Pregenerated sensors for GCNT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038843Ensembl transcript IDs: ENSMUST00000169897.2, ENSMUST00000174236.8, ENSMUST00000235184.2, ENSMUST00000236139.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCTCCAGTATAAAGCAAACTGGGACAGATATGTTGACCACCGGTaGCCCCAGGCTGGGGTTCCTGCTTGCTGGATCCCTAGACTACTG | + |
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Preference number: 1 (lower is better) Translates to: FLQYKANWDRYVDHR*PQAGVPACWIPRLL Trigger: CAGTAGTCTAGGGATCCAGCAAGCAGGAACCCCAGCCTGGGGTCACCGGTGGTCAACATATCTGTCCCAGTTTGCTTTATACTGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR CCA 90 bp | AGTATAGAGGGTATCAGCTGCATCACCATCATTGCTGGTGGCCCATaGCCAACACATTTCTATTGGTCCAAAACAAACCCCAGCTCGTCT | + |
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Preference number: 1 (lower is better) Translates to: SIEGISCITIIAGGP*PTHFYWSKTNPSSS Trigger: AGACGAGCTGGGGTTTGTTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGATACCCTCTATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR CCA 90 bp | AGAAGCCAGTATAGAGGGTATCAGCTGCATCACCATCATTGCTGGTaGCCCATGGCCAACACATTTCTATTGGTCCAAAACAAACCCCAG | + |
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Preference number: 1 (lower is better) Translates to: RSQYRGYQLHHHHCW*PMANTFLLVQNKPQ Trigger: CTGGGGTTTGTTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGATACCCTCTATACTGGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR CCA 90 bp | ATCAGAAGCCAGTATAGAGGGTATCAGCTGCATCACCATCATTGCTaGTGGCCCATGGCCAACACATTTCTATTGGTCCAAAACAAACCC | + |
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Preference number: 1 (lower is better) Translates to: IRSQYRGYQLHHHHC*WPMANTFLLVQNKP Trigger: GGGTTTGTTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGATACCCTCTATACTGGCTTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR TCA 90 bp | GAAGACAGAGCCATTCGTGCCAAACATATTTTAAGCTCCCTGAGATaGCGCGTGGAGACTCACTACCCAAAATCACAGCAGGAAGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: EDRAIRAKHILSSLR*RVETHYPKSQQEGN Trigger: ATTTCCTTCCTGCTGTGATTTTGGGTAGTGAGTCTCCACGCGTCATCTCAGGGAGCTTAAAATATGTTTGGCACGAATGGCTCTGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR GCA 90 bp | GAAATCAGAAGCCAGTATAGAGGGTATCAGCTGCATCACCATCATTaGTGGTGGCCCATGGCCAACACATTTCTATTGGTCCAAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: EIRSQYRGYQLHHHH*WWPMANTFLLVQNK Trigger: TTTGTTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGATACCCTCTATACTGGCTTCTGATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR GCA 90 bp | CTGGACAAAAGAAAGAAATCAGAAGCCAGTATAGAGGGTATCAGCTaGATCACCATCATTGCTGGTGGCCCATGGCCAACACATTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: LDKRKKSEASIEGIS*ITIIAGGPWPTHFY Trigger: ATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGATACCCTCTATACTGGCTTCTGATTTCTTTCTTTTGTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR GCA 90 bp | AAATTAGTGTTTATTAACAAACATGACTCCAACATAAACAAAGCCTaGCTCTCTCCACGTGAACTGGAACTGTACTCTTCTCGAGTGTCT | + |
|
Preference number: 1 (lower is better) Translates to: KLVFINKHDSNINKA*LSPRELELYSSRVS Trigger: AGACACTCGAGAAGAGTACAGTTCCAGTTCACGTGGAGAGAGGCAGGCTTTGTTTATGTTGGAGTCATGTTTGTTAATAAACACTAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR TCA 90 bp | TTTGGCATAAATCAAATCTCATTTAGATTAAGTACCTGGATTCTCTaGTTAGTTCTCGAGGCTGACATTTTTCACTGGCCTCTTTCCCAA | + |
|
Preference number: 1 (lower is better) Translates to: FGINQISFRLSTWIL*LVLEADIFHWPLSQ Trigger: TTGGGAAAGAGGCCAGTGAAAAATGTCAGCCTCGAGAACTAATCAGAGAATCCAGGTACTTAATCTAAATGAGATTTGATTTATGCCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAGACACGGTAAACAGACACTGTACAAGCCCTGTGTCAGGCACTGGGCCACTTATGTTGACCACCGGTaGCCCCAGGCTGGGGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VRHGKQTLYKPCVRHWATYVDHR*PQAGVP Trigger: AGGAACCCCAGCCTGGGGTCACCGGTGGTCAACATA...AGTGGCCCAGTGCCTGACACAGGGCTTGTACAGTGTCTGTTTACCGTGTCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGACACGGTAAACAGACACTGTACAAGCCCTGTGTCAGGCACTGGGCCACTGGGGTTCCTGCTTGCTaGATCCCTAGACTACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: VRHGKQTLYKPCVRHWATGVPAC*IPRLLP Trigger: AGGCAGTAGTCTAGGGATCCAGCAAGCAGGAACCCC...AGTGGCCCAGTGCCTGACACAGGGCTTGTACAGTGTCTGTTTACCGTGTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGACACGGTAAACAGACACTGTACAAGCCCTGTGTCAGGCACTGGGCCACTCATCACCATCATTGCTaGTGGCCCATGGCCAACACA | + |
|
Preference number: 2 (lower is better) Translates to: VRHGKQTLYKPCVRHWATHHHHC*WPMANT Trigger: TGTGTTGGCCATGGGCCACCAGCAATGATGGTGATG...AGTGGCCCAGTGCCTGACACAGGGCTTGTACAGTGTCTGTTTACCGTGTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR CAA 90 bp | AAGTTCAAGCGTTCCTCCAGTATAAAGCAAACTGGGACAGATATGTaGACCACCGGTGACCCCAGGCTGGGGTTCCTGCTTGCTGGATCC | + |
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Preference number: 2 (lower is better) Translates to: KFKRSSSIKQTGTDM*TTGDPRLGFLLAGS Trigger: GGATCCAGCAAGCAGGAACCCCAGCCTGGGGTCACCGGTGGTCAACATATCTGTCCCAGTTTGCTTTATACTGGAGGAACGCTTGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCCAATCACCTGGGTTCCCTCTGTCCATCAAGTCTTCCCAGCCTCCAGCCGAGATGGGAAGTAGATaGGAGTACAGTTTGAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: LSQSPGFPLSIKSSQPPAEMGSR*EYSLSN Trigger: GTTGCTCAAACTGTACTCTCATCTACTTCCCATCTC...GGCTGGAGGCTGGGAAGACTTGATGGACAGAGGGAACCCAGGTGATTGGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAGACACGGTAAACAGACACTGTACAAGCCCTGTGTCAGGCACTGGGCCACTGAGATGGGAAGTAGATaGGAGTACAGTTTGAGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: VRHGKQTLYKPCVRHWATEMGSR*EYSLSN Trigger: GTTGCTCAAACTGTACTCTCATCTACTTCCCATCTC...AGTGGCCCAGTGCCTGACACAGGGCTTGTACAGTGTCTGTTTACCGTGTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAGACACGGTAAACAGACACTGTACAAGCCCTGTGTCAGGCACTGGGCCACTGAGTTCTTGTTATCTTaGCCAGCCTTGCCACTATCA | + |
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Preference number: 2 (lower is better) Translates to: VRHGKQTLYKPCVRHWATEFLLS*PALPLS Trigger: TGATAGTGGCAAGGCTGGGCAAGATAACAAGAACTC...AGTGGCCCAGTGCCTGACACAGGGCTTGTACAGTGTCTGTTTACCGTGTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTACAAGCCCTGTGTCAGGCACTGGGCCACTACAGCATCAGACATGGTTCAAATTGCTGGTGGCCCATaGCCAACACATTTCTATTGG | + |
|
Preference number: 2 (lower is better) Translates to: LYKPCVRHWATTASDMVQIAGGP*PTHFYW Trigger: CCAATAGAAATGTGTTGGCCATGGGCCACCAGCAAT...TTGAACCATGTCTGATGCTGTAGTGGCCCAGTGCCTGACACAGGGCTTGTACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR CAA 90 bp | CTCAAGGCCAGAATGCCACCACCTGAGACACAATTGGATCATTTCTaGGGACCGAGCCAATTACTAGCCTTAAACTTGTGCCAGGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LKARMPPPETQLDHF*GPSQLLALNLCQGL Trigger: AAGCCCCTGGCACAAGTTTAAGGCTAGTAATTGGCTCGGTCCCAAGAAATGATCCAATTGTGTCTCAGGTGGTGGCATTCTGGCCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTCATGCAGTTTCCCTaGCAGGAAGACTTTAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: VFPASSHPNSVLTFPLEHFMQFP*QEDFKV Trigger: GACTTTAAAGTCTTCCTGTCAGGGAAACTGCATGAA...GTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTGCATCACCATCATTGCTGGTGGCCCATGGCCAACACATTTCTATTGGTCACCTGAGACACAATTaGATCATTTCTTGGGACCGA | + |
|
Preference number: 2 (lower is better) Translates to: SAASPSLLVAHGQHISIGHLRHN*IISWDR Trigger: TCGGTCCCAAGAAATGATCCAATTGTGTCTCAGGTG...ACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTACAAGCCCTGTGTCAGGCACTGGGCCACTACAGCATCAGACATGGTTCAACAGTATAAAGCAAACTaGGACAGATATGTTGACCAC | + |
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Preference number: 2 (lower is better) Translates to: LYKPCVRHWATTASDMVQQYKAN*DRYVDH Trigger: GTGGTCAACATATCTGTCCCAGTTTGCTTTATACTG...TTGAACCATGTCTGATGCTGTAGTGGCCCAGTGCCTGACACAGGGCTTGTACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCACCATCATTGCTGGTGGCCCATGGCCAACACATTTCTATTGGTCCAAAAGAGATGGGAAGTAGATaGGAGTACAGTTTGAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: ASPSLLVAHGQHISIGPKEMGSR*EYSLSN Trigger: GTTGCTCAAACTGTACTCTCATCTACTTCCCATCTC...TTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCACCATCATTGCTGGTGGCCCATGGCCAACACATTTCTATTGGTCCAAAACAGAATGCCACCACCTaGGACACAATTGGATCATTT | + |
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Preference number: 2 (lower is better) Translates to: ASPSLLVAHGQHISIGPKQNATT*DTIGSF Trigger: AAATGATCCAATTGTGTCTCAGGTGGTGGCATTCTG...TTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAGGAGTTCTTGTTATCTTaGCCAGCCTTGCCACTATCA | + |
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Preference number: 2 (lower is better) Translates to: RTHVYFSTSFPLIKATREEFLLS*PALPLS Trigger: TGATAGTGGCAAGGCTGGGCAAGATAACAAGAACTC...CTCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAGTGCACTAGTTACAGGTaGCTAGGTCACATCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: RTHVYFSTSFPLIKATRECTSYR*LGHIKD Trigger: GTCTTTGATGTGACCTAGGCACCTGTAACTAGTGCA...CTCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGATCCTCCCTAGTTTTCTaGACTAGTTACAGGTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: EDTCVLLYFFPPHQGHKRSSLVF*TSYRCL Trigger: TAGGCACCTGTAACTAGTGCAGAAAACTAGGGAGGA...TCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAGGCTGACATTTTTCACTaGCCTCTTTCCCAATCACCT | + |
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Preference number: 2 (lower is better) Translates to: RTHVYFSTSFPLIKATREADIFH*PLSQSP Trigger: AGGTGATTGGGAAAGAGGCCAGTGAAAAATGTCAGC...CTCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR CCA 90 bp | AACCAATCCCCTGCATTGGAGAGGAGAGACAGAACTGAAGAAACCCTAGACAGTCACCTGAGACACAATTaGATCATTTCTTGGGACCGA | + |
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Preference number: 2 (lower is better) Translates to: NQSPALERRDRTEETLDSHLRHN*IISWDR Trigger: TCGGTCCCAAGAAATGATCCAATTGTGTCTCAGGTG...ACTGTCTAGGGTTTCTTCAGTTCTGTCTCTCCTCTCCAATGCAGGGGATTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR GCA 90 bp | AAACAAACCCCAGCTCGTCTACTGATTCTCAGCTTTTCTAATAAGACTTGTCACCTAGCCTTAAACTTGTaGCAGGGGCTTAGCAACGGC | + |
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Preference number: 2 (lower is better) Translates to: KQTPARLLILSFSNKTCHLALNL*QGLSNG Trigger: GCCGTTGCTAAGCCCCTGGCACAAGTTTAAGGCTAG...GTGACAAGTCTTATTAGAAAAGCTGAGAATCAGTAGACGAGCTGGGGTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR TCA 90 bp | AACCAATCCCCTGCATTGGAGAGGAGAGACAGAACTGAAGAAACCCTAGACAGTACTTATAAGCAAAAATaGAGACAGAGCCATTCGTGC | + |
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Preference number: 2 (lower is better) Translates to: NQSPALERRDRTEETLDSTYKQK*RQSHSC Trigger: GCACGAATGGCTCTGTCTTCATTTTTGCTTATAAGT...ACTGTCTAGGGTTTCTTCAGTTCTGTCTCTCCTCTCCAATGCAGGGGATTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGAGTTCTTGTTATCTTGCCCAGCCTTGCCACTATCACTTGAGCTTAAACTTCATGCAGTTTCCCTaGCAGGAAGACTTTAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: EKSSCYLAQPCHYHLSLNFMQFP*QEDFKV Trigger: GACTTTAAAGTCTTCCTGTCAGGGAAACTGCATGAA...GTTTAAGCTCAAGTGATAGTGGCAAGGCTGGGCAAGATAACAAGAACTCTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR CCA 90 bp | AGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAGACAGTACGAACAGTTTaGGAAGACAAGATAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RTHVYFSTSFPLIKATRETVRTV*EDKIKN Trigger: GTTCTTTATCTTGTCTTCCCAAACTGTTCGTACTGT...CTCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGACAAATCCACTGGACAAAAGAAAGAAATCAGAAGCCAGTATAGAGGGTATTCTTTCCCAATCACCTaGGTTCCCTCTGTCCATCAA | + |
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Preference number: 2 (lower is better) Translates to: LDKSTGQKKEIRSQYRGYSFPIT*VPSVHQ Trigger: TTGATGGACAGAGGGAACCCAGGTGATTGGGAAAGA...ATACCCTCTATACTGGCTTCTGATTTCTTTCTTTTGTCCAGTGGATTTGTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGACAAATCCACTGGACAAAAGAAAGAAATCAGAAGCCAGTATAGAGGGTATCCCCAGCTCGTCTACTaGTTCTCAGCTTTTCTAATA | + |
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Preference number: 2 (lower is better) Translates to: LDKSTGQKKEIRSQYRGYPQLVY*FSAFLI Trigger: TATTAGAAAAGCTGAGAATCAGTAGACGAGCTGGGG...ATACCCTCTATACTGGCTTCTGATTTCTTTCTTTTGTCCAGTGGATTTGTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGACAAATCCACTGGACAAAAGAAAGAAATCAGAAGCCAGTATAGAGGGTATCAGTTTGCCTTTTGGTaGAAATACACTGTAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: LDKSTGQKKEIRSQYRGYQFAFW*KYTVMP Trigger: TGGCATTACAGTGTATTTTCACCAAAAGGCAAACTG...ATACCCTCTATACTGGCTTCTGATTTCTTTCTTTTGTCCAGTGGATTTGTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR TCA 72 bp | TATAAAGCAAACTGGGACAGATATGTTGACCACCGGTaGCCCCAGGCTGGGGTTCCTGCTTGCTGGATCCCT | + |
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Preference number: 3 (lower is better) Translates to: YKANWDRYVDHR*PQAGVPACWIP Trigger: AGGGATCCAGCAAGCAGGAACCCCAGCCTGGGGTCACCGGTGGTCAACATATCTGTCCCAGTTTGCTTTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR TCA 72 bp | CCCAAGGAGGACCCCATAGGAGAGATGGGAAGTAGATaGGAGTACAGTTTGAGCAACCTTATCTTCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PKEDPIGEMGSR*EYSLSNLIFPR Trigger: CCTGGGGAAGATAAGGTTGCTCAAACTGTACTCTCATCTACTTCCCATCTCTCCTATGGGGTCCTCCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTACAAGCCCTGTGTCAGGCACTGGGCCACTACAGCATCAGACATGGTTCAAGCCAACACATTTCTATaGGTCCAAAACAAACCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LYKPCVRHWATTASDMVQANTFL*VQNKPQ Trigger: CTGGGGTTTGTTTTGGACCAATAGAAATGTGTTGGC...TTGAACCATGTCTGATGCTGTAGTGGCCCAGTGCCTGACACAGGGCTTGTACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR GCA 72 bp | AGCCAGTATAGAGGGTATCAGCTGCATCACCATCATTaGTGGTGGCCCATGGCCAACACATTTCTATTGGTC | + |
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Preference number: 3 (lower is better) Translates to: SQYRGYQLHHHH*WWPMANTFLLV Trigger: GACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGATACCCTCTATACTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR CCA 72 bp | GGTATCAGCTGCATCACCATCATTGCTGGTGGCCCATaGCCAACACATTTCTATTGGTCCAAAACAAACCCC | + |
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Preference number: 3 (lower is better) Translates to: GISCITIIAGGP*PTHFYWSKTNP Trigger: GGGGTTTGTTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR-3UTR CAA 90 bp | GAGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAGATTCCCTTCTTCCCTaGGATGCCTACTTCATCCTC | + |
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Preference number: 3 (lower is better) Translates to: EDTCVLLYFFPPHQGHKRDSLLP*DAYFIL Trigger: GAGGATGAAGTAGGCATCCAAGGGAAGAAGGGAATC...TCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR TCA 72 bp | GCCATTCGTGCCAAACATATTTTAAGCTCCCTGAGATaGCGCGTGGAGACTCACTACCCAAAATCACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: AIRAKHILSSLR*RVETHYPKSQQ Trigger: CTGCTGTGATTTTGGGTAGTGAGTCTCCACGCGTCATCTCAGGGAGCTTAAAATATGTTTGGCACGAATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR GCA 72 bp | AGAAAGAAATCAGAAGCCAGTATAGAGGGTATCAGCTaGATCACCATCATTGCTGGTGGCCCATGGCCAACA | + |
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Preference number: 3 (lower is better) Translates to: RKKSEASIEGIS*ITIIAGGPWPT Trigger: TGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGATACCCTCTATACTGGCTTCTGATTTCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR GCA 72 bp | ACTACAGCATCAGACATGGTTCAACAAGTGCAATGGTaGGAAGGTGAGGTAACACAAAGCATGGGGCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: TTASDMVQQVQW*EGEVTQSMGLH Trigger: GTGAAGCCCCATGCTTTGTGTTACCTCACCTTCGCACCATTGCACTTGTTGAACCATGTCTGATGCTGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| 3UTR CCA 72 bp | CAGTATAGAGGGTATCAGCTGCATCACCATCATTGCTaGTGGCCCATGGCCAACACATTTCTATTGGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QYRGYQLHHHHC*WPMANTFLLVQ Trigger: TTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGATACCCTCTATACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAGCCTTGCCACTATCACTaGAGCTTAAACAATCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RTHVYFSTSFPLIKATREPCHYH*SLNNPP Trigger: AGGGGGATTGTTTAAGCTCAAGTGATAGTGGCAAGG...CTCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATCACCATCATTGCTGGTGGCCCATGGCCAACACATTTCTATTGGTCCAAAATTATCTTGCCCAGCCTaGCCACTATCACTTGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ASPSLLVAHGQHISIGPKLSCPA*PLSLEL Trigger: AAGCTCAAGTGATAGTGGCAAGGCTGGGCAAGATAA...TTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAAGAGTTCTTGTTATCTaGCCCAGCCTTGCCACTATC | + |
|
Preference number: 3 (lower is better) Translates to: EDTCVLLYFFPPHQGHKRRVLVI*PSLATI Trigger: GATAGTGGCAAGGCTGGGCAAGATAACAAGAACTCT...TCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGACAAATCCACTGGACAAAAGAAAGAAATCAGAAGCCAGTATAGAGGGTATGCTGCATCACCATCATaGCTGGTGGCCCATGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LDKSTGQKKEIRSQYRGYAASPS*LVAHGQ Trigger: TTGGCCATGGGCCACCAGCAATGATGGTGATGCAGC...ATACCCTCTATACTGGCTTCTGATTTCTTTCTTTTGTCCAGTGGATTTGTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR GCA 72 bp | TTCCCTTGGATGCCTACTTCATCCTCCCTAGTTTTCTaGACTAGTTACAGGTGCCTAGGTCACATCAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FPWMPTSSSLVF*TSYRCLGHIKD Trigger: GTCTTTGATGTGACCTAGGCACCTGTAACTAGTGCAGAAAACTAGGGAGGATGAAGTAGGCATCCAAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR CCA 72 bp | ATCATTGCTGGTGGCCCATGGCCAACACATTTCTATTaGTCCAAAACAAACCCCAGCTCGTCTACTGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: IIAGGPWPTHFY*SKTNPSSSTDS Trigger: AGAATCAGTAGACGAGCTGGGGTTTGTTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR CCA 72 bp | TATAGAGGGTATCAGCTGCATCACCATCATTGCTGGTaGCCCATGGCCAACACATTTCTATTGGTCCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: YRGYQLHHHHCW*PMANTFLLVQN Trigger: GTTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGATACCCTCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAACCCCAGCTCGTCTACTGATTCTCAGCTTTTCTAATAAGACTTGTCACTTACTAGCCTTAAACTaGTGCCAGGGGCTTAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: KQTPARLLILSFSNKTCHLLALN*CQGLSN Trigger: GTTGCTAAGCCCCTGGCACAAGTTTAAGGCTAGTAA...GTGACAAGTCTTATTAGAAAAGCTGAGAATCAGTAGACGAGCTGGGGTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR TCA 72 bp | TACACTGTAATGCCACAGCTCTTTTCAAACACTTCATaGGGACACATGTGTACTTCTCTACTTCTTTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: YTVMPQLFSNTS*GHMCTSLLLSP Trigger: GGGGGAAAGAAGTAGAGAAGTACACATGTGTCCTCATGAAGTGTTTGAAAAGAGCTGTGGCATTACAGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR GCA 72 bp | ACTTCATCCTCCCTAGTTTTCTGCACTAGTTACAGGTaGCTAGGTCACATCAAAGACCTAAAACACAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: TSSSLVFCTSYR*LGHIKDLKHRC Trigger: ACATCTGTGTTTTAGGTCTTTGATGTGACCTAGGCACCTGTAACTAGTGCAGAAAACTAGGGAGGATGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR GCA 72 bp | TTTATTAACAAACATGACTCCAACATAAACAAAGCCTaGCTCTCTCCACGTGAACTGGAACTGTACTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FINKHDSNINKA*LSPRELELYSS Trigger: AGAAGAGTACAGTTCCAGTTCACGTGGAGAGAGGCAGGCTTTGTTTATGTTGGAGTCATGTTTGTTAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR TCA 72 bp | AATCAAATCTCATTTAGATTAAGTACCTGGATTCTCTaGTTAGTTCTCGAGGCTGACATTTTTCACTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NQISFRLSTWIL*LVLEADIFHWP Trigger: AGGCCAGTGAAAAATGTCAGCCTCGAGAACTAATCAGAGAATCCAGGTACTTAATCTAAATGAGATTTGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| 3UTR TCA 72 bp | TTGCATTTTATACTTAATGACAATGATTTAAACAACTaGAAACATCCAATCCCATCTACCCCACGTAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LHFILNDNDLNN*KHPIPSTPRSL Trigger: GAGGCTACGTGGGGTAGATGGGATTGGATGTTTTCAGTTGTTTAAATCATTGTCATTAAGTATAAAATGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCAATCACCTGGGTTCCCTCTGTCCATCAAGTCTTCCCAGCCTCCAGCCACTTCTGGGATCCTTTaGATGGTGGCCCAGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSQSPGFPLSIKSSQPPATSGIL*MVAQRN Trigger: GTTCCTCTGGGCCACCATCCAAAGGATCCCAGAAGT...GGCTGGAGGCTGGGAAGACTTGATGGACAGAGGGAACCCAGGTGATTGGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGACACGGTAAACAGACACTGTACAAGCCCTGTGTCAGGCACTGGGCCACTCTGGGATCCTTTGGATaGTGGCCCAGAGGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VRHGKQTLYKPCVRHWATLGSFG*WPRGTH Trigger: ATGAGTTCCTCTGGGCCACCATCCAAAGGATCCCAG...AGTGGCCCAGTGCCTGACACAGGGCTTGTACAGTGTCTGTTTACCGTGTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGACACGGTAAACAGACACTGTACAAGCCCTGTGTCAGGCACTGGGCCACTGCAAAAAGGTGGTGTTaGCGCAGCATCCAGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRHGKQTLYKPCVRHWATAKRWC*RSIQLK Trigger: CTTGAGCTGGATGCTGCGCCAACACCACCTTTTTGC...AGTGGCCCAGTGCCTGACACAGGGCTTGTACAGTGTCTGTTTACCGTGTCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR CAA 72 bp | CGTTCCTCCAGTATAAAGCAAACTGGGACAGATATGTaGACCACCGGTGACCCCAGGCTGGGGTTCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSSSIKQTGTDM*TTGDPRLGFLL Trigger: AAGCAGGAACCCCAGCCTGGGGTCACCGGTGGTCAACATATCTGTCCCAGTTTGCTTTATACTGGAGGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACATTATCAAAGCAGGATaGGATGCCCTGCACCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFPASSHPNSVLTFPLEHIIKAG*DALHRG Trigger: GCCGCGGTGCAGGGCATCGCATCCTGCTTTGATAAT...GTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGATTATCAAAGCAGGATaGGATGCCCTGCACCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: DRKTLKSSPQGGPHRRDGIIKAG*DALHRG Trigger: GCCGCGGTGCAGGGCATCGCATCCTGCTTTGATAAT...CCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCAATCACCTGGGTTCCCTCTGTCCATCAAGTCTTCCCAGCCTCCAGCCGGGCGCTTCTTGAATTaGACTGTTAGTATCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQSPGFPLSIKSSQPPAGRFLN*TVSISS Trigger: GCTTGAGATACTAACAGTGCAATTCAAGAAGCGCCC...GGCTGGAGGCTGGGAAGACTTGATGGACAGAGGGAACCCAGGTGATTGGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGATTATCAAAGCAGGATaGGATGCCCTGCACCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PASSHPNSVLTFPLEHLRIIKAG*DALHRG Trigger: GCCGCGGTGCAGGGCATCGCATCCTGCTTTGATAAT...CCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCAATCACCTGGGTTCCCTCTGTCCATCAAGTCTTCCCAGCCTCCAGCCCACTCTCCAACTGGCTaGCCACAAAGACATTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSQSPGFPLSIKSSQPPAHSPTG*PQRHYQ Trigger: TTGATAATGTCTTTGTGGCCAGCCAGTTGGAGAGTG...GGCTGGAGGCTGGGAAGACTTGATGGACAGAGGGAACCCAGGTGATTGGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGCTGGGATCCTTTGGATaGTGGCCCAGAGGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DRKTLKSSPQGGPHRRDGLGSFG*WPRGTH Trigger: ATGAGTTCCTCTGGGCCACCATCCAAAGGATCCCAG...CCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACCTGGGATCCTTTGGATaGTGGCCCAGAGGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFPASSHPNSVLTFPLEHLGSFG*WPRGTH Trigger: ATGAGTTCCTCTGGGCCACCATCCAAAGGATCCCAG...GTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGGCAAAAAGGTGGTGTTaGCGCAGCATCCAGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DRKTLKSSPQGGPHRRDGAKRWC*RSIQLK Trigger: CTTGAGCTGGATGCTGCGCCAACACCACCTTTTTGC...CCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACGCAAAAAGGTGGTGTTaGCGCAGCATCCAGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VFPASSHPNSVLTFPLEHAKRWC*RSIQLK Trigger: CTTGAGCTGGATGCTGCGCCAACACCACCTTTTTGC...GTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | CTGTACAAGCCCTGTGTCAGGCACTGGGCCACTACAGCATCAGACATGGTTCAATTTCAGTGGGGGCGGTaGTTTGACTATTCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYKPCVRHWATTASDMVQFQWGR*FDYSSV Trigger: AACACTGGAATAGTCAAAGCACCGCCCCCACTGAAA...TTGAACCATGTCTGATGCTGTAGTGGCCCAGTGCCTGACACAGGGCTTGTACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGACTGGGATCCTTTGGATaGTGGCCCAGAGGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRLGSFG*WPRGTH Trigger: ATGAGTTCCTCTGGGCCACCATCCAAAGGATCCCAG...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAACTTCTGGGATCCTTTaGATGGTGGCCCAGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRTSGIL*MVAQRN Trigger: GTTCCTCTGGGCCACCATCCAAAGGATCCCAGAAGT...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGGCACCGTTGGAAACATaGCCTTCGAAGTACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PASSHPNSVLTFPLEHLRAPLET*PSKYCH Trigger: GTGGCAGTACTTCGAAGGCCATGTTTCCAACGGTGC...CCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGAAGGCACCGTTGGAAACATaGCCTTCGAAGTACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKTLKSSPQGGPHRRDGKAPLET*PSKYCH Trigger: GTGGCAGTACTTCGAAGGCCATGTTTCCAACGGTGC...CTTCCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGCACCGTTGGAAACATaGCCTTCGAAGTACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRAPLET*PSKYCH Trigger: GTGGCAGTACTTCGAAGGCCATGTTTCCAACGGTGC...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCAATCACCTGGGTTCCCTCTGTCCATCAAGTCTTCCCAGCCTCCAGCCAATGGCATTCATGTCTaGCAAGTCATACTTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQSPGFPLSIKSSQPPANGIHV*QVILVA Trigger: AGCAACAAGTATGACTTGTCAGACATGAATGCCATT...GGCTGGAGGCTGGGAAGACTTGATGGACAGAGGGAACCCAGGTGATTGGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGACACGGTAAACAGACACTGTACAAGCCCTGTGTCAGGCACTGGGCCACTATCTCTCTTCCTTGTTaGGAGGCATCTTCTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VRHGKQTLYKPCVRHWATISLPC*EASSQF Trigger: AAACTGAGAAGATGCCTCCCAACAAGGAAGAGAGAT...AGTGGCCCAGTGCCTGACACAGGGCTTGTACAGTGTCTGTTTACCGTGTCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR CCA 90 bp | GAGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAGCAAAAAGGTGGTGTTaGCGCAGCATCCAGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EDTCVLLYFFPPHQGHKRAKRWC*RSIQLK Trigger: CTTGAGCTGGATGCTGCGCCAACACCACCTTTTTGC...TCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR CAA 72 bp | AGTTCTTGTTATCTTGCCCAGCCTTGCCACTATCACTaGAGCTTAAACAATCCCCCTGCTTCACAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCYLAQPCHYH*SLNNPPASQAG Trigger: CCCTGCCTGTGAAGCAGGGGGATTGTTTAAGCTCAAGTGATAGTGGCAAGGCTGGGCAAGATAACAAGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGACACGGTAAACAGACACTGTACAAGCCCTGTGTCAGGCACTGGGCCACTAACCACAATGGAATATaGAATTGGAAAGCCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRHGKQTLYKPCVRHWATNHNGI*NWKAYL Trigger: GAGGTAGGCTTTCCAATTGCATATTCCATTGTGGTT...AGTGGCCCAGTGCCTGACACAGGGCTTGTACAGTGTCTGTTTACCGTGTCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGAAGTTTCAGTGGGGGCGGTaGTTTGACTATTCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKTLKSSPQGGPHRRDGKFQWGR*FDYSSV Trigger: AACACTGGAATAGTCAAAGCACCGCCCCCACTGAAA...CTTCCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGTTTCAGTGGGGGCGGTaGTTTGACTATTCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PASSHPNSVLTFPLEHLRFQWGR*FDYSSV Trigger: AACACTGGAATAGTCAAAGCACCGCCCCCACTGAAA...CCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGCCACGAAGTAGGCACTaGCTGAAAAGAGAGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PASSHPNSVLTFPLEHLRPRSRH*LKREEF Trigger: AAACTCCTCTCTTTTCAGGCAGTGCCTACTTCGTGG...CCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGAAGCCACGAAGTAGGCACTaGCTGAAAAGAGAGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKTLKSSPQGGPHRRDGKPRSRH*LKREEF Trigger: AAACTCCTCTCTTTTCAGGCAGTGCCTACTTCGTGG...CTTCCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGACCGAGCCAATTACTAGCCTTAAACTTGTGCCAGGGGCTTAGCAACGGCAATGGCATTCATGTCTaGCAAGTCATACTTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGPSQLLALNLCQGLSNGNGIHV*QVILVA Trigger: AGCAACAAGTATGACTTGTCAGACATGAATGCCATT...GCCGTTGCTAAGCCCCTGGCACAAGTTTAAGGCTAGTAATTGGCTCGGTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGGGCGCTTCTTGAATTaGACTGTTAGTATCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRGRFLN*TVSISS Trigger: GCTTGAGATACTAACAGTGCAATTCAAGAAGCGCCC...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | AACCAATCCCCTGCATTGGAGAGGAGAGACAGAACTGAAGAAACCCTAGACAGTTTTCAGTGGGGGCGGTaGTTTGACTATTCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NQSPALERRDRTEETLDSFQWGR*FDYSSV Trigger: AACACTGGAATAGTCAAAGCACCGCCCCCACTGAAA...ACTGTCTAGGGTTTCTTCAGTTCTGTCTCTCCTCTCCAATGCAGGGGATTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACACAAGTCATACTTGTTaGTTGAGGGGAAAGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFPASSHPNSVLTFPLEHTSHTC*LRGKNQ Trigger: CTGGTTCTTTCCCCTCAAGCAACAAGTATGACTTGT...GTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | TCCATCAAGTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCACAAGTCATACTTGTTaGTTGAGGGGAAAGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIKSSQPPAILTQSSHFLTSHTC*LRGKNQ Trigger: CTGGTTCTTTCCCCTCAAGCAACAAGTATGACTTGT...GAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGACTTGATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTCTCCAACTGGCTaGCCACAAAGACATTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVFPASSHPNSVLTFPLEHSPTG*PQRHYQ Trigger: TTGATAATGTCTTTGTGGCCAGCCAGTTGGAGAGTG...TTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGACACTCTCCAACTGGCTaGCCACAAAGACATTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRHSPTG*PQRHYQ Trigger: TTGATAATGTCTTTGTGGCCAGCCAGTTGGAGAGTG...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCAAGTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCATCTCTCTTCCTTGTTaGGAGGCATCTTCTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIKSSQPPAILTQSSHFLISLPC*EASSQF Trigger: AAACTGAGAAGATGCCTCCCAACAAGGAAGAGAGAT...GAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGACTTGATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | AGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTACTTCTGGGATCCTTTaGATGGTGGCCCAGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SHPNSVLTFPLEHLRYQPTSGIL*MVAQRN Trigger: GTTCCTCTGGGCCACCATCCAAAGGATCCCAGAAGT...AGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | TCCATCAAGTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCCCATGTCAAACTTATTaGCAAAAAGGTGGTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIKSSQPPAILTQSSHFLPCQTY*QKGGVG Trigger: GCCAACACCACCTTTTTGCCAATAAGTTTGACATGG...GAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGACTTGATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGCCATGTCAAACTTATTaGCAAAAAGGTGGTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DRKTLKSSPQGGPHRRDGPCQTY*QKGGVG Trigger: GCCAACACCACCTTTTTGCCAATAAGTTTGACATGG...CCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | CCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTCTCCTGTAACTATATTCATTATCAAAGCAGGATaGGATGCCCTGCACCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHISSRTLKVSASPVTIFIIKAG*DALHRG Trigger: GCCGCGGTGCAGGGCATCGCATCCTGCTTTGATAAT...GAATATAGTTACAGGAGAGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACCAAGTACTTCCAGTTTaGATTCATTCTGTACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFPASSHPNSVLTFPLEHQVLPV*IHSVQV Trigger: GACCTGTACAGAATGAATGCAAACTGGAAGTACTTG...GTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGAAGACAAGTCATACTTGTTaGTTGAGGGGAAAGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKTLKSSPQGGPHRRDGKTSHTC*LRGKNQ Trigger: CTGGTTCTTTCCCCTCAAGCAACAAGTATGACTTGT...CTTCCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | AACCAATCCCCTGCATTGGAGAGGAGAGACAGAACTGAAGAAACCCTAGACAGTACAACACTCTCCAACTaGCTGGCCACAAAGACATTA | + |
|
Preference number: 4 (lower is better) Translates to: NQSPALERRDRTEETLDSTTLSN*LATKTL Trigger: TAATGTCTTTGTGGCCAGCCAGTTGGAGAGTGTTGT...ACTGTCTAGGGTTTCTTCAGTTCTGTCTCTCCTCTCCAATGCAGGGGATTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAATCTCTCTTCCTTGTTaGGAGGCATCTTCTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRISLPC*EASSQF Trigger: AAACTGAGAAGATGCCTCCCAACAAGGAAGAGAGAT...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGCATCACCATCATTGCTGGTGGCCCATGGCCAACACATTTCTATTGGTCCATGTCAAACTTATTaGCAAAAAGGTGGTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAASPSLLVAHGQHISIGPCQTY*QKGGVG Trigger: GCCAACACCACCTTTTTGCCAATAAGTTTGACATGG...ACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGCAGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAAATGGCATTCATGTCTaGCAAGTCATACTTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRNGIHV*QVILVA Trigger: AGCAACAAGTATGACTTGTCAGACATGAATGCCATT...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGAAGCAAGTACTTCCAGTTTaGATTCATTCTGTACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKTLKSSPQGGPHRRDGKQVLPV*IHSVQV Trigger: GACCTGTACAGAATGAATGCAAACTGGAAGTACTTG...CTTCCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGCAAGTACTTCCAGTTTaGATTCATTCTGTACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PASSHPNSVLTFPLEHLRQVLPV*IHSVQV Trigger: GACCTGTACAGAATGAATGCAAACTGGAAGTACTTG...CCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | AGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTCCACGAAGTAGGCACTaGCTGAAAAGAGAGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHPNSVLTFPLEHLRYQPPRSRH*LKREEF Trigger: AAACTCCTCTCTTTTCAGGCAGTGCCTACTTCGTGG...AGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | AGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAGACAAGTCATACTTGTTaGTTGAGGGGAAAGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTHVYFSTSFPLIKATRETSHTC*LRGKNQ Trigger: CTGGTTCTTTCCCCTCAAGCAACAAGTATGACTTGT...CTCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAACCCCAGCTCGTCTACTGATTCTCAGCTTTTCTAATAAGACTTGTCACGCACCGTTGGAAACATaGCCTTCGAAGTACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQTPARLLILSFSNKTCHAPLET*PSKYCH Trigger: GTGGCAGTACTTCGAAGGCCATGTTTCCAACGGTGC...GTGACAAGTCTTATTAGAAAAGCTGAGAATCAGTAGACGAGCTGGGGTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| 3UTR CAA 72 bp | AGAATGCCACCACCTGAGACACAATTGGATCATTTCTaGGGACCGAGCCAATTACTAGCCTTAAACTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RMPPPETQLDHF*GPSQLLALNLC Trigger: GCACAAGTTTAAGGCTAGTAATTGGCTCGGTCCCAAGAAATGATCCAATTGTGTCTCAGGTGGTGGCATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAGAGTTCTTGTTATCTTGCCCAGCCTTGCCACTATCACTTGAGCTTAAACGGGCGCTTCTTGAATTaGACTGTTAGTATCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKSSCYLAQPCHYHLSLNGRFLN*TVSISS Trigger: GCTTGAGATACTAACAGTGCAATTCAAGAAGCGCCC...GTTTAAGCTCAAGTGATAGTGGCAAGGCTGGGCAAGATAACAAGAACTCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR GCA 90 bp | AGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTGGGCGCTTCTTGAATTaGACTGTTAGTATCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHPNSVLTFPLEHLRYQPGRFLN*TVSISS Trigger: GCTTGAGATACTAACAGTGCAATTCAAGAAGCGCCC...AGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR GCA 90 bp | AACCAATCCCCTGCATTGGAGAGGAGAGACAGAACTGAAGAAACCCTAGACAGTCAAGTACTTCCAGTTTaGATTCATTCTGTACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NQSPALERRDRTEETLDSQVLPV*IHSVQV Trigger: GACCTGTACAGAATGAATGCAAACTGGAAGTACTTG...ACTGTCTAGGGTTTCTTCAGTTCTGTCTCTCCTCTCCAATGCAGGGGATTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR CCA 90 bp | AGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTCCATGTCAAACTTATTaGCAAAAAGGTGGTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHPNSVLTFPLEHLRYQPPCQTY*QKGGVG Trigger: GCCAACACCACCTTTTTGCCAATAAGTTTGACATGG...AGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | CCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTCTCCTGTAACTATATTCCACTCTCCAACTGGCTaGCCACAAAGACATTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PHISSRTLKVSASPVTIFHSPTG*PQRHYQ Trigger: TTGATAATGTCTTTGTGGCCAGCCAGTTGGAGAGTG...GAATATAGTTACAGGAGAGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CCA 90 bp | CCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTCTCCTGTAACTATATTCATCTCTCTTCCTTGTTaGGAGGCATCTTCTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHISSRTLKVSASPVTIFISLPC*EASSQF Trigger: AAACTGAGAAGATGCCTCCCAACAAGGAAGAGAGAT...GAATATAGTTACAGGAGAGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGGACTTCTGGGATCCTTaGGATGGTGGCCCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DRKTLKSSPQGGPHRRDGDFWDP*DGGPEE Trigger: TTCCTCTGGGCCACCATCCAAAGGATCCCAGAAGTC...CCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGGGCAAAAAGGTGGTGTaGGCGCAGCATCCAGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DRKTLKSSPQGGPHRRDGGKKVV*AQHPAQ Trigger: TTGAGCTGGATGCTGCGCCAACACCACCTTTTTGCC...CCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGTCCCCTGTGGAGCACTaGAGCTTCCTGACAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DRKTLKSSPQGGPHRRDGSPVEH*SFLTIS Trigger: GGAAATTGTCAGGAAGCTCAAGTGCTCCACAGGGGA...CCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGAAGGACTTCTGGGATCCTTaGGATGGTGGCCCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RKTLKSSPQGGPHRRDGKDFWDP*DGGPEE Trigger: TTCCTCTGGGCCACCATCCAAAGGATCCCAGAAGTC...CTTCCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGACTTCTGGGATCCTTaGGATGGTGGCCCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRDFWDP*DGGPEE Trigger: TTCCTCTGGGCCACCATCCAAAGGATCCCAGAAGTC...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAAGGCAAAAAGGTGGTGTaGGCGCAGCATCCAGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QVFPASSHPNSVLTFPLEGKKVV*AQHPAQ Trigger: TTGAGCTGGATGCTGCGCCAACACCACCTTTTTGCC...TTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGGCAAAAAGGTGGTGTaGGCGCAGCATCCAGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRGKKVV*AQHPAQ Trigger: TTGAGCTGGATGCTGCGCCAACACCACCTTTTTGCC...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGACGCCTCGGGCGCTTCTaGAATTGCACTGTTAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRRLGRF*NCTVSI Trigger: GATACTAACAGTGCAATTCAAGAAGCGCCCGAGGCG...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGAAGTCCCCTGTGGAGCACTaGAGCTTCCTGACAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKTLKSSPQGGPHRRDGKSPVEH*SFLTIS Trigger: GGAAATTGTCAGGAAGCTCAAGTGCTCCACAGGGGA...CTTCCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
||
| CDS-3UTR CAA 90 bp | GCATCACCATCATTGCTGGTGGCCCATGGCCAACACATTTCTATTGGTCCAAAAGACTTCTGGGATCCTTaGGATGGTGGCCCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASPSLLVAHGQHISIGPKDFWDP*DGGPEE Trigger: TTCCTCTGGGCCACCATCCAAAGGATCCCAGAAGTC...TTTTGGACCAATAGAAATGTGTTGGCCATGGGCCACCAGCAATGATGGTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR CAA 90 bp | AACCAATCCCCTGCATTGGAGAGGAGAGACAGAACTGAAGAAACCCTAGACAGTGGCAAAAAGGTGGTGTaGGCGCAGCATCCAGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NQSPALERRDRTEETLDSGKKVV*AQHPAQ Trigger: TTGAGCTGGATGCTGCGCCAACACCACCTTTTTGCC...ACTGTCTAGGGTTTCTTCAGTTCTGTCTCTCCTCTCCAATGCAGGGGATTGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
||
| CDS-3UTR CAA 90 bp | AACCAATCCCCTGCATTGGAGAGGAGAGACAGAACTGAAGAAACCCTAGACAGTTCCCCTGTGGAGCACTaGAGCTTCCTGACAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NQSPALERRDRTEETLDSSPVEH*SFLTIS Trigger: GGAAATTGTCAGGAAGCTCAAGTGCTCCACAGGGGA...ACTGTCTAGGGTTTCTTCAGTTCTGTCTCTCCTCTCCAATGCAGGGGATTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| CDS-3UTR CAA 90 bp | CTGTACAAGCCCTGTGTCAGGCACTGGGCCACTACAGCATCAGACATGGTTCAAGACAAGTCATACTTGTaGCTTGAGGGGAAAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: LYKPCVRHWATTASDMVQDKSYL*LEGKEP Trigger: TGGTTCTTTCCCCTCAAGCAACAAGTATGACTTGTC...TTGAACCATGTCTGATGCTGTAGTGGCCCAGTGCCTGACACAGGGCTTGTACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGAAGCATCTCTCTTCCTTGTaGGGAGGCATCTTCTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RKTLKSSPQGGPHRRDGKHLSSL*GGIFSV Trigger: AACTGAGAAGATGCCTCCCAACAAGGAAGAGAGATG...CTTCCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGACATCTCTCTTCCTTGTaGGGAGGCATCTTCTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRHLSSL*GGIFSV Trigger: AACTGAGAAGATGCCTCCCAACAAGGAAGAGAGATG...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | AGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTCGCCTCGGGCGCTTCTaGAATTGCACTGTTAGTATC | + |
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Preference number: 5 (lower is better) Translates to: SHPNSVLTFPLEHLRYQPRLGRF*NCTVSI Trigger: GATACTAACAGTGCAATTCAAGAAGCGCCCGAGGCG...AGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | AGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTTCCCCTGTGGAGCACTaGAGCTTCCTGACAATTTCC | + |
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Preference number: 5 (lower is better) Translates to: SHPNSVLTFPLEHLRYQPSPVEH*SFLTIS Trigger: GGAAATTGTCAGGAAGCTCAAGTGCTCCACAGGGGA...AGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | AGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAGCATCTCTCTTCCTTGTaGGGAGGCATCTTCTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RTHVYFSTSFPLIKATREHLSSL*GGIFSV Trigger: AACTGAGAAGATGCCTCCCAACAAGGAAGAGAGATG...CTCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGAAGGACAAGTCATACTTGTaGCTTGAGGGGAAAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: RKTLKSSPQGGPHRRDGKDKSYL*LEGKEP Trigger: TGGTTCTTTCCCCTCAAGCAACAAGTATGACTTGTC...CTTCCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | GACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGTCCATGTCAAACTTATaGGCAAAAAGGTGGTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: DRKTLKSSPQGGPHRRDGSMSNL*AKRWCW Trigger: CCAACACCACCTTTTTGCCAATAAGTTTGACATGGA...CCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | GTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTCACCCTGTAAAATCTaGGTGCAATTAACATTGCTG | + |
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Preference number: 5 (lower is better) Translates to: VFPASSHPNSVLTFPLEHSPCKI*VQLTLL Trigger: CAGCAATGTTAATTGCACCAAGATTTTACAGGGTGA...GTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | GACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGTCAAGTACTTCCAGTTaGCATTCATTCTGTACAGGT | + |
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Preference number: 5 (lower is better) Translates to: DRKTLKSSPQGGPHRRDGSSTSS*HSFCTG Trigger: ACCTGTACAGAATGAATGCAAACTGGAAGTACTTGA...CCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | GTCTTCCCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTCAAGTACTTCCAGTTaGCATTCATTCTGTACAGGT | + |
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Preference number: 5 (lower is better) Translates to: VFPASSHPNSVLTFPLEHSSTSS*HSFCTG Trigger: ACCTGTACAGAATGAATGCAAACTGGAAGTACTTGA...GTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGGGAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | CCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGTCCATGTCAAACTTATaGGCAAAAAGGTGGTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: PASSHPNSVLTFPLEHLRSMSNL*AKRWCW Trigger: CCAACACCACCTTTTTGCCAATAAGTTTGACATGGA...CCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | AGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGAGATGGGAAGTCACCCTGTAAAATCTaGGTGCAATTAACATTGCTG | + |
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Preference number: 5 (lower is better) Translates to: RKTLKSSPQGGPHRRDGKSPCKI*VQLTLL Trigger: CAGCAATGTTAATTGCACCAAGATTTTACAGGGTGA...CTTCCCATCTCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | TTCCCTGACAGGAAGACTTTAAAGTCATCACCCCAAGGAGGACCCCATAGGAGATCACCCTGTAAAATCTaGGTGCAATTAACATTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FPDRKTLKSSPQGGPHRRSPCKI*VQLTLL Trigger: CAGCAATGTTAATTGCACCAAGATTTTACAGGGTGA...TCTCCTATGGGGTCCTCCTTGGGGTGATGACTTTAAAGTCTTCCTGTCAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | CCAGCCTCCAGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGTCAAGTACTTCCAGTTaGCATTCATTCTGTACAGGT | + |
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Preference number: 5 (lower is better) Translates to: PASSHPNSVLTFPLEHLRSSTSS*HSFCTG Trigger: ACCTGTACAGAATGAATGCAAACTGGAAGTACTTGA...CCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCTGGAGGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | AGGACACATGTGTACTTCTCTACTTCTTTCCCCCTCATCAAGGCCACAAGAGAGTCAAGTACTTCCAGTTaGCATTCATTCTGTACAGGT | + |
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Preference number: 5 (lower is better) Translates to: RTHVYFSTSFPLIKATRESSTSS*HSFCTG Trigger: ACCTGTACAGAATGAATGCAAACTGGAAGTACTTGA...CTCTCTTGTGGCCTTGATGAGGGGGAAAGAAGTAGAGAAGTACACATGTGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| CDS-3UTR CAA 90 bp | AGCCATCCTAACTCAGTCCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTGACAAGTCATACTTGTaGCTTGAGGGGAAAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: SHPNSVLTFPLEHLRYQPDKSYL*LEGKEP Trigger: TGGTTCTTTCCCCTCAAGCAACAAGTATGACTTGTC...AGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGGACTGAGTTAGGATGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | CCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTCTCCTGTAACTATATTCCATCTCTCTTCCTTGTaGGGAGGCATCTTCTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PHISSRTLKVSASPVTIFHLSSL*GGIFSV Trigger: AACTGAGAAGATGCCTCCCAACAAGGAAGAGAGATG...GAATATAGTTACAGGAGAGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | CCTCACATTTCCTCTAGAACACTTAAGGTATCAGCCTCTCCTGTAACTATATTCTCCATGTCAAACTTATaGGCAAAAAGGTGGTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: PHISSRTLKVSASPVTIFSMSNL*AKRWCW Trigger: CCAACACCACCTTTTTGCCAATAAGTTTGACATGGA...GAATATAGTTACAGGAGAGGCTGATACCTTAAGTGTTCTAGAGGAAATGTGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000236139.2 |
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| CDS-3UTR CAA 90 bp | TTGGACAAATCCACTGGACAAAAGAAAGAAATCAGAAGCCAGTATAGAGGGTATTCCATGTCAAACTTATaGGCAAAAAGGTGGTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LDKSTGQKKEIRSQYRGYSMSNL*AKRWCW Trigger: CCAACACCACCTTTTTGCCAATAAGTTTGACATGGA...ATACCCTCTATACTGGCTTCTGATTTCTTTCTTTTGTCCAGTGGATTTGTCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 |
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| CDS GCA 72 bp | CTCCGAAGACGCACACAGAGCGCACGTGGACTCCACTaGACGGTGGATAAGGGGCACCGTTGGAAACATGGC | + |
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Preference number: 6 (lower is better) Translates to: LRRRTQSARGLH*TVDKGHRWKHG Trigger: GCCATGTTTCCAACGGTGCCCCTTATCCACCGTGCAGTGGAGTCCACGTGCGCTCTGTGTGCGTCTTCGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS GCA 72 bp | GGCTGGCCACAAAGACATTATCAAAGCAGGATGCGATaGCCTGCACCGCGGCTAAAAAGGATTCCTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GWPQRHYQSRMR*PAPRLKRIPLL Trigger: AAGCAGAGGAATCCTTTTTAGCCGCGGTGCAGGGCATCGCATCCTGCTTTGATAATGTCTTTGTGGCCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS GCA 72 bp | GCCACAAAGACATTATCAAAGCAGGATGCGATGCCCTaGACCGCGGCTAAAAAGGATTCCTCTGCTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ATKTLSKQDAMP*TAAKKDSSAFL Trigger: CAGAAAAGCAGAGGAATCCTTTTTAGCCGCGGTGCAGGGCATCGCATCCTGCTTTGATAATGTCTTTGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS CAA 72 bp | CCTACCTCTTCTTTAGTAAGGGGCTCCACAATATATTaGCGTGTCCTGATGAAAGAGGCACAGTCACGGGTC | + |
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Preference number: 6 (lower is better) Translates to: PTSSLVRGSTIY*RVLMKEAQSRV Trigger: GACCCGTGACTGTGCCTCTTTCATCAGGACACGCAAATATATTGTGGAGCCCCTTACTAAAGAAGAGGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS TCA 72 bp | TTATATAGTCATGGGGTGTCCGCCTCGGGCGCTTCTTaGATTGCACTGTTAGTATCTCAAGCTTCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LYSHGVSASGAS*IALLVSQASPS Trigger: AGAAGGTGAAGCTTGAGATACTAACAGTGCAATTCAAGAAGCGCCCGAGGCGGACACCCCATGACTATATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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| CDS CAA 90 bp | ATTGGAAAGCCTACCTCTTCTTTAGTAAGGGGCTCCACAATATATTaGCGTGTCCTGATGAAAGAGGCACAGTCACGGGTCATGTTTATA | + |
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Preference number: 6 (lower is better) Translates to: IGKPTSSLVRGSTIY*RVLMKEAQSRVMFI Trigger: TATAAACATGACCCGTGACTGTGCCTCTTTCATCAGGACACGCAAATATATTGTGGAGCCCCTTACTAAAGAAGAGGTAGGCTTTCCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000169897.2 ENSMUST00000174236.8 ENSMUST00000235184.2 ENSMUST00000236139.2 |
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