RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GCN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041638

Ensembl transcript IDs: ENSMUST00000064454.12

Found 590 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCATCCGGGCTGAGCCGAGTCGGGCTCCCCTTGCTGCCGCTCGCTaGGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATAAGG +
Preference number: 1 (lower is better)
Translates to: SIRAEPSRAPLAAAR*GWCARFSFSSLEIR
Trigger: CCTTATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCAAGGGGAGCCCGACTCGGCTCAGCCCGGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR TCA 90 bp TTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTaGGGAGGAGGAGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGG +
Preference number: 1 (lower is better)
Translates to: FIKPPSNGLYPKPRS*GGGGLGSLFSRQAR
Trigger: CCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCTCCTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR CCA 90 bp GGGAGGAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTaGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCA +
Preference number: 1 (lower is better)
Translates to: GRRRSSVVCGLDLRL*LWSLDVLKYFLGMP
Trigger: TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR CCA 90 bp AGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTaGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCATCTCCT +
Preference number: 1 (lower is better)
Translates to: RRSSVVCGLDLRLWL*SLDVLKYFLGMPSP
Trigger: AGGAGATGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR-3UTR CCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGACGAGGGGCAGCGTaGCTGCGGCTGGCGGGACCA +
Preference number: 2 (lower is better)
Translates to: KPGAASGSTDAPLNALRHRRGAA*LRLAGP
Trigger: TGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCT...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR-3UTR TCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACGGGAATGCCATCTCCTaGGCTCCCCCTTGGAATAAA +
Preference number: 2 (lower is better)
Translates to: KPGAASGSTDAPLNALRHGNAIS*APPWNK
Trigger: TTTATTCCAAGGGGGAGCTCAGGAGATGGCATTCCC...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR-3UTR TCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTTTGGCTCTGGTCGCTTaGTGTACTAAAATACTTTCT +
Preference number: 2 (lower is better)
Translates to: GAASGSTDAPLNALRHRPLALVA*CTKILS
Trigger: AGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAA...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR-3UTR GCA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGTCGCTGAGGGTGGTGTaGACGCTTCTCTTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: PLLNLLRMACTPSPGAEESLRVV*TLLFLF
Trigger: GAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGA...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR-3UTR CCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCGAGGAGGAGGAGGACTaGGCAGCCTCTTCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPEEEED*AASSPD
Trigger: GTCTGGAGAAGAGGCTGCCCAGTCCTCCTCCTCCTC...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR CAA 90 bp GATAAGGGCAAGAGAGGGAGGAGGCGATCTTCAGTTGTGTGTGGGTaGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATAC +
Preference number: 2 (lower is better)
Translates to: DKGKRGRRRSSVVCG*DLRLWLWSLDVLKY
Trigger: GTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTCCTCCCTCTCTTGCCCTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR TCA 72 bp CCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTaGGGAGGAGGAGGACTGGGCAGCCTCTTCTCCAGA +
Preference number: 3 (lower is better)
Translates to: PPSNGLYPKPRS*GGGGLGSLFSR
Trigger: TCTGGAGAAGAGGCTGCCCAGTCCTCCTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR-3UTR CAA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTTCAGTTGTGTGTGGGTaGGATTTAAGGCTTTGGCTC +
Preference number: 3 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSSVVCG*DLRLWL
Trigger: GAGCCAAAGCCTTAAATCCAACCCACACACAACTGA...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
3UTR CCA 72 bp CGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTaGCTCTGGTCGCTTGATGTACTAAAATACTTTCTG +
Preference number: 3 (lower is better)
Translates to: RSSVVCGLDLRL*LWSLDVLKYFL
Trigger: CAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACGGATGCCCAGGCCCTTaGCCAGGCCCGCCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHGCPGP*PGPPAR
Trigger: ACGGGCTGGCGGGCCTGGTCAAGGGCCTGGGCATCC...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGGCGGTGGCCTCTGGCTaGGCCTCGGCCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQAAVASG*ASASCW
Trigger: CCAGCAGCTGGCCGAGGCCCAGCCAGAGGCCACCGC...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTATCGAGATGACCCGCTaGCCGGCACGCAGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPIEMTR*PARRAV
Trigger: CACCGCCCTGCGTGCCGGCCAGCGGGTCATCTCGAT...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCTCTGCTGGGCCTGCCTaGGCACATGCCAGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGSAGPA*AHARSG
Trigger: GCCGGACCTGGCATGTGCGCAGGCAGGCCCAGCAGA...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTCGTCCTCCCCGCTGCTaGTGGCACACAGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPRPPRC*WHTGQS
Trigger: TGACTGCCCTGTGTGCCAGCAGCAGCGGGGAGGACG...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTGAAGGCTGGAGAGCCTaGGGGGCAGCTGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPEGWRA*GAAARF
Trigger: GAAGCGGGCAGCTGCCCCCCAGGCTCTCCAGCCTTC...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGGCGACACCGCCCTCCTaGCAGCCACAGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQAATPPS*QPQAAP
Trigger: AGGAGCTGCCTGTGGCTGTCAGGAGGGCGGTGTCGC...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACGCCTGCCTGCGCACATaGCAGGTCCGGCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHACLRT*QVRLRS
Trigger: GCTCCTGAGCCGGACCTGGCATGTGCGCAGGCAGGC...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTCTTGGCGGTGGCCTCTaGCTGGGCCTCGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSLGGGL*LGLGQL
Trigger: CAGCTGGCCGAGGCCCAGCCAGAGGCCACCGCCAAG...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACTGGGGATGTCGCCCTTaGGCCCTGGCACCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHWGCRP*ALAPQR
Trigger: TCTCTGGGGTGCCAGGGCTCAAGGGCGACATCCCCA...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGGCTCAGGACTGCCAGTaGGGACCCCTTCCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQAAQDCQ*GPLPAA
Trigger: TGCTGCGGGAAGGGGTCCTCACTGGCAGTCCTGAGC...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCGGAAGGAGGCCAGCATaGACTGCAGGTAGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGGRRPA*TAGRRA
Trigger: GGCACGCCTACCTGCAGTGCATGCTGGCCTCCTTCC...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCACCTCCTCCTGCTCTaGGAAGGCACAGCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPHLLLL*EGTAVL
Trigger: GAGGACGGCTGTGCCTTCGCAGAGCAGGAGGAGGTG...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCGATGCACACGCCCTaGCTCTCGTCGCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPPMHTP*LSSLFC
Trigger: GCAGAAGAGCGACGAGAGGCAGGGCGTGTGCATCGG...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCATGATGGCCGCCGCCTaGCTCATGCCCACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGMMAAA*LMPTSG
Trigger: CCCTGAAGTGGGCATGAGGCAGGCGGCGGCCATCAT...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGTACCGTGCCACCGCCTaGGAAAGGGCTTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQAYRATA*ERASAP
Trigger: CGGGGCTGAAGCCCTTTCCCAGGCGGTGGCACGGTA...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTGCCTCGCGCACGTACTaGTTCCCATCCCCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPASRTY*FPSPKH
Trigger: GTGCTTTGGGGATGGGAACCAGTACGTGCGCGAGGC...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGCAGAGCCAATCTGCCTaGGGGCCTGCTGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQAQSQSA*GPAVQP
Trigger: AGGCTGGACAGCAGGCCCTCAGGCAGATTGGCTCTG...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCCAGCACCCGGGTATTaGCGGGTGGTGTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGPAPGY*RVVLSA
Trigger: AGCTGACAACACCACCCGTCAATACCCGGGTGCTGG...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACACTGTCTGCTGGGCCTaGCTGCGCACATGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHTVCWA*LRTCQV
Trigger: GACCTGGCATGTGCGCAGGCAGGCCCAGCAGACAGT...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACACGTCCACCTCCTCCTaGTCTGCGAAGGCACAGCCG +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHTSTSS*SAKAQP
Trigger: CGGCTGTGCCTTCGCAGAGCAGGAGGAGGTGGACGT...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGATAACCTCCGCTGCCTaGCGCTGGTACCGTGCCACC +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQAITSAA*RWYRAT
Trigger: GGTGGCACGGTACCAGCGGCAGGCAGCGGAGGTTAT...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTTGCACAGTACGCCATTaGCCCGAGCAGCTCTACGGA +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPCTVRH*PEQLYG
Trigger: TCCGTAGAGCTGCTCGGGGCAATGGCGTACTGTGCA...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGGGCCCCAAGAGCCTTTaGAGACACGGTGCGCACCTC +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQAGPKSL*RHGAHL
Trigger: GAGGTGCGCACCGTGTCTGCAAAGGCTCTTGGGGCC...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGTCGCGGACGTGGGGTaGGATGTCCACTTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GQPLLQTSQVESGRPESQVADVG*DVHFAG
Trigger: GCCAGCAAAGTGGACATCGCACCCCACGTCCGCGAC...CTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTTTGGCCATCTCCAGCTaGTCGTCTGGAGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPLAISS*SSGVPS
Trigger: GCTTGGGACTCCAGACGAGCAGCTGGAGATGGCCAA...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCATCCACAGCATGCTTGTaGGAGCCGCCCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPSTACL*EPPSTS
Trigger: GGAGGTGCTGGGCGGCTCCCACAAGCATGCTGTGGA...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTGCACAGCGTCGTAGCTaGCATCATTGGGTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPAQRRS*HHWVRP
Trigger: AGGACGCACCCAATGATGCCAGCTACGACGCTGTGC...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTGCTTGGGCACAATGTTaGGCAGGCAGGACGACAGCT +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPAWAQC*AGRTTA
Trigger: AGCTGTCGTCCTGCCTGCCCAACATTGTGCCCAAGC...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACGCTGCTCAAAGGTCTTaGCTGCCGCCTCCCGGACCT +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHAAQRS*LPPPGP
Trigger: AGGTCCGGGAGGCGGCAGCCAAGACCTTTGAGCAGC...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTGGCACCCCAGAGATaGCACACAGAGCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGLAPQR*HTELPA
Trigger: TGCAGGAAGCTCTGTGTGTCATCTCTGGGGTGCCAG...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGAGGCGCAGGGTCACATaGCTCACCAAGGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQARRRVT*LTKVPK
Trigger: CTTGGGCACCTTGGTGAGTCATGTGACCCTGCGCCT...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGAGGATCTGGGCCATCTaGTCCTCCTCCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQARIWAI*SSSSSL
Trigger: CAGCGAGGAGGAGGAGGAGCAGATGGCCCAGATCCT...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAACTGGCACATGGGGACTaGAGGGCAGCAAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: RTGQPLLQTSQVESGRPELAHGD*RAASST
Trigger: CGTGCTGCTTGCTGCCCTGCAGTCCCCATGTGCCAG...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAGGCCTGCCTCACGGCTaGCTCGTGATAGATCACGTC +
Preference number: 4 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPGLPHG*LVIDHV
Trigger: GACGTGATCTATCACGAGGCAGCCGTGAGGCAGGCC...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGCACGACTCCCCCATaGCCTTCACCATGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHSTTPP*PSPWPQ
Trigger: TTGGGGCCATGGTGAAGGGCATGGGGGAGTCGTGCT...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGCCGCCGCCTGCCTCATaGCCACTTCAGGGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: LLNLLRMACTPSPGAEEEPPPAS*PLQGCA
Trigger: CGCGCAGCCCTGAAGTGGGCATGAGGCAGGCGGCGG...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACCGTCATGGCCCAGCATaGTCAGCAGGAGCGAGACCA +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHRHGPA*SAGARP
Trigger: TGGTCTCGCTCCTGCTGAGCATGCTGGGCCATGACG...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGTGCAGGAGGTTCTTaGCGGTGGCCTCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTGQPLLQTSQVESGRPESAGGS*RWPLAG
Trigger: CCCAGCCAGAGGCCACCGCCAAGAACCTCCTGCACT...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAGAGGAGTCACTGCACTaGCGGGCCAGGTTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: RTGQPLLQTSQVESGRPEEESLH*RARLRS
Trigger: GCTTCGCAACCTGGCCCGCCAGTGCAGTGACTCCTC...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGCAGCCACAGACAGCTTaGAGAGCAGAAGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GQPLLQTSQVESGRPESQQPQTA*RAEGLR
Trigger: CCGCAGCCCTTCTGCTCTCCAAGCTGTCTGTGGCTG...CTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACTTCCGAACTGTCTGCTaGGCCTGCCTGCGCACATGC +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHFRTVC*ACLRTC
Trigger: GCATGTGCGCAGGCAGGCCCAGCAGACAGTTCGGAA...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTGGGGACGCCCTCAGCTaGGCATGGACAGTGAGGATC +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSGDALS*AWTVRI
Trigger: GATCCTCACTGTCCATGCCCAGCTGAGGGCGTCCCC...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTGAGGTGGCAGGCAGCTaGCCACAGACTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSEVAGS*PQTPGP
Trigger: AGGTCCAGGAGTCTGTGGCCAGCTGCCTGCCACCTC...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAATGCCTCACCACCAGCTaGGTGTCTGAGCGGCCCATG +
Preference number: 4 (lower is better)
Translates to: RTGQPLLQTSQVESGRPECLTTS*VSERPM
Trigger: CATGGGCCGCTCAGACACCCAGCTGGTGGTGAGGCA...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCCCTTCCCGCAGCACTaGAAGGATGGAGGTTACTCC +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGPFPQH*KDGGYS
Trigger: GGAGTAACCTCCATCCTTCCAGTGCTGCGGGAAGGG...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTCCAAGCCCAAGCCCTTaGCTGCTTCTTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPPSPSP*LLLPSA
Trigger: AGCAGAAGGAAGAAGCAGCCAAGGGCTTGGGCTTGG...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCCACGTCCAGGATCTTaGAGAGGGACTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGPRPGS*RGTGAA
Trigger: AGCTGCTCCAGTCCCTCTCCAAGATCCTGGACGTGG...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCATCAGAGCCTCCAGGCTaGCCACGTCCAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPSEPPG*PRPGSW
Trigger: CCAAGATCCTGGACGTGGCCAGCCTGGAGGCTCTGA...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCTTTGGAGCCAACCCCTaGAGACTGGAGAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGFGANP*RLERVQ
Trigger: CTGCACTCTCTCCAGTCTTCAGGGGTTGGCTCCAAA...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTGTTGGTGAGCCTGTaGGGGTGGTCAAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGLLVSL*GWSRKS
Trigger: GCTTTTCCTTGACCACCCTCACAGGCTCACCAACAG...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCACGGGTGGTGGGAGATaGTTAGCATCTCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGTGGGR*LASPEP
Trigger: TGGCTCAGGAGATGCTAATCATCTCCCACCACCCGT...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACGCTGGGCATGGACAGTaGGGATCTGAAGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHAGHGQ*GSEGSG
Trigger: CCCAGATCCTTCAGATCCTCACTGTCCATGCCCAGC...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCTGGCAGCAGTGAGTTaGCATTCTCCTTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPLAAVS*HSPSHG
Trigger: CCCATGGGAAGGAGAATGTCAACTCACTGCTGCCAG...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCAGCCTTCTGCACTTTaGCGTGGGAGTCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPQPSAL*RGSLSA
Trigger: TGCTGACAGACTCCCACGTCAAAGTGCAGAAGGCTG...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCACTTCTGGGTCTTCCGTaGTGGGTCTGTCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPLLGLP*WVCQGI
Trigger: GATGCCCTGACAGACCCATCACGGAAGACCCAGAAG...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCGACAGGGTCCAAGAGTaGAGCTTTCAGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGDRVQE*SFQARC
Trigger: ACACCTGGCCTGAAAGCTTCACTCTTGGACCCTGTC...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAACCTCAGGGCATCAGCTaGGGTCAGGCGGATCACCAA +
Preference number: 4 (lower is better)
Translates to: RTGQPLLQTSQVESGRPEPQGIS*GQADHQ
Trigger: TTGGTGATCCGCCTGACCTCAGCTGATGCCCTGAGG...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTTGCAGCATCTCCTTCTaGTTGCTGGTCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPCSISF*LLVSCT
Trigger: GGTACAGCTGACCAGCAAGCAGAAGGAGATGCTGCA...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAACCGCCTCCGGATTTGTaGCTCCTTGTCCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: RTGQPLLQTSQVESGRPEPPPDL*LLVHLG
Trigger: GCCCAGATGGACAAGGAGGCACAAATCCGGAGGCGG...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTCGCCCTTGCCCACCCTaGTGGGGATGGTGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSRPCPP*WGWCVY
Trigger: ATACACACACCATCCCCAGCAGGGTGGGCAAGGGCG...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATCATCTGGCTCGCCCTTaGCCACCCTGCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDHLARP*PPCWGW
Trigger: CCATCCCCAGCAGGGTGGGCAAGGGCGAGCCAGATG...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCGACTCCAACAGCTGCTaGATGAGCCGCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGDSNSC*MSRWIM
Trigger: CATGATCCAGCGGCTCATGCAGCAGCTGTTGGAGTC...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGGCGGCCATCATCTCCTaGTGCTTCAGGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQAAAIIS*CFRERM
Trigger: CATCCTCTCCCTGAAGCAGCAGGAGATGATGGCCGC...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAACAATCTTCCACACGTaGAGCGACGCCTGCCTCACC +
Preference number: 4 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPTIFHT*SDACLT
Trigger: GGTGAGGCAGGCGTCGCTGCACGTGTGGAAGATTGT...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCCGAGACCAGGCTaGGAAGGTGGCTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RTGQPLLQTSQVESGRPESPRPG*EGGCCS
Trigger: ACTACAGCAGCCACCTTCGCAGCCTGGTCTCGGGCT...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTAGCCGCTACTCTTGCTaGGAACACATGCTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPSRYSC*EHMLWS
Trigger: GCTCCAAAGCATGTGTTCCCAGCAAGAGTAGCGGCT...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAATGGTCAGGGCCTCAGTaGCGGAGGAGTCACTGCACT +
Preference number: 4 (lower is better)
Translates to: RTGQPLLQTSQVESGRPEWSGPQ*RRSHCT
Trigger: AGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCA...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTGCCACTAAGGACGGGTaGTGGGAGATGATTAGCATC +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPATKDG*WEMISI
Trigger: GATGCTAATCATCTCCCACCACCCGTCCTTAGTGGC...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAATCCAGAGCACACTCTaGCTTCAGCAGGCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPIQSTL*LQQAQG
Trigger: ACCCTGCGCCTGCTGAAGCCAGAGTGTGCTCTGGAT...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACCCACCCTGCTGGGGATaGTGTGTGTATGCAACAGCG +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHPPCWG*CVYATA
Trigger: CGCTGTTGCATACACACACCATCCCCAGCAGGGTGG...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACATCCAGCACTGGGGGTaGCCGATAGAGCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHIQHWG*PIELLL
Trigger: CAGGAGAAGCTCTATCGGCCACCCCCAGTGCTGGAT...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCTCACAGCCTGACAGTTaGCCATCTCCAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGSQPDS*PSPAAR
Trigger: ACGAGCAGCTGGAGATGGCCAACTGTCAGGCTGTGA...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGTCAGGGCCTGCAACATaGTGTCTCGTATGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQASGPAT*CLVCPG
Trigger: ACCCGGGCATACGAGACACCATGTTGCAGGCCCTGA...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTGGTCGCTGTGACTGTGGGGACCTaGGTGCCCTGGGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: EAIFSCVWVGFKALALVAVTVGT*VPWEAA
Trigger: GGCGGCCTCCCAGGGCACTCAGGTCCCCACAGTCAC...AGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCATGATTAGCATCTCCTaGGCCAGCTGCTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGMISIS*ASCSVL
Trigger: CAGCACTGAGCAGCTGGCTCAGGAGATGCTAATCAT...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATCGGCAGGGGTCTGCATaGTGGAGAACTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDRQGSA*WRTPPE
Trigger: CTCGGGAGGAGTTCTCCATCATGCAGACCCCTGCCG...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTGTCAGGAGGGGATTCTaGAATCACTCGTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPVRRGF*NHSSQS
Trigger: GCTTTGGGACGAGTGATTTCAGAATCCCCTCCTGAC...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCTGTCAGCACTTCTGTaGGCTTGGGCACAATGTTGG +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPLSALL*AWAQCW
Trigger: CCAACATTGTGCCCAAGCTCACAGAAGTGCTGACAG...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTTCAAGCAGAACAACTTaGAGAGCCCTTTCACGGCTC +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPSSRTT*RALSRL
Trigger: GAGCCGTGAAAGGGCTCTGCAAGTTGTTCTGCTTGA...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTTGGTTCGTGCAGAACTaGACCAGCAGCCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSWFVQN*TSSPSM
Trigger: CATGCTGGGGCTGCTGGTGCAGTTCTGCACGAACCA...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTTCTCTTTGTGGTTCGTaGAGAACTGCACCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPSLCGS*RTAPAA
Trigger: GGCTGCTGGTGCAGTTCTGCACGAACCACAAAGAGA...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGACTGGCGGGCCAGGTTaGGAAGCGCCAGGACCGCTT +
Preference number: 4 (lower is better)
Translates to: LLNLLRMACTPSPGAEEETGGPG*EAPGPL
Trigger: AAGCGGTCCTGGCGCTTCGCAACCTGGCCCGCCAGT...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGATGGTGGAGTGCAGCTaGTCAAAGGTCTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQPLLQTSQVESGRPESQMVECS*SKVLAA
Trigger: GGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCAT...CTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCACCGGGGCTCCTTGTTTaGCCACCAGATCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPPGLLV*PPDHLL
Trigger: GAGAAGATGATCTGGTGGGCAAACAAGGAGCCCCGG...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATGCGAACGCTGGCACATaGGGACTGCAGGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDANAGT*GLQGSK
Trigger: CTTGCTGCCCTGCAGTCCCCATGTGCCAGCGTTCGC...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCACAAAGCATCCAGCACTaGGGGTGGCCGATAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPQSIQH*GWPIEL
Trigger: AAGCTCTATCGGCCACCCCCAGTGCTGGATGCTTTG...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCGTAGCTGGCATCATTaGGTGCGTCCTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPRSWHH*VRPSGT
Trigger: AGTTCCTGAAGGACGCACCCAATGATGCCAGCTACG...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTTGCTCATCACAGCTTTaGCACAGTCATCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPCSSQL*HSHLQP
Trigger: AGGCTGCAGATGACTGTGCCAAAGCTGTGATGAGCA...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTGCACCTTGTGAGAGTTaGGGACAGTCTTCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPAPCES*GQSSVR
Trigger: ACGAACTGAAGACTGTCCTCAACTCTCACAAGGTGC...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTGCTGGGCACTCTGGATaGTGGATTTATCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPAGHSG*WIYQTA
Trigger: AGCTGTTTGATAAATCCATCATCCAGAGTGCCCAGC...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAATGGACAGTGAGGATCTaGAGGATCTGGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: RTGQPLLQTSQVESGRPEWTVRI*RIWAIC
Trigger: GCAGATGGCCCAGATCCTTCAGATCCTCACTGTCCA...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATCCTTCAGGATGGGCTTaGTGGTCTGTGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDPSGWA*WSVAPG
Trigger: CCCTGGAGCCACAGACCATCAAGCCCATCCTGAAGG...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGTGCTGGATGGCTGCCTaGAGGGCTCTGCGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLNLLRMACTPSPGAEEECWMAA*RALREA
Trigger: AGCCTCTCGCAGAGCCCTGCAGGCAGCCATCCAGCA...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATAGCTTCCGAACTGTCTaGTGGGCCTGCCTGCGCACA +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDSFRTV*WACLRT
Trigger: TGTGCGCAGGCAGGCCCAGCAGACAGTTCGGAAGCT...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAGCATCTCCTTCTGCTTaGTGGTCAGCTGTACCTCCT +
Preference number: 4 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPASPSA*WSAVPP
Trigger: AGGAGGTACAGCTGACCAGCAAGCAGAAGGAGATGC...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATGCCAAGCTCCGGCCGTaGCGAACCATCCAGTCAATG +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDAKLRP*RTIQSM
Trigger: CATTGACTGGATGGTTCGGCACGGCCGGAGCTTGGC...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACTCCGCTCCTTCACACTaGCTGTTGTCACCTTCACAG +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHSAPSH*LLSPSQ
Trigger: CTGTGAAGGTGACAACAGCCAGTGTGAAGGAGCGGA...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTGGTCGCTGGAGGTTCTTGGCGGTaGCCTCTGGCTGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EAIFSCVWVGFKALALVAGGSWR*PLAGPR
Trigger: CCGAGGCCCAGCCAGAGGCCACCGCCAAGAACCTCC...AGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTGCAAGGACTTCTGTATaGTGGGCAGAATCAGATCCT +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPARTSV*WAESDP
Trigger: AGGATCTGATTCTGCCCACCATACAGAAGTCCTTGC...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTTCAGGCGGGGGCTGTTaGACTTCAGCTGATTTGCCA +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSSGGGC*TSADLP
Trigger: TGGCAAATCAGCTGAAGTCCAACAGCCCCCGCCTGA...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTGCCTCCTTGTCCATCTaGGCTTGCAGCATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSASLSI*ACSISF
Trigger: GAAGGAGATGCTGCAAGCCCAGATGGACAAGGAGGC...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTAAGTTCTTCTTGTCCTaGATAGCATCAGTCAGCGCG +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPKFFLS*IASVSA
Trigger: CGCGCTGACTGATGCTATCCAGGACAAGAAGAACTT...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACTCCTGGAAGGCTCTCTaGACAATGGGCATGATGAGC +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHSWKAL*TMGMMS
Trigger: GCTCATCATGCCCATTGTCCAGAGAGCCTTCCAGGA...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTATGTCCTCCAAAGCCTaGTGGCCAATGGTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSMSSKA*WPMVEC
Trigger: GCACTCCACCATTGGCCACCAGGCTTTGGAGGACAT...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGACTCTGAGTGGGACATaGACCGGAGCAAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLNLLRMACTPSPGAEEETLSGT*TGARGH
Trigger: GTGCCCCCTTGCTCCGGTTCATGTCCCACTCAGAGT...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGATGGTGCTGATGAGCTaGGGGAGGACGCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLNLLRMACTPSPGAEEEMVLMS*GRTRSG
Trigger: TCCTGACCGCGTCCTCCCTCAGCTCATCAGCACCAT...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATGAGAGGATCACAGCCTaGCAGTTGGCCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDERITA*QLAISS
Trigger: GCTGGAGATGGCCAACTGTCAGGCTGTGATCCTCTC...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGCAGGGCTGGAGTCATTaGAGAGGCGGATCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: PLLNLLRMACTPSPGAEEQGWSH*RGGSSP
Trigger: CGGGCTTGATCCGCCTCTTCAATGACTCCAGCCCTG...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACCGATGTGATACTTCATaGGGAAGCCCATGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHRCDTS*GSPCLE
Trigger: TTCGAGGCATGGGCTTCCTCATGAAGTATCACATCG...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGCTTCCTGTCTCGATGTaGTACTTCATGAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GQPLLQTSQVESGRPESQLPVSM*YFMRKP
Trigger: GGGCTTCCTCATGAAGTATCACATCGAGACAGGAAG...CTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCGTGAGCACTCAAATTaGTCATCACAGCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPREHSN*SSQLWH
Trigger: GTGCCAAAGCTGTGATGAGCAATTTGAGTGCTCACG...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTTGCTGTCCAGCCTTCTaGACTTTGACGTGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSCCPAF*TLTWES
Trigger: AGACTCCCACGTCAAAGTGCAGAAGGCTGGACAGCA...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTTCATCAAAGAGGCCTTaGTCTAGCTGTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSSSKRP*SSCGSS
Trigger: GCTGCTGCCACAGCTAGAGCAAGGCCTCTTTGATGA...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGACAAACCTCAGGGCCTaGAACATGGTGTCTCGTATG +
Preference number: 4 (lower is better)
Translates to: GQPLLQTSQVESGRPESQTNLRA*NMVSRM
Trigger: CATACGAGACACCATGTTGCAGGCCCTGAGGTTTGT...CTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACTGTCCAGCAAGTACTTaGGAGGCTTGGCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHCPAST*EAWLCS
Trigger: TGAGCAAAGCCAAGCCTCCCAAGTACTTGCTGGACA...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTTCCTGCTGGGCACTCTaGATGATGGATTTATCAAAC +
Preference number: 4 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPSCWAL*MMDLSN
Trigger: GTTTGATAAATCCATCATCCAGAGTGCCCAGCAGGA...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGTCAGCAGGCGCAGCATaGCCACTCGAGGCAGCAACT +
Preference number: 4 (lower is better)
Translates to: PLLNLLRMACTPSPGAEESAGAA*PLEAAT
Trigger: AGTTGCTGCCTCGAGTGGCCATGCTGCGCCTGCTGA...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATCCATGCCCTTCACCATaGCCCCAAGAGCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDPCPSP*PQEPLQ
Trigger: CTGCAAAGGCTCTTGGGGCCATGGTGAAGGGCATGG...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATCTTCAGGGCTGCGCGTaGCTTCCAACAGATCCTCGA +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDLQGCA*LPTDPR
Trigger: TCGAGGATCTGTTGGAAGCCACGCGCAGCCCTGAAG...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATATCCTGGGGATGATCTaGTCCAGGTGCCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDILGMI*SRCLVM
Trigger: CATCACCAGGCACCTGGATCAGATCATCCCCAGGAT...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATCCTTCAGTGCTAACATaGCAGCTGGGAGGATCACGC +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDPSVLT*QLGGSR
Trigger: GCGTGATCCTCCCAGCTGTCATGTTAGCACTGAAGG...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTTGGGAGGCTTGGCTTTaGTCATCAGAATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPWEAWL*SSECSS
Trigger: TGAAGAACATTCTGATGAGCAAAGCCAAGCCTCCCA...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACGGACTTCAGCTGATTTaGCAAGCCTTTCACGATGTC +
Preference number: 4 (lower is better)
Translates to: KPGAASGSTDAPLNALRHGLQLI*QAFHDV
Trigger: GACATCGTGAAAGGCTTGGCAAATCAGCTGAAGTCC...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCGCCTTCTCTACTGTCTaGATAAGCAATGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGAFSTV*ISNGRK
Trigger: CTTTCTGCCATTGCTTATGCAGACAGTAGAGAAGGC...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGTTTATGCTGTCCTGCTaGGCACTCTGGATGATGGAT +
Preference number: 4 (lower is better)
Translates to: QPLLQTSQVESGRPESQAFMLSC*ALWMMD
Trigger: ATCCATCATCCAGAGTGCCCAGCAGGACAGCATAAA...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATGGGTGCGGGGAGTGTTaGAGACGACAATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDGCGEC*RRQSST
Trigger: TGTGGAAGATTGTCGTCTCCAACACTCCCCGCACCC...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATCTCCAGCTGCTCGTCTaGAGTCCCAAGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDLQLLV*SPKLLL
Trigger: AAGGAGAAGCTTGGGACTCCAGACGAGCAGCTGGAG...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGAGGACAGGGATGTACTaGATCAGGCCACACGGGTTC +
Preference number: 4 (lower is better)
Translates to: PLLNLLRMACTPSPGAEERTGMY*IRPHGF
Trigger: GAACCCGTGTGGCCTGATTCAGTACATCCCTGTCCT...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGTCTCGGCCACCAGCCTaGTGTCACTACATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLNLLRMACTPSPGAEEESRPPA*CHYMGS
Trigger: AGAACCCATGTAGTGACATCAGGCTGGTGGCCGAGA...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATGAGCTATCCAAGTACTaGGAGAGCTTGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDELSKY*ESLFRA
Trigger: GGCCCTGAACAAGCTCTCGCAGTACTTGGATAGCTC...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGGCTGGCATCATTGGGTaGGTCCTTCAGGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LLNLLRMACTPSPGAEEEAGIIG*VLQELL
Trigger: GAGGAGTTCCTGAAGGACGCACCCAATGATGCCAGC...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGATGACAGAGCCAATCTaGCTGAGGGCCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLNLLRMACTPSPGAEEEMTEPI*LRACCP
Trigger: TGGACAGCAGGCCCTCAGGCAGATTGGCTCTGTCAT...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGATGTTGCCAATAATCTaGGCTGCCATCTTTCGTGTG +
Preference number: 4 (lower is better)
Translates to: GQPLLQTSQVESGRPESQMLPII*AAIFRV
Trigger: CACACGAAAGATGGCAGCGCAGATTATTGGCAACAT...CTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGGTGCGATGTCCACTTTaGTGGCTGTGGCCACGATCT +
Preference number: 4 (lower is better)
Translates to: LLNLLRMACTPSPGAEEEVRCPL*WLWPRS
Trigger: AGATCGTGGCCACAGCCAGCAAAGTGGACATCGCAC...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTGGTCGCTGGATCTCTCGCAGGGTaGGGGGAGTGTTGGAGACGA +
Preference number: 4 (lower is better)
Translates to: EAIFSCVWVGFKALALVAGSLAG*GECWRR
Trigger: TCGTCTCCAACACTCCCCGCACCCTGCGAGAGATCC...AGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTATCCACTTTGGAGCCTaGACCCTGAATCACAAACCT +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSIHFGA*TLNHKP
Trigger: AGGTTTGTGATTCAGGGTGCAGGCTCCAAAGTGGAT...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTGAACCATCCAGTCAATaGCAGATACGTCAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSEPSSQ*QIRQLA
Trigger: TGCTAGCTGACGTATCTGGCATTGACTGGATGGTTC...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATGCGTCCATCTCTTTGTaGTTCGTGCAGAACTGCACC +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDASISL*FVQNCT
Trigger: GGTGCAGTTCTGCACGAACCACAAAGAGATGGACGC...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTTTCAATAACATTCTCTaGGCTCCTCAGCAAGGACTT +
Preference number: 4 (lower is better)
Translates to: GAASGSTDAPLNALRHRPFNNIL*APQQGL
Trigger: AAGTCCTTGCTGAGGAGCCCAGAGAATGTTATTGAA...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGTCTTTCGTGTGTCTGTaGAGCGGTCCTGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PLLNLLRMACTPSPGAEESFVCL*SGPGRL
Trigger: GAGCCTTCCAGGACCGCTCCACAGACACACGAAAGA...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGCGATGTCCACTTTGCTaGCTGTGGCCACGATCTCTG +
Preference number: 4 (lower is better)
Translates to: PLLNLLRMACTPSPGAEERCPLC*LWPRSL
Trigger: CAGAGATCGTGGCCACAGCCAGCAAAGTGGACATCG...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAGCGTCTCTATATCGATaGAGTGTCAAGCAGAACAAC +
Preference number: 4 (lower is better)
Translates to: RTGQPLLQTSQVESGRPEASLYR*SVKQNN
Trigger: GTTGTTCTGCTTGACACTGCATCGATATAGAGACGC...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGATTGCTGTATCTGCCTaGACACAGTCTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLLNLLRMACTPSPGAEEIAVSA*TQSAGS
Trigger: GCTCCCAGCAGACTGTGTGCAGGCAGATACAGCAAT...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATTGGGAACACATGCTTTaGAGCCAACCCCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDWEHML*SQPLKT
Trigger: AGTCTTCAGGGGTTGGCTCCAAAGCATGTGTTCCCA...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGCAGAAAGGGAGCCCATaGCGTTCATGGAAGACTGGT +
Preference number: 4 (lower is better)
Translates to: PLLNLLRMACTPSPGAEEQKGSP*RSWKTG
Trigger: ACCAGTCTTCCATGAACGCCATGGGCTCCCTTTCTG...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTGGTCGCTTCCTCCAAAGCCTGGTaGCCAATGGTGGAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EAIFSCVWVGFKALALVASSKAW*PMVECS
Trigger: GCTGCACTCCACCATTGGCCACCAGGCTTTGGAGGA...AGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTGGTCGCTCAGGCTAAGGATGGCTaGGAAGTACTGCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: EAIFSCVWVGFKALALVAQAKDG*EVLLHQ
Trigger: CTGGTGGAGCAGTACTTCTCAGCCATCCTTAGCCTG...AGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGCTGTTGGACTTCAGCTaGTTTGCCAAGCCTTTCACG +
Preference number: 4 (lower is better)
Translates to: LLNLLRMACTPSPGAEEELLDFS*FAKPFT
Trigger: CGTGAAAGGCTTGGCAAATCAGCTGAAGTCCAACAG...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGGCTTCCAATCCCTaGAAGGACACTCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: PLLNLLRMACTPSPGAEEEASNP*KDTHLL
Trigger: CAGAAGATGAGTGTCCTTTCAGGGATTGGAAGCCTC...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATATACCACGTGATGACTaGGGCTTCCAATCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDIPRDD*GFQSLK
Trigger: TTTCAGGGATTGGAAGCCTCAGTCATCACGTGGTAT...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCCCCAGCATCCTCCTTaGCAGCAGGCACGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPPQHPP*QQAREV
Trigger: CACCTCTCGTGCCTGCTGTCAAGGAGGATGCTGGGG...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCACGGCCAGCTGCTGGATaGCTGCCTGCAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPRPAAG*LPAGLC
Trigger: GCAGAGCCCTGCAGGCAGCCATCCAGCAGCTGGCCG...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCAGCGGGGCGGCATCTaGCTCGCCCTTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMQRGGI*LALAHP
Trigger: AGGGTGGGCAAGGGCGAGCCAGATGCCGCCCCGCTG...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTGGTCGCTACATTCTCCTTCCCATaGGCATTGAGCGTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: EAIFSCVWVGFKALALVATFSFP*ALSVAS
Trigger: GCTCGCGACGCTCAATGCCCATGGGAAGGAGAATGT...AGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAGACTCCTGGACCTGCTaGGAGGGTGTGGAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPDSWTC*EGVERA
Trigger: CGCCCTCTCCACACCCTCTCAGCAGGTCCAGGAGTC...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATAGTCTCCATCAGCCATaGCAGCAAATCTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDSLHQP*QQIFKA
Trigger: TGCTTTGAAGATTTGCTGCCATGGCTGATGGAGACT...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCGGAGGCCAAAGAGAGTaGGCAGGATCTCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPGGQRE*AGSLAG
Trigger: CCCTGCGAGAGATCCTGCCCACTCTCTTTGGCCTCC...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCAGCAGCAGCAGGCACTaGACCTCCACCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPSSSRH*TSTSLF
Trigger: GAACAAGCTGGTGGAGGTGCAGTGCCTGCTGCTGCT...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAGCACCGTCCACAGCATaGTTGTGGGAGCCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGAPSTA*LWEPPS
Trigger: GCTGGGCGGCTCCCACAAGCATGCTGTGGACGGTGC...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAGCCCATAACCTCCGCTaGCTGCCGCTGGTACCGTGC +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGAHNLR*LPLVPC
Trigger: GCACGGTACCAGCGGCAGGCAGCGGAGGTTATGGGC...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCAGGCAGGACGACAGCTaGTTAGGTGCACAGTACGCC +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPRQDDS*LGAQYA
Trigger: GGCGTACTGTGCACCTAAGCAGCTGTCGTCCTGCCT...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCGCCCAAGCCCTTGGCTaGTTCTTCCTTCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPAQALG*FFLLLR
Trigger: CCTGAGCAGAAGGAAGAAGCAGCCAAGGGCTTGGGC...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAGCTGCAGGAAGGGGATaGACAGCTCAGCCACACAGC +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPAAGRG*TAQPHS
Trigger: GCTGTGTGGCTGAGCTGTTCATCCCCTTCCTGCAGC...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAACAGCTGCTGCATaGGCCGCTGGATCATGCCCC +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMPTAAA*AAGSCP
Trigger: GGGGCATGATCCAGCGGCTCATGCAGCAGCTGTTGG...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGACACCAGCTGGGTGTCTaGGCGGCCCATGTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGHQLGV*AAHVES
Trigger: GGACTCTACATGGGCCGCTCAGACACCCAGCTGGTG...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCGCTAGCAGGCACTGCTaGAGGACAGTGTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPASRHC*RTVLSS
Trigger: AGAGCTCAACACTGTCCTTCAGCAGTGCCTGCTAGC...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTGGTCGCTTGTCCTGAACCTCATTaGTGTATCTGCCTGCACACA +
Preference number: 4 (lower is better)
Translates to: EAIFSCVWVGFKALALVACPEPH*CICLHT
Trigger: TGTGTGCAGGCAGATACAGCAATGAGGTTCAGGACA...AGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAACCAGAGCGCCAGGATaGAGACGGCGTGTACCAAGG +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPTRAPG*RRRVPR
Trigger: CCTTGGTACACGCCGTCTCCATCCTGGCGCTCTGGT...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCTCTGTGGAGCGGTCCTaGAAGGCTCTCTGGACAATG +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPSVERS*KALWTM
Trigger: CATTGTCCAGAGAGCCTTCCAGGACCGCTCCACAGA...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCAAGCCTGGTGGCCAATaGTGGAGTGCAGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPKPGGQ*WSAAAQ
Trigger: TTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTT...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGTCCACCGAGTCTGCCTaGCAGGCCAGCTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMSTESA*QASFLS
Trigger: GCTGAGGAAGCTGGCCTGCCAGGCAGACTCGGTGGA...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGTCCCCGGCAGGGGTCTaGATGATGGAGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMSPAGV*MMENSS
Trigger: GGAGGAGTTCTCCATCATGCAGACCCCTGCCGGGGA...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAGTGTCCAGCAGGGTCTaGAGGCACTTCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPVSSRV*RHFWVF
Trigger: GAAGACCCAGAAGTGCCTGCAGACCCTGCTGGACAC...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCTTTGCAGACACGGTaGGCACCTCAGGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMPLQTR*APQGQG
Trigger: ACCCTGTCCCTGAGGTGCGCACCGTGTCTGCAAAGG...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCTCGATGATGATCCGGTaGCCAGTGTCATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPSMMIR*PVSSST
Trigger: AGTGGAGGATGACACTGGGCACCGGATCATCATCGA...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGATGGTGTCGTCCACCTaGTCCACCGAGTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMMVSST*STESAW
Trigger: CCAGGCAGACTCGGTGGAGCAGGTGGACGACACCAT...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCACCAGCAGCCCCAGCATaGCAGCATAGTTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPPAAPA*QHSFGW
Trigger: CCAGCCAAAACTATGCTGCCATGCTGGGGCTGCTGG...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCACCTTGCCCACCCTGCTaGGGATGGTGTGTGTATGCA +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPPCPPC*GWCVYA
Trigger: TGCATACACACACCATCCCCAGCAGGGTGGGCAAGG...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGTTGGAGCCTGCACCCTaGATCACAAACCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMLEPAP*ITNLRA
Trigger: GGCCCTGAGGTTTGTGATTCAGGGTGCAGGCTCCAA...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAGAAGACTGGAGAGAGTaGAGGAGGTTCTTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPEDWRE*RRFLAV
Trigger: CACCGCCAAGAACCTCCTGCACTCTCTCCAGTCTTC...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCATCGTGCACTTCCTGCTaGAGGAAGGGGATGAACAGC +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPSCTSC*RKGMNS
Trigger: GCTGTTCATCCCCTTCCTGCAGCAGGAAGTGCACGA...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCATCCTTGTAAGAAGTaGTGGCCAGAGTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPHPCKK*WPESRL
Trigger: CAGTCTGGACTCTGGCCAGCACTTCTTACAAGGATG...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCGACAGCTGCTTAGGTaGACAGTACGCCATTGCCCC +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMRQLLR*TVRHCP
Trigger: GGGGCAATGGCGTACTGTGCACCTAAGCAGCTGTCG...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAAAGCACAGCAACAGATaGGGCAGCACGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPKHSNR*GSTWTT
Trigger: TGTGGTCCACGTGCTGCCCCATCTGTTGCTGTGCTT...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCACCACTTTGCTGGCTGTaGCCACGATCTCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPPLCWL*PRSLAS
Trigger: TGATGCCAGAGATCGTGGCCACAGCCAGCAAAGTGG...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAGTGGTGTTGTCAGCTTaGGCACCAGATAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPVVLSA*APDRAA
Trigger: TGCTGCCCTATCTGGTGCCCAAGCTGACAACACCAC...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGATCGATCAGGGCCAGCTaGTTACCAGCGTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGSIRAS*LPASSF
Trigger: GAAGCTGGACGCTGGTAACCAGCTGGCCCTGATCGA...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCAGGTCCCCAAGAAGTTaGACAGAGCTGAACCGTATT +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPRSPRS*TELNRI
Trigger: AATACGGTTCAGCTCTGTTCAACTTCTTGGGGACCT...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAAGTGTCATCCTCCACTaGGAGGATCACAGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPSVILH*EDHSLT
Trigger: TGTCAGGCTGTGATCCTCTCAGTGGAGGATGACACT...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGATTCCAGATGTCTCCTTaGCGCTTGGCCTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGFQMSP*RLAFRG
Trigger: TCCCCTGAAGGCCAAGCGGCAAGGAGACATCTGGAA...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGATGGCTGAGAAGTACTaGTCCACCAGCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMMAEKY*STSPGF
Trigger: GAACCCTGGGCTGGTGGAGCAGTACTTCTCAGCCAT...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGACACAGGGCAGGATTCTaGACAGAGGCAGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGHRAGF*TEAVMV
Trigger: CACCATCACTGCCTCTGTGCAGAATCCTGCCCTGTG...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAACAGGCAGCTCCTCCTaGCACCAGGACTTATCCAGA +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGTGSSS*HQDLSR
Trigger: TCTGGATAAGTCCTGGTGCCAGGAGGAGCTGCCTGT...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAGCAGATCGAGGCCCATaGTTGACCAAAGCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGADRGP*LTKAFR
Trigger: CCGAAAGGCTTTGGTCAACCATGGGCCTCGATCTGC...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAAGAGCTTCCCCAGCATaGTACAGAGCATCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPRASPA*YRASRR
Trigger: CCTTCGAGATGCTCTGTACCATGCTGGGGAAGCTCT...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGACAAGGCACCCAGCTGTaGAGATCCGAGTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGQGTQL*RSECCP
Trigger: AGGACAACACTCGGATCTCCACAGCTGGGTGCCTTG...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGACTGCACACAGTCTGCTaGGAGCCACATTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGLHTVC*EPHSQP
Trigger: TGGCTGTGAATGTGGCTCCCAGCAGACTGTGTGCAG...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCACAGATCCTTAAACTCTaGGTGGGACATGAACCGGAG +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPQILKL*VGHEPE
Trigger: CTCCGGTTCATGTCCCACTCAGAGTTTAAGGATCTG...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGACAAAGAGCAGAGATCTaGCTGCAGATCGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGQRAEI*LQIEAH
Trigger: ATGGGCCTCGATCTGCAGTCAGATCTCTGCTCTTTG...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAGGGACGGGGCATCAATaGAGTGAACAAACTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPGTGHQ*SEQTWC
Trigger: ACACCAAGTTTGTTCACTTCATTGATGCCCCGTCCC...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCTCACTACATGGGTTCTaGAGACACTTGATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPSLHGF*RHLMRR
Trigger: CCTTCTCATCAAGTGTCTGCAGAACCCATGTAGTGA...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCAGTGTTCTTGTCCTTaGTGTTATCGAGAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPQCSCP*CYREEP
Trigger: AGGCTCTTCTCGATAACACCAAGGACAAGAACACTG...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGACTTCCAGGATGGGGATaGTCTCAGGAAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGLPGWG*SQEGSS
Trigger: AGAAGATCCTTCCTGAGATCATCCCCATCCTGGAAG...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR GCA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAGCCAATAATCTGCGCTaGCATCTTTCGTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPANNLR*HLSCVC
Trigger: ACAGACACACGAAAGATGGCAGCGCAGATTATTGGC...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCTTGTAAGAAGTGCTaGCCAGAGTCCAGACTGTAC +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMPCKKC*PESRLY
Trigger: GTACAGTCTGGACTCTGGCCAGCACTTCTTACAAGG...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAGGTTTTTCCGAATaGCAGCATCCACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMPGFSE*QHPLWS
Trigger: GCTCCAAAGTGGATGCTGCCATTCGGAAAAACCTGG...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR TCA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGACTGAGGATCATGTCCTaGACCTCATTGCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGLRIMS*TSLLYL
Trigger: CAGATACAGCAATGAGGTTCAGGACATGATCCTCAG...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGTCCTTAAACTCTGAGTaGGACATGAACCGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMSLNSE*DMNRSK
Trigger: CTTGCTCCGGTTCATGTCCCACTCAGAGTTTAAGGA...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGGCACCATCTTTAACATaGGGAAGACCAAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMAPSLT*GRPRRR
Trigger: CCTTCTCCTTGGTCTTCCCCATGTTAAAGATGGTGC...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CCA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGAGGACACTCATCTTCTaGGCTATGATGGTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMRTLIF*AMMVSF
Trigger: AAAGCTAACCATCATAGCCCAGAAGATGAGTGTCCT...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp CTCCATGAGCCTGCCCATAACCTCCGCTGCCTGCCGCTGGTACCGTaGCACCGCCTGGGAAAGGGCTTCAGCCCCGGCCTGCCTCACGGC +
Preference number: 5 (lower is better)
Translates to: LHEPAHNLRCLPLVP*HRLGKGFSPGLPHG
Trigger: GCCGTGAGGCAGGCCGGGGCTGAAGCCCTTTCCCAGGCGGTGGCACGGTACCAGCGGCAGGCAGCGGAGGTTATGGGCAGGCTCATGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GGCGAGGGGAGCCCGTCCCGATCACCCACGTCAGCAGGCGCAGCATaGCCACTCGAGGCAGCAACTCCGGGCCATTCTCGTCCACCCGCT +
Preference number: 5 (lower is better)
Translates to: GEGSPSRSPTSAGAA*PLEAATPGHSRPPA
Trigger: AGCGGGTGGACGAGAATGGCCCGGAGTTGCTGCCTCGAGTGGCCATGCTGCGCCTGCTGACGTGGGTGATCGGGACGGGCTCCCCTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp CTTCCACACGTGCAGCGACGCCTGCCTCACCACCAGCTGGGTGTCTaGGCGGCCCATGTAGAGTCCCGCCAGGACCCGGTTCCGCCGGTC +
Preference number: 5 (lower is better)
Translates to: LPHVQRRLPHHQLGV*AAHVESRQDPVPPV
Trigger: GACCGGCGGAACCGGGTCCTGGCGGGACTCTACATGGGCCGCTCAGACACCCAGCTGGTGGTGAGGCAGGCGTCGCTGCACGTGTGGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp TCAGGGCCTCAGTGGCGGAGGAGTCACTGCACTGGCGGGCCAGGTTaGGAAGCGCCAGGACCGCTTCATCCATCAGGCGGGGGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: SGPQWRRSHCTGGPG*EAPGPLHPSGGGCW
Trigger: CCAACAGCCCCCGCCTGATGGATGAAGCGGTCCTGGCGCTTCGCAACCTGGCCCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCACATGGGGACTGCAGGGCAGCAAGCAGCACGTCCACCTCCTCCTaGTCTGCGAAGGCACAGCCGTCCTCCCCGCTGCTGCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: AHGDCRAASSTSTSS*SAKAQPSSPLLLAH
Trigger: GTGTGCCAGCAGCAGCGGGGAGGACGGCTGTGCCTTCGCAGAGCAGGAGGAGGTGGACGTGCTGCTTGCTGCCCTGCAGTCCCCATGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GAGCTCCATCAGGCCCCGGAGCGCTGTCTCGCGAACGCTGGCACATaGGGACTGCAGGGCAGCAAGCAGCACGTCCACCTCCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: ELHQAPERCLANAGT*GLQGSKQHVHLLLL
Trigger: GAGCAGGAGGAGGTGGACGTGCTGCTTGCTGCCCTGCAGTCCCCATGTGCCAGCGTTCGCGAGACAGCGCTCCGGGGCCTGATGGAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CTAGGCGGAGCTCCATCAGGCCCCGGAGCGCTGTCTCGCGAACGCTaGCACATGGGGACTGCAGGGCAGCAAGCAGCACGTCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: LGGAPSGPGALSRER*HMGTAGQQAARPPP
Trigger: AGGAGGTGGACGTGCTGCTTGCTGCCCTGCAGTCCCCATGTGCCAGCGTTCGCGAGACAGCGCTCCGGGGCCTGATGGAGCTCCGCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp AGGAGAAGGCCGGTGCAGACAGCGGGGCGGCATCTGGCTCGCCCTTaGCCACCCTGCTGGGGATGGTGTGTGTATGCAACAGCGACACCG +
Preference number: 5 (lower is better)
Translates to: RRRPVQTAGRHLARP*PPCWGWCVYATATP
Trigger: CGGTGTCGCTGTTGCATACACACACCATCCCCAGCAGGGTGGGCAAGGGCGAGCCAGATGCCGCCCCGCTGTCTGCACCGGCCTTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp ATCAGGCCCCGGAGCGCTGTCTCGCGAACGCTGGCACATGGGGACTaGAGGGCAGCAAGCAGCACGTCCACCTCCTCCTGCTCTGCGAAG +
Preference number: 5 (lower is better)
Translates to: IRPRSAVSRTLAHGD*RAASSTSTSSCSAK
Trigger: CTTCGCAGAGCAGGAGGAGGTGGACGTGCTGCTTGCTGCCCTGCAGTCCCCATGTGCCAGCGTTCGCGAGACAGCGCTCCGGGGCCTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp CAGGGAGAGGATGCCCAGGCCCTTGACCAGGCCCGCCAGCCCGTATaGCGCCCCTTTGCGCTCCGCATACTTGTCCGACTCCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: QGEDAQALDQARQPV*RPFALRILVRLQQL
Trigger: CAGCTGTTGGAGTCGGACAAGTATGCGGAGCGCAAAGGGGCGGCATACGGGCTGGCGGGCCTGGTCAAGGGCCTGGGCATCCTCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GAAGACTGGAGAGAGTGCAGGAGGTTCTTGGCGGTGGCCTCTGGCTaGGCCTCGGCCAGCTGCTGGATGGCTGCCTGCAGGGCTCTGCGA +
Preference number: 5 (lower is better)
Translates to: EDWRECRRFLAVASG*ASASCWMAACRALR
Trigger: TCGCAGAGCCCTGCAGGCAGCCATCCAGCAGCTGGCCGAGGCCCAGCCAGAGGCCACCGCCAAGAACCTCCTGCACTCTCTCCAGTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTCCCTCTGGCAGATCTTaGCCGGCGATGCATCGCCCC +
Preference number: 5 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPPSGRS*PAMHRP
Trigger: GGGGCGATGCATCGCCGGCAAAGATCTGCCAGAGGG...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCGTCCACAGCATGCTaGTGGGAGCCGCCCAGCACC +
Preference number: 5 (lower is better)
Translates to: GAASGSTDAPLNALRHRPPSTAC*WEPPST
Trigger: GGTGCTGGGCGGCTCCCACAAGCATGCTGTGGACGG...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCACACTGGCGGGCCAGGTaGCGAAGCGCCAGGACCGCT +
Preference number: 5 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPHWRAR*RSARTA
Trigger: AGCGGTCCTGGCGCTTCGCAACCTGGCCCGCCAGTG...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTCAAAAGCCGCTCAGCTaGGCCTCGGCCTGGGCGTCA +
Preference number: 5 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPQKPLS*ASAWAS
Trigger: TGACGCCCAGGCCGAGGCCAAGCTGAGCGGCTTTTG...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTAGCTGCTCAAAGGTCTaGGCTGCCGCCTCCCGGACC +
Preference number: 5 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPSCSKV*AAASRT
Trigger: GGTCCGGGAGGCGGCAGCCAAGACCTTTGAGCAGCT...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp CCACAGACAGCTTGGAGAGCAGAAGGGCTGCGGCGACCCCTTCGGTaGCTGTGGGGACCTGAGTGCCCTGGGAGGCCGCCTTCTCTACTG +
Preference number: 5 (lower is better)
Translates to: PQTAWRAEGLRRPLR*LWGPECPGRPPSLL
Trigger: CAGTAGAGAAGGCGGCCTCCCAGGGCACTCAGGTCCCCACAGTCACCGAAGGGGTCGCCGCAGCCCTTCTGCTCTCCAAGCTGTCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCATCTGGCTCGCCCTTGCCCACCCTGCTGGGGATGGTGTGTGTATaGAACAGCGACACCGCCCTCCTGACAGCCACAGGCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ASGSPLPTLLGMVCV*NSDTALLTATGSSS
Trigger: GGAGGAGCTGCCTGTGGCTGTCAGGAGGGCGGTGTCGCTGTTGCATACACACACCATCCCCAGCAGGGTGGGCAAGGGCGAGCCAGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp TCTCGCAGGGTGCGGGGAGTGTTGGAGACGACAATCTTCCACACGTaGAGCGACGCCTGCCTCACCACCAGCTGGGTGTCTGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: SRRVRGVLETTIFHT*SDACLTTSWVSERP
Trigger: GGGCCGCTCAGACACCCAGCTGGTGGTGAGGCAGGCGTCGCTGCACGTGTGGAAGATTGTCGTCTCCAACACTCCCCGCACCCTGCGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp TGCCGCCTCCCGGACCTCCTCCAGGGGATCACACAGCGCCTTCCTTaGCGTGGGCACAAGGGACTCAGAGAAGAAGAGCACAGCGTCCCG +
Preference number: 5 (lower is better)
Translates to: CRLPDLLQGITQRLP*RGHKGLREEEHSVP
Trigger: CGGGACGCTGTGCTCTTCTTCTCTGAGTCCCTTGTGCCCACGGCAAGGAAGGCGCTGTGTGATCCCCTGGAGGAGGTCCGGGAGGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GGTTCTTGGCGGTGGCCTCTGGCTGGGCCTCGGCCAGCTGCTGGATaGCTGCCTGCAGGGCTCTGCGAGAGGCTGCGTCTCTATATCGAT +
Preference number: 5 (lower is better)
Translates to: GSWRWPLAGPRPAAG*LPAGLCERLRLYID
Trigger: ATCGATATAGAGACGCAGCCTCTCGCAGAGCCCTGCAGGCAGCCATCCAGCAGCTGGCCGAGGCCCAGCCAGAGGCCACCGCCAAGAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACCTGGGGATGTCGCCCTaGAGCCCTGGCACCCCAGAG +
Preference number: 5 (lower is better)
Translates to: KPGAASGSTDAPLNALRHLGMSP*SPGTPE
Trigger: CTCTGGGGTGCCAGGGCTCAAGGGCGACATCCCCAG...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp GGATCTTGGAGAGGGACTGGAGCAGCTCCTCGCCCCGCCTCATCTTaGGCAGGTTCACGATGGCCTGGTCGCTGTAGGCCCGCACGACAG +
Preference number: 5 (lower is better)
Translates to: GSWRGTGAAPRPASS*AGSRWPGRCRPARQ
Trigger: CTGTCGTGCGGGCCTACAGCGACCAGGCCATCGTGAACCTGCTCAAGATGAGGCGGGGCGAGGAGCTGCTCCAGTCCCTCTCCAAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp TCGCAAACAGGTGCTTGGTCAGGGCCTCAGTGGCGGAGGAGTCACTaGACTGGCGGGCCAGGTTGCGAAGCGCCAGGACCGCTTCATCCA +
Preference number: 5 (lower is better)
Translates to: SQTGAWSGPQWRRSH*TGGPGCEAPGPLHP
Trigger: TGGATGAAGCGGTCCTGGCGCTTCGCAACCTGGCCCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACCTGTTTGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp AGCCTGGTGGCCAATGGTGGAGTGCAGCTGCTCAAAGGTCTTGGCTaGCGCCTCCCGGACCTCCTCCAGGGGATCACACAGCGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: SLVANGGVQLLKGLG*RLPDLLQGITQRLP
Trigger: AGGAAGGCGCTGTGTGATCCCCTGGAGGAGGTCCGGGAGGCGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp AACAGGTGCTTGGTCAGGGCCTCAGTGGCGGAGGAGTCACTGCACTaGCGGGCCAGGTTGCGAAGCGCCAGGACCGCTTCATCCATCAGG +
Preference number: 5 (lower is better)
Translates to: NRCLVRASVAEESLH*RARLRSARTASSIR
Trigger: CCTGATGGATGAAGCGGTCCTGGCGCTTCGCAACCTGGCCCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CTGAGCCTCCAAGGATCGCAAACAGGTGCTTGGTCAGGGCCTCAGTaGCGGAGGAGTCACTGCACTGGCGGGCCAGGTTGCGAAGCGCCA +
Preference number: 5 (lower is better)
Translates to: LSLQGSQTGAWSGPQ*RRSHCTGGPGCEAP
Trigger: TGGCGCTTCGCAACCTGGCCCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACCTGTTTGCGATCCTTGGAGGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CCAAAGCCTGGTGGCCAATGGTGGAGTGCAGCTGCTCAAAGGTCTTaGCTGCCGCCTCCCGGACCTCCTCCAGGGGATCACACAGCGCCT +
Preference number: 5 (lower is better)
Translates to: PKPGGQWWSAAAQRS*LPPPGPPPGDHTAP
Trigger: AGGCGCTGTGTGATCCCCTGGAGGAGGTCCGGGAGGCGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTGCCAGCACCCGGGTATaGACGGGTGGTGTTGTCAGC +
Preference number: 5 (lower is better)
Translates to: GAASGSTDAPLNALRHRPASTRV*TGGVVS
Trigger: GCTGACAACACCACCCGTCAATACCCGGGTGCTGGC...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp CTGGGAACACATGCTTTGGAGCCAACCCCTGAAGACTGGAGAGAGTaGAGGAGGTTCTTGGCGGTGGCCTCTGGCTGGGCCTCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LGTHALEPTPEDWRE*RRFLAVASGWASAS
Trigger: GCTGGCCGAGGCCCAGCCAGAGGCCACCGCCAAGAACCTCCTGCACTCTCTCCAGTCTTCAGGGGTTGGCTCCAAAGCATGTGTTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCCAGCTTAACACCCCCAAGAGAGGACAGCAGCTTCCGAACTGTCTaGTGGGCCTGCCTGCGCACATGCCAGGTCCGGCTCAGGAGCACA +
Preference number: 5 (lower is better)
Translates to: ASLTPPREDSSFRTV*WACLRTCQVRLRST
Trigger: TGTGCTCCTGAGCCGGACCTGGCATGTGCGCAGGCAGGCCCAGCAGACAGTTCGGAAGCTGCTGTCCTCTCTTGGGGGTGTTAAGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GGGAGAATGTCCTCCAAAGCCTGGTGGCCAATGGTGGAGTGCAGCTaGTCAAAGGTCTTGGCTGCCGCCTCCCGGACCTCCTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GRMSSKAWWPMVECS*SKVLAAASRTSSRG
Trigger: TCCCCTGGAGGAGGTCCGGGAGGCGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTTTGGAGGACATTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCCTTGGAGCGGGAGCAGTACATGTTCAGGATGATGGCCGCCGCCTaGCTCATGCCCACTTCAGGGCTGCGCGTGGCTTCCAACAGATCC +
Preference number: 5 (lower is better)
Translates to: ALEREQYMFRMMAAA*LMPTSGLRVASNRS
Trigger: GGATCTGTTGGAAGCCACGCGCAGCCCTGAAGTGGGCATGAGGCAGGCGGCGGCCATCATCCTGAACATGTACTGCTCCCGCTCCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GCTTCCTCAGCGACCTCCGGCTGCATTCATTCAGAGCCTCCAGGCTaGCCACGTCCAGGATCTTGGAGAGGGACTGGAGCAGCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: ASSATSGCIHSEPPG*PRPGSWRGTGAAPR
Trigger: GCGAGGAGCTGCTCCAGTCCCTCTCCAAGATCCTGGACGTGGCCAGCCTGGAGGCTCTGAATGAATGCAGCCGGAGGTCGCTGAGGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTTCTACGGACCCAGCTTaGGTCCTCCAGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: GAASGSTDAPLNALRHRPSTDPA*VLQDSS
Trigger: GGAGGAGTCCTGGAGGACCAAAGCTGGGTCCGTAGA...AGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGCACACAGCGCCTTCCTaGCCGTGGGCACAAGGGACT +
Preference number: 5 (lower is better)
Translates to: QPLLQTSQVESGRPESQAHTAPS*PWAQGT
Trigger: AGTCCCTTGTGCCCACGGCAAGGAAGGCGCTGTGTG...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTACAGGGCTGGAGTCATaGAAGAGGCGGATCAAGCCC +
Preference number: 5 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPTGLES*KRRIKP
Trigger: GGGCTTGATCCGCCTCTTCAATGACTCCAGCCCTGT...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTGCCGGGGCTCCTTGTTaGCCCACCAGATCATCTTCT +
Preference number: 5 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPAGAPC*PTRSSS
Trigger: AGAAGATGATCTGGTGGGCAAACAAGGAGCCCCGGC...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp GAGAGCAGAAGGGCTGCGGCGACCCCTTCGGTGACTGTGGGGACCTaGGTGCCCTGGGAGGCCGCCTTCTCTACTGTCTGCATAAGCAAT +
Preference number: 5 (lower is better)
Translates to: ESRRAAATPSVTVGT*VPWEAAFSTVCISN
Trigger: ATTGCTTATGCAGACAGTAGAGAAGGCGGCCTCCCAGGGCACTCAGGTCCCCACAGTCACCGAAGGGGTCGCCGCAGCCCTTCTGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp CAGAGGGCCAGTGATGCTGACCACAGAGGGCCTCAGGGCATCAGCTaGGGTCAGGCGGATCACCAAGCCCAAGCCCTTGGCTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QRASDADHRGPQGIS*GQADHQAQALGCFF
Trigger: GAAGAAGCAGCCAAGGGCTTGGGCTTGGTGATCCGCCTGACCTCAGCTGATGCCCTGAGGCCCTCTGTGGTCAGCATCACTGGCCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCCGCCCCTTTGCGCTCCGCATACTTGTCCGACTCCAACAGCTGCTaGATGAGCCGCTGGATCATGCCCCCAGCATCCTCCTTGACAGCA +
Preference number: 5 (lower is better)
Translates to: AAPLRSAYLSDSNSC*MSRWIMPPASSLTA
Trigger: TGCTGTCAAGGAGGATGCTGGGGGCATGATCCAGCGGCTCATGCAGCAGCTGTTGGAGTCGGACAAGTATGCGGAGCGCAAAGGGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp TTCTTGTCCTGGATAGCATCAGTCAGCGCGGCCATCATCTCCTGCTaGTTCAGGGAGAGGATGCCCAGGCCCTTGACCAGGCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: FLSWIASVSAAIISC*FRERMPRPLTRPAS
Trigger: GCTGGCGGGCCTGGTCAAGGGCCTGGGCATCCTCTCCCTGAAGCAGCAGGAGATGATGGCCGCGCTGACTGATGCTATCCAGGACAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GTTGGGCAGGCAGGACGACAGCTGCTTAGGTGCACAGTACGCCATTaGCCCGAGCAGCTCTACGGACCCAGCTTTGGTCCTCCAGGACTC +
Preference number: 5 (lower is better)
Translates to: VGQAGRQLLRCTVRH*PEQLYGPSFGPPGL
Trigger: GAGTCCTGGAGGACCAAAGCTGGGTCCGTAGAGCTGCTCGGGGCAATGGCGTACTGTGCACCTAAGCAGCTGTCGTCCTGCCTGCCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp AGGAACGGGAGAATGTCCTCCAAAGCCTGGTGGCCAATGGTGGAGTaGAGCTGCTCAAAGGTCTTGGCTGCCGCCTCCCGGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RNGRMSSKAWWPMVE*SCSKVLAAASRTSS
Trigger: GGAGGAGGTCCGGGAGGCGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTTTGGAGGACATTCTCCCGTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GTCAGGCGGATCACCAAGCCCAAGCCCTTGGCTGCTTCTTCCTTCTaGTCAGGACTGCCAGTGAGGACCCCTTCCCGCAGCACTGGAAGG +
Preference number: 5 (lower is better)
Translates to: VRRITKPKPLAASSF*SGLPVRTPSRSTGR
Trigger: CCTTCCAGTGCTGCGGGAAGGGGTCCTCACTGGCAGTCCTGAGCAGAAGGAAGAAGCAGCCAAGGGCTTGGGCTTGGTGATCCGCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp CTGGGAGCCACATTCACAGCCACGGACAGCGCCAAGCTCCGGCCGTaGCGAACCATCCAGTCAATGCCAGATACGTCAGCTAGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: LGATFTATDSAKLRP*RTIQSMPDTSASRH
Trigger: GTGCCTGCTAGCTGACGTATCTGGCATTGACTGGATGGTTCGGCACGGCCGGAGCTTGGCGCTGTCCGTGGCTGTGAATGTGGCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GGCCAAAGAGAGTGGGCAGGATCTCTCGCAGGGTGCGGGGAGTGTTaGAGACGACAATCTTCCACACGTGCAGCGACGCCTGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: GQREWAGSLAGCGEC*RRQSSTRAATPASP
Trigger: TGGTGAGGCAGGCGTCGCTGCACGTGTGGAAGATTGTCGTCTCCAACACTCCCCGCACCCTGCGAGAGATCCTGCCCACTCTCTTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCCAGCGTCCAGCTTCTaGGTGATGGCATTGAGAGCG +
Preference number: 5 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGPASSF*VMALRA
Trigger: CGCTCTCAATGCCATCACCAAGAAGCTGGACGCTGG...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp AAACTTGGTGTCCAGCAGGGTCTGCAGGCACTTCTGGGTCTTCCGTaGTGGGTCTGTCAGGGCATCCAGCAGGACCGGGGCAATGGCGAG +
Preference number: 5 (lower is better)
Translates to: KLGVQQGLQALLGLP*WVCQGIQQDRGNGE
Trigger: CTCGCCATTGCCCCGGTCCTGCTGGATGCCCTGACAGACCCATCACGGAAGACCCAGAAGTGCCTGCAGACCCTGCTGGACACCAAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp GAGCATCGCCAGCCACAGAGGACAGGAAAGCCAGCACCCGGGTATTaGCGGGTGGTGTTGTCAGCTTGGGCACCAGATAGGGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: EHRQPQRTGKPAPGY*RVVLSAWAPDRAAP
Trigger: TGGTGCTGCCCTATCTGGTGCCCAAGCTGACAACACCACCCGTCAATACCCGGGTGCTGGCTTTCCTGTCCTCTGTGGCTGGCGATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp AGCCCAAGCCCTTGGCTGCTTCTTCCTTCTGCTCAGGACTGCCAGTaGGGACCCCTTCCCGCAGCACTGGAAGGATGGAGGTTACTCCCC +
Preference number: 5 (lower is better)
Translates to: SPSPWLLLPSAQDCQ*GPLPAALEGWRLLP
Trigger: GGGGAGTAACCTCCATCCTTCCAGTGCTGCGGGAAGGGGTCCTCACTGGCAGTCCTGAGCAGAAGGAAGAAGCAGCCAAGGGCTTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCATCTAGTAGTCCAAGTGCCGCCTCTAGTTCCCCGTCCAGCTCCTaGAGCCGCCTCCGGATTTGTGCCTCCTTGTCCATCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: ASSSPSAASSSPSSS*SRLRICASLSIWAC
Trigger: GCAAGCCCAGATGGACAAGGAGGCACAAATCCGGAGGCGGCTGCAGGAGCTGGACGGGGAACTAGAGGCGGCACTTGGACTACTAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp TGCCACCGCCTGGGAAAGGGCTTCAGCCCCGGCCTGCCTCACGGCTaGCTCGTGATAGATCACGTCATCGATCAGCAAAGAGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: CHRLGKGFSPGLPHG*LVIDHVIDQQRAEI
Trigger: GATCTCTGCTCTTTGCTGATCGATGACGTGATCTATCACGAGGCAGCCGTGAGGCAGGCCGGGGCTGAAGCCCTTTCCCAGGCGGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp TTCTTCTTGTCCTGGATAGCATCAGTCAGCGCGGCCATCATCTCCTaGTGCTTCAGGGAGAGGATGCCCAGGCCCTTGACCAGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: FFLSWIASVSAAIIS*CFRERMPRPLTRPA
Trigger: GGCGGGCCTGGTCAAGGGCCTGGGCATCCTCTCCCTGAAGCAGCAGGAGATGATGGCCGCGCTGACTGATGCTATCCAGGACAAGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GATCTTCTCCCCGAGCTTGCGGACGAGGTCGCCCAGCGTCCTCGCTaGGATCGTTCTCTTATCTGCACACGTGCTAGCCAGGAAACCCAG +
Preference number: 5 (lower is better)
Translates to: DLLPELADEVAQRPR*DRSLICTRASQETQ
Trigger: CTGGGTTTCCTGGCTAGCACGTGTGCAGATAAGAGAACGATCGCAGCGAGGACGCTGGGCGACCTCGTCCGCAAGCTCGGGGAGAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CGCTCCGCATACTTGTCCGACTCCAACAGCTGCTGCATGAGCCGCTaGATCATGCCCCCAGCATCCTCCTTGACAGCAGGCACGAGAGGT +
Preference number: 5 (lower is better)
Translates to: RSAYLSDSNSCCMSR*IMPPASSLTAGTRG
Trigger: ACCTCTCGTGCCTGCTGTCAAGGAGGATGCTGGGGGCATGATCCAGCGGCTCATGCAGCAGCTGTTGGAGTCGGACAAGTATGCGGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCGGGTTCTGCAGACACTaGATGAGAAGGCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: QAQHQAALMPRSMPSDTGGFCRH*MRRLES
Trigger: GCTCTCCAGCCTTCTCATCAAGTGTCTGCAGAACCC...GCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp TGTACTGCCACTAAGGACGGGTGGTGGGAGATGATTAGCATCTCCTaGGCCAGCTGCTCAGTGCTGGGGATGTCGCCCTTGAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: CTATKDGWWEMISIS*ASCSVLGMSPLSPG
Trigger: GCCAGGGCTCAAGGGCGACATCCCCAGCACTGAGCAGCTGGCTCAGGAGATGCTAATCATCTCCCACCACCCGTCCTTAGTGGCAGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp TATGCCGCCCCTTTGCGCTCCGCATACTTGTCCGACTCCAACAGCTaGTGCATGAGCCGCTGGATCATGCCCCCAGCATCCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: YAAPLRSAYLSDSNS*CMSRWIMPPASSLT
Trigger: TGTCAAGGAGGATGCTGGGGGCATGATCCAGCGGCTCATGCAGCAGCTGTTGGAGTCGGACAAGTATGCGGAGCGCAAAGGGGCGGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GAGCTTGGGCACAATGTTGGGCAGGCAGGACGACAGCTGCTTAGGTaGACAGTACGCCATTGCCCCGAGCAGCTCTACGGACCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: ELGHNVGQAGRQLLR*TVRHCPEQLYGPSF
Trigger: AAAGCTGGGTCCGTAGAGCTGCTCGGGGCAATGGCGTACTGTGCACCTAAGCAGCTGTCGTCCTGCCTGCCCAACATTGTGCCCAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp AACCCAGTAGGAGGCCAAAGAGAGTGGGCAGGATCTCTCGCAGGGTaGGGGGAGTGTTGGAGACGACAATCTTCCACACGTGCAGCGACG +
Preference number: 5 (lower is better)
Translates to: NPVGGQREWAGSLAG*GECWRRQSSTRAAT
Trigger: CGTCGCTGCACGTGTGGAAGATTGTCGTCTCCAACACTCCCCGCACCCTGCGAGAGATCCTGCCCACTCTCTTTGGCCTCCTACTGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp CGGCTGGTGGACTTCATGATCTCGCTGAGCCCGATGCACACGCCCTaGCTCTCGTCGCTCTTCTGCGACCTTAGTCCTTCTTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: RLVDFMISLSPMHTP*LSSLFCDLSPSSRM
Trigger: CATCCTGGAAGAAGGACTAAGGTCGCAGAAGAGCGACGAGAGGCAGGGCGTGTGCATCGGGCTCAGCGAGATCATGAAGTCCACCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CTACTCTTGCTGGGAACACATGCTTTGGAGCCAACCCCTGAAGACTaGAGAGAGTGCAGGAGGTTCTTGGCGGTGGCCTCTGGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LLLLGTHALEPTPED*RECRRFLAVASGWA
Trigger: GGCCCAGCCAGAGGCCACCGCCAAGAACCTCCTGCACTCTCTCCAGTCTTCAGGGGTTGGCTCCAAAGCATGTGTTCCCAGCAAGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GGTTGCGAAGCGCCAGGACCGCTTCATCCATCAGGCGGGGGCTGTTaGACTTCAGCTGATTTGCCAAGCCTTTCACGATGTCCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: GCEAPGPLHPSGGGC*TSADLPSLSRCPGR
Trigger: ACGCCCTGGACATCGTGAAAGGCTTGGCAAATCAGCTGAAGTCCAACAGCCCCCGCCTGATGGATGAAGCGGTCCTGGCGCTTCGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp TGGTTAGCTTTCCTTCTGAGCCTCCAAGGATCGCAAACAGGTGCTTaGTCAGGGCCTCAGTGGCGGAGGAGTCACTGCACTGGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: WLAFLLSLQGSQTGA*SGPQWRRSHCTGGP
Trigger: TGGCCCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACCTGTTTGCGATCCTTGGAGGCTCAGAAGGAAAGCTAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp TCTGCCTCTTCTCATCCACAACCAGCTGCCAAAAGCCGCTCAGCTTaGCCTCGGCCTGGGCGTCAGCCACAGACAGCTTGGAGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: SASSHPQPAAKSRSA*PRPGRQPQTAWRAE
Trigger: TTCTGCTCTCCAAGCTGTCTGTGGCTGACGCCCAGGCCGAGGCCAAGCTGAGCGGCTTTTGGCAGCTGGTTGTGGATGAGAAGAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp TCCAGCTCCTGCAGCCGCCTCCGGATTTGTGCCTCCTTGTCCATCTaGGCTTGCAGCATCTCCTTCTGCTTGCTGGTCAGCTGTACCTCC +
Preference number: 5 (lower is better)
Translates to: SSSCSRLRICASLSI*ACSISFCLLVSCTS
Trigger: GGAGGTACAGCTGACCAGCAAGCAGAAGGAGATGCTGCAAGCCCAGATGGACAAGGAGGCACAAATCCGGAGGCGGCTGCAGGAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CACAGGCAGCTCCTCCTGGCACCAGGACTTATCCAGAGCACACTCTaGCTTCAGCAGGCGCAGGGTCACATGACTCACCAAGGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: HRQLLLAPGLIQSTL*LQQAQGHMTHQGAQ
Trigger: TTGGGCACCTTGGTGAGTCATGTGACCCTGCGCCTGCTGAAGCCAGAGTGTGCTCTGGATAAGTCCTGGTGCCAGGAGGAGCTGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp AGCAGCAGGGCAATAGCTGTCTCAGCGTACATCGAGATGACCCGCTaGCCGGCACGCAGGGCGGTGTCACGAACGAACTCGTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: SSRAIAVSAYIEMTR*PARRAVSRTNSFSS
Trigger: TGATGAGAACGAGTTCGTTCGTGACACCGCCCTGCGTGCCGGCCAGCGGGTCATCTCGATGTACGCTGAGACAGCTATTGCCCTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp TCAGTAGGAACGGGAGAATGTCCTCCAAAGCCTGGTGGCCAATGGTaGAGTGCAGCTGCTCAAAGGTCTTGGCTGCCGCCTCCCGGACCT +
Preference number: 5 (lower is better)
Translates to: SVGTGECPPKPGGQW*SAAAQRSWLPPPGP
Trigger: AGGTCCGGGAGGCGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTTTGGAGGACATTCTCCCGTTCCTACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GCTTCAGTAGGAACGGGAGAATGTCCTCCAAAGCCTGGTGGCCAATaGTGGAGTGCAGCTGCTCAAAGGTCTTGGCTGCCGCCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: ASVGTGECPPKPGGQ*WSAAAQRSWLPPPG
Trigger: TCCGGGAGGCGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTTTGGAGGACATTCTCCCGTTCCTACTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAAGCCAGGCGACCGCGTCCATCTCTTaGTGGTTCGTGCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: QPLLQTSQVESGRPESQATASIS*WFVQNC
Trigger: GCAGTTCTGCACGAACCACAAAGAGATGGACGCGGT...CGCCTGGCTTTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGCATCTCCTTCTGCTaGCTGGTCAGCTGTACCTCC +
Preference number: 5 (lower is better)
Translates to: KPGAASGSTDAPLNALRHSISFC*LVSCTS
Trigger: GGAGGTACAGCTGACCAGCAAGCAGAAGGAGATGCT...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAACGGATTTGTGCCTCCTaGTCCATCTGGGCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: RTGQPLLQTSQVESGRPERICAS*SIWACS
Trigger: GCTGCAAGCCCAGATGGACAAGGAGGCACAAATCCG...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp CGTGTACCAAGGTACCTTCGTGCACTTCCTGCTGCAGGAAGGGGATaGACAGCTCAGCCACACAGCCATTCAGGACTTGACCCGACGGCC +
Preference number: 5 (lower is better)
Translates to: RVPRYLRALPAAGRG*TAQPHSHSGLDPTA
Trigger: GGCCGTCGGGTCAAGTCCTGAATGGCTGTGTGGCTGAGCTGTTCATCCCCTTCCTGCAGCAGGAAGTGCACGAAGGTACCTTGGTACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp AGCCTTTGCAGACACGGTGCGCACCTCAGGGACAGGGTCCAAGAGTaGAGCTTTCAGGCCAGGTGTCACACTGGGCAGGTAAGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: SLCRHGAHLRDRVQE*SFQARCHTGQVRSQ
Trigger: TTGGCTCCTTACCTGCCCAGTGTGACACCTGGCCTGAAAGCTTCACTCTTGGACCCTGTCCCTGAGGTGCGCACCGTGTCTGCAAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp CCAGCTGCTCGTCTGGAGTCCCAAGCTTCTCCTTCAGTGCTAACATaGCAGCTGGGAGGATCACGCCAAGGTGTCGGGTCAGAGCATCGC +
Preference number: 5 (lower is better)
Translates to: PAARLESQASPSVLT*QLGGSRQGVGSEHR
Trigger: GCGATGCTCTGACCCGACACCTTGGCGTGATCCTCCCAGCTGTCATGTTAGCACTGAAGGAGAAGCTTGGGACTCCAGACGAGCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp ACTTCTGTGAGCTTGGGCACAATGTTGGGCAGGCAGGACGACAGCTaGTTAGGTGCACAGTACGCCATTGCCCCGAGCAGCTCTACGGAC +
Preference number: 5 (lower is better)
Translates to: TSVSLGTMLGRQDDS*LGAQYAIAPSSSTD
Trigger: GTCCGTAGAGCTGCTCGGGGCAATGGCGTACTGTGCACCTAAGCAGCTGTCGTCCTGCCTGCCCAACATTGTGCCCAAGCTCACAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GGGGCAATGGCGAGAATCTCCGGGTTTCTGATGACAGAGCCAATCTaGCTGAGGGCCTGCTGTCCAGCCTTCTGCACTTTGACGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GAMARISGFLMTEPI*LRACCPAFCTLTWE
Trigger: CTCCCACGTCAAAGTGCAGAAGGCTGGACAGCAGGCCCTCAGGCAGATTGGCTCTGTCATCAGAAACCCGGAGATTCTCGCCATTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp ACCTCAGCCAACCCTTGGGCAGCGCCTGAGCGATCCACGGAGCTCTaGTCGTACGTCAGAGTCTCCATCAGCCATGGCAGCAAATCTTCA +
Preference number: 5 (lower is better)
Translates to: TSANPWAAPERSTEL*SYVRVSISHGSKSS
Trigger: TGAAGATTTGCTGCCATGGCTGATGGAGACTCTGACGTACGAGCAGAGCTCCGTGGATCGCTCAGGCGCTGCCCAAGGGTTGGCTGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GGGCAGGTAGTTGAACATCATGATGTAGCCGTCGCGGACGTGGGGTaGGATGTCCACTTTGCTGGCTGTGGCCACGATCTCTGGCATCAG +
Preference number: 5 (lower is better)
Translates to: GQVVEHHDVAVADVG*DVHFAGCGHDLWHQ
Trigger: CTGATGCCAGAGATCGTGGCCACAGCCAGCAAAGTGGACATCGCACCCCACGTCCGCGACGGCTACATCATGATGTTCAACTACCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp ATCTCGCTGAGCCCGATGCACACGCCCTGCCTCTCGTCGCTCTTCTaGGACCTTAGTCCTTCTTCCAGGATGGGGATGATCTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: ISLSPMHTPCLSSLF*DLSPSSRMGMISGR
Trigger: CCTTCCTGAGATCATCCCCATCCTGGAAGAAGGACTAAGGTCGCAGAAGAGCGACGAGAGGCAGGGCGTGTGCATCGGGCTCAGCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GGCACTGCACCTCCACCAGCTTGTTCCAGATGTCTCCTTGCCGCTTaGCCTTCAGGGGAAAGACAATTCGCACTAGGAGGCAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GTAPPPACSRCLLAA*PSGERQFALGGRSR
Trigger: CCTGGACCTGCCTCCTAGTGCGAATTGTCTTTCCCCTGAAGGCCAAGCGGCAAGGAGACATCTGGAACAAGCTGGTGGAGGTGCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GCTGCCATCTTTCGTGTGTCTGTGGAGCGGTCCTGGAAGGCTCTCTaGACAATGGGCATGATGAGCGCCAGGGACGGGGCATCAATGAAG +
Preference number: 5 (lower is better)
Translates to: AAIFRVSVERSWKAL*TMGMMSARDGASMK
Trigger: CTTCATTGATGCCCCGTCCCTGGCGCTCATCATGCCCATTGTCCAGAGAGCCTTCCAGGACCGCTCCACAGACACACGAAAGATGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp TCCAGCTGCTTCAGTAGGAACGGGAGAATGTCCTCCAAAGCCTGGTaGCCAATGGTGGAGTGCAGCTGCTCAAAGGTCTTGGCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: SSCFSRNGRMSSKAW*PMVECSCSKVLAAA
Trigger: GGCGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTTTGGAGGACATTCTCCCGTTCCTACTGAAGCAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp TCATGTCCTGAACCTCATTGCTGTATCTGCCTGCACACAGTCTGCTaGGAGCCACATTCACAGCCACGGACAGCGCCAAGCTCCGGCCGT +
Preference number: 5 (lower is better)
Translates to: SCPEPHCCICLHTVC*EPHSQPRTAPSSGR
Trigger: ACGGCCGGAGCTTGGCGCTGTCCGTGGCTGTGAATGTGGCTCCCAGCAGACTGTGTGCAGGCAGATACAGCAATGAGGTTCAGGACATGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AACAGTGTGAACACAGACGAGGGGCAGCGTGGCTGCGGCTGGCGGGACCAGCCTTTGGGAGGCTTGGCTTaGCTCATCAGAATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: NSVNTDEGQRGCGWRDQPLGGLA*LIRMFF
Trigger: GAAGAACATTCTGATGAGCAAAGCCAAGCCTCCCAA...AGGCTGGTCCCGCCAGCCGCAGCCACGCTGCCCCTCGTCTGTGTTCACACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCACTTGTCCATCTGGGCTaGCAGCATCTCCTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: QHQAALMPRSMPSDTGLPLVHLG*QHLLLL
Trigger: AAGCAGAAGGAGATGCTGCAAGCCCAGATGGACAAG...TGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AAGCCAGGCGCAGCATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACTTGCTCATCACAGCTTaGGCACAGTCATCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: KPGAASGSTDAPLNALRHLLITA*AQSSAA
Trigger: GGCTGCAGATGACTGTGCCAAAGCTGTGATGAGCAA...GTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATGCTGCGCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTTTCTTGGTGATGGCATaGAGAGCGTCCCAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSFLVMA*RASQLS
Trigger: GGAGAGCTGGGACGCTCTCAATGCCATCACCAAGAA...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGTCGCCCCGCCTCATCTaGAGCAGGTTCACGATGGCC +
Preference number: 5 (lower is better)
Translates to: LLNLLRMACTPSPGAEEESPRLI*SRFTMA
Trigger: GGCCATCGTGAACCTGCTCAAGATGAGGCGGGGCGA...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp GCACAGCCACCAGGACCCGATAGTACTGCTGGACTTTGCTGTTGGTaGGCCTGTGAGGGTGGTCAAGGAAAAGCCTCTCCGTCAGACGCA +
Preference number: 5 (lower is better)
Translates to: AQPPGPDSTAGLCCW*ACEGGQGKASPSDA
Trigger: TGCGTCTGACGGAGAGGCTTTTCCTTGACCACCCTCACAGGCTCACCAACAGCAAAGTCCAGCAGTACTATCGGGTCCTGGTGGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp CCAGGACAGGGATGTACTGAATCAGGCCACACGGGTTCCTGGCCATaGTGGCATCTAGTAGTCCAAGTGCCGCCTCTAGTTCCCCGTCCA +
Preference number: 5 (lower is better)
Translates to: PGQGCTESGHTGSWP*WHLVVQVPPLVPRP
Trigger: TGGACGGGGAACTAGAGGCGGCACTTGGACTACTAGATGCCATCATGGCCAGGAACCCGTGTGGCCTGATTCAGTACATCCCTGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp GACTTATCCAGAGCACACTCTGGCTTCAGCAGGCGCAGGGTCACATaGCTCACCAAGGTGCCCAAGGTCTTGAGTCTCGGGGGCATGACA +
Preference number: 5 (lower is better)
Translates to: DLSRAHSGFSRRRVT*LTKVPKVLSLGGMT
Trigger: TGTCATGCCCCCGAGACTCAAGACCTTGGGCACCTTGGTGAGTCATGTGACCCTGCGCCTGCTGAAGCCAGAGTGTGCTCTGGATAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp TCTCGTCGCTCTTCTGCGACCTTAGTCCTTCTTCCAGGATGGGGATaGTCTCAGGAAGGATCTTCTCCCCGAGCTTGCGGACGAGGTCGC +
Preference number: 5 (lower is better)
Translates to: SRRSSATLVLLPGWG*SQEGSSPRACGRGR
Trigger: GCGACCTCGTCCGCAAGCTCGGGGAGAAGATCCTTCCTGAGATCATCCCCATCCTGGAAGAAGGACTAAGGTCGCAGAAGAGCGACGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp AGCAGCAGGCACTGCACCTCCACCAGCTTGTTCCAGATGTCTCCTTaGCGCTTGGCCTTCAGGGGAAAGACAATTCGCACTAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSRHCTSTSLFQMSP*RLAFRGKTIRTRRQ
Trigger: CTGCCTCCTAGTGCGAATTGTCTTTCCCCTGAAGGCCAAGCGGCAAGGAGACATCTGGAACAAGCTGGTGGAGGTGCAGTGCCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp ATGATGGTTAGCTTTCCTTCTGAGCCTCCAAGGATCGCAAACAGGTaGTTGGTCAGGGCCTCAGTGGCGGAGGAGTCACTGCACTGGCGG +
Preference number: 5 (lower is better)
Translates to: MMVSFPSEPPRIANR*LVRASVAEESLHWR
Trigger: CCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACCTGTTTGCGATCCTTGGAGGCTCAGAAGGAAAGCTAACCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp CTGATGACAGAGCCAATCTGCCTGAGGGCCTGCTGTCCAGCCTTCTaGACTTTGACGTGGGAGTCTGTCAGCACTTCTGTGAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LMTEPICLRACCPAF*TLTWESVSTSVSLG
Trigger: GCCCAAGCTCACAGAAGTGCTGACAGACTCCCACGTCAAAGTGCAGAAGGCTGGACAGCAGGCCCTCAGGCAGATTGGCTCTGTCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp ACCCAGCTGTGGAGATCCGAGTGTTGTCCTCGTCATGGCCCAGCATaGTCAGCAGGAGCGAGACCAGGTTTTTCCGAATGGCAGCATCCA +
Preference number: 5 (lower is better)
Translates to: TQLWRSECCPRHGPA*SAGARPGFSEWQHP
Trigger: TGGATGCTGCCATTCGGAAAAACCTGGTCTCGCTCCTGCTGAGCATGCTGGGCCATGACGAGGACAACACTCGGATCTCCACAGCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CCAGCAAGGCAGCTGAGCCGCTACTCTTGCTGGGAACACATGCTTTaGAGCCAACCCCTGAAGACTGGAGAGAGTGCAGGAGGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: PARQLSRYSCWEHML*SQPLKTGESAGGSW
Trigger: CCAAGAACCTCCTGCACTCTCTCCAGTCTTCAGGGGTTGGCTCCAAAGCATGTGTTCCCAGCAAGAGTAGCGGCTCAGCTGCCTTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CCAATCTGCCTGAGGGCCTGCTGTCCAGCCTTCTGCACTTTGACGTaGGAGTCTGTCAGCACTTCTGTGAGCTTGGGCACAATGTTGGGC +
Preference number: 5 (lower is better)
Translates to: PICLRACCPAFCTLT*ESVSTSVSLGTMLG
Trigger: GCCCAACATTGTGCCCAAGCTCACAGAAGTGCTGACAGACTCCCACGTCAAAGTGCAGAAGGCTGGACAGCAGGCCCTCAGGCAGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAAGTCAAGCAGAACAACTaGCAGAGCCCTTTCACGGCT +
Preference number: 5 (lower is better)
Translates to: RTGQPLLQTSQVESGRPEVKQNN*QSPFTA
Trigger: AGCCGTGAAAGGGCTCTGCAAGTTGTTCTGCTTGAC...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGTTCCAGATGTCTCCTaGCCGCTTGGCCTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: PLLNLLRMACTPSPGAEEVPDVS*PLGLQG
Trigger: CCCCTGAAGGCCAAGCGGCAAGGAGACATCTGGAAC...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGATCGCAAACAGGTGCTaGGTCAGGGCCTCAGTGGCG +
Preference number: 5 (lower is better)
Translates to: LLNLLRMACTPSPGAEEEIANRC*VRASVA
Trigger: CGCCACTGAGGCCCTGACCAAGCACCTGTTTGCGAT...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTACTTTGGGGTCACTCTaGTCCAGGTGTTTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSTLGSL*SRCLAR
Trigger: TCTGGCCAAACACCTGGACAAGAGTGACCCCAAAGT...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCAGGATGCCCAGGCCCTaGACCAGGCCCGCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPRMPRP*TRPASP
Trigger: CGGGCTGGCGGGCCTGGTCAAGGGCCTGGGCATCCT...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATAGGGTGCGGGGAGTGTaGGAGACGACAATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDRVRGV*ETTIFH
Trigger: GTGGAAGATTGTCGTCTCCAACACTCCCCGCACCCT...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGACCGCGCGGATGCCGTaGAGCAGCTCTGTAAAGAGG +
Preference number: 5 (lower is better)
Translates to: PLLNLLRMACTPSPGAEETARMP*SSSVKR
Trigger: CCTCTTTACAGAGCTGCTCAACGGCATCCGCGCGGT...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp CTCCCTCTGGCAGATCTTTGCCGGCGATGCATCGCCCCAGTTCACTaGGAATCTCTCTCCGCTCCTTCACACTGGCTGTTGTCACCTTCA +
Preference number: 5 (lower is better)
Translates to: LPLADLCRRCIAPVH*ESLSAPSHWLLSPS
Trigger: TGAAGGTGACAACAGCCAGTGTGAAGGAGCGGAGAGAGATTCTCAGTGAACTGGGGCGATGCATCGCCGGCAAAGATCTGCCAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp TGCACAGGGCGTCCTCTGAAGCCAGGAGCAGGAACTTCTCAGACGTaGAAGTCTGCCTCTTCTCATCCACAACCAGCTGCCAAAAGCCGC +
Preference number: 5 (lower is better)
Translates to: CTGRPLKPGAGTSQT*KSASSHPQPAAKSR
Trigger: GCGGCTTTTGGCAGCTGGTTGTGGATGAGAAGAGGCAGACTTTCACGTCTGAGAAGTTCCTGCTCCTGGCTTCAGAGGACGCCCTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp ACCTCCCCAGCGTCCGTCACAAGAGCCTCCAAGGGAAGCACCTTGTaGGAGTTGAGGACAGTCTTCAGTTCGTCCAAGAGACCATTGGCC +
Preference number: 5 (lower is better)
Translates to: TSPASVTRASKGSTL*ELRTVFSSSKRPLA
Trigger: GGCCAATGGTCTCTTGGACGAACTGAAGACTGTCCTCAACTCTCACAAGGTGCTTCCCTTGGAGGCTCTTGTGACGGACGCTGGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp TGGACAATGGGCATGATGAGCGCCAGGGACGGGGCATCAATGAAGTaGACAAACTTGGTGTCCAGCAGGGTCTGCAGGCACTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: WTMGMMSARDGASMK*TNLVSSRVCRHFWV
Trigger: GACCCAGAAGTGCCTGCAGACCCTGCTGGACACCAAGTTTGTTCACTTCATTGATGCCCCGTCCCTGGCGCTCATCATGCCCATTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp CAACAGATCCTCGATGATGATCCGGTGCCCAGTGTCATCCTCCACTaGGAGGATCACAGCCTGACAGTTGGCCATCTCCAGCTGCTCGTC +
Preference number: 5 (lower is better)
Translates to: QQILDDDPVPSVILH*EDHSLTVGHLQLLV
Trigger: GACGAGCAGCTGGAGATGGCCAACTGTCAGGCTGTGATCCTCTCAGTGGAGGATGACACTGGGCACCGGATCATCATCGAGGATCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp ACCTCGGAAGGAGGCCAGCATGCACTGCAGGTAGGCGTGCCGCACTaGAGAGGTGGACGTTTTAAGGCTGAAGACTTTCTTGAACCAGTC +
Preference number: 5 (lower is better)
Translates to: TSEGGQHALQVGVPH*RGGRFKAEDFLEPV
Trigger: GACTGGTTCAAGAAAGTCTTCAGCCTTAAAACGTCCACCTCTGCAGTGCGGCACGCCTACCTGCAGTGCATGCTGGCCTCCTTCCGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCACTCTGGATGATGGATTTATCAAACAGCTCCCCGGCAGGGGTCTaGATGATGGAGAACTCCTCCCGAGTCACAAGGCACAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: ALWMMDLSNSSPAGV*MMENSSRVTRHRAG
Trigger: TCCTGCCCTGTGCCTTGTGACTCGGGAGGAGTTCTCCATCATGCAGACCCCTGCCGGGGAGCTGTTTGATAAATCCATCATCCAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GAAGCCCATGCCTCGAATCCCACTCATGGCGATGGGGATCCTGTCTaGCACGGCGTTGCTGAGGATCATGTCCTGAACCTCATTGCTGTA +
Preference number: 5 (lower is better)
Translates to: EAHASNPTHGDGDPV*HGVAEDHVLNLIAV
Trigger: TACAGCAATGAGGTTCAGGACATGATCCTCAGCAACGCCGTGGCAGACAGGATCCCCATCGCCATGAGTGGGATTCGAGGCATGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CAGGGACAGGGTCCAAGAGTGAAGCTTTCAGGCCAGGTGTCACACTaGGCAGGTAAGGAGCCAAGTCCTTCTGGTCTGTCAGGGAGTACA +
Preference number: 5 (lower is better)
Translates to: QGQGPRVKLSGQVSH*AGKEPSPSGLSGST
Trigger: TGTACTCCCTGACAGACCAGAAGGACTTGGCTCCTTACCTGCCCAGTGTGACACCTGGCCTGAAAGCTTCACTCTTGGACCCTGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GCGATCCACGGAGCTCTGCTCGTACGTCAGAGTCTCCATCAGCCATaGCAGCAAATCTTCAAAGCACGACTCCCCCATGCCCTTCACCAT +
Preference number: 5 (lower is better)
Translates to: AIHGALLVRQSLHQP*QQIFKARLPHALHH
Trigger: ATGGTGAAGGGCATGGGGGAGTCGTGCTTTGAAGATTTGCTGCCATGGCTGATGGAGACTCTGACGTACGAGCAGAGCTCCGTGGATCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp AGGACTGGGCAGCCTCTTCTCCAGACAAGCCAGGTAGAGTCAGGCCGCCCAGAACAGTCCGTAAGCTTCTaGGGCACTTCTGTAGTGAAC +
Preference number: 5 (lower is better)
Translates to: RTGQPLLQTSQVESGRPEQSVSF*GTSVVN
Trigger: GTTCACTACAGAAGTGCCCAAGAAGCTTACGGACTG...TTCTGGGCGGCCTGACTCTACCTGGCTTGTCTGGAGAAGAGGCTGCCCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGCCAGCCTTCTGCACTTaGACGTGGGAGTCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: PLLNLLRMACTPSPGAEEPAFCT*TWESVS
Trigger: GCTGACAGACTCCCACGTCAAAGTGCAGAAGGCTGG...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATAAGAGGGGGTCCACCTaGACGTGGATGGAAATGAGC +
Preference number: 5 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDKRGST*TWMEMS
Trigger: GCTCATTTCCATCCACGTCAAGGTGGACCCCCTCTT...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GAGAGGCTGCGTCTCTATATCGATGCAGTGTCAAGCAGAACAACTTaGAGAGCCCTTTCACGGCTCCCTCTGGCAGATCTTTGCCGGCGA +
Preference number: 5 (lower is better)
Translates to: ERLRLYIDAVSSRTT*RALSRLPLADLCRR
Trigger: TCGCCGGCAAAGATCTGCCAGAGGGAGCCGTGAAAGGGCTCTGCAAGTTGTTCTGCTTGACACTGCATCGATATAGAGACGCAGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCCTTCTCTACTGTCTGCATAAGCAATGGCAGAAAGTCCAAGGCCTaGAACAGTGTGTCACCTCGGAAGGAGGCCAGCATGCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: AFSTVCISNGRKSKA*NSVSPRKEASMHCR
Trigger: CCTGCAGTGCATGCTGGCCTCCTTCCGAGGTGACACACTGTTGCAGGCCTTGGACTTTCTGCCATTGCTTATGCAGACAGTAGAGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCGTCCTCTGAAGCCAGGAGCAGGAACTTCTCAGACGTGAAAGTCTaGCTCTTCTCATCCACAACCAGCTGCCAAAAGCCGCTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ASSEARSRNFSDVKV*LFSSTTSCQKPLSL
Trigger: CAAGCTGAGCGGCTTTTGGCAGCTGGTTGTGGATGAGAAGAGGCAGACTTTCACGTCTGAGAAGTTCCTGCTCCTGGCTTCAGAGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp AGAATCTCCGGGTTTCTGATGACAGAGCCAATCTGCCTGAGGGCCTaGTGTCCAGCCTTCTGCACTTTGACGTGGGAGTCTGTCAGCACT +
Preference number: 5 (lower is better)
Translates to: RISGFLMTEPICLRA*CPAFCTLTWESVST
Trigger: AGTGCTGACAGACTCCCACGTCAAAGTGCAGAAGGCTGGACAGCAGGCCCTCAGGCAGATTGGCTCTGTCATCAGAAACCCGGAGATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CAGTGTCAAGCAGAACAACTTGCAGAGCCCTTTCACGGCTCCCTCTaGCAGATCTTTGCCGGCGATGCATCGCCCCAGTTCACTGAGAAT +
Preference number: 5 (lower is better)
Translates to: QCQAEQLAEPFHGSL*QIFAGDASPQFTEN
Trigger: ATTCTCAGTGAACTGGGGCGATGCATCGCCGGCAAAGATCTGCCAGAGGGAGCCGTGAAAGGGCTCTGCAAGTTGTTCTGCTTGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp GCACCAACTTCACACCGTGAGCACTCAAATTGCTCATCACAGCTTTaGCACAGTCATCTGCAGCCTCGCGCACGTACTGGTTCCCATCCC +
Preference number: 5 (lower is better)
Translates to: APTSHREHSNCSSQL*HSHLQPRARTGSHP
Trigger: GGGATGGGAACCAGTACGTGCGCGAGGCTGCAGATGACTGTGCCAAAGCTGTGATGAGCAATTTGAGTGCTCACGGTGTGAAGTTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTAAGTACTTGGGAGGCTaGGCTTTGCTCATCAGAATG +
Preference number: 5 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSKYLGG*ALLIRM
Trigger: CATTCTGATGAGCAAAGCCAAGCCTCCCAAGTACTT...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGAAGTACTGCGAGAGCTaGTTCAGGGCCAAGGCTAGG +
Preference number: 5 (lower is better)
Translates to: LLNLLRMACTPSPGAEEEKYCES*FRAKAR
Trigger: CCTAGCCTTGGCCCTGAACAAGCTCTCGCAGTACTT...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CATCAGGCAGCACTGATGCCCCGCTCAATGCCCTCAGACACAGGCCTCCCAAGTCTTCGGAAGTTCTTCTaGTCCTGGATAGCATCAGTC +
Preference number: 5 (lower is better)
Translates to: HQAALMPRSMPSDTGLPSLRKFF*SWIASV
Trigger: GACTGATGCTATCCAGGACAAGAAGAACTTCCGAAG...ACTTGGGAGGCCTGTGTCTGAGGGCATTGAGCGGGGCATCAGTGCTGCCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTGGTCGCTAGCTTGGGCACAATGTaGGGCAGGCAGGACGACAGC +
Preference number: 5 (lower is better)
Translates to: EAIFSCVWVGFKALALVASLGTM*GRQDDS
Trigger: GCTGTCGTCCTGCCTGCCCAACATTGTGCCCAAGCT...AGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTGGTCGCTGCCTTCAGGATGGGCTaGATGGTCTGTGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: EAIFSCVWVGFKALALVAAFRMG*MVCGSR
Trigger: CCTGGAGCCACAGACCATCAAGCCCATCCTGAAGGC...AGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp GACTTCAGCAAGGGCAGGAAGGCATCAACCAGGACAGGGATGTACTaGATCAGGCCACACGGGTTCCTGGCCATGATGGCATCTAGTAGT +
Preference number: 5 (lower is better)
Translates to: DFSKGRKASTRTGMY*IRPHGFLAMMASSS
Trigger: ACTACTAGATGCCATCATGGCCAGGAACCCGTGTGGCCTGATTCAGTACATCCCTGTCCTGGTTGATGCCTTCCTGCCCTTGCTGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp GAAGACAGAAGCCTGGCACGTGCTCCCCTTTGCATTCGTTGCCTATaGAGCGGATTTCCTTGTGGAGTTCTTCGATCAGGGCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: EDRSLARAPLCIRCL*SGFPCGVLRSGPAG
Trigger: ACCAGCTGGCCCTGATCGAAGAACTCCACAAGGAAATCCGCTTCATAGGCAACGAATGCAAAGGGGAGCACGTGCCAGGCTTCTGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp CAATGCCAGATACGTCAGCTAGCAGGCACTGCTGAAGGACAGTGTTaGGCTCTTCGTCAGTCAGAAAGGCACACAGTTCCCCAAGGCACC +
Preference number: 5 (lower is better)
Translates to: QCQIRQLAGTAEGQC*ALRQSERHTVPQGT
Trigger: GGTGCCTTGGGGAACTGTGTGCCTTTCTGACTGACGAAGAGCTCAACACTGTCCTTCAGCAGTGCCTGCTAGCTGACGTATCTGGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp CTAACAAGGACGGGAGCACCAACTTCACACCGTGAGCACTCAAATTaGTCATCACAGCTTTGGCACAGTCATCTGCAGCCTCGCGCACGT +
Preference number: 5 (lower is better)
Translates to: LTRTGAPTSHREHSN*SSQLWHSHLQPRAR
Trigger: ACGTGCGCGAGGCTGCAGATGACTGTGCCAAAGCTGTGATGAGCAATTTGAGTGCTCACGGTGTGAAGTTGGTGCTCCCGTCCTTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GTCCTTCTGGTCTGTCAGGGAGTACATGTTGCCAATAATCTGCGCTaGCATCTTTCGTGTGTCTGTGGAGCGGTCCTGGAAGGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: VLLVCQGVHVANNLR*HLSCVCGAVLEGSL
Trigger: CAGAGAGCCTTCCAGGACCGCTCCACAGACACACGAAAGATGGCAGCGCAGATTATTGGCAACATGTACTCCCTGACAGACCAGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCCAAGTCCTTCTGGTCTGTCAGGGAGTACATGTTGCCAATAATCTaGGCTGCCATCTTTCGTGTGTCTGTGGAGCGGTCCTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: AKSFWSVREYMLPII*AAIFRVSVERSWKA
Trigger: AGCCTTCCAGGACCGCTCCACAGACACACGAAAGATGGCAGCGCAGATTATTGGCAACATGTACTCCCTGACAGACCAGAAGGACTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp ACCGGAGCAAGGGGGCACAGTTGTCCAGCAAGTACTTGGGAGGCTTaGCTTTGCTCATCAGAATGTTCTTCACGTAGAACTCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: TGARGHSCPASTWEA*LCSSECSSRRTPAG
Trigger: CCCTGCTGGAGTTCTACGTGAAGAACATTCTGATGAGCAAAGCCAAGCCTCCCAAGTACTTGCTGGACAACTGTGCCCCCTTGCTCCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CCTATGAAGCGGATTTCCTTGTGGAGTTCTTCGATCAGGGCCAGCTaGTTACCAGCGTCCAGCTTCTTGGTGATGGCATTGAGAGCGTCC +
Preference number: 5 (lower is better)
Translates to: PMKRISLWSSSIRAS*LPASSFLVMALRAS
Trigger: GGACGCTCTCAATGCCATCACCAAGAAGCTGGACGCTGGTAACCAGCTGGCCCTGATCGAAGAACTCCACAAGGAAATCCGCTTCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp ACGTGCTCCCCTTTGCATTCGTTGCCTATGAAGCGGATTTCCTTGTaGAGTTCTTCGATCAGGGCCAGCTGGTTACCAGCGTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TCSPLHSLPMKRISL*SSSIRASWLPASSF
Trigger: GAAGCTGGACGCTGGTAACCAGCTGGCCCTGATCGAAGAACTCCACAAGGAAATCCGCTTCATAGGCAACGAATGCAAAGGGGAGCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGAGTTGTCCAGCAAGTACTaGGGAGGCTTGGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: LLNLLRMACTPSPGAEEELSSKY*GGLALL
Trigger: GAGCAAAGCCAAGCCTCCCAAGTACTTGCTGGACAA...CTCCTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGGTCAGGGAGTACATGTaGCCAATAATCTGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: PLLNLLRMACTPSPGAEEVREYM*PIICAA
Trigger: GGCAGCGCAGATTATTGGCAACATGTACTCCCTGAC...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp GAATGTTCTTCACGTAGAACTCCAGCAGGGTGCTCTTATGCTGGCTaGCCGCGTCCATCTCTTTGTGGTTCGTGCAGAACTGCACCAGCA +
Preference number: 5 (lower is better)
Translates to: ECSSRRTPAGCSYAG*PRPSLCGSCRTAPA
Trigger: TGCTGGTGCAGTTCTGCACGAACCACAAAGAGATGGACGCGGTCAGCCAGCATAAGAGCACCCTGCTGGAGTTCTACGTGAAGAACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp TCATTCAGGGCATCCGGGACAAAGAACTGGAAAAGCGGCTTCACCTaGGAGCTATCCAAGTACTGCGAGAGCTTGTTCAGGGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: SFRASGTKNWKSGFT*ELSKYCESLFRAKA
Trigger: AGCCTTGGCCCTGAACAAGCTCTCGCAGTACTTGGATAGCTCTCAGGTGAAGCCGCTTTTCCAGTTCTTTGTCCCGGATGCCCTGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp TCCTCCAGGGCAGCTAACAAGGACGGGAGCACCAACTTCACACCGTaGGCACTCAAATTGCTCATCACAGCTTTGGCACAGTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: SSRAANKDGSTNFTP*ALKLLITALAQSSA
Trigger: TGCAGATGACTGTGCCAAAGCTGTGATGAGCAATTTGAGTGCTCACGGTGTGAAGTTGGTGCTCCCGTCCTTGTTAGCTGCCCTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp GCAAGGGGGCACAGTTGTCCAGCAAGTACTTGGGAGGCTTGGCTTTaGTCATCAGAATGTTCTTCACGTAGAACTCCAGCAGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: ARGHSCPASTWEAWL*SSECSSRRTPAGCS
Trigger: AGAGCACCCTGCTGGAGTTCTACGTGAAGAACATTCTGATGAGCAAAGCCAAGCCTCCCAAGTACTTGCTGGACAACTGTGCCCCCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp AGGATGGAGGTTACTCCCCTCTTTGGAAGACAGAAGCCTGGCACGTaGTCCCCTTTGCATTCGTTGCCTATGAAGCGGATTTCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: RMEVTPLFGRQKPGT*SPLHSLPMKRISLW
Trigger: CCACAAGGAAATCCGCTTCATAGGCAACGAATGCAAAGGGGAGCACGTGCCAGGCTTCTGTCTTCCAAAGAGGGGAGTAACCTCCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CATCGATCAGCAAAGAGCAGAGATCTGACTGCAGATCGAGGCCCATaGTTGACCAAAGCCTTTCGGCCAGCTTCCGTATCTCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: HRSAKSRDLTADRGP*LTKAFRPASVSHPP
Trigger: AGGAGGATGAGATACGGAAGCTGGCCGAAAGGCTTTGGTCAACCATGGGCCTCGATCTGCAGTCAGATCTCTGCTCTTTGCTGATCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp CACTGGAAGGATGGAGGTTACTCCCCTCTTTGGAAGACAGAAGCCTaGCACGTGCTCCCCTTTGCATTCGTTGCCTATGAAGCGGATTTC +
Preference number: 5 (lower is better)
Translates to: HWKDGGYSPLWKTEA*HVLPFAFVAYEADF
Trigger: GAAATCCGCTTCATAGGCAACGAATGCAAAGGGGAGCACGTGCCAGGCTTCTGTCTTCCAAAGAGGGGAGTAACCTCCATCCTTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GAGGCGATCTTCAGTTGTGTGTGGGTTGGATTTAAGGCTTTGGCTCTGGTCGCTCTGGGAACACATGCTTaGGAGCCAACCCCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: EAIFSCVWVGFKALALVALGTHA*EPTPED
Trigger: GTCTTCAGGGGTTGGCTCCAAAGCATGTGTTCCCAG...AGCGACCAGAGCCAAAGCCTTAAATCCAACCCACACACAACTGAAGATCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TGCTGCCGCTCGCTGAGGGTGGTGTGCACGCTTCTCTTTCTCTTCTCTGGAGATTGGACTTCAGCTGATTaGCCAAGCCTTTCACGATGT +
Preference number: 5 (lower is better)
Translates to: CCRSLRVVCTLLFLFSGDWTSAD*PSLSRC
Trigger: ACATCGTGAAAGGCTTGGCAAATCAGCTGAAGTCCA...ATCTCCAGAGAAGAGAAAGAGAAGCGTGCACACCACCCTCAGCGAGCGGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCGCCACGTCCAGGATCTaGGAGAGGGACTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPATSRI*ERDWSS
Trigger: GCTGCTCCAGTCCCTCTCCAAGATCCTGGACGTGGC...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp GCCTTTCACGATGTCCAGGGCGTACTGGCTGAGATCGAGTGTCACTaGAGCCAGCAGGCTGGAGATAGTTTCAATAACATTCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: AFHDVQGVLAEIECH*SQQAGDSFNNILWA
Trigger: AGCCCAGAGAATGTTATTGAAACTATCTCCAGCCTGCTGGCTTCAGTGACACTCGATCTCAGCCAGTACGCCCTGGACATCGTGAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 90 bp CGAAGTTATCATCCTCAGACGCTGTTTCCGTGGTCATCTTCCCTGTaGCCCCAGAGATGTGGAACAGGAGGTCCCCAAGAAGTTGAACAG +
Preference number: 5 (lower is better)
Translates to: RSYHPQTLFPWSSSL*PQRCGTGGPQEVEQ
Trigger: CTGTTCAACTTCTTGGGGACCTCCTGTTCCACATCTCTGGGGTCACAGGGAAGATGACCACGGAAACAGCGTCTGAGGATGATAACTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp CCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCGGAGCTGAGGAGAGGCTGAAGACTTTCTaGAACCAGTCCGTAAGCTTC +
Preference number: 5 (lower is better)
Translates to: PLLNLLRMACTPSPGAEERLKTF*NQSVSF
Trigger: GAAGCTTACGGACTGGTTCAAGAAAGTCTTCAGCCT...CTCCTCAGCTCCGGGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAGGGGGCCGGGGCTCCTaGTTTGCCCACCAGATCATC +
Preference number: 5 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPGGRGS*FAHQII
Trigger: GATGATCTGGTGGGCAAACAAGGAGCCCCGGCCCCC...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 90 bp AAGGACTTCTGTATGGTGGGCAGAATCAGATCCTTAAACTCTGAGTaGGACATGAACCGGAGCAAGGGGGCACAGTTGTCCAGCAAGTAC +
Preference number: 5 (lower is better)
Translates to: KDFCMVGRIRSLNSE*DMNRSKGAQLSSKY
Trigger: GTACTTGCTGGACAACTGTGCCCCCTTGCTCCGGTTCATGTCCCACTCAGAGTTTAAGGATCTGATTCTGCCCACCATACAGAAGTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GATGAAATCAAAGCCTTTATTAAACCTCCTTCGAATGGCCTGTACCCCAAGCCCCTCTTGTCCAGGTGTTaGGCCAGAGACCCCATGAGG +
Preference number: 5 (lower is better)
Translates to: DEIKAFIKPPSNGLYPKPLLSRC*ARDPMR
Trigger: CCTCATGGGGTCTCTGGCCAAACACCTGGACAAGAG...GGGCTTGGGGTACAGGCCATTCGAAGGAGGTTTAATAAAGGCTTTGATTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 90 bp CGGATTTGTGCCTCCTTGTCCATCTGGGCTTGCAGCATCTCCTTCTaGTTGCTGGTCAGCTGTACCTCCTCTTTTATGCCTTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: RICASLSIWACSISF*LLVSCTSSFMPFFF
Trigger: GAAAAAGAAAGGCATAAAAGAGGAGGTACAGCTGACCAGCAAGCAGAAGGAGATGCTGCAAGCCCAGATGGACAAGGAGGCACAAATCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGGTGCACAGTACGCCATaGCCCCGAGCAGCTCTACGG +
Preference number: 5 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMVHSTP*PRAALR
Trigger: CCGTAGAGCTGCTCGGGGCAATGGCGTACTGTGCAC...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAGGTGCGATGTCCACTTaGCTGGCTGTGGCCACGATC +
Preference number: 5 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPGAMST*LAVATI
Trigger: GATCGTGGCCACAGCCAGCAAAGTGGACATCGCACC...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGCCAAGCACTTCTGTGAGCTaGGGCACAATGTTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LRLWLWSLDVLKYFLGMPSTSVS*GTMLGR
Trigger: CCTGCCCAACATTGTGCCCAAGCTCACAGAAGTGCT...TGGCATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp GATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAATGACTGGCAGCAGTGAGTaGACATTCTCCTTCCCATGG +
Preference number: 5 (lower is better)
Translates to: DLRLWLWSLDVLKYFLGMTGSSE*TFSFPW
Trigger: CCATGGGAAGGAGAATGTCAACTCACTGCTGCCAGT...CATTCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS-3UTR CAA 90 bp TTGGATTTAAGGCTTTGGCTCTGGTCGCTTGATGTACTAAAATACTTTCTGGGAACAATAGGTTTAACTTaGGGGTCACTCTTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LDLRLWLWSLDVLKYFLGTIGLT*GSLLSR
Trigger: CCTGGACAAGAGTGACCCCAAAGTTAAACCTATTGT...TCCCAGAAAGTATTTTAGTACATCAAGCGACCAGAGCCAAAGCCTTAAATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CCTGCCCATAACCTCCGCTGCCTGCCGCTGGTACCGTaGCACCGCCTGGGAAAGGGCTTCAGCCCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: PAHNLRCLPLVP*HRLGKGFSPGL
Trigger: CAGGCCGGGGCTGAAGCCCTTTCCCAGGCGGTGGCACGGTACCAGCGGCAGGCAGCGGAGGTTATGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GCTTGGAGAGCAGAAGGGCTGCGGCGACCCCTTCGGTaGCTGTGGGGACCTGAGTGCCCTGGGAGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: AWRAEGLRRPLR*LWGPECPGRPP
Trigger: AGGCGGCCTCCCAGGGCACTCAGGTCCCCACAGTCACCGAAGGGGTCGCCGCAGCCCTTCTGCTCTCCAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GGTGCTTGGTCAGGGCCTCAGTGGCGGAGGAGTCACTaGACTGGCGGGCCAGGTTGCGAAGCGCCAGGACCG +
Preference number: 6 (lower is better)
Translates to: GAWSGPQWRRSH*TGGPGCEAPGP
Trigger: CGGTCCTGGCGCTTCGCAACCTGGCCCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CAAGGAGAAGGCCGGTGCAGACAGCGGGGCGGCATCTaGCTCGCCCTTGCCCACCCTGCTGGGGATGGTGTG +
Preference number: 6 (lower is better)
Translates to: QGEGRCRQRGGI*LALAHPAGDGV
Trigger: CACACCATCCCCAGCAGGGTGGGCAAGGGCGAGCCAGATGCCGCCCCGCTGTCTGCACCGGCCTTCTCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CAGGCCCCGGAGCGCTGTCTCGCGAACGCTGGCACATaGGGACTGCAGGGCAGCAAGCAGCACGTCCACCTC +
Preference number: 6 (lower is better)
Translates to: QAPERCLANAGT*GLQGSKQHVHL
Trigger: GAGGTGGACGTGCTGCTTGCTGCCCTGCAGTCCCCATGTGCCAGCGTTCGCGAGACAGCGCTCCGGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp GTCAGGGCCTCAGTGGCGGAGGAGTCACTGCACTGGCGGGCCAGGTaGCGAAGCGCCAGGACCGCTTCATCCATCAGGCGGGGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: VRASVAEESLHWRAR*RSARTASSIRRGLL
Trigger: CAACAGCCCCCGCCTGATGGATGAAGCGGTCCTGGCGCTTCGCAACCTGGCCCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp AGGGCTGCGGCGACCCCTTCGGTGACTGTGGGGACCTaGGTGCCCTGGGAGGCCGCCTTCTCTACTGTCTGC +
Preference number: 6 (lower is better)
Translates to: RAAATPSVTVGT*VPWEAAFSTVC
Trigger: GCAGACAGTAGAGAAGGCGGCCTCCCAGGGCACTCAGGTCCCCACAGTCACCGAAGGGGTCGCCGCAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GTGCAGCGACGCCTGCCTCACCACCAGCTGGGTGTCTaGGCGGCCCATGTAGAGTCCCGCCAGGACCCGGTT +
Preference number: 6 (lower is better)
Translates to: VQRRLPHHQLGV*AAHVESRQDPV
Trigger: AACCGGGTCCTGGCGGGACTCTACATGGGCCGCTCAGACACCCAGCTGGTGGTGAGGCAGGCGTCGCTGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp AGAGAGTGCAGGAGGTTCTTGGCGGTGGCCTCTGGCTaGGCCTCGGCCAGCTGCTGGATGGCTGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RECRRFLAVASG*ASASCWMAACR
Trigger: CCTGCAGGCAGCCATCCAGCAGCTGGCCGAGGCCCAGCCAGAGGCCACCGCCAAGAACCTCCTGCACTCTCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CAGCAACTCCGGGCCATTCTCGTCCACCCGCTCAGGTaGGGTGTCAGGGGACGCCCTCAGCTGGGCATGGAC +
Preference number: 6 (lower is better)
Translates to: QQLRAILVHPLR*GVRGRPQLGMD
Trigger: GTCCATGCCCAGCTGAGGGCGTCCCCTGACACCCCACCTGAGCGGGTGGACGAGAATGGCCCGGAGTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GCTCCATCAGGCCCCGGAGCGCTGTCTCGCGAACGCTaGCACATGGGGACTGCAGGGCAGCAAGCAGCACGT +
Preference number: 6 (lower is better)
Translates to: APSGPGALSRER*HMGTAGQQAAR
Trigger: ACGTGCTGCTTGCTGCCCTGCAGTCCCCATGTGCCAGCGTTCGCGAGACAGCGCTCCGGGGCCTGATGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp AGCTTCCGAACTGTCTGCTGGGCCTGCCTGCGCACATaGCAGGTCCGGCTCAGGAGCACAGCCACCAGGACC +
Preference number: 6 (lower is better)
Translates to: SFRTVCWACLRT*QVRLRSTATRT
Trigger: GGTCCTGGTGGCTGTGCTCCTGAGCCGGACCTGGCATGTGCGCAGGCAGGCCCAGCAGACAGTTCGGAAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp ACAGCGGGGCGGCATCTGGCTCGCCCTTGCCCACCCTaGTGGGGATGGTGTGTGTATGCAACAGCGACACCG +
Preference number: 6 (lower is better)
Translates to: TAGRHLARPCPP*WGWCVYATATP
Trigger: CGGTGTCGCTGTTGCATACACACACCATCCCCAGCAGGGTGGGCAAGGGCGAGCCAGATGCCGCCCCGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CGTCAGGATGGTGTCGTCCACCTGCTCCACCGAGTCTaGCTGGCAGGCCAGCTTCCTCAGCGACCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: RQDGVVHLLHRV*LAGQLPQRPPA
Trigger: AGCCGGAGGTCGCTGAGGAAGCTGGCCTGCCAGGCAGACTCGGTGGAGCAGGTGGACGACACCATCCTGACG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp TTGGTCAGGGCCTCAGTGGCGGAGGAGTCACTGCACTaGCGGGCCAGGTTGCGAAGCGCCAGGACCGCTTCA +
Preference number: 6 (lower is better)
Translates to: LVRASVAEESLH*RARLRSARTAS
Trigger: TGAAGCGGTCCTGGCGCTTCGCAACCTGGCCCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp AGCCCGTCCCGATCACCCACGTCAGCAGGCGCAGCATaGCCACTCGAGGCAGCAACTCCGGGCCATTCTCGT +
Preference number: 6 (lower is better)
Translates to: SPSRSPTSAGAA*PLEAATPGHSR
Trigger: ACGAGAATGGCCCGGAGTTGCTGCCTCGAGTGGCCATGCTGCGCCTGCTGACGTGGGTGATCGGGACGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp TCCATGAGCCTGCCCATAACCTCCGCTGCCTGCCGCTaGTACCGTGCCACCGCCTGGGAAAGGGCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: SMSLPITSAACR*YRATAWERASA
Trigger: GGCTGAAGCCCTTTCCCAGGCGGTGGCACGGTACCAGCGGCAGGCAGCGGAGGTTATGGGCAGGCTCATGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp TCAGTGGCGGAGGAGTCACTGCACTGGCGGGCCAGGTaGCGAAGCGCCAGGACCGCTTCATCCATCAGGCGG +
Preference number: 6 (lower is better)
Translates to: SVAEESLHWRAR*RSARTASSIRR
Trigger: CCGCCTGATGGATGAAGCGGTCCTGGCGCTTCGCAACCTGGCCCGCCAGTGCAGTGACTCCTCCGCCACTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp AAGGAGAAGGCCGGTGCAGACAGCGGGGCGGCATCTGGCTCGCCCTaGCCCACCCTGCTGGGGATGGTGTGTGTATGCAACAGCGACACC +
Preference number: 6 (lower is better)
Translates to: KEKAGADSGAASGSP*PTLLGMVCVCNSDT
Trigger: GGTGTCGCTGTTGCATACACACACCATCCCCAGCAGGGTGGGCAAGGGCGAGCCAGATGCCGCCCCGCTGTCTGCACCGGCCTTCTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp ACCAGGCCCGCCAGCCCGTATGCCGCCCCTTTGCGCTCCGCATACTaGTCCGACTCCAACAGCTGCTGCATGAGCCGCTGGATCATGCCC +
Preference number: 6 (lower is better)
Translates to: TRPASPYAAPLRSAY*SDSNSCCMSRWIMP
Trigger: GGGCATGATCCAGCGGCTCATGCAGCAGCTGTTGGAGTCGGACAAGTATGCGGAGCGCAAAGGGGCGGCATACGGGCTGGCGGGCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp ATGCCCAGGCCCTTGACCAGGCCCGCCAGCCCGTATGCCGCCCCTTaGCGCTCCGCATACTTGTCCGACTCCAACAGCTGCTGCATGAGC +
Preference number: 6 (lower is better)
Translates to: MPRPLTRPASPYAAP*RSAYLSDSNSCCMS
Trigger: GCTCATGCAGCAGCTGTTGGAGTCGGACAAGTATGCGGAGCGCAAAGGGGCGGCATACGGGCTGGCGGGCCTGGTCAAGGGCCTGGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp CTGCCGCCTCCCGGACCTCCTCCAGGGGATCACACAGCGCCTTCCTaGCCGTGGGCACAAGGGACTCAGAGAAGAAGAGCACAGCGTCCC +
Preference number: 6 (lower is better)
Translates to: LPPPGPPPGDHTAPS*PWAQGTQRRRAQRP
Trigger: GGGACGCTGTGCTCTTCTTCTCTGAGTCCCTTGTGCCCACGGCAAGGAAGGCGCTGTGTGATCCCCTGGAGGAGGTCCGGGAGGCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp AGAGGGACTGGAGCAGCTCCTCGCCCCGCCTCATCTTaGGCAGGTTCACGATGGCCTGGTCGCTGTAGGCCC +
Preference number: 6 (lower is better)
Translates to: RGTGAAPRPASS*AGSRWPGRCRP
Trigger: GGGCCTACAGCGACCAGGCCATCGTGAACCTGCTCAAGATGAGGCGGGGCGAGGAGCTGCTCCAGTCCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GGCGTCAGCCACAGACAGCTTGGAGAGCAGAAGGGCTaGGGCGACCCCTTCGGTGACTGTGGGGACCTGAGT +
Preference number: 6 (lower is better)
Translates to: GVSHRQLGEQKG*GDPFGDCGDLS
Trigger: ACTCAGGTCCCCACAGTCACCGAAGGGGTCGCCGCAGCCCTTCTGCTCTCCAAGCTGTCTGTGGCTGACGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp ACACCCCCAAGAGAGGACAGCAGCTTCCGAACTGTCTaGTGGGCCTGCCTGCGCACATGCCAGGTCCGGCTC +
Preference number: 6 (lower is better)
Translates to: TPPREDSSFRTV*WACLRTCQVRL
Trigger: GAGCCGGACCTGGCATGTGCGCAGGCAGGCCCAGCAGACAGTTCGGAAGCTGCTGTCCTCTCTTGGGGGTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp TCGCCCTTGCCCACCCTGCTGGGGATGGTGTGTGTATaGAACAGCGACACCGCCCTCCTGACAGCCACAGGC +
Preference number: 6 (lower is better)
Translates to: SPLPTLLGMVCV*NSDTALLTATG
Trigger: GCCTGTGGCTGTCAGGAGGGCGGTGTCGCTGTTGCATACACACACCATCCCCAGCAGGGTGGGCAAGGGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CGGGAGCAGTACATGTTCAGGATGATGGCCGCCGCCTaGCTCATGCCCACTTCAGGGCTGCGCGTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: REQYMFRMMAAA*LMPTSGLRVAS
Trigger: GGAAGCCACGCGCAGCCCTGAAGTGGGCATGAGGCAGGCGGCGGCCATCATCCTGAACATGTACTGCTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CTGCCTGGCAGGCCAGCTTCCTCAGCGACCTCCGGCTaGATTCATTCAGAGCCTCCAGGCTGGCCACGTCCA +
Preference number: 6 (lower is better)
Translates to: LPGRPASSATSG*IHSEPPGWPRP
Trigger: TGGACGTGGCCAGCCTGGAGGCTCTGAATGAATGCAGCCGGAGGTCGCTGAGGAAGCTGGCCTGCCAGGCAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp AGGATGGTGTCGTCCACCTGCTCCACCGAGTCTGCCTaGCAGGCCAGCTTCCTCAGCGACCTCCGGCTGCAT +
Preference number: 6 (lower is better)
Translates to: RMVSSTCSTESA*QASFLSDLRLH
Trigger: ATGCAGCCGGAGGTCGCTGAGGAAGCTGGCCTGCCAGGCAGACTCGGTGGAGCAGGTGGACGACACCATCCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp GCCAGCCCGTATGCCGCCCCTTTGCGCTCCGCATACTaGTCCGACTCCAACAGCTGCTGCATGAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: ASPYAAPLRSAY*SDSNSCCMSRW
Trigger: CCAGCGGCTCATGCAGCAGCTGTTGGAGTCGGACAAGTATGCGGAGCGCAAAGGGGCGGCATACGGGCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp TCCAAAGCCTGGTGGCCAATGGTGGAGTGCAGCTGCTCAAAGGTCTaGGCTGCCGCCTCCCGGACCTCCTCCAGGGGATCACACAGCGCC +
Preference number: 6 (lower is better)
Translates to: SKAWWPMVECSCSKV*AAASRTSSRGSHSA
Trigger: GGCGCTGTGTGATCCCCTGGAGGAGGTCCGGGAGGCGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GCCGGCCATTACCTCAGCCAACCCTTGGGCAGCGCCTaGGCGATCCACGGAGCTCTGCTCGTACGTCAGAGT +
Preference number: 6 (lower is better)
Translates to: AGHYLSQPLGSA*AIHGALLVRQS
Trigger: ACTCTGACGTACGAGCAGAGCTCCGTGGATCGCTCAGGCGCTGCCCAAGGGTTGGCTGAGGTAATGGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp AGTCGGCCTTGGAGCGGGAGCAGTACATGTTCAGGATaGTGGCCGCCGCCTGCCTCATGCCCACTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: SRPWSGSSTCSG*WPPPASCPLQG
Trigger: GCCCTGAAGTGGGCATGAGGCAGGCGGCGGCCATCATCCTGAACATGTACTGCTCCCGCTCCAAGGCCGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CCTGCAACAGTGTGTCACCTCGGAAGGAGGCCAGCATaGACTGCAGGTAGGCGTGCCGCACTGCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: PATVCHLGRRPA*TAGRRAALQRW
Trigger: CCACCTCTGCAGTGCGGCACGCCTACCTGCAGTGCATGCTGGCCTCCTTCCGAGGTGACACACTGTTGCAGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CCCGAGCTTGCGGACGAGGTCGCCCAGCGTCCTCGCTaGGATCGTTCTCTTATCTGCACACGTGCTAGCCAG +
Preference number: 6 (lower is better)
Translates to: PELADEVAQRPR*DRSLICTRASQ
Trigger: CTGGCTAGCACGTGTGCAGATAAGAGAACGATCGCAGCGAGGACGCTGGGCGACCTCGTCCGCAAGCTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GCCAATGGTGGAGTGCAGCTGCTCAAAGGTCTTGGCTaGCGCCTCCCGGACCTCCTCCAGGGGATCACACAG +
Preference number: 6 (lower is better)
Translates to: ANGGVQLLKGLG*RLPDLLQGITQ
Trigger: CTGTGTGATCCCCTGGAGGAGGTCCGGGAGGCGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CAAGGATCGCAAACAGGTGCTTGGTCAGGGCCTCAGTaGCGGAGGAGTCACTGCACTGGCGGGCCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: QGSQTGAWSGPQ*RRSHCTGGPGC
Trigger: GCAACCTGGCCCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACCTGTTTGCGATCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp ACTCCCCCATGCCCTTCACCATGGCCCCAAGAGCCTTaGCAGACACGGTGCGCACCTCAGGGACAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: TPPCPSPWPQEP*QTRCAPQGQGP
Trigger: TGGACCCTGTCCCTGAGGTGCGCACCGTGTCTGCAAAGGCTCTTGGGGCCATGGTGAAGGGCATGGGGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp TCTCGTATGCCCGGGTCCTCCACCGCGCGGATGCCGTaGAGCAGCTCTGTAAAGAGGGGGTCCACCTTGACG +
Preference number: 6 (lower is better)
Translates to: SRMPGSSTARMP*SSSVKRGSTLT
Trigger: CGTCAAGGTGGACCCCCTCTTTACAGAGCTGCTCAACGGCATCCGCGCGGTGGAGGACCCGGGCATACGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp AACAGCTGCTGCATGAGCCGCTGGATCATGCCCCCAGCATCCTCCTaGACAGCAGGCACGAGAGGTGGCAGGCAGCTGGCCACAGACTCC +
Preference number: 6 (lower is better)
Translates to: NSCCMSRWIMPPASS*TAGTRGGRQLATDS
Trigger: GGAGTCTGTGGCCAGCTGCCTGCCACCTCTCGTGCCTGCTGTCAAGGAGGATGCTGGGGGCATGATCCAGCGGCTCATGCAGCAGCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp AGGCCAAAGAGAGTGGGCAGGATCTCTCGCAGGGTGCGGGGAGTGTaGGAGACGACAATCTTCCACACGTGCAGCGACGCCTGCCTCACC +
Preference number: 6 (lower is better)
Translates to: RPKRVGRISRRVRGV*ETTIFHTCSDACLT
Trigger: GGTGAGGCAGGCGTCGCTGCACGTGTGGAAGATTGTCGTCTCCAACACTCCCCGCACCCTGCGAGAGATCCTGCCCACTCTCTTTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GGTCACTCTTGTCCAGGTGTTTGGCCAGAGACCCCATaGGGACCACCACGCTCTGCCGCACAGCGTCGTAGC +
Preference number: 6 (lower is better)
Translates to: GHSCPGVWPETP*GPPRSAAQRRS
Trigger: GCTACGACGCTGTGCGGCAGAGCGTGGTGGTCCTCATGGGGTCTCTGGCCAAACACCTGGACAAGAGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CATGCTTTGGAGCCAACCCCTGAAGACTGGAGAGAGTaGAGGAGGTTCTTGGCGGTGGCCTCTGGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: HALEPTPEDWRE*RRFLAVASGWA
Trigger: GGCCCAGCCAGAGGCCACCGCCAAGAACCTCCTGCACTCTCTCCAGTCTTCAGGGGTTGGCTCCAAAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp AGTCCAAGTGCCGCCTCTAGTTCCCCGTCCAGCTCCTaGAGCCGCCTCCGGATTTGTGCCTCCTTGTCCATC +
Preference number: 6 (lower is better)
Translates to: SPSAASSSPSSS*SRLRICASLSI
Trigger: GATGGACAAGGAGGCACAAATCCGGAGGCGGCTGCAGGAGCTGGACGGGGAACTAGAGGCGGCACTTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp AACCCTTGGGCAGCGCCTGAGCGATCCACGGAGCTCTaGTCGTACGTCAGAGTCTCCATCAGCCATGGCAGC +
Preference number: 6 (lower is better)
Translates to: NPWAAPERSTEL*SYVRVSISHGS
Trigger: GCTGCCATGGCTGATGGAGACTCTGACGTACGAGCAGAGCTCCGTGGATCGCTCAGGCGCTGCCCAAGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GTGCGGGGAGTGTTGGAGACGACAATCTTCCACACGTaGAGCGACGCCTGCCTCACCACCAGCTGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: VRGVLETTIFHT*SDACLTTSWVS
Trigger: AGACACCCAGCTGGTGGTGAGGCAGGCGTCGCTGCACGTGTGGAAGATTGTCGTCTCCAACACTCCCCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CCGGACCTCCTCCAGGGGATCACACAGCGCCTTCCTTaGCGTGGGCACAAGGGACTCAGAGAAGAAGAGCAC +
Preference number: 6 (lower is better)
Translates to: PDLLQGITQRLP*RGHKGLREEEH
Trigger: GTGCTCTTCTTCTCTGAGTCCCTTGTGCCCACGGCAAGGAAGGCGCTGTGTGATCCCCTGGAGGAGGTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp TCTCATCCACAACCAGCTGCCAAAAGCCGCTCAGCTTaGCCTCGGCCTGGGCGTCAGCCACAGACAGCTTGG +
Preference number: 6 (lower is better)
Translates to: SHPQPAAKSRSA*PRPGRQPQTAW
Trigger: CCAAGCTGTCTGTGGCTGACGCCCAGGCCGAGGCCAAGCTGAGCGGCTTTTGGCAGCTGGTTGTGGATGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GCAATAGCTGTCTCAGCGTACATCGAGATGACCCGCTaGCCGGCACGCAGGGCGGTGTCACGAACGAACTCG +
Preference number: 6 (lower is better)
Translates to: AIAVSAYIEMTR*PARRAVSRTNS
Trigger: CGAGTTCGTTCGTGACACCGCCCTGCGTGCCGGCCAGCGGGTCATCTCGATGTACGCTGAGACAGCTATTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GAGTGGGCAGGATCTCTCGCAGGGTGCGGGGAGTGTTaGAGACGACAATCTTCCACACGTGCAGCGACGCCT +
Preference number: 6 (lower is better)
Translates to: EWAGSLAGCGEC*RRQSSTRAATP
Trigger: AGGCGTCGCTGCACGTGTGGAAGATTGTCGTCTCCAACACTCCCCGCACCCTGCGAGAGATCCTGCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GCGACCTCCGGCTGCATTCATTCAGAGCCTCCAGGCTaGCCACGTCCAGGATCTTGGAGAGGGACTGGAGCA +
Preference number: 6 (lower is better)
Translates to: ATSGCIHSEPPG*PRPGSWRGTGA
Trigger: TGCTCCAGTCCCTCTCCAAGATCCTGGACGTGGCCAGCCTGGAGGCTCTGAATGAATGCAGCCGGAGGTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp AGAGTGGGCAGGATCTCTCGCAGGGTGCGGGGAGTGTaGGAGACGACAATCTTCCACACGTGCAGCGACGCC +
Preference number: 6 (lower is better)
Translates to: RVGRISRRVRGV*ETTIFHTCSDA
Trigger: GGCGTCGCTGCACGTGTGGAAGATTGTCGTCTCCAACACTCCCCGCACCCTGCGAGAGATCCTGCCCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp ATGGGGATGATCTCAGGAAGGATCTTCTCCCCGAGCTaGCGGACGAGGTCGCCCAGCGTCCTCGCTGCGATC +
Preference number: 6 (lower is better)
Translates to: MGMISGRIFSPS*RTRSPSVLAAI
Trigger: GATCGCAGCGAGGACGCTGGGCGACCTCGTCCGCAAGCTCGGGGAGAAGATCCTTCCTGAGATCATCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp CCCGGACCTCCTCCAGGGGATCACACAGCGCCTTCCTaGCCGTGGGCACAAGGGACTCAGAGAAGAAGAGCA +
Preference number: 6 (lower is better)
Translates to: PGPPPGDHTAPS*PWAQGTQRRRA
Trigger: TGCTCTTCTTCTCTGAGTCCCTTGTGCCCACGGCAAGGAAGGCGCTGTGTGATCCCCTGGAGGAGGTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp GTCTGCCTCTTCTCATCCACAACCAGCTGCCAAAAGCCGCTCAGCTaGGCCTCGGCCTGGGCGTCAGCCACAGACAGCTTGGAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: VCLFSSTTSCQKPLS*ASAWASATDSLESR
Trigger: TCTGCTCTCCAAGCTGTCTGTGGCTGACGCCCAGGCCGAGGCCAAGCTGAGCGGCTTTTGGCAGCTGGTTGTGGATGAGAAGAGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp AGTTCCCCGTCCAGCTCCTGCAGCCGCCTCCGGATTTGTGCCTCCTaGTCCATCTGGGCTTGCAGCATCTCCTTCTGCTTGCTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: SSPSSSCSRLRICAS*SIWACSISFCLLVS
Trigger: GCTGACCAGCAAGCAGAAGGAGATGCTGCAAGCCCAGATGGACAAGGAGGCACAAATCCGGAGGCGGCTGCAGGAGCTGGACGGGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp CAAAGCACGACTCCCCCATGCCCTTCACCATGGCCCCAAGAGCCTTaGCAGACACGGTGCGCACCTCAGGGACAGGGTCCAAGAGTGAAG +
Preference number: 6 (lower is better)
Translates to: QSTTPPCPSPWPQEP*QTRCAPQGQGPRVK
Trigger: CTTCACTCTTGGACCCTGTCCCTGAGGTGCGCACCGTGTCTGCAAAGGCTCTTGGGGCCATGGTGAAGGGCATGGGGGAGTCGTGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp TTGAGAGCGTCCCAGCTCTCCTCCAGAACCACAGGGCTGGAGTCATaGAAGAGGCGGATCAAGCCCGAGACCAGGCTGCGAAGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: LRASQLSSRTTGLES*KRRIKPETRLRRWL
Trigger: CAGCCACCTTCGCAGCCTGGTCTCGGGCTTGATCCGCCTCTTCAATGACTCCAGCCCTGTGGTTCTGGAGGAGAGCTGGGACGCTCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp ACCGCGCGGATGCCGTTGAGCAGCTCTGTAAAGAGGGGGTCCACCTaGACGTGGATGGAAATGAGCTTCCCCAGAGCATCGGCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: TARMPLSSSVKRGST*TWMEMSFPRASAAF
Trigger: GAAGGCGGCCGATGCTCTGGGGAAGCTCATTTCCATCCACGTCAAGGTGGACCCCCTCTTTACAGAGCTGCTCAACGGCATCCGCGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp CCCAGCTCTCCTCCAGAACCACAGGGCTGGAGTCATTaGAGAGGCGGATCAAGCCCGAGACCAGGCTGCGAA +
Preference number: 6 (lower is better)
Translates to: PSSPPEPQGWSH*RGGSSPRPGCE
Trigger: TTCGCAGCCTGGTCTCGGGCTTGATCCGCCTCTTCAATGACTCCAGCCCTGTGGTTCTGGAGGAGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp TTCCCCGTCCAGCTCCTGCAGCCGCCTCCGGATTTGTaGCTCCTTGTCCATCTGGGCTTGCAGCATCTCCTT +
Preference number: 6 (lower is better)
Translates to: FPVQLLQPPPDL*LLVHLGLQHLL
Trigger: AAGGAGATGCTGCAAGCCCAGATGGACAAGGAGGCACAAATCCGGAGGCGGCTGCAGGAGCTGGACGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp TTGCGCTCCGCATACTTGTCCGACTCCAACAGCTGCTaGATGAGCCGCTGGATCATGCCCCCAGCATCCTCC +
Preference number: 6 (lower is better)
Translates to: LRSAYLSDSNSC*MSRWIMPPASS
Trigger: GGAGGATGCTGGGGGCATGATCCAGCGGCTCATGCAGCAGCTGTTGGAGTCGGACAAGTATGCGGAGCGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CCTTTGCGCTCCGCATACTTGTCCGACTCCAACAGCTaGTGCATGAGCCGCTGGATCATGCCCCCAGCATCC +
Preference number: 6 (lower is better)
Translates to: PLRSAYLSDSNS*CMSRWIMPPAS
Trigger: GGATGCTGGGGGCATGATCCAGCGGCTCATGCAGCAGCTGTTGGAGTCGGACAAGTATGCGGAGCGCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp TCCTGGATAGCATCAGTCAGCGCGGCCATCATCTCCTaGTGCTTCAGGGAGAGGATGCCCAGGCCCTTGACC +
Preference number: 6 (lower is better)
Translates to: SWIASVSAAIIS*CFRERMPRPLT
Trigger: GGTCAAGGGCCTGGGCATCCTCTCCCTGAAGCAGCAGGAGATGATGGCCGCGCTGACTGATGCTATCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GCAGGACGACAGCTGCTTAGGTGCACAGTACGCCATTaGCCCGAGCAGCTCTACGGACCCAGCTTTGGTCCT +
Preference number: 6 (lower is better)
Translates to: AGRQLLRCTVRH*PEQLYGPSFGP
Trigger: AGGACCAAAGCTGGGTCCGTAGAGCTGCTCGGGGCAATGGCGTACTGTGCACCTAAGCAGCTGTCGTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp AGCTTGGGCACAATGTTGGGCAGGCAGGACGACAGCTaGTTAGGTGCACAGTACGCCATTGCCCCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: SLGTMLGRQDDS*LGAQYAIAPSS
Trigger: GCTGCTCGGGGCAATGGCGTACTGTGCACCTAAGCAGCTGTCGTCCTGCCTGCCCAACATTGTGCCCAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp ATCACCAAGCCCAAGCCCTTGGCTGCTTCTTCCTTCTaGTCAGGACTGCCAGTGAGGACCCCTTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: ITKPKPLAASSF*SGLPVRTPSRS
Trigger: GCTGCGGGAAGGGGTCCTCACTGGCAGTCCTGAGCAGAAGGAAGAAGCAGCCAAGGGCTTGGGCTTGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GCGCCAAGCTCCGGCCGTGCCGAACCATCCAGTCAATaGCAGATACGTCAGCTAGCAGGCACTGCTGAAGGA +
Preference number: 6 (lower is better)
Translates to: APSSGRAEPSSQ*QIRQLAGTAEG
Trigger: TCCTTCAGCAGTGCCTGCTAGCTGACGTATCTGGCATTGACTGGATGGTTCGGCACGGCCGGAGCTTGGCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp TTTCGTGTGTCTGTGGAGCGGTCCTGGAAGGCTCTCTaGACAATGGGCATGATGAGCGCCAGGGACGGGGCA +
Preference number: 6 (lower is better)
Translates to: FRVSVERSWKAL*TMGMMSARDGA
Trigger: TGCCCCGTCCCTGGCGCTCATCATGCCCATTGTCCAGAGAGCCTTCCAGGACCGCTCCACAGACACACGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp TTCTCATCCACAACCAGCTGCCAAAAGCCGCTCAGCTaGGCCTCGGCCTGGGCGTCAGCCACAGACAGCTTG +
Preference number: 6 (lower is better)
Translates to: FSSTTSCQKPLS*ASAWASATDSL
Trigger: CAAGCTGTCTGTGGCTGACGCCCAGGCCGAGGCCAAGCTGAGCGGCTTTTGGCAGCTGGTTGTGGATGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp AGTTCCCCAAGGCACCCAGCTGTGGAGATCCGAGTGTaGTCCTCGTCATGGCCCAGCATGCTCAGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: SSPRHPAVEIRV*SSSWPSMLSRS
Trigger: GCTCCTGCTGAGCATGCTGGGCCATGACGAGGACAACACTCGGATCTCCACAGCTGGGTGCCTTGGGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp ATGGTTAGCTTTCCTTCTGAGCCTCCAAGGATCGCAAACAGGTGCTaGGTCAGGGCCTCAGTGGCGGAGGAGTCACTGCACTGGCGGGCC +
Preference number: 6 (lower is better)
Translates to: MVSFPSEPPRIANRC*VRASVAEESLHWRA
Trigger: GGCCCGCCAGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACCTGTTTGCGATCCTTGGAGGCTCAGAAGGAAAGCTAACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp AACATGGTGTCTCGTATGCCCGGGTCCTCCACCGCGCGGATGCCGTaGAGCAGCTCTGTAAAGAGGGGGTCCACCTTGACGTGGATGGAA +
Preference number: 6 (lower is better)
Translates to: NMVSRMPGSSTARMP*SSSVKRGSTLTWME
Trigger: TTCCATCCACGTCAAGGTGGACCCCCTCTTTACAGAGCTGCTCAACGGCATCCGCGCGGTGGAGGACCCGGGCATACGAGACACCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp AGAGCACACTCTGGCTTCAGCAGGCGCAGGGTCACATaGCTCACCAAGGTGCCCAAGGTCTTGAGTCTCGGG +
Preference number: 6 (lower is better)
Translates to: RAHSGFSRRRVT*LTKVPKVLSLG
Trigger: CCCGAGACTCAAGACCTTGGGCACCTTGGTGAGTCATGTGACCCTGCGCCTGCTGAAGCCAGAGTGTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp AGACACGGTGCGCACCTCAGGGACAGGGTCCAAGAGTaGAGCTTTCAGGCCAGGTGTCACACTGGGCAGGTA +
Preference number: 6 (lower is better)
Translates to: RHGAHLRDRVQE*SFQARCHTGQV
Trigger: TACCTGCCCAGTGTGACACCTGGCCTGAAAGCTTCACTCTTGGACCCTGTCCCTGAGGTGCGCACCGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp CAGCCACAGAGGACAGGAAAGCCAGCACCCGGGTATTaGCGGGTGGTGTTGTCAGCTTGGGCACCAGATAGG +
Preference number: 6 (lower is better)
Translates to: QPQRTGKPAPGY*RVVLSAWAPDR
Trigger: CCTATCTGGTGCCCAAGCTGACAACACCACCCGTCAATACCCGGGTGCTGGCTTTCCTGTCCTCTGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GGTCAAGGAAAAGCCTCTCCGTCAGACGCAGCACAGTaGACAGGGCGTCCTCTGAAGCCAGGAGCAGGAACT +
Preference number: 6 (lower is better)
Translates to: GQGKASPSDAAQ*TGRPLKPGAGT
Trigger: AGTTCCTGCTCCTGGCTTCAGAGGACGCCCTGTGCACTGTGCTGCGTCTGACGGAGAGGCTTTTCCTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CTGGGAAAGGGCTTCAGCCCCGGCCTGCCTCACGGCTaGCTCGTGATAGATCACGTCATCGATCAGCAAAGA +
Preference number: 6 (lower is better)
Translates to: LGKGFSPGLPHG*LVIDHVIDQQR
Trigger: TCTTTGCTGATCGATGACGTGATCTATCACGAGGCAGCCGTGAGGCAGGCCGGGGCTGAAGCCCTTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GCTCTGCCGCACAGCGTCGTAGCTGGCATCATTGGGTaGGTCCTTCAGGAACTCCTCAAACACTGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: ALPHSVVAGIIG*VLQELLKHWQQ
Trigger: CTGCTGCCAGTGTTTGAGGAGTTCCTGAAGGACGCACCCAATGATGCCAGCTACGACGCTGTGCGGCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CACAATGTTGGGCAGGCAGGACGACAGCTGCTTAGGTaGACAGTACGCCATTGCCCCGAGCAGCTCTACGGA +
Preference number: 6 (lower is better)
Translates to: HNVGQAGRQLLR*TVRHCPEQLYG
Trigger: TCCGTAGAGCTGCTCGGGGCAATGGCGTACTGTGCACCTAAGCAGCTGTCGTCCTGCCTGCCCAACATTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GGAGGCCAAAGAGAGTGGGCAGGATCTCTCGCAGGGTaGGGGGAGTGTTGGAGACGACAATCTTCCACACGT +
Preference number: 6 (lower is better)
Translates to: GGQREWAGSLAG*GECWRRQSSTR
Trigger: ACGTGTGGAAGATTGTCGTCTCCAACACTCCCCGCACCCTGCGAGAGATCCTGCCCACTCTCTTTGGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp AGCCCGATGCACACGCCCTGCCTCTCGTCGCTCTTCTaGGACCTTAGTCCTTCTTCCAGGATGGGGATGATC +
Preference number: 6 (lower is better)
Translates to: SPMHTPCLSSLF*DLSPSSRMGMI
Trigger: GATCATCCCCATCCTGGAAGAAGGACTAAGGTCGCAGAAGAGCGACGAGAGGCAGGGCGTGTGCATCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp ACATTCACAGCCACGGACAGCGCCAAGCTCCGGCCGTaGCGAACCATCCAGTCAATGCCAGATACGTCAGCT +
Preference number: 6 (lower is better)
Translates to: TFTATDSAKLRP*RTIQSMPDTSA
Trigger: AGCTGACGTATCTGGCATTGACTGGATGGTTCGGCACGGCCGGAGCTTGGCGCTGTCCGTGGCTGTGAATGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GCAGAACAACTTGCAGAGCCCTTTCACGGCTCCCTCTaGCAGATCTTTGCCGGCGATGCATCGCCCCAGTTC +
Preference number: 6 (lower is better)
Translates to: AEQLAEPFHGSL*QIFAGDASPQF
Trigger: GAACTGGGGCGATGCATCGCCGGCAAAGATCTGCCAGAGGGAGCCGTGAAAGGGCTCTGCAAGTTGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GGACGCGGTCAGGAGACAGGACAGAAAGGGAGCCCATaGCGTTCATGGAAGACTGGTTCAGGGGACTCTGTG +
Preference number: 6 (lower is better)
Translates to: GRGQETGQKGSP*RSWKTGSGDSV
Trigger: CACAGAGTCCCCTGAACCAGTCTTCCATGAACGCCATGGGCTCCCTTTCTGTCCTGTCTCCTGACCGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp TGCAGCCGCCTCCGGATTTGTGCCTCCTTGTCCATCTaGGCTTGCAGCATCTCCTTCTGCTTGCTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: CSRLRICASLSI*ACSISFCLLVS
Trigger: GCTGACCAGCAAGCAGAAGGAGATGCTGCAAGCCCAGATGGACAAGGAGGCACAAATCCGGAGGCGGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CCACGCTCTGCCGCACAGCGTCGTAGCTGGCATCATTaGGTGCGTCCTTCAGGAACTCCTCAAACACTGGCA +
Preference number: 6 (lower is better)
Translates to: PRSAAQRRSWHH*VRPSGTPQTLA
Trigger: TGCCAGTGTTTGAGGAGTTCCTGAAGGACGCACCCAATGATGCCAGCTACGACGCTGTGCGGCAGAGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp AGCCGTCGCGGACGTGGGGTGCGATGTCCACTTTGCTaGCTGTGGCCACGATCTCTGGCATCAGTTTTTCCA +
Preference number: 6 (lower is better)
Translates to: SRRGRGVRCPLC*LWPRSLASVFP
Trigger: TGGAAAAACTGATGCCAGAGATCGTGGCCACAGCCAGCAAAGTGGACATCGCACCCCACGTCCGCGACGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp ACGGGAGAATGTCCTCCAAAGCCTGGTGGCCAATGGTaGAGTGCAGCTGCTCAAAGGTCTTGGCTGCCGCCT +
Preference number: 6 (lower is better)
Translates to: TGECPPKPGGQW*SAAAQRSWLPP
Trigger: AGGCGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTTTGGAGGACATTCTCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GGAACGGGAGAATGTCCTCCAAAGCCTGGTGGCCAATaGTGGAGTGCAGCTGCTCAAAGGTCTTGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: GTGECPPKPGGQ*WSAAAQRSWLP
Trigger: CGGCAGCCAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTTTGGAGGACATTCTCCCGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp AGAGGACAGGAAAGCCAGCACCCGGGTATTGACGGGTaGTGTTGTCAGCTTGGGCACCAGATAGGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: RGQESQHPGIDG*CCQLGHQIGQH
Trigger: GTGCTGCCCTATCTGGTGCCCAAGCTGACAACACCACCCGTCAATACCCGGGTGCTGGCTTTCCTGTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp AGGGTGCTCTTATGCTGGCTGACCGCGTCCATCTCTTaGTGGTTCGTGCAGAACTGCACCAGCAGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: RVLLCWLTASIS*WFVQNCTSSPS
Trigger: GCTGGGGCTGCTGGTGCAGTTCTGCACGAACCACAAAGAGATGGACGCGGTCAGCCAGCATAAGAGCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp TCCAGCTCCTGCAGCCGCCTCCGGATTTGTGCCTCCTaGTCCATCTGGGCTTGCAGCATCTCCTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SSSCSRLRICAS*SIWACSISFCL
Trigger: CAAGCAGAAGGAGATGCTGCAAGCCCAGATGGACAAGGAGGCACAAATCCGGAGGCGGCTGCAGGAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp TCGATCAGGGCCAGCTGGTTACCAGCGTCCAGCTTCTaGGTGATGGCATTGAGAGCGTCCCAGCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SIRASWLPASSF*VMALRASQLSS
Trigger: GGAGGAGAGCTGGGACGCTCTCAATGCCATCACCAAGAAGCTGGACGCTGGTAACCAGCTGGCCCTGATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp CCCGCAGCACTGGAAGGATGGAGGTTACTCCCCTCTTaGGAAGACAGAAGCCTGGCACGTGCTCCCCTTTGC +
Preference number: 6 (lower is better)
Translates to: PAALEGWRLLPS*EDRSLARAPLC
Trigger: GCAAAGGGGAGCACGTGCCAGGCTTCTGTCTTCCAAAGAGGGGAGTAACCTCCATCCTTCCAGTGCTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp AACTCCAGCAGGGTGCTCTTATGCTGGCTGACCGCGTCCATCTCTTaGTGGTTCGTGCAGAACTGCACCAGCAGCCCCAGCATGGCAGCA +
Preference number: 6 (lower is better)
Translates to: NSSRVLLCWLTASIS*WFVQNCTSSPSMAA
Trigger: TGCTGCCATGCTGGGGCTGCTGGTGCAGTTCTGCACGAACCACAAAGAGATGGACGCGGTCAGCCAGCATAAGAGCACCCTGCTGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp TCTTCCAGGATGGGGATGATCTCAGGAAGGATCTTCTCCCCGAGCTaGCGGACGAGGTCGCCCAGCGTCCTCGCTGCGATCGTTCTCTTA +
Preference number: 6 (lower is better)
Translates to: SSRMGMISGRIFSPS*RTRSPSVLAAIVLL
Trigger: TAAGAGAACGATCGCAGCGAGGACGCTGGGCGACCTCGTCCGCAAGCTCGGGGAGAAGATCCTTCCTGAGATCATCCCCATCCTGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp ATCAGGGCCAGCTGGTTACCAGCGTCCAGCTTCTTGGTGATGGCATaGAGAGCGTCCCAGCTCTCCTCCAGAACCACAGGGCTGGAGTCA +
Preference number: 6 (lower is better)
Translates to: IRASWLPASSFLVMA*RASQLSSRTTGLES
Trigger: TGACTCCAGCCCTGTGGTTCTGGAGGAGAGCTGGGACGCTCTCAATGCCATCACCAAGAAGCTGGACGCTGGTAACCAGCTGGCCCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp AGCAAGAGGCTGAGTGTCTCCAGCAGAGCCGCCTTCACAGTCCAGTaGAACCGGTCCCCAAGGATGCGAATCAGAGGGCCAGTGATGCTG +
Preference number: 6 (lower is better)
Translates to: SKRLSVSSRAAFTVQ*NRSPRMRIRGPVML
Trigger: CAGCATCACTGGCCCTCTGATTCGCATCCTTGGGGACCGGTTCAACTGGACTGTGAAGGCGGCTCTGCTGGAGACACTCAGCCTCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp CAGAACAACTTGCAGAGCCCTTTCACGGCTCCCTCTGGCAGATCTTaGCCGGCGATGCATCGCCCCAGTTCACTGAGAATCTCTCTCCGC +
Preference number: 6 (lower is better)
Translates to: QNNLQSPFTAPSGRS*PAMHRPSSLRISLR
Trigger: GCGGAGAGAGATTCTCAGTGAACTGGGGCGATGCATCGCCGGCAAAGATCTGCCAGAGGGAGCCGTGAAAGGGCTCTGCAAGTTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp GCCAGCAAGGCAGCTGAGCCGCTACTCTTGCTGGGAACACATGCTTaGGAGCCAACCCCTGAAGACTGGAGAGAGTGCAGGAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: ASKAAEPLLLLGTHA*EPTPEDWRECRRFL
Trigger: CAAGAACCTCCTGCACTCTCTCCAGTCTTCAGGGGTTGGCTCCAAAGCATGTGTTCCCAGCAAGAGTAGCGGCTCAGCTGCCTTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp AGGCACTGCACCTCCACCAGCTTGTTCCAGATGTCTCCTTGCCGCTaGGCCTTCAGGGGAAAGACAATTCGCACTAGGAGGCAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: RHCTSTSLFQMSPCR*AFRGKTIRTRRQVQ
Trigger: CTGGACCTGCCTCCTAGTGCGAATTGTCTTTCCCCTGAAGGCCAAGCGGCAAGGAGACATCTGGAACAAGCTGGTGGAGGTGCAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp CTCCTGCAGCCGCCTCCGGATTTGTGCCTCCTTGTCCATCTGGGCTaGCAGCATCTCCTTCTGCTTGCTGGTCAGCTGTACCTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: LLQPPPDLCLLVHLG*QHLLLLAGQLYLLF
Trigger: AAAGAGGAGGTACAGCTGACCAGCAAGCAGAAGGAGATGCTGCAAGCCCAGATGGACAAGGAGGCACAAATCCGGAGGCGGCTGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GGCATGATGAGCGCCAGGGACGGGGCATCAATGAAGTaGACAAACTTGGTGTCCAGCAGGGTCTGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: GMMSARDGASMK*TNLVSSRVCRH
Trigger: GTGCCTGCAGACCCTGCTGGACACCAAGTTTGTTCACTTCATTGATGCCCCGTCCCTGGCGCTCATCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp AGCTTTCCTTCTGAGCCTCCAAGGATCGCAAACAGGTaGTTGGTCAGGGCCTCAGTGGCGGAGGAGTCACTG +
Preference number: 6 (lower is better)
Translates to: SFPSEPPRIANR*LVRASVAEESL
Trigger: CAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACCTGTTTGCGATCCTTGGAGGCTCAGAAGGAAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GAGCCAATCTGCCTGAGGGCCTGCTGTCCAGCCTTCTaGACTTTGACGTGGGAGTCTGTCAGCACTTCTGTG +
Preference number: 6 (lower is better)
Translates to: EPICLRACCPAF*TLTWESVSTSV
Trigger: CACAGAAGTGCTGACAGACTCCCACGTCAAAGTGCAGAAGGCTGGACAGCAGGCCCTCAGGCAGATTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GTTGAACATCATGATGTAGCCGTCGCGGACGTGGGGTaGGATGTCCACTTTGCTGGCTGTGGCCACGATCTC +
Preference number: 6 (lower is better)
Translates to: VEHHDVAVADVG*DVHFAGCGHDL
Trigger: GAGATCGTGGCCACAGCCAGCAAAGTGGACATCGCACCCCACGTCCGCGACGGCTACATCATGATGTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GACTTCATGATCTCGCTGAGCCCGATGCACACGCCCTaGCTCTCGTCGCTCTTCTGCGACCTTAGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: DFMISLSPMHTP*LSSLFCDLSPS
Trigger: AGAAGGACTAAGGTCGCAGAAGAGCGACGAGAGGCAGGGCGTGTGCATCGGGCTCAGCGAGATCATGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CGCGTGGCTTCCAACAGATCCTCGATGATGATCCGGTaGCCAGTGTCATCCTCCACTGAGAGGATCACAGCC +
Preference number: 6 (lower is better)
Translates to: RVASNRSSMMIR*PVSSSTERITA
Trigger: GGCTGTGATCCTCTCAGTGGAGGATGACACTGGGCACCGGATCATCATCGAGGATCTGTTGGAAGCCACGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GCGCCAGGACCGCTTCATCCATCAGGCGGGGGCTGTTaGACTTCAGCTGATTTGCCAAGCCTTTCACGATGT +
Preference number: 6 (lower is better)
Translates to: APGPLHPSGGGC*TSADLPSLSRC
Trigger: ACATCGTGAAAGGCTTGGCAAATCAGCTGAAGTCCAACAGCCCCCGCCTGATGGATGAAGCGGTCCTGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp TTCCTTCTGAGCCTCCAAGGATCGCAAACAGGTGCTTaGTCAGGGCCTCAGTGGCGGAGGAGTCACTGCACT +
Preference number: 6 (lower is better)
Translates to: FLLSLQGSQTGA*SGPQWRRSHCT
Trigger: AGTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACCTGTTTGCGATCCTTGGAGGCTCAGAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp AGCGCTCCCTCTCGCCTTCGGAAGTTCTTCTTGTCCTaGATAGCATCAGTCAGCGCGGCCATCATCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SAPSRLRKFFLS*IASVSAAIISC
Trigger: GCAGGAGATGATGGCCGCGCTGACTGATGCTATCCAGGACAAGAAGAACTTCCGAAGGCGAGAGGGAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CTGAGGGCCTGCTGTCCAGCCTTCTGCACTTTGACGTaGGAGTCTGTCAGCACTTCTGTGAGCTTGGGCACA +
Preference number: 6 (lower is better)
Translates to: LRACCPAFCTLT*ESVSTSVSLGT
Trigger: TGTGCCCAAGCTCACAGAAGTGCTGACAGACTCCCACGTCAAAGTGCAGAAGGCTGGACAGCAGGCCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp ACAAACTTGGTGTCCAGCAGGGTCTGCAGGCACTTCTaGGTCTTCCGTGATGGGTCTGTCAGGGCATCCAGC +
Preference number: 6 (lower is better)
Translates to: TNLVSSRVCRHF*VFRDGSVRASS
Trigger: GCTGGATGCCCTGACAGACCCATCACGGAAGACCCAGAAGTGCCTGCAGACCCTGCTGGACACCAAGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CCGCAGCACTGGAAGGATGGAGGTTACTCCCCTCTTTaGAAGACAGAAGCCTGGCACGTGCTCCCCTTTGCA +
Preference number: 6 (lower is better)
Translates to: PQHWKDGGYSPL*KTEAWHVLPFA
Trigger: TGCAAAGGGGAGCACGTGCCAGGCTTCTGTCTTCCAAAGAGGGGAGTAACCTCCATCCTTCCAGTGCTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CTCAGGACTGCCAGTGAGGACCCCTTCCCGCAGCACTaGAAGGATGGAGGTTACTCCCCTCTTTGGAAGACA +
Preference number: 6 (lower is better)
Translates to: LRTASEDPFPQH*KDGGYSPLWKT
Trigger: TGTCTTCCAAAGAGGGGAGTAACCTCCATCCTTCCAGTGCTGCGGGAAGGGGTCCTCACTGGCAGTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GAACCTCATTGCTGTATCTGCCTGCACACAGTCTGCTaGGAGCCACATTCACAGCCACGGACAGCGCCAAGC +
Preference number: 6 (lower is better)
Translates to: EPHCCICLHTVC*EPHSQPRTAPS
Trigger: GCTTGGCGCTGTCCGTGGCTGTGAATGTGGCTCCCAGCAGACTGTGTGCAGGCAGATACAGCAATGAGGTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp TTGCAGAGCCCTTTCACGGCTCCCTCTGGCAGATCTTaGCCGGCGATGCATCGCCCCAGTTCACTGAGAATC +
Preference number: 6 (lower is better)
Translates to: LQSPFTAPSGRS*PAMHRPSSLRI
Trigger: GATTCTCAGTGAACTGGGGCGATGCATCGCCGGCAAAGATCTGCCAGAGGGAGCCGTGAAAGGGCTCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp CAGGTCAGAGCCAGCAAGGCAGCTGAGCCGCTACTCTaGCTGGGAACACATGCTTTGGAGCCAACCCCTGAA +
Preference number: 6 (lower is better)
Translates to: QVRASKAAEPLL*LGTHALEPTPE
Trigger: TTCAGGGGTTGGCTCCAAAGCATGTGTTCCCAGCAAGAGTAGCGGCTCAGCTGCCTTGCTGGCTCTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp TTTCCTTCTGAGCCTCCAAGGATCGCAAACAGGTGCTaGGTCAGGGCCTCAGTGGCGGAGGAGTCACTGCAC +
Preference number: 6 (lower is better)
Translates to: FPSEPPRIANRC*VRASVAEESLH
Trigger: GTGCAGTGACTCCTCCGCCACTGAGGCCCTGACCAAGCACCTGTTTGCGATCCTTGGAGGCTCAGAAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp TCCGTAAGCTTCTTGGGCACTTCTGTAGTGAACCGGTaGCACCAGAGCGCCAGGATGGAGACGGCGTGTACC +
Preference number: 6 (lower is better)
Translates to: SVSFLGTSVVNR*HQSARMETACT
Trigger: GGTACACGCCGTCTCCATCCTGGCGCTCTGGTGCAACCGGTTCACTACAGAAGTGCCCAAGAAGCTTACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp AGCTGGTTACCAGCGTCCAGCTTCTTGGTGATGGCATaGAGAGCGTCCCAGCTCTCCTCCAGAACCACAGGG +
Preference number: 6 (lower is better)
Translates to: SWLPASSFLVMA*RASQLSSRTTG
Trigger: CCCTGTGGTTCTGGAGGAGAGCTGGGACGCTCTCAATGCCATCACCAAGAAGCTGGACGCTGGTAACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp CGAGAGGCTGCGTCTCTATATCGATGCAGTGTCAAGCAGAACAACTaGCAGAGCCCTTTCACGGCTCCCTCTGGCAGATCTTTGCCGGCG +
Preference number: 6 (lower is better)
Translates to: REAASLYRCSVKQNN*QSPFTAPSGRSLPA
Trigger: CGCCGGCAAAGATCTGCCAGAGGGAGCCGTGAAAGGGCTCTGCAAGTTGTTCTGCTTGACACTGCATCGATATAGAGACGCAGCCTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp GCCTTCTGCACTTTGACGTGGGAGTCTGTCAGCACTTCTGTGAGCTaGGGCACAATGTTGGGCAGGCAGGACGACAGCTGCTTAGGTGCA +
Preference number: 6 (lower is better)
Translates to: AFCTLTWESVSTSVS*GTMLGRQDDSCLGA
Trigger: TGCACCTAAGCAGCTGTCGTCCTGCCTGCCCAACATTGTGCCCAAGCTCACAGAAGTGCTGACAGACTCCCACGTCAAAGTGCAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp ACAGAGCCAATCTGCCTGAGGGCCTGCTGTCCAGCCTTCTGCACTTaGACGTGGGAGTCTGTCAGCACTTCTGTGAGCTTGGGCACAATG +
Preference number: 6 (lower is better)
Translates to: TEPICLRACCPAFCT*TWESVSTSVSLGTM
Trigger: CATTGTGCCCAAGCTCACAGAAGTGCTGACAGACTCCCACGTCAAAGTGCAGAAGGCTGGACAGCAGGCCCTCAGGCAGATTGGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp TGGAGTTCTTCGATCAGGGCCAGCTGGTTACCAGCGTCCAGCTTCTaGGTGATGGCATTGAGAGCGTCCCAGCTCTCCTCCAGAACCACA +
Preference number: 6 (lower is better)
Translates to: WSSSIRASWLPASSF*VMALRASQLSSRTT
Trigger: TGTGGTTCTGGAGGAGAGCTGGGACGCTCTCAATGCCATCACCAAGAAGCTGGACGCTGGTAACCAGCTGGCCCTGATCGAAGAACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GCAGATCTTTGCCGGCGATGCATCGCCCCAGTTCACTaGGAATCTCTCTCCGCTCCTTCACACTGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: ADLCRRCIAPVH*ESLSAPSHWLL
Trigger: CAACAGCCAGTGTGAAGGAGCGGAGAGAGATTCTCAGTGAACTGGGGCGATGCATCGCCGGCAAAGATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp TTGCCAAGCCTTTCACGATGTCCAGGGCGTACTGGCTaGGATCGAGTGTCACTGAAGCCAGCAGGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: LPSLSRCPGRTG*DRVSLKPAGWR
Trigger: TCTCCAGCCTGCTGGCTTCAGTGACACTCGATCTCAGCCAGTACGCCCTGGACATCGTGAAAGGCTTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp TTCAGGGGACTCTGTGTCGTGATCCTGGGGATGATCTaGTCCAGGTGCCTGGTGATGAAGGCGTCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: FRGLCVVILGMI*SRCLVMKASGS
Trigger: TGACCCTGACGCCTTCATCACCAGGCACCTGGATCAGATCATCCCCAGGATCACGACACAGAGTCCCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp TGGATTTATCAAACAGCTCCCCGGCAGGGGTCTGCATaGTGGAGAACTCCTCCCGAGTCACAAGGCACAGGG +
Preference number: 6 (lower is better)
Translates to: WIYQTAPRQGSA*WRTPPESQGTG
Trigger: CCCTGTGCCTTGTGACTCGGGAGGAGTTCTCCATCATGCAGACCCCTGCCGGGGAGCTGTTTGATAAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp CTCGATGATGATCCGGTGCCCAGTGTCATCCTCCACTaGGAGGATCACAGCCTGACAGTTGGCCATCTCCAG +
Preference number: 6 (lower is better)
Translates to: LDDDPVPSVILH*EDHSLTVGHLQ
Trigger: CTGGAGATGGCCAACTGTCAGGCTGTGATCCTCTCAGTGGAGGATGACACTGGGCACCGGATCATCATCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GCAGCTGCCCGCTTCCTGTCTCGATGTGATACTTCATaGGGAAGCCCATGCCTCGAATCCCACTCATGGCGA +
Preference number: 6 (lower is better)
Translates to: AAARFLSRCDTS*GSPCLESHSWR
Trigger: TCGCCATGAGTGGGATTCGAGGCATGGGCTTCCTCATGAAGTATCACATCGAGACAGGAAGCGGGCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp TGGCTGGGCTCCAGGCTAAGGATGGCTGAGAAGTACTaGTCCACCAGCCCAGGGTTCTCCTTCCATAGCTTA +
Preference number: 6 (lower is better)
Translates to: WLGSRLRMAEKY*STSPGFSFHSL
Trigger: TAAGCTATGGAAGGAGAACCCTGGGCTGGTGGAGCAGTACTTCTCAGCCATCCTTAGCCTGGAGCCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp TGGAGATCCGAGTGTTGTCCTCGTCATGGCCCAGCATaGTCAGCAGGAGCGAGACCAGGTTTTTCCGAATGG +
Preference number: 6 (lower is better)
Translates to: WRSECCPRHGPA*SAGARPGFSEW
Trigger: CCATTCGGAAAAACCTGGTCTCGCTCCTGCTGAGCATGCTGGGCCATGACGAGGACAACACTCGGATCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp TTCTCGGCCACCAGCCTGATGTCACTACATGGGTTCTaGAGACACTTGATGAGAAGGCTGGAGAGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: FSATSLMSLHGF*RHLMRRLESLG
Trigger: CCCCAGGCTCTCCAGCCTTCTCATCAAGTGTCTGCAGAACCCATGTAGTGACATCAGGCTGGTGGCCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CAGCTGAGCCGCTACTCTTGCTGGGAACACATGCTTTaGAGCCAACCCCTGAAGACTGGAGAGAGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: QLSRYSCWEHML*SQPLKTGESAG
Trigger: TCCTGCACTCTCTCCAGTCTTCAGGGGTTGGCTCCAAAGCATGTGTTCCCAGCAAGAGTAGCGGCTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp TCAGAGCCAGCAAGGCAGCTGAGCCGCTACTCTTGCTaGGAACACATGCTTTGGAGCCAACCCCTGAAGACT +
Preference number: 6 (lower is better)
Translates to: SEPARQLSRYSC*EHMLWSQPLKT
Trigger: AGTCTTCAGGGGTTGGCTCCAAAGCATGTGTTCCCAGCAAGAGTAGCGGCTCAGCTGCCTTGCTGGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CCTCCACCAGCTTGTTCCAGATGTCTCCTTGCCGCTTaGCCTTCAGGGGAAAGACAATTCGCACTAGGAGGC +
Preference number: 6 (lower is better)
Translates to: PPPACSRCLLAA*PSGERQFALGG
Trigger: GCCTCCTAGTGCGAATTGTCTTTCCCCTGAAGGCCAAGCGGCAAGGAGACATCTGGAACAAGCTGGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GGAGCTCTGCTCGTACGTCAGAGTCTCCATCAGCCATaGCAGCAAATCTTCAAAGCACGACTCCCCCATGCC +
Preference number: 6 (lower is better)
Translates to: GALLVRQSLHQP*QQIFKARLPHA
Trigger: GGCATGGGGGAGTCGTGCTTTGAAGATTTGCTGCCATGGCTGATGGAGACTCTGACGTACGAGCAGAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp TCTGAGTGGGACATGAACCGGAGCAAGGGGGCACAGTaGTCCAGCAAGTACTTGGGAGGCTTGGCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: SEWDMNRSKGAQ*SSKYLGGLALL
Trigger: GAGCAAAGCCAAGCCTCCCAAGTACTTGCTGGACAACTGTGCCCCCTTGCTCCGGTTCATGTCCCACTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp GAGTCTGTCAGCACTTCTGTGAGCTTGGGCACAATGTaGGGCAGGCAGGACGACAGCTGCTTAGGTGCACAG +
Preference number: 6 (lower is better)
Translates to: ESVSTSVSLGTM*GRQDDSCLGAQ
Trigger: CTGTGCACCTAAGCAGCTGTCGTCCTGCCTGCCCAACATTGTGCCCAAGCTCACAGAAGTGCTGACAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp ACTTTGACGTGGGAGTCTGTCAGCACTTCTGTGAGCTaGGGCACAATGTTGGGCAGGCAGGACGACAGCTGC +
Preference number: 6 (lower is better)
Translates to: TLTWESVSTSVS*GTMLGRQDDSC
Trigger: GCAGCTGTCGTCCTGCCTGCCCAACATTGTGCCCAAGCTCACAGAAGTGCTGACAGACTCCCACGTCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp TTGAACCAGTCCGTAAGCTTCTTGGGCACTTCTGTAGTGAACCGGTaGCACCAGAGCGCCAGGATGGAGACGGCGTGTACCAAGGTACCT +
Preference number: 6 (lower is better)
Translates to: LNQSVSFLGTSVVNR*HQSARMETACTKVP
Trigger: AGGTACCTTGGTACACGCCGTCTCCATCCTGGCGCTCTGGTGCAACCGGTTCACTACAGAAGTGCCCAAGAAGCTTACGGACTGGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp TTGGCAACAATAGGTTTAACTTTGGGGTCACTCTTGTCCAGGTGTTaGGCCAGAGACCCCATGAGGACCACCACGCTCTGCCGCACAGCG +
Preference number: 6 (lower is better)
Translates to: LATIGLTLGSLLSRC*ARDPMRTTTLCRTA
Trigger: CGCTGTGCGGCAGAGCGTGGTGGTCCTCATGGGGTCTCTGGCCAAACACCTGGACAAGAGTGACCCCAAAGTTAAACCTATTGTTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp TTGACGTGGGAGTCTGTCAGCACTTCTGTGAGCTTGGGCACAATGTaGGGCAGGCAGGACGACAGCTGCTTAGGTGCACAGTACGCCATT +
Preference number: 6 (lower is better)
Translates to: LTWESVSTSVSLGTM*GRQDDSCLGAQYAI
Trigger: AATGGCGTACTGTGCACCTAAGCAGCTGTCGTCCTGCCTGCCCAACATTGTGCCCAAGCTCACAGAAGTGCTGACAGACTCCCACGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp AGGTACCTTCGTGCACTTCCTGCTGCAGGAAGGGGATaGACAGCTCAGCCACACAGCCATTCAGGACTTGAC +
Preference number: 6 (lower is better)
Translates to: RYLRALPAAGRG*TAQPHSHSGLD
Trigger: GTCAAGTCCTGAATGGCTGTGTGGCTGAGCTGTTCATCCCCTTCCTGCAGCAGGAAGTGCACGAAGGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp CGTCCTCTGAAGCCAGGAGCAGGAACTTCTCAGACGTaGAAGTCTGCCTCTTCTCATCCACAACCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: RPLKPGAGTSQT*KSASSHPQPAA
Trigger: GGCAGCTGGTTGTGGATGAGAAGAGGCAGACTTTCACGTCTGAGAAGTTCCTGCTCCTGGCTTCAGAGGACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CTGGGAGGCCGCCTTCTCTACTGTCTGCATAAGCAATaGCAGAAAGTCCAAGGCCTGCAACAGTGTGTCACC +
Preference number: 6 (lower is better)
Translates to: LGGRLLYCLHKQ*QKVQGLQQCVT
Trigger: GGTGACACACTGTTGCAGGCCTTGGACTTTCTGCCATTGCTTATGCAGACAGTAGAGAAGGCGGCCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GGTCCAAGAGTGAAGCTTTCAGGCCAGGTGTCACACTaGGCAGGTAAGGAGCCAAGTCCTTCTGGTCTGTCA +
Preference number: 6 (lower is better)
Translates to: GPRVKLSGQVSH*AGKEPSPSGLS
Trigger: TGACAGACCAGAAGGACTTGGCTCCTTACCTGCCCAGTGTGACACCTGGCCTGAAAGCTTCACTCTTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp TCACGTAGAACTCCAGCAGGGTGCTCTTATGCTGGCTaGCCGCGTCCATCTCTTTGTGGTTCGTGCAGAACT +
Preference number: 6 (lower is better)
Translates to: SRRTPAGCSYAG*PRPSLCGSCRT
Trigger: AGTTCTGCACGAACCACAAAGAGATGGACGCGGTCAGCCAGCATAAGAGCACCCTGCTGGAGTTCTACGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GCGTCCGTCACAAGAGCCTCCAAGGGAAGCACCTTGTaGGAGTTGAGGACAGTCTTCAGTTCGTCCAAGAGA +
Preference number: 6 (lower is better)
Translates to: ASVTRASKGSTL*ELRTVFSSSKR
Trigger: TCTCTTGGACGAACTGAAGACTGTCCTCAACTCTCACAAGGTGCTTCCCTTGGAGGCTCTTGTGACGGACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp AGCCTGGCACGTGCTCCCCTTTGCATTCGTTGCCTATaGAGCGGATTTCCTTGTGGAGTTCTTCGATCAGGG +
Preference number: 6 (lower is better)
Translates to: SLARAPLCIRCL*SGFPCGVLRSG
Trigger: CCCTGATCGAAGAACTCCACAAGGAAATCCGCTTCATAGGCAACGAATGCAAAGGGGAGCACGTGCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp ATCCTGTCTGCCACGGCGTTGCTGAGGATCATGTCCTaGACCTCATTGCTGTATCTGCCTGCACACAGTCTG +
Preference number: 6 (lower is better)
Translates to: ILSATALLRIMS*TSLLYLPAHSL
Trigger: CAGACTGTGTGCAGGCAGATACAGCAATGAGGTTCAGGACATGATCCTCAGCAACGCCGTGGCAGACAGGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp TGCAGGGCTCTGCGAGAGGCTGCGTCTCTATATCGATaGAGTGTCAAGCAGAACAACTTGCAGAGCCCTTTC +
Preference number: 6 (lower is better)
Translates to: CRALREAASLYR*SVKQNNLQSPF
Trigger: GAAAGGGCTCTGCAAGTTGTTCTGCTTGACACTGCATCGATATAGAGACGCAGCCTCTCGCAGAGCCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GAAGCCAGGAGCAGGAACTTCTCAGACGTGAAAGTCTaGCTCTTCTCATCCACAACCAGCTGCCAAAAGCCG +
Preference number: 6 (lower is better)
Translates to: EARSRNFSDVKV*LFSSTTSCQKP
Trigger: CGGCTTTTGGCAGCTGGTTGTGGATGAGAAGAGGCAGACTTTCACGTCTGAGAAGTTCCTGCTCCTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp ATGATGGATTTATCAAACAGCTCCCCGGCAGGGGTCTaGATGATGGAGAACTCCTCCCGAGTCACAAGGCAC +
Preference number: 6 (lower is better)
Translates to: MMDLSNSSPAGV*MMENSSRVTRH
Trigger: GTGCCTTGTGACTCGGGAGGAGTTCTCCATCATGCAGACCCCTGCCGGGGAGCTGTTTGATAAATCCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GCCTCCTTGTCCATCTGGGCTTGCAGCATCTCCTTCTaGTTGCTGGTCAGCTGTACCTCCTCTTTTATGCCT +
Preference number: 6 (lower is better)
Translates to: ASLSIWACSISF*LLVSCTSSFMP
Trigger: AGGCATAAAAGAGGAGGTACAGCTGACCAGCAAGCAGAAGGAGATGCTGCAAGCCCAGATGGACAAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GCAAAGAGCAGAGATCTGACTGCAGATCGAGGCCCATaGTTGACCAAAGCCTTTCGGCCAGCTTCCGTATCT +
Preference number: 6 (lower is better)
Translates to: AKSRDLTADRGP*LTKAFRPASVS
Trigger: AGATACGGAAGCTGGCCGAAAGGCTTTGGTCAACCATGGGCCTCGATCTGCAGTCAGATCTCTGCTCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp TCACACCGTGAGCACTCAAATTGCTCATCACAGCTTTaGCACAGTCATCTGCAGCCTCGCGCACGTACTGGT +
Preference number: 6 (lower is better)
Translates to: SHREHSNCSSQL*HSHLQPRARTG
Trigger: ACCAGTACGTGCGCGAGGCTGCAGATGACTGTGCCAAAGCTGTGATGAGCAATTTGAGTGCTCACGGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp TTCAGTAGGAACGGGAGAATGTCCTCCAAAGCCTGGTaGCCAATGGTGGAGTGCAGCTGCTCAAAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: FSRNGRMSSKAW*PMVECSCSKVL
Trigger: CAAGACCTTTGAGCAGCTGCACTCCACCATTGGCCACCAGGCTTTGGAGGACATTCTCCCGTTCCTACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CGGATTTCCTTGTGGAGTTCTTCGATCAGGGCCAGCTaGTTACCAGCGTCCAGCTTCTTGGTGATGGCATTG +
Preference number: 6 (lower is better)
Translates to: RISLWSSSIRAS*LPASSFLVMAL
Trigger: CAATGCCATCACCAAGAAGCTGGACGCTGGTAACCAGCTGGCCCTGATCGAAGAACTCCACAAGGAAATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp GAGTTGAGGACAGTCTTCAGTTCGTCCAAGAGACCATaGGCCAGCTTAACACCCCCAAGAGAGGACAGCAGC +
Preference number: 6 (lower is better)
Translates to: ELRTVFSSSKRP*ASLTPPREDSS
Trigger: GCTGCTGTCCTCTCTTGGGGGTGTTAAGCTGGCCAATGGTCTCTTGGACGAACTGAAGACTGTCCTCAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp GCGTGCCGCACTGCAGAGGTGGACGTTTTAAGGCTGAAGACTTTCTaGAACCAGTCCGTAAGCTTCTTGGGCACTTCTGTAGTGAACCGG +
Preference number: 6 (lower is better)
Translates to: ACRTAEVDVLRLKTF*NQSVSFLGTSVVNR
Trigger: CCGGTTCACTACAGAAGTGCCCAAGAAGCTTACGGACTGGTTCAAGAAAGTCTTCAGCCTTAAAACGTCCACCTCTGCAGTGCGGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp ATGGTTGACCAAAGCCTTTCGGCCAGCTTCCGTATCTCATCCTCCTaGTCGAACTTAATGACCCAGAGTCTCCGCAACAGGCTCAGGCCA +
Preference number: 6 (lower is better)
Translates to: MVDQSLSASFRISSS*SNLMTQSLRNRLRP
Trigger: TGGCCTGAGCCTGTTGCGGAGACTCTGGGTCATTAAGTTCGACAAGGAGGATGAGATACGGAAGCTGGCCGAAAGGCTTTGGTCAACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp CGATCAGCAAAGAGCAGAGATCTGACTGCAGATCGAGGCCCATGGTaGACCAAAGCCTTTCGGCCAGCTTCCGTATCTCATCCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: RSAKSRDLTADRGPW*TKAFRPASVSHPPC
Trigger: ACAAGGAGGATGAGATACGGAAGCTGGCCGAAAGGCTTTGGTCAACCATGGGCCTCGATCTGCAGTCAGATCTCTGCTCTTTGCTGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp GCGGCAATGAGTTTGGCAACAATAGGTTTAACTTTGGGGTCACTCTaGTCCAGGTGTTTGGCCAGAGACCCCATGAGGACCACCACGCTC +
Preference number: 6 (lower is better)
Translates to: AAMSLATIGLTLGSL*SRCLARDPMRTTTL
Trigger: GAGCGTGGTGGTCCTCATGGGGTCTCTGGCCAAACACCTGGACAAGAGTGACCCCAAAGTTAAACCTATTGTTGCCAAACTCATTGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp GGTGTGGAGAGGGCGGCAATGAGTTTGGCAACAATAGGTTTAACTTaGGGGTCACTCTTGTCCAGGTGTTTGGCCAGAGACCCCATGAGG +
Preference number: 6 (lower is better)
Translates to: GVERAAMSLATIGLT*GSLLSRCLARDPMR
Trigger: CCTCATGGGGTCTCTGGCCAAACACCTGGACAAGAGTGACCCCAAAGTTAAACCTATTGTTGCCAAACTCATTGCCGCCCTCTCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp CTCTTTGGAAGACAGAAGCCTGGCACGTGCTCCCCTTTGCATTCGTaGCCTATGAAGCGGATTTCCTTGTGGAGTTCTTCGATCAGGGCC +
Preference number: 6 (lower is better)
Translates to: LFGRQKPGTCSPLHS*PMKRISLWSSSIRA
Trigger: GGCCCTGATCGAAGAACTCCACAAGGAAATCCGCTTCATAGGCAACGAATGCAAAGGGGAGCACGTGCCAGGCTTCTGTCTTCCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GCATCCGGGACAAAGAACTGGAAAAGCGGCTTCACCTaGGAGCTATCCAAGTACTGCGAGAGCTTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: ASGTKNWKSGFT*ELSKYCESLFR
Trigger: CCTGAACAAGCTCTCGCAGTACTTGGATAGCTCTCAGGTGAAGCCGCTTTTCCAGTTCTTTGTCCCGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GCAGCTAACAAGGACGGGAGCACCAACTTCACACCGTaGGCACTCAAATTGCTCATCACAGCTTTGGCACAG +
Preference number: 6 (lower is better)
Translates to: AANKDGSTNFTP*ALKLLITALAQ
Trigger: CTGTGCCAAAGCTGTGATGAGCAATTTGAGTGCTCACGGTGTGAAGTTGGTGCTCCCGTCCTTGTTAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp ATACGTCAGCTAGCAGGCACTGCTGAAGGACAGTGTTaGGCTCTTCGTCAGTCAGAAAGGCACACAGTTCCC +
Preference number: 6 (lower is better)
Translates to: IRQLAGTAEGQC*ALRQSERHTVP
Trigger: GGGAACTGTGTGCCTTTCTGACTGACGAAGAGCTCAACACTGTCCTTCAGCAGTGCCTGCTAGCTGACGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp ACGGGAGCACCAACTTCACACCGTGAGCACTCAAATTaGTCATCACAGCTTTGGCACAGTCATCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: TGAPTSHREHSN*SSQLWHSHLQP
Trigger: AGGCTGCAGATGACTGTGCCAAAGCTGTGATGAGCAATTTGAGTGCTCACGGTGTGAAGTTGGTGCTCCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GTCTGTCAGGGAGTACATGTTGCCAATAATCTGCGCTaGCATCTTTCGTGTGTCTGTGGAGCGGTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: VCQGVHVANNLR*HLSCVCGAVLE
Trigger: TTCCAGGACCGCTCCACAGACACACGAAAGATGGCAGCGCAGATTATTGGCAACATGTACTCCCTGACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp TTCTGGTCTGTCAGGGAGTACATGTTGCCAATAATCTaGGCTGCCATCTTTCGTGTGTCTGTGGAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: FWSVREYMLPII*AAIFRVSVERS
Trigger: GGACCGCTCCACAGACACACGAAAGATGGCAGCGCAGATTATTGGCAACATGTACTCCCTGACAGACCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp GTTACTCCCCTCTTTGGAAGACAGAAGCCTGGCACGTaGTCCCCTTTGCATTCGTTGCCTATGAAGCGGATT +
Preference number: 6 (lower is better)
Translates to: VTPLFGRQKPGT*SPLHSLPMKRI
Trigger: AATCCGCTTCATAGGCAACGAATGCAAAGGGGAGCACGTGCCAGGCTTCTGTCTTCCAAAGAGGGGAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp ACCGGAGCAAGGGGGCACAGTTGTCCAGCAAGTACTTaGGAGGCTTGGCTTTGCTCATCAGAATGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: TGARGHSCPAST*EAWLCSSECSS
Trigger: TGAAGAACATTCTGATGAGCAAAGCCAAGCCTCCCAAGTACTTGCTGGACAACTGTGCCCCCTTGCTCCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp TGTATGGTGGGCAGAATCAGATCCTTAAACTCTGAGTaGGACATGAACCGGAGCAAGGGGGCACAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: CMVGRIRSLNSE*DMNRSKGAQLS
Trigger: GGACAACTGTGCCCCCTTGCTCCGGTTCATGTCCCACTCAGAGTTTAAGGATCTGATTCTGCCCACCATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CCTTTGCATTCGTTGCCTATGAAGCGGATTTCCTTGTaGAGTTCTTCGATCAGGGCCAGCTGGTTACCAGCG +
Preference number: 6 (lower is better)
Translates to: PLHSLPMKRISL*SSSIRASWLPA
Trigger: CGCTGGTAACCAGCTGGCCCTGATCGAAGAACTCCACAAGGAAATCCGCTTCATAGGCAACGAATGCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GATGGAGGTTACTCCCCTCTTTGGAAGACAGAAGCCTaGCACGTGCTCCCCTTTGCATTCGTTGCCTATGAA +
Preference number: 6 (lower is better)
Translates to: DGGYSPLWKTEA*HVLPFAFVAYE
Trigger: TTCATAGGCAACGAATGCAAAGGGGAGCACGTGCCAGGCTTCTGTCTTCCAAAGAGGGGAGTAACCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp GATCATCTTCTCGGCCACCAGCCTGATGTCACTACATaGGTTCTGCAGACACTTGATGAGAAGGCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: DHLLGHQPDVTT*VLQTLDEKAGE
Trigger: CTCTCCAGCCTTCTCATCAAGTGTCTGCAGAACCCATGTAGTGACATCAGGCTGGTGGCCGAGAAGATGATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp GCGTCTCTATATCGATGCAGTGTCAAGCAGAACAACTaGCAGAGCCCTTTCACGGCTCCCTCTGGCAGATCT +
Preference number: 6 (lower is better)
Translates to: ASLYRCSVKQNN*QSPFTAPSGRS
Trigger: AGATCTGCCAGAGGGAGCCGTGAAAGGGCTCTGCAAGTTGTTCTGCTTGACACTGCATCGATATAGAGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp CAAAGCCTTTCGGCCAGCTTCCGTATCTCATCCTCCTaGTCGAACTTAATGACCCAGAGTCTCCGCAACAGG +
Preference number: 6 (lower is better)
Translates to: QSLSASFRISSS*SNLMTQSLRNR
Trigger: CCTGTTGCGGAGACTCTGGGTCATTAAGTTCGACAAGGAGGATGAGATACGGAAGCTGGCCGAAAGGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp AGACAGAAGCCTGGCACGTGCTCCCCTTTGCATTCGTaGCCTATGAAGCGGATTTCCTTGTGGAGTTCTTCG +
Preference number: 6 (lower is better)
Translates to: RQKPGTCSPLHS*PMKRISLWSSS
Trigger: CGAAGAACTCCACAAGGAAATCCGCTTCATAGGCAACGAATGCAAAGGGGAGCACGTGCCAGGCTTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp CTCTTTGGAAGACAGAAGCCTGGCACGTGCTCCCCTTaGCATTCGTTGCCTATGAAGCGGATTTCCTTGTGG +
Preference number: 6 (lower is better)
Translates to: LFGRQKPGTCSP*HSLPMKRISLW
Trigger: CCACAAGGAAATCCGCTTCATAGGCAACGAATGCAAAGGGGAGCACGTGCCAGGCTTCTGTCTTCCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 90 bp GTTACTCCCCTCTTTGGAAGACAGAAGCCTGGCACGTGCTCCCCTTaGCATTCGTTGCCTATGAAGCGGATTTCCTTGTGGAGTTCTTCG +
Preference number: 6 (lower is better)
Translates to: VTPLFGRQKPGTCSP*HSLPMKRISLWSSS
Trigger: CGAAGAACTCCACAAGGAAATCCGCTTCATAGGCAACGAATGCAAAGGGGAGCACGTGCCAGGCTTCTGTCTTCCAAAGAGGGGAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp ACCCCAGAGATGTGGAACAGGAGGTCCCCAAGAAGTTaGACAGAGCTGAACCGTATTCTCCAGAGGTCATCA +
Preference number: 6 (lower is better)
Translates to: TPEMWNRRSPRS*TELNRILQRSS
Trigger: TGATGACCTCTGGAGAATACGGTTCAGCTCTGTTCAACTTCTTGGGGACCTCCTGTTCCACATCTCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp CAGTCAATGCCAGATACGTCAGCTAGCAGGCACTGCTaGAGGACAGTGTTGAGCTCTTCGTCAGTCAGAAAG +
Preference number: 6 (lower is better)
Translates to: QSMPDTSASRHC*RTVLSSSSVRK
Trigger: CTTTCTGACTGACGAAGAGCTCAACACTGTCCTTCAGCAGTGCCTGCTAGCTGACGTATCTGGCATTGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CGTCTCTATATCGATGCAGTGTCAAGCAGAACAACTTaGAGAGCCCTTTCACGGCTCCCTCTGGCAGATCTT +
Preference number: 6 (lower is better)
Translates to: RLYIDAVSSRTT*RALSRLPLADL
Trigger: AAGATCTGCCAGAGGGAGCCGTGAAAGGGCTCTGCAAGTTGTTCTGCTTGACACTGCATCGATATAGAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CCTTGTCCATCTGGGCTTGCAGCATCTCCTTCTGCTTaGTGGTCAGCTGTACCTCCTCTTTTATGCCTTTCT +
Preference number: 6 (lower is better)
Translates to: PCPSGLAASPSA*WSAVPPLLCLS
Trigger: AGAAAGGCATAAAAGAGGAGGTACAGCTGACCAGCAAGCAGAAGGAGATGCTGCAAGCCCAGATGGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp ATCACGTCATCGATCAGCAAAGAGCAGAGATCTGACTaGAGATCGAGGCCCATGGTTGACCAAAGCCTTTCG +
Preference number: 6 (lower is better)
Translates to: ITSSISKEQRSD*RSRPMVDQSLS
Trigger: CGAAAGGCTTTGGTCAACCATGGGCCTCGATCTGCAGTCAGATCTCTGCTCTTTGCTGATCGATGACGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp AGCCAGCAGGCTGGAGATAGTTTCAATAACATTCTCTaGGCTCCTCAGCAAGGACTTCTGTATGGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: SQQAGDSFNNIL*APQQGLLYGGQ
Trigger: CTGCCCACCATACAGAAGTCCTTGCTGAGGAGCCCAGAGAATGTTATTGAAACTATCTCCAGCCTGCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp AGGCTGAAGACTTTCTTGAACCAGTCCGTAAGCTTCTaGGGCACTTCTGTAGTGAACCGGTTGCACCAGAGC +
Preference number: 6 (lower is better)
Translates to: RLKTFLNQSVSF*GTSVVNRLHQS
Trigger: GCTCTGGTGCAACCGGTTCACTACAGAAGTGCCCAAGAAGCTTACGGACTGGTTCAAGAAAGTCTTCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp TCCTTGTCCATCTGGGCTTGCAGCATCTCCTTCTGCTaGCTGGTCAGCTGTACCTCCTCTTTTATGCCTTTC +
Preference number: 6 (lower is better)
Translates to: SLSIWACSISFC*LVSCTSSFMPF
Trigger: GAAAGGCATAAAAGAGGAGGTACAGCTGACCAGCAAGCAGAAGGAGATGCTGCAAGCCCAGATGGACAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp GATGTCCAGGGCGTACTGGCTGAGATCGAGTGTCACTaGAGCCAGCAGGCTGGAGATAGTTTCAATAACATT +
Preference number: 6 (lower is better)
Translates to: DVQGVLAEIECH*SQQAGDSFNNI
Trigger: AATGTTATTGAAACTATCTCCAGCCTGCTGGCTTCAGTGACACTCGATCTCAGCCAGTACGCCCTGGACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp AGGGGGCACAGTTGTCCAGCAAGTACTTGGGAGGCTTaGCTTTGCTCATCAGAATGTTCTTCACGTAGAACT +
Preference number: 6 (lower is better)
Translates to: RGHSCPASTWEA*LCSSECSSRRT
Trigger: AGTTCTACGTGAAGAACATTCTGATGAGCAAAGCCAAGCCTCCCAAGTACTTGCTGGACAACTGTGCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CCA 72 bp CTGAGGCTTCCAATCCCTGAAAGGACACTCATCTTCTaGGCTATGATGGTTAGCTTTCCTTCTGAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: LRLPIPERTLIF*AMMVSFPSEPP
Trigger: TGGAGGCTCAGAAGGAAAGCTAACCATCATAGCCCAGAAGATGAGTGTCCTTTCAGGGATTGGAAGCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp AGTTTGGCAACAATAGGTTTAACTTTGGGGTCACTCTaGTCCAGGTGTTTGGCCAGAGACCCCATGAGGACC +
Preference number: 6 (lower is better)
Translates to: SLATIGLTLGSL*SRCLARDPMRT
Trigger: GGTCCTCATGGGGTCTCTGGCCAAACACCTGGACAAGAGTGACCCCAAAGTTAAACCTATTGTTGCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp AGGGCGGCAATGAGTTTGGCAACAATAGGTTTAACTTaGGGGTCACTCTTGTCCAGGTGTTTGGCCAGAGAC +
Preference number: 6 (lower is better)
Translates to: RAAMSLATIGLT*GSLLSRCLARD
Trigger: GTCTCTGGCCAAACACCTGGACAAGAGTGACCCCAAAGTTAAACCTATTGTTGCCAAACTCATTGCCGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS TCA 72 bp TTCCAATCCCTGAAAGGACACTCATCTTCTGGGCTATaGTGGTTAGCTTTCCTTCTGAGCCTCCAAGGATCG +
Preference number: 6 (lower is better)
Translates to: FQSLKGHSSSGL*WLAFLLSLQGS
Trigger: CGATCCTTGGAGGCTCAGAAGGAAAGCTAACCATCATAGCCCAGAAGATGAGTGTCCTTTCAGGGATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS GCA 72 bp CACAGTTGTCCAGCAAGTACTTGGGAGGCTTGGCTTTaGTCATCAGAATGTTCTTCACGTAGAACTCCAGCA +
Preference number: 6 (lower is better)
Translates to: HSCPASTWEAWL*SSECSSRRTPA
Trigger: TGCTGGAGTTCTACGTGAAGAACATTCTGATGAGCAAAGCCAAGCCTCCCAAGTACTTGCTGGACAACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12
CDS CAA 72 bp ACTGCAGAGGTGGACGTTTTAAGGCTGAAGACTTTCTaGAACCAGTCCGTAAGCTTCTTGGGCACTTCTGTA +
Preference number: 6 (lower is better)
Translates to: TAEVDVLRLKTF*NQSVSFLGTSV
Trigger: TACAGAAGTGCCCAAGAAGCTTACGGACTGGTTCAAGAAAGTCTTCAGCCTTAAAACGTCCACCTCTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064454.12