AACTTAAGCCTTGGAAGGTGGGCCAAGTGTAACAGCTaGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: NLSLGRWAKCNS*LCFRDFSFPEK Trigger: CTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACTTGGCCCACCTTCCAAGGCTTAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR TCA 90 bp | CCACAGGGAAATGGCACAATCTACAAAGTGGCAAACAGCGAGACTGATATTCACCTGCTTAAAGGGTTCTaGAGACTTCTGATCCATGTG | + |
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Preference number: 4 (lower is better) Translates to: PQGNGTIYKVANSETDIHLLKGF*RLLIHV Trigger: CACATGGATCAGAAGTCTTCAGAACCCTTTAAGCAG...GTGAATATCAGTCTCGCTGTTTGCCACTTTGTAGATTGTGCCATTTCCCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | CTTACAGACTGGAATGCATACAGGCCAAAAATTAGCTCTGGGTTTTCAGAGAAGGCGTCTTCCTCTTGCTaGTCATGTGCAATGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LTDWNAYRPKISSGFSEKASSSC*SCAMCL Trigger: CAGACACATTGCACATGACCAGCAAGAGGAAGACGC...CTTCTCTGAAAACCCAGAGCTAATTTTTGGCCTGTATGCATTCCAGTCTGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR GCA 90 bp | TGCTCCTTACAGACTGGAATGCATACAGGCCAAAAATTAGCTCTGGGTTTTCAGGCCTCTGTGAAGAGCTaGTGCTTCTTCTTAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: CSLQTGMHTGQKLALGFQASVKS*CFFLIS Trigger: GGAAATTAAGAAGAAGCAGCAGCTCTTCACAGAGGC...CTGAAAACCCAGAGCTAATTTTTGGCCTGTATGCATTCCAGTCTGTAAGGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | CTTACAGACTGGAATGCATACAGGCCAAAAATTAGCTCTGGGTTTTCAGAGAAGCAGAGTCCAGATCCATaGCATCGAAGTCACACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LTDWNAYRPKISSGFSEKQSPDP*HRSHTS Trigger: TGAAGTGTGACTTCGATGCCATGGATCTGGACTCTG...CTTCTCTGAAAACCCAGAGCTAATTTTTGGCCTGTATGCATTCCAGTCTGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGCACACGAGTAATGCCTCACATATTTTTCCTGCTTACATTATTTCTGGATGGAACTCTTGGCTaGCAGCTTCAGGGTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: VLSTRVMPHIFFLLTLFLDGTLG*QLQGLV Trigger: TACAAGACCCTGAAGCTGCCAGCCAAGAGTTCCATC...CAGAAATAATGTAAGCAGGAAAAATATGTGAGGCATTACTCGTGTGCTGAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR TCA 90 bp | TTCACTGGGGAGTGTGTGCCTGTAAATGTACATAGTTTAGCATTTGTGCATATGCTGCAGTACTGGCTTTaGAATTCCTCAGAGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FTGECVPVNVHSLAFVHMLQYWL*NSSESR Trigger: TCTGGACTCTGAGGAATTTCAAAGCCAGTACTGCAG...CATATGCACAAATGCTAAACTATGTACATTTACAGGCACACACTCCCCAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR TCA 90 bp | AGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGGTTAATGGTTCTGAAGACTTCTaGTCCATGTGGACACAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SVTACFVSGTFPFQRRVNGSEDF*SMWTQY Trigger: ATACTGTGTCCACATGGATCAGAAGTCTTCAGAACC...ATTAACCCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR GCA 90 bp | TTCCCCTCATGGAAAATTCAGAATCTACCAAGGAAAGCAAGACTAGGAAGGCTTTGTACAGGAGATCCCTaGAGTACTGGCTTTGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: FPSWKIQNLPRKARLGRLCTGDP*STGFEI Trigger: AATTTCAAAGCCAGTACTGCAGGGATCTCCTGTACA...AAGCCTTCCTAGTCTTGCTTTCCTTGGTAGATTCTGAATTTTCCATGAGGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CCA 90 bp | AGCCTCATTCAAATTACACAAGTTAATTCGTACATAACCCCCTCTTCGGGGACAGTTCAGTCCCATAGATaGCTTTGTGACGTAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: SLIQITQVNSYITPSSGTVQSHR*LCDVNI Trigger: AATATTTACGTCACAAAGCCATCTATGGGACTGAAC...TGTCCCCGAAGAGGGGGTTATGTACGAATTAACTTGTGTAATTTGAATGAGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS TCA 90 bp | CAGCAGAGCCTGGGTCACCGCTTTCTGCTCCCCTCGAATGACCCCTaGGCAGTTGATGGAACTCTTGGCTGGCAGCTTCAGGGTCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QQSLGHRFLLPSNDP*AVDGTLGWQLQGLV Trigger: TACAAGACCCTGAAGCTGCCAGCCAAGAGTTCCATCAACTGCTCAGGGGTCATTCGAGGGGAGCAGAAAGCGGTGACCCAGGCTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS GCA 90 bp | GTTAGTCTCGCAATGGCTCTCATGTCTGACAGGTCAAATTTTCGATaGAAGGGATCTGATCCAGGCATCCACGAGGCACGCTGGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSLAMALMSDRSNFR*KGSDPGIHEARWRV Trigger: CACCCTCCAGCGTGCCTCGTGGATGCCTGGATCAGATCCCTTGCATCGAAAATTTGACCTGTCAGACATGAGAGCCATTGCGAGACTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS GCA 90 bp | GTGTACACAGCTCGCAGCAACCTTTCGAAGTTCTCAATCTTCTCATaGACCACCATGGAGTACGCAATGGGGAAGCTGGCCTCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VYTARSNLSKFSIFS*TTMEYAMGKLASSL Trigger: CAAGGAAGAGGCCAGCTTCCCCATTGCGTACTCCATGGTGGTGCATGAGAAGATTGAGAACTTCGAAAGGTTGCTGCGAGCTGTGTACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS TCA 90 bp | ATTCCTCAGAGTCCAGATCCATGGCATCGAAGTCACACTTCAGTCTaGGGGACAGTTTCAGGGCAAGGATGGCCAGTAGCATGTAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IPQSPDPWHRSHTSV*GTVSGQGWPVACSN Trigger: GTTGCTACATGCTACTGGCCATCCTTGCCCTGAAACTGTCCCTCAGACTGAAGTGTGACTTCGATGCCATGGATCTGGACTCTGAGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS GCA 90 bp | TGGAACTCTTGGCTGGCAGCTTCAGGGTCTTGTACAGGAGATCCCTaGAGTACTGGCTTTGAAATTCCTCAGAGTCCAGATCCATGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WNSWLAASGSCTGDP*STGFEIPQSPDPWH Trigger: ATGCCATGGATCTGGACTCTGAGGAATTTCAAAGCCAGTACTGCAGGGATCTCCTGTACAAGACCCTGAAGCTGCCAGCCAAGAGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS GCA 90 bp | TTCTTAATTTCCAGGTTATTCAGCAGAGCCTGGGTCACCGCTTTCTaGTCCCCTCGAATGACCCCTGAGCAGTTGATGGAACTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLISRLFSRAWVTAF*SPRMTPEQLMELLA Trigger: AGCCAAGAGTTCCATCAACTGCTCAGGGGTCATTCGAGGGGAGCAGAAAGCGGTGACCCAGGCTCTGCTGAATAACCTGGAAATTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS GCA 90 bp | TGGGACCTGTATAAACTTCCTCTTGGTCTTGAAGTGCTCACAGTCTaGTGTCATCCTAAGGTAGTCGGCCTCTGTGAAGAGCTGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: WDLYKLPLGLEVLTV*CHPKVVGLCEELLL Trigger: AAGCAGCAGCTCTTCACAGAGGCCGACTACCTTAGGATGACAGCAGACTGTGAGCACTTCAAGACCAAGAGGAAGTTTATACAGGTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CAA 90 bp | TGGATCTCTGAGTTGGAAGCCAGGCCTGTCTACAGAGTTCCAGGACAGCCAGAGTTGACCATCTCAGCATaGGTTTTGATGGGAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WISELEARPVYRVPGQPELTISA*VLMGKS Trigger: AGACTTTCCCATCAAAACCAATGCTGAGATGGTCAA...CTCTGGCTGTCCTGGAACTCTGTAGACAGGCCTGGCTTCCAACTCAGAGATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CCA 90 bp | TGTAAGGTGCCCCGTTCTCAATGTCTCCCTCATGGTCGTACCACTTaGTTAGTCTCGCAATGGCTCTCATGTCTGACAGGTCAAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CKVPRSQCLPHGRTT*LVSQWLSCLTGQIF Trigger: GAAAATTTGACCTGTCAGACATGAGAGCCATTGCGAGACTAACCAAGTGGTACGACCATGAGGGAGACATTGAGAACGGGGCACCTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CAA 90 bp | AGTGTAACAGCTTGCTTTGTTTCCGGGACTTTTCCTTTCCAGAGAAGGGTTAATGGCAGCTTCAGGGTCTaGTACAGGAGATCCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVTACFVSGTFPFQRRVNGSFRV*YRRSLQ Trigger: CTGCAGGGATCTCCTGTACAAGACCCTGAAGCTGCC...ATTAACCCTTCTCTGGAAAGGAAAAGTCCCGGAAACAAAGCAAGCTGTTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CAA 90 bp | CCACAGGGAAATGGCACAATCTACAAAGTGGCAAACAGCGAGACTGATATTCACAAGCTGGCCTCTTCCTaGCTCAGTGGGACCTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: PQGNGTIYKVANSETDIHKLASS*LSGTCI Trigger: TATACAGGTCCCACTGAGCAAGGAAGAGGCCAGCTT...GTGAATATCAGTCTCGCTGTTTGCCACTTTGTAGATTGTGCCATTTCCCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS TCA 90 bp | GGGACTATAGGTGTCTTTTACCCACTCGATCAGTTGCCGGGCTTTTaGGTTACTGAACACGTGTTCAATGAAGTCTCGAGAAGCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: GTIGVFYPLDQLPGF*VTEHVFNEVSRSHH Trigger: ATGGTGGCTTCTCGAGACTTCATTGAACACGTGTTCAGTAACTCAAAAGCCCGGCAACTGATCGAGTGGGTAAAAGACACCTATAGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CCA 90 bp | TCTCAATGTCTCCCTCATGGTCGTACCACTTGGTTAGTCTCGCAATaGCTCTCATGTCTGACAGGTCAAATTTTCGATGCAAGGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQCLPHGRTTWLVSQ*LSCLTGQIFDARDL Trigger: CAGATCCCTTGCATCGAAAATTTGACCTGTCAGACATGAGAGCCATTGCGAGACTAACCAAGTGGTACGACCATGAGGGAGACATTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CCA 90 bp | CTAAACACTGAAGAACATTATCATCCACCTTTGGGTCAAACTTGTTaGCCAAGAGGTGATGGTTCTGAAGTATCCAGTGCAGGTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNTEEHYHPPLGQTC*PRGDGSEVSSAGPL Trigger: CAGGGGACCTGCACTGGATACTTCAGAACCATCACCTCTTGGCCAACAAGTTTGACCCAAAGGTGGATGATAATGTTCTTCAGTGTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CAA 90 bp | TACATTATTTCTGGATTCACAGATGACACTGGAGGGGCAGGGCTTTGGTTTAGAAACTTCCTCTTGGTCTaGAAGTGCTCACAGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YIISGFTDDTGGAGLWFRNFLLV*KCSQSA Trigger: AGCAGACTGTGAGCACTTCAAGACCAAGAGGAAGTT...TCTAAACCAAAGCCCTGCCCCTCCAGTGTCATCTGTGAATCCAGAAATAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CAA 90 bp | CCACAGGGAAATGGCACAATCTACAAAGTGGCAAACAGCGAGACTGATATTCACATCTCAGCATTGGTTTaGATGGGAAAGTCTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQGNGTIYKVANSETDIHISALV*MGKSVP Trigger: TGGGACAGACTTTCCCATCAAAACCAATGCTGAGAT...GTGAATATCAGTCTCGCTGTTTGCCACTTTGTAGATTGTGCCATTTCCCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CAA 90 bp | AGCCTCATTCAAATTACACAAGTTAATTCGTACATAACCCCCTCTTCGGGGACATGCCCTTTCAATAGCTaGAGGGCCTTGACCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLIQITQVNSYITPSSGTCPFNS*RALTIS Trigger: TGAGATGGTCAAGGCCCTCAAGCTATTGAAAGGGCA...TGTCCCCGAAGAGGGGGTTATGTACGAATTAACTTGTGTAATTTGAATGAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CAA 90 bp | CTTACAGACTGGAATGCATACAGGCCAAAAATTAGCTCTGGGTTTTCAGAGAAGCTAGCTATGAAGACATaGGGGAAGCATGACACGATG | + |
|
Preference number: 5 (lower is better) Translates to: LTDWNAYRPKISSGFSEKLAMKT*GKHDTM Trigger: CATCGTGTCATGCTTCCCCAATGTCTTCATAGCTAG...CTTCTCTGAAAACCCAGAGCTAATTTTTGGCCTGTATGCATTCCAGTCTGTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CAA 90 bp | CTTACAGACTGGAATGCATACAGGCCAAAAATTAGCTCTGGGTTTTCAGAGAAGCATTATCATCCACCTTaGGGTCAAACTTGTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTDWNAYRPKISSGFSEKHYHPP*GQTCWP Trigger: TGGCCAACAAGTTTGACCCAAAGGTGGATGATAATG...CTTCTCTGAAAACCCAGAGCTAATTTTTGGCCTGTATGCATTCCAGTCTGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS-3UTR CAA 90 bp | TTCACTGGGGAGTGTGTGCCTGTAAATGTACATAGTTTAGCATTTGTGCATATGTGTATAAACTTCCTCTaGGTCTTGAAGTGCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FTGECVPVNVHSLAFVHMCINFL*VLKCSQ Trigger: CTGTGAGCACTTCAAGACCAAGAGGAAGTTTATACA...CATATGCACAAATGCTAAACTATGTACATTTACAGGCACACACTCCCCAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 90 bp | GCCTGGGTCACCGCTTTCTGCTCCCCTCGAATGACCCCTGAGCAGTaGATGGAACTCTTGGCTGGCAGCTTCAGGGTCTTGTACAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AWVTAFCSPRMTPEQ*MELLAGSFRVLYRR Trigger: TCTCCTGTACAAGACCCTGAAGCTGCCAGCCAAGAGTTCCATCAACTGCTCAGGGGTCATTCGAGGGGAGCAGAAAGCGGTGACCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS TCA 72 bp | CTGGGTCACCGCTTTCTGCTCCCCTCGAATGACCCCTaGGCAGTTGATGGAACTCTTGGCTGGCAGCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGHRFLLPSNDP*AVDGTLGWQLQ Trigger: CTGAAGCTGCCAGCCAAGAGTTCCATCAACTGCTCAGGGGTCATTCGAGGGGAGCAGAAAGCGGTGACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 72 bp | ACCGCTTTCTGCTCCCCTCGAATGACCCCTGAGCAGTaGATGGAACTCTTGGCTGGCAGCTTCAGGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TAFCSPRMTPEQ*MELLAGSFRVL Trigger: CAAGACCCTGAAGCTGCCAGCCAAGAGTTCCATCAACTGCTCAGGGGTCATTCGAGGGGAGCAGAAAGCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS TCA 72 bp | GAGGTGATGGTTCTGAAGTATCCAGTGCAGGTCCCCTaGCCCATAAACACAGACAGCCCGCTGGTGGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: EVMVLKYPVQVP*PINTDSPLVDS Trigger: GGAATCCACCAGCGGGCTGTCTGTGTTTATGGGTCAGGGGACCTGCACTGGATACTTCAGAACCATCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS GCA 72 bp | TCCAGGTTATTCAGCAGAGCCTGGGTCACCGCTTTCTaGTCCCCTCGAATGACCCCTGAGCAGTTGATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRLFSRAWVTAF*SPRMTPEQLME Trigger: TTCCATCAACTGCTCAGGGGTCATTCGAGGGGAGCAGAAAGCGGTGACCCAGGCTCTGCTGAATAACCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS GCA 72 bp | GCTCGCAGCAACCTTTCGAAGTTCTCAATCTTCTCATaGACCACCATGGAGTACGCAATGGGGAAGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARSNLSKFSIFS*TTMEYAMGKLA Trigger: GGCCAGCTTCCCCATTGCGTACTCCATGGTGGTGCATGAGAAGATTGAGAACTTCGAAAGGTTGCTGCGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CCA 72 bp | TCTCAATCTTCTCATGCACCACCATGGAGTACGCAATaGGGAAGCTGGCCTCTTCCTTGCTCAGTGGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: SQSSHAPPWSTQ*GSWPLPCSVGP Trigger: AGGTCCCACTGAGCAAGGAAGAGGCCAGCTTCCCCATTGCGTACTCCATGGTGGTGCATGAGAAGATTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 72 bp | GCCCCGTTCTCAATGTCTCCCTCATGGTCGTACCACTaGGTTAGTCTCGCAATGGCTCTCATGTCTGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: APFSMSPSWSYH*VSLAMALMSDR Trigger: CCTGTCAGACATGAGAGCCATTGCGAGACTAACCAAGTGGTACGACCATGAGGGAGACATTGAGAACGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS TCA 72 bp | AGTCCAGATCCATGGCATCGAAGTCACACTTCAGTCTaGGGGACAGTTTCAGGGCAAGGATGGCCAGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPDPWHRSHTSV*GTVSGQGWPVA Trigger: TGCTACTGGCCATCCTTGCCCTGAAACTGTCCCTCAGACTGAAGTGTGACTTCGATGCCATGGATCTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CCA 72 bp | CCCCGTTCTCAATGTCTCCCTCATGGTCGTACCACTTaGTTAGTCTCGCAATGGCTCTCATGTCTGACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRSQCLPHGRTT*LVSQWLSCLTG Trigger: ACCTGTCAGACATGAGAGCCATTGCGAGACTAACCAAGTGGTACGACCATGAGGGAGACATTGAGAACGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 90 bp | TCATGCACCACCATGGAGTACGCAATGGGGAAGCTGGCCTCTTCCTaGCTCAGTGGGACCTGTATAAACTTCCTCTTGGTCTTGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCTTMEYAMGKLASS*LSGTCINFLLVLKC Trigger: GCACTTCAAGACCAAGAGGAAGTTTATACAGGTCCCACTGAGCAAGGAAGAGGCCAGCTTCCCCATTGCGTACTCCATGGTGGTGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS TCA 72 bp | GTCAGCCTGCACCCTGGACCAGGAAGCATAGACCACTaGCACCAACTTACTAGCTATGAAGACATTGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSLHPGPGSIDH*HQLTSYEDIGE Trigger: TTCCCCAATGTCTTCATAGCTAGTAAGTTGGTGTCAGTGGTCTATGCTTCCTGGTCCAGGGTGCAGGCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS GCA 72 bp | TGGCTGGCAGCTTCAGGGTCTTGTACAGGAGATCCCTaGAGTACTGGCTTTGAAATTCCTCAGAGTCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: WLAASGSCTGDP*STGFEIPQSPD Trigger: ATCTGGACTCTGAGGAATTTCAAAGCCAGTACTGCAGGGATCTCCTGTACAAGACCCTGAAGCTGCCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CCA 72 bp | TGCTTCTTCTTAATTTCCAGGTTATTCAGCAGAGCCTaGGTCACCGCTTTCTGCTCCCCTCGAATGACCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CFFLISRLFSRA*VTAFCSPRMTP Trigger: AGGGGTCATTCGAGGGGAGCAGAAAGCGGTGACCCAGGCTCTGCTGAATAACCTGGAAATTAAGAAGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CCA 72 bp | AAAGTCTGTCCCACAGGTGTTCAGGAGGTATTTCCATaGCACGGGGCTCTGAAGCAAGTCTTCCATGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: KVCPTGVQEVFP*HGALKQVFHAV Trigger: AACTGCATGGAAGACTTGCTTCAGAGCCCCGTGCCATGGAAATACCTCCTGAACACCTGTGGGACAGACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 90 bp | TGGCAGCTTCAGGGTCTTGTACAGGAGATCCCTGCAGTACTGGCTTaGAAATTCCTCAGAGTCCAGATCCATGGCATCGAAGTCACACTT | + |
|
Preference number: 6 (lower is better) Translates to: WQLQGLVQEIPAVLA*KFLRVQIHGIEVTL Trigger: AAGTGTGACTTCGATGCCATGGATCTGGACTCTGAGGAATTTCAAAGCCAGTACTGCAGGGATCTCCTGTACAAGACCCTGAAGCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS TCA 72 bp | CACCAACTTACTAGCTATGAAGACATTGGGGAAGCATaGCACGATGGCCCTGACTGCCTGCTTAAAGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HQLTSYEDIGEA*HDGPDCLLKGF Trigger: GAACCCTTTAAGCAGGCAGTCAGGGCCATCGTGTCATGCTTCCCCAATGTCTTCATAGCTAGTAAGTTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 72 bp | CAGGGTCTTGTACAGGAGATCCCTGCAGTACTGGCTTaGAAATTCCTCAGAGTCCAGATCCATGGCATCGAA | + |
|
Preference number: 6 (lower is better) Translates to: QGLVQEIPAVLA*KFLRVQIHGIE Trigger: TTCGATGCCATGGATCTGGACTCTGAGGAATTTCAAAGCCAGTACTGCAGGGATCTCCTGTACAAGACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 72 bp | AATAGCTTGAGGGCCTTGACCATCTCAGCATTGGTTTaGATGGGAAAGTCTGTCCCACAGGTGTTCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NSLRALTISALV*MGKSVPQVFRR Trigger: CCTCCTGAACACCTGTGGGACAGACTTTCCCATCAAAACCAATGCTGAGATGGTCAAGGCCCTCAAGCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 90 bp | CTGTTCTGCCCTTTCAATAGCTTGAGGGCCTTGACCATCTCAGCATaGGTTTTGATGGGAAAGTCTGTCCCACAGGTGTTCAGGAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: LFCPFNSLRALTISA*VLMGKSVPQVFRRY Trigger: ATACCTCCTGAACACCTGTGGGACAGACTTTCCCATCAAAACCAATGCTGAGATGGTCAAGGCCCTCAAGCTATTGAAAGGGCAGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 90 bp | ACCTCTGACTCCATACTGTTCTGCCCTTTCAATAGCTTGAGGGCCTaGACCATCTCAGCATTGGTTTTGATGGGAAAGTCTGTCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: TSDSILFCPFNSLRA*TISALVLMGKSVPQ Trigger: CTGTGGGACAGACTTTCCCATCAAAACCAATGCTGAGATGGTCAAGGCCCTCAAGCTATTGAAAGGGCAGAACAGTATGGAGTCAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 90 bp | GGAGGTGGTACCTCTGACTCCATACTGTTCTGCCCTTTCAATAGCTaGAGGGCCTTGACCATCTCAGCATTGGTTTTGATGGGAAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GGGTSDSILFCPFNS*RALTISALVLMGKS Trigger: AGACTTTCCCATCAAAACCAATGCTGAGATGGTCAAGGCCCTCAAGCTATTGAAAGGGCAGAACAGTATGGAGTCAGAGGTACCACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS TCA 72 bp | GGTGTCTTTTACCCACTCGATCAGTTGCCGGGCTTTTaGGTTACTGAACACGTGTTCAATGAAGTCTCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GVFYPLDQLPGF*VTEHVFNEVSR Trigger: TCTCGAGACTTCATTGAACACGTGTTCAGTAACTCAAAAGCCCGGCAACTGATCGAGTGGGTAAAAGACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CAA 72 bp | TCTTCCTTGCTCAGTGGGACCTGTATAAACTTCCTCTaGGTCTTGAAGTGCTCACAGTCTGCTGTCATCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SSLLSGTCINFL*VLKCSQSAVIL Trigger: TAGGATGACAGCAGACTGTGAGCACTTCAAGACCAAGAGGAAGTTTATACAGGTCCCACTGAGCAAGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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| CDS CCA 72 bp | GAAGAACATTATCATCCACCTTTGGGTCAAACTTGTTaGCCAAGAGGTGATGGTTCTGAAGTATCCAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: EEHYHPPLGQTC*PRGDGSEVSSA Trigger: TGCACTGGATACTTCAGAACCATCACCTCTTGGCCAACAAGTTTGACCCAAAGGTGGATGATAATGTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034751.6 |
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