Pregenerated sensors for GCM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021362Ensembl transcript IDs: ENSMUST00000021791.8, ENSMUST00000225271.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCCAGCTCTCAACAGCACAGAAGGTCTTGCCAGTCAGTCACCACTaGGGAATCTTTAAAACAGGTGAGGCTTGGCTCCCCCTCCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: FQLSTAQKVLPVSHH*GIFKTGEAWLPLPC Trigger: GCAAGGGAGGGGGAGCCAAGCCTCACCTGTTTTAAAGATTCCTCAGTGGTGACTGACTGGCAAGACCTTCTGTGCTGTTGAGAGCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 90 bp | TACACGGCTATTAAGGGGTTAAAGGCACAGCTCTGGCCTCAGACCTaGAACTTTCCAGCTCTCAACAGCACAGAAGGTCTTGCCAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: YTAIKGLKAQLWPQT*NFPALNSTEGLASQ Trigger: CTGACTGGCAAGACCTTCTGTGCTGTTGAGAGCTGGAAAGTTGCAGGTCTGAGGCCAGAGCTGTGCCTTTAACCCCTTAATAGCCGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGAATCACATAAATGCACCCTTGGCGTaGGTTTTCTTGCATGTACTTCCTTGTCACCGTGTGTGTATCCTG | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVNHINAPLA*VFLHVLPCHRVCIL Trigger: CAGGATACACACACGGTGACAAGGAAGTACATGCAAGAAAACGCACGCCAAGGGTGCATTTATGTGATTCACACACACACACACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 90 bp | GTCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATCACATAAATaGACCCTTGGCGTGCGTTTTCTTGCATGTACTTCCTTGTCACCG | + |
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Preference number: 1 (lower is better) Translates to: VLCVCVCVCVCESHK*TLGVRFLACTSLSP Trigger: CGGTGACAAGGAAGTACATGCAAGAAAACGCACGCCAAGGGTGCATTTATGTGATTCACACACACACACACACACACACACACACAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CCA 90 bp | TCAGTTCACAGATGTCATAGCACCCAAGTTATGGAGGGCTCTTCTTaGTTTACAGATTTTTCAGCTGATGTATGGGAAAGCTTGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: SVHRCHSTQVMEGSS*FTDFSADVWESLQG Trigger: GCCCTGCAAGCTTTCCCATACATCAGCTGAAAAATCTGTAAACCAAGAAGAGCCCTCCATAACTTGGGTGCTATGACATCTGTGAACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CCA 90 bp | CCCACCTCTGAGTTTCAGTTCACAGATGTCATAGCACCCAAGTTATaGAGGGCTCTTCTTGGTTTACAGATTTTTCAGCTGATGTATGGG | + |
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Preference number: 1 (lower is better) Translates to: PTSEFQFTDVIAPKL*RALLGLQIFQLMYG Trigger: CCCATACATCAGCTGAAAAATCTGTAAACCAAGAAGAGCCCTCCATAACTTGGGTGCTATGACATCTGTGAACTGAAACTCAGAGGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 90 bp | GCTCTTCTTGGTTTACAGATTTTTCAGCTGATGTATGGGAAAGCTTaGAGGGCACTAAAACACTTGCCATGTTTCATACATTCCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: ALLGLQIFQLMYGKA*RALKHLPCFIHSSP Trigger: TGGAGAGGAATGTATGAAACATGGCAAGTGTTTTAGTGCCCTGCAAGCTTTCCCATACATCAGCTGAAAAATCTGTAAACCAAGAAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CCA 90 bp | GTTATGGAGGGCTCTTCTTGGTTTACAGATTTTTCAGCTGATGTATaGGAAAGCTTGCAGGGCACTAAAACACTTGCCATGTTTCATACA | + |
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Preference number: 1 (lower is better) Translates to: VMEGSSWFTDFSADV*ESLQGTKTLAMFHT Trigger: TGTATGAAACATGGCAAGTGTTTTAGTGCCCTGCAAGCTTTCCCATACATCAGCTGAAAAATCTGTAAACCAAGAAGAGCCCTCCATAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR CCA 90 bp | GATGACATTTTTAGCCTTTGGAGGAAGTGGAAACTTGGGGTTGGTTTGTACCCCAAAACAGGTGAGGCTTaGCTCCCCCTCCCTTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: DDIFSLWRKWKLGVGLYPKTGEA*LPLPCP Trigger: TGGGCAAGGGAGGGGGAGCCAAGCCTCACCTGTTTT...GGGGTACAAACCAACCCCAAGTTTCCACTTCCTCCAAAGGCTAAAAATGTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACTTGGGGTTGGTTTGTACTGGCTCCCCCTCCCTTaGCCACCTCTGAGTTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LDDIFSLWRKWKLGVGLYWLPLP*PPLSFS Trigger: ACTGAAACTCAGAGGTGGGCAAGGGAGGGGGAGCCA...GTACAAACCAACCCCAAGTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGAATCACATAAATGCACCCTaGGCGTGCGTTTTCTTGCATGTACTTCCTTGTCACCGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVNHINAP*ACVFLHVLPCHRVC Trigger: ACACACACGGTGACAAGGAAGTACATGCAAGAAAACGCACGCCAAGGGTGCATTTATGTGATTCACACACACACACACACACACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTGTTCATACACTGACTTGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCGCCATCTACAGTAAGTaGCATAGGCTCATCCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: KCSYTDLCLNQQVTGLSFAIYSK*HRLIPL Trigger: CAGGGGGATGAGCCTATGGCACTTACTGTAGATGGC...GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTCCCAGCATGCCTTTACACTCACTCTAGTCTTGTGTGTGTGTGTGTGTGTGAATGCACCCTTGGCGTaGGTTTTCTTGCATGTACTT | + |
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Preference number: 2 (lower is better) Translates to: ISQHAFTLTLVLCVCVCVNAPLA*VFLHVL Trigger: AAGTACATGCAAGAAAACGCACGCCAAGGGTGCATT...CACACACACACACACACACAAGACTAGAGTGAGTGTAAAGGCATGCTGGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CAA 90 bp | GGCTCTTCTTGGTTTACAGATTTTTCAGCTGATGTATGGGAAAGCTaGCAGGGCACTAAAACACTTGCCATGTTTCATACATTCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GSSWFTDFSADVWES*QGTKTLAMFHTFLS Trigger: GGAGAGGAATGTATGAAACATGGCAAGTGTTTTAGTGCCCTGCAAGCTTTCCCATACATCAGCTGAAAAATCTGTAAACCAAGAAGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTTCATACACTGACTTGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCTTTTCAGCTGATGTATaGGAAAGCTTGCAGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: KCSYTDLCLNQQVTGLSFFSADV*ESLQGT Trigger: AGTGCCCTGCAAGCTTTCCCATACATCAGCTGAAAA...GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR GCA 90 bp | TATAATTTCCCAGCATGCCTTTACACTCACTCTAGTCTTGTGTGTGTGTGTGTGTGTGAATCACATAAATaGACCCTTGGCGTGCGTTTT | + |
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Preference number: 2 (lower is better) Translates to: YNFPACLYTHSSLVCVCVCESHK*TLGVRF Trigger: AAAACGCACGCCAAGGGTGCATTTATGTGATTCACA...CACACACACACACACAAGACTAGAGTGAGTGTAAAGGCATGCTGGGAAATTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTGTGGAAATGCCAGGTAGGCAGGTTATATATAGTAAGGCAGAAAAAGATTTTAAAGGCACAGCTCTaGCCTCAGACCTGCAACTTT | + |
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Preference number: 2 (lower is better) Translates to: HLWKCQVGRLYIVRQKKILKAQL*PQTCNF Trigger: AAAGTTGCAGGTCTGAGGCCAGAGCTGTGCCTTTAA...AATCTTTTTCTGCCTTACTATATATAACCTGCCTACCTGGCATTTCCACAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTTCATACACTGACTTGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCTTGAAAAATCATCTGTaGAAATGCCAGGTAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: KCSYTDLCLNQQVTGLSFLKNHL*KCQVGR Trigger: CCTGCCTACCTGGCATTTCCACAGATGATTTTTCAA...GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CAA 90 bp | CTTGTGTCTAAATTGGTGACAGTTTTAAAGTGTTCATACACTGACTaGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCTGTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LVSKLVTVLKCSYTD*CLNQQVTGLSFCSQ Trigger: CTGAGAACAGAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTTTAAAACTGTCACCAATTTAGACACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGATTTTTATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGGATTCACTTAATAGGTaGTACACGGCTATTAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: KDFYGPKRLLDDIFSLWRDSLNR*YTAIKG Trigger: CCCCTTAATAGCCGTGTATCACCTATTAAGTGAATC...CCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCATAAAAATCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTGTGGAAATGCCAGGTAGGCAGGTTATATATAGTAAGGCAGAAAAAGATTATAGCCTATGTGGTGTaGCAGGTTTCAAAATGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HLWKCQVGRLYIVRQKKIIAYVV*QVSKCC Trigger: ACAGCATTTTGAAACCTGCCACACCACATAGGCTAT...AATCTTTTTCTGCCTTACTATATATAACCTGCCTACCTGGCATTTCCACAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR GCA 90 bp | ATATATAGTAAGGCAGAAAAAGATTTTTATGGGCCTAAGAGGCTACTTGATGACTGGCAGGTTTCAAAATaGTGTGCTAAGTTCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: IYSKAEKDFYGPKRLLDDWQVSK*CAKFQQ Trigger: CTGCTGGAACTTAGCACAGCATTTTGAAACCTGCCA...GTCATCAAGTAGCCTCTTAGGCCCATAAAAATCTTTTTCTGCCTTACTATATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 72 bp | AAGCCATCTACAGTAAGTGCCATAGGCTCATCCCCCTaGCTCAGCCCTCAGAGTGCTGGGATTTCTGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: KPSTVSAIGSSP*LSPQSAGISEL Trigger: CAGCTCAGAAATCCCAGCACTCTGAGGGCTGAGGCAGGGGGATGAGCCTATGGCACTTACTGTAGATGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR TCA 72 bp | TCAACAGCACAGAAGGTCTTGCCAGTCAGTCACCACTaGGGAATCTTTAAAACAGGTGAGGCTTGGCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: STAQKVLPVSHH*GIFKTGEAWLP Trigger: GGGGAGCCAAGCCTCACCTGTTTTAAAGATTCCTCAGTGGTGACTGACTGGCAAGACCTTCTGTGCTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 72 bp | ATTAAGGGGTTAAAGGCACAGCTCTGGCCTCAGACCTaGAACTTTCCAGCTCTCAACAGCACAGAAGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: IKGLKAQLWPQT*NFPALNSTEGL Trigger: AAGACCTTCTGTGCTGTTGAGAGCTGGAAAGTTGCAGGTCTGAGGCCAGAGCTGTGCCTTTAACCCCTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR CAA 90 bp | GATGACATTTTTAGCCTTTGGAGGAAGTGGAAACTTGGGGTTGGTTTGTACCCCGGTCAAACCAGGATATaGCAGGCTCCTCCAGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: DDIFSLWRKWKLGVGLYPGQTRI*QAPPAC Trigger: ACAAGCTGGAGGAGCCTGCAATATCCTGGTTTGACC...GGGGTACAAACCAACCCCAAGTTTCCACTTCCTCCAAAGGCTAAAAATGTCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CCA 72 bp | GGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTaGAGGAAGTGGAAACTTGGGGTTGGTTTGTACCCC | + |
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Preference number: 3 (lower is better) Translates to: GPKRLLDDIFSL*RKWKLGVGLYP Trigger: GGGGTACAAACCAACCCCAAGTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTGCCCCCAATAACATGTTCAAACATGGTGGGAGCAGTTTCATAGAGTTTGGAGGAAGTGGAAACTaGGGGTTGGTTTGTACCCCA | + |
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Preference number: 3 (lower is better) Translates to: LVAPNNMFKHGGSSFIEFGGSGN*GLVCTP Trigger: TGGGGTACAAACCAACCCCAAGTTTCCACTTCCTCC...AAACTCTATGAAACTGCTCCCACCATGTTTGAACATGTTATTGGGGGCAACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGAATCACATAAATGCACCCTTGGCGTaGGTTTTCTTGCATGTACTTCCTTGTCACCGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CVCVNHINAPLA*VFLHVLPCHRV Trigger: CACACGGTGACAAGGAAGTACATGCAAGAAAACGCACGCCAAGGGTGCATTTATGTGATTCACACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGAATCACATAAATaGACCCTTGGCGTGCGTTTTCTTGCATGTACTTCC | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCESHK*TLGVRFLACTS Trigger: GGAAGTACATGCAAGAAAACGCACGCCAAGGGTGCATTTATGTGATTCACACACACACACACACACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 72 bp | CTGCAACTTTCCAGCTCTCAACAGCACAGAAGGTCTTaGCAGTCAGTCACCACTGAGGAATCTTTAAAACAG | + |
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Preference number: 3 (lower is better) Translates to: LQLSSSQQHRRS*QSVTTEESLKQ Trigger: CTGTTTTAAAGATTCCTCAGTGGTGACTGACTGGCAAGACCTTCTGTGCTGTTGAGAGCTGGAAAGTTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CCA 72 bp | GCCATGTTTCATACATTCCTCTCCAGGTTTCCACACTaGTGCTACTTAAACAGCCCCTTGATGCTGTTCATG | + |
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Preference number: 3 (lower is better) Translates to: AMFHTFLSRFPH*CYLNSPLMLFM Trigger: CATGAACAGCATCAAGGGGCTGTTTAAGTAGCACCAGTGTGGAAACCTGGAGAGGAATGTATGAAACATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 72 bp | ATGTTTCATACATTCCTCTCCAGGTTTCCACACTGGTaGTACTTAAACAGCCCCTTGATGCTGTTCATGGCT | + |
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Preference number: 3 (lower is better) Translates to: MFHTFLSRFPHW*YLNSPLMLFMA Trigger: AGCCATGAACAGCATCAAGGGGCTGTTTAAGTAGCACCAGTGTGGAAACCTGGAGAGGAATGTATGAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CCA 72 bp | GGCTCTTCTTGGTTTACAGATTTTTCAGCTGATGTATaGGAAAGCTTGCAGGGCACTAAAACACTTGCCATG | + |
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Preference number: 3 (lower is better) Translates to: GSSWFTDFSADV*ESLQGTKTLAM Trigger: CATGGCAAGTGTTTTAGTGCCCTGCAAGCTTTCCCATACATCAGCTGAAAAATCTGTAAACCAAGAAGAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGATTTTTATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGACACTCACTCTAGTCTaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: KDFYGPKRLLDDIFSLWRTLTLV*CVCVCV Trigger: CACACACACACACACACACAAGACTAGAGTGAGTGT...CCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCATAAAAATCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTGCCCCCAATAACATGTTCAAACATGGTGGGAGCAGTTTCATAGAGTTTTATGGAGGGCTCTTCTaGGTTTACAGATTTTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: LVAPNNMFKHGGSSFIEFYGGLF*VYRFFS Trigger: GCTGAAAAATCTGTAAACCAAGAAGAGCCCTCCATA...AAACTCTATGAAACTGCTCCCACCATGTTTGAACATGTTATTGGGGGCAACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR TCA 72 bp | CTGAAACACAGAAACTGTCTGGTAGAAACTGATAGTTaGAAAGCCATCTACAGTAAGTGCCATAGGCTCATC | + |
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Preference number: 3 (lower is better) Translates to: LKHRNCLVETDS*KAIYSKCHRLI Trigger: GATGAGCCTATGGCACTTACTGTAGATGGCTTTTCAACTATCAGTTTCTACCAGACAGTTTCTGTGTTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR GCA 72 bp | GGTTTACAGATTTTTCAGCTGATGTATGGGAAAGCTTaGAGGGCACTAAAACACTTGCCATGTTTCATACAT | + |
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Preference number: 3 (lower is better) Translates to: GLQIFQLMYGKA*RALKHLPCFIH Trigger: ATGTATGAAACATGGCAAGTGTTTTAGTGCCCTGCAAGCTTTCCCATACATCAGCTGAAAAATCTGTAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CCA 90 bp | AGGCACAGCTCTGGCCTCAGACCTGCAACTTTCCAGCTCTCAACAGCACAGAAGTATCAAATAGTTCTGTaGGTTCCAGGGCAGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: RHSSGLRPATFQLSTAQKYQIVL*VPGQPC Trigger: GCACGGCTGCCCTGGAACCCACAGAACTATTTGATA...CTTCTGTGCTGTTGAGAGCTGGAAAGTTGCAGGTCTGAGGCCAGAGCTGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR GCA 90 bp | AAGTGTTCATACACTGACTTGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCGGCCTCAGCTGCAGGTaGGAGCCATCCTTCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: KCSYTDLCLNQQVTGLSFGLSCR*EPSFRA Trigger: CGCCCTGAAGGATGGCTCGCACCTGCAGCTGAGGCC...GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CCA 90 bp | ATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACCTGGCTACCCGCTGCTaGCACTGGCAGGTACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: MGLRGYLMTFLAFGGSGNLATRC*HWQVPA Trigger: TGCAGGTACCTGCCAGTGCCAGCAGCGGGTAGCCAG...GTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR TCA 90 bp | AAGTGTTCATACACTGACTTGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCCCACTCAGGTGGCGCTaGGCCTTCTTCTCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KCSYTDLCLNQQVTGLSFPLRWR*AFFSWL Trigger: CAGCCAGGAGAAGAAGGCTCAGCGCCACCTGAGTGG...GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CCA 90 bp | TATAATTTCCCAGCATGCCTTTACACTCACTCTAGTCTTGTGTGTGTGTGTGTGGTGGGTCTGGGGGCCTaGCAGTCTCCAGGGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: YNFPACLYTHSSLVCVCVVGLGA*QSPGTF Trigger: GAAAGTCCCTGGAGACTGCCAGGCCCCCAGACCCAC...CACACACACACACACAAGACTAGAGTGAGTGTAAAGGCATGCTGGGAAATTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CCA 90 bp | ATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACAATCCAGAGTGGGTCTaGGGGCCTGGCAGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MGLRGYLMTFLAFGGSGNNPEWV*GPGSLQ Trigger: CTGGAGACTGCCAGGCCCCCAGACCCACTCTGGATT...GTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR TCA 90 bp | ATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACTGTCCCCTGATGTCCTaGGTGCTTCTTGCCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: MGLRGYLMTFLAFGGSGNCPLMS*VLLASG Trigger: GCCTGAGGCAAGAAGCACTCAGGACATCAGGGGACA...GTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR GCA 90 bp | GCACTAAAACACTTGCCATGTTTCATACATTCCTCTCCAGGTTTCCACACTGGTCACATCCCACACATCTaGTCCATCTGTCCCGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ALKHLPCFIHSSPGFHTGHIPHI*SICPGG Trigger: CCCTCCGGGACAGATGGAGCAGATGTGTGGGATGTG...ACCAGTGTGGAAACCTGGAGAGGAATGTATGAAACATGGCAAGTGTTTTAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CCA 90 bp | GCACTAAAACACTTGCCATGTTTCATACATTCCTCTCCAGGTTTCCACACTGGTGGCCACTCCCGGAAGTaGTCAAAGTGGGTTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALKHLPCFIHSSPGFHTGGHSRK*SKWVGS Trigger: GGAACCAACCCACTTTGACCACTTCCGGGAGTGGCC...ACCAGTGTGGAAACCTGGAGAGGAATGTATGAAACATGGCAAGTGTTTTAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTTCATACACTGACTTGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCTGTTGGTGTTGCGCATaGCCCAGCCACTCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KCSYTDLCLNQQVTGLSFCWCCA*PSHSGG Trigger: GCCACCTGAGTGGCTGGGCCATGCGCAACACCAACA...GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR TCA 90 bp | AAGTGTTCATACACTGACTTGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCGTCTCCAGAAGTTGGTaGCAGGGTATCCGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KCSYTDLCLNQQVTGLSFVSRSW*QGIRCA Trigger: GGCACAGCGGATACCCTGTCACCAACTTCTGGAGAC...GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR GCA 90 bp | GCTAAGTTCCAGCAGCTGTCATTCCTAACTTATAATTTCCCAGCATGCCTTTACAACGAAGGGGAGGGCTaGCCTGGAATAGGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKFQQLSFLTYNFPACLYNEGEG*PGIGKL Trigger: CAGCTTCCCTATTCCAGGGCAGCCCTCCCCTTCGTT...GTAAAGGCATGCTGGGAAATTATAAGTTAGGAATGACAGCTGCTGGAACTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CCA 90 bp | CTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACTTGGGGTTGGTTTGTACCTTGTCACAGATGGCTaGCCTCAGCTGCAGGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LDDIFSLWRKWKLGVGLYLVTDG*PQLQVR Trigger: TCGCACCTGCAGCTGAGGCCAGCCATCTGTGACAAG...GTACAAACCAACCCCAAGTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CCA 90 bp | CTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACTTGGGGTTGGTTTGTACAGGGGAGGGCTGCCCTaGAATAGGGAAGCTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LDDIFSLWRKWKLGVGLYRGGLP*NREAGI Trigger: GATACCAGCTTCCCTATTCCAGGGCAGCCCTCCCCT...GTACAAACCAACCCCAAGTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR TCA 90 bp | TATAATTTCCCAGCATGCCTTTACACTCACTCTAGTCTTGTGTGTGTGTGTGTGAACCAGCTCCAAAGGTaGGTGACAGTTGGGGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YNFPACLYTHSSLVCVCVNQLQR*VTVGAS Trigger: GCTTGCCCCAACTGTCACTCACCTTTGGAGCTGGTT...CACACACACACACACAAGACTAGAGTGAGTGTAAAGGCATGCTGGGAAATTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACAAGCCACTGTGGTGGTaGTTACTGTCTGCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MGLRGYLMTFLAFGGSGNKPLWW*LLSAEP Trigger: AGGCTCTGCAGACAGTAATCACCACCACAGTGGCTT...GTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR GCA 90 bp | AAAGATTTTTATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGACAGGGTATCCGCTGTaGCCTCGGCAAGGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KDFYGPKRLLDDIFSLWRTGYPL*PRQGTS Trigger: GCTGGTTCCTTGCCGAGGGCACAGCGGATACCCTGT...CCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCATAAAAATCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR GCA 90 bp | AAATGCTGTGCTAAGTTCCAGCAGCTGTCATTCCTAACTTATAATTTCCCAGCAGCACTGGCAGGTACCTaGAGGGCAGCTCTAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KCCAKFQQLSFLTYNFPAALAGT*RAALGC Trigger: ACAACCTAGAGCTGCCCTGCAGGTACCTGCCAGTGC...TGCTGGGAAATTATAAGTTAGGAATGACAGCTGCTGGAACTTAGCACAGCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCCCAGCATGCCTTTACACTCACTCTAGTCTTGTGTGTGTGTGTGTGTGTGTGGATAGATGGGCATTaGGAGGTTTTCCGAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: ISQHAFTLTLVLCVCVCVWIDGH*EVFRGI Trigger: TATGCCTCGGAAAACCTCCCAATGCCCATCTATCCA...CACACACACACACACACACAAGACTAGAGTGAGTGTAAAGGCATGCTGGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CCA 90 bp | TGTCATAGCACCCAAGTTATGGAGGGCTCTTCTTGGTTTACAGATTTTTCAGCTTTCCTGAGGCATCTGTaGGTCATTGATGTCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: CHSTQVMEGSSWFTDFSAFLRHL*VIDVPR Trigger: ACGTGGGACATCAATGACCCACAGATGCCTCAGGAA...AGCTGAAAAATCTGTAAACCAAGAAGAGCCCTCCATAACTTGGGTGCTATGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTTCATACACTGACTTGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCAGGATGTGGCCATTGTaGTTGTTGGTGTTGCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KCSYTDLCLNQQVTGLSFRMWPL*LLVLRM Trigger: CATGCGCAACACCAACAACCACAATGGCCACATCCT...GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CCA 90 bp | GCACTAAAACACTTGCCATGTTTCATACATTCCTCTCCAGGTTTCCACACTGGTATACAGGGTGGAATATaGACTCGAACCTGTAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALKHLPCFIHSSPGFHTGIQGGI*TRTCNP Trigger: GGGGTTACAGGTTCGAGTCCATATTCCACCCTGTAT...ACCAGTGTGGAAACCTGGAGAGGAATGTATGAAACATGGCAAGTGTTTTAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CCA 90 bp | ATATATAGTAAGGCAGAAAAAGATTTTTATGGGCCTAAGAGGCTACTTGATGACACTGTCTGCAGAGCCTaGCTACCCGCTGCTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: IYSKAEKDFYGPKRLLDDTVCRA*LPAAGT Trigger: AGTGCCAGCAGCGGGTAGCCAGGCTCTGCAGACAGT...GTCATCAAGTAGCCTCTTAGGCCCATAAAAATCTTTTTCTGCCTTACTATATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTGTGAATCACATAAATGCACCCTaGGCGTGCGTTTTCTTGCATGTACTTCCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVNHINAP*ACVFLHVLPCH Trigger: GTGACAAGGAAGTACATGCAAGAAAACGCACGCCAAGGGTGCATTTATGTGATTCACACACACACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR TCA 90 bp | AAATGCTGTGCTAAGTTCCAGCAGCTGTCATTCCTAACTTATAATTTCCCAGCAAAGCCATCTGTCTCTTaGGGGCACTTCTTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCCAKFQQLSFLTYNFPAKPSVS*GHFFCL Trigger: AAGGCAGAAGAAGTGCCCTCAAGAGACAGATGGCTT...TGCTGGGAAATTATAAGTTAGGAATGACAGCTGCTGGAACTTAGCACAGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR TCA 90 bp | AAATGCTGTGCTAAGTTCCAGCAGCTGTCATTCCTAACTTATAATTTCCCAGCAGAGGGATCTGCTTCTTaGGGAAAATCCAGAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KCCAKFQQLSFLTYNFPAEGSAS*GKSRVG Trigger: ACCCACTCTGGATTTTCCTCAAGAAGCAGATCCCTC...TGCTGGGAAATTATAAGTTAGGAATGACAGCTGCTGGAACTTAGCACAGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR GCA 90 bp | TATAATTTCCCAGCATGCCTTTACACTCACTCTAGTCTTGTGTGTGTGTGTGTGCAAGCTTTCTTTTGTTaGTTCAGCCGGGCCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YNFPACLYTHSSLVCVCVQAFFC*FSRALS Trigger: TGACAAGGCCCGGCTGAAGCAACAAAAGAAAGCTTG...CACACACACACACACAAGACTAGAGTGAGTGTAAAGGCATGCTGGGAAATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR GCA 90 bp | AAAGATTTTTATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGAGGCTGCTAACCTCCTaGATGCTGTCACCGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDFYGPKRLLDDIFSLWRRLLTS*MLSPCF Trigger: GAAACACGGTGACAGCATGCAGGAGGTTAGCAGCCT...CCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCATAAAAATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CCA 90 bp | ATATATAGTAAGGCAGAAAAAGATTTTTATGGGCCTAAGAGGCTACTTGATGACGAGGAAAATCCAGAGTaGGTCTGGGGGCCTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IYSKAEKDFYGPKRLLDDEENPE*VWGPGS Trigger: ACTGCCAGGCCCCCAGACCCACTCTGGATTTTCCTC...GTCATCAAGTAGCCTCTTAGGCCCATAAAAATCTTTTTCTGCCTTACTATATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| 3UTR CAA 72 bp | ACATTAGGTGATCACGGAATAGTCACATGGATTTGGTaGCCCCCAATAACATGTTCAAACATGGTGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGDHGIVTWIW*PPITCSNMVGA Trigger: TGCTCCCACCATGTTTGAACATGTTATTGGGGGCAACCAAATCCATGTGACTATTCCGTGATCACCTAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR TCA 90 bp | CTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACTTGGGGTTGGTTTGTACAGTATTATATCTCCTTaGAAGGTGGGCAGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LDDIFSLWRKWKLGVGLYSIISP*KVGRSQ Trigger: CTGTGACCTGCCCACCTTTCAAGGAGATATAATACT...GTACAAACCAACCCCAAGTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CCA 90 bp | TGTCATAGCACCCAAGTTATGGAGGGCTCTTCTTGGTTTACAGATTTTTCAGCTACTTACTCTCTGGTCTaGGGTGATCATGAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CHSTQVMEGSSWFTDFSATYSLV*GDHELL Trigger: AAGGAGTTCATGATCACCCCAGACCAGAGAGTAAGT...AGCTGAAAAATCTGTAAACCAAGAAGAGCCCTCCATAACTTGGGTGCTATGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CAA 72 bp | ATAATTTCCCAGCATGCCTTTACACTCACTCTAGTCTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: IISQHAFTLTLV*CVCVCVCVCES Trigger: TGATTCACACACACACACACACACACACACACACAAGACTAGAGTGAGTGTAAAGGCATGCTGGGAAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CAA 72 bp | TTTAGCCTTTGGAGGAAGTGGAAACTTGGGGTTGGTTaGTACCCCAAAGGGATTCACTTAATAGGTGATACA | + |
|
Preference number: 4 (lower is better) Translates to: FSLWRKWKLGVG*YPKGIHLIGDT Trigger: TGTATCACCTATTAAGTGAATCCCTTTGGGGTACAAACCAACCCCAAGTTTCCACTTCCTCCAAAGGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR TCA 90 bp | TATAATTTCCCAGCATGCCTTTACACTCACTCTAGTCTTGTGTGTGTGTGTGTGAGCTGCCATAGGAACTaGCATTATACTGTAGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YNFPACLYTHSSLVCVCVSCHRN*HYTVVS Trigger: ACTCACTACAGTATAATGTCAGTTCCTATGGCAGCT...CACACACACACACACAAGACTAGAGTGAGTGTAAAGGCATGCTGGGAAATTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CCA 90 bp | AAGTGTTCATACACTGACTTGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCAAGGTGAGTGACAGTTaGGGCAAGCTTTCTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KCSYTDLCLNQQVTGLSFKVSDS*GKLSFV Trigger: AACAAAAGAAAGCTTGCCCCAACTGTCACTCACCTT...GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR GCA 90 bp | TTGGTTGCCCCCAATAACATGTTCAAACATGGTGGGAGCAGTTTCATAGAGTTTGCCCGGGGAAATAAATaGTTGGATTTGGATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVAPNNMFKHGGSSFIEFARGNK*LDLDIS Trigger: AGAAATATCCAAATCCAAGCATTTATTTCCCCGGGC...AAACTCTATGAAACTGCTCCCACCATGTTTGAACATGTTATTGGGGGCAACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CAA 72 bp | TGGTTTACAGATTTTTCAGCTGATGTATGGGAAAGCTaGCAGGGCACTAAAACACTTGCCATGTTTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: WFTDFSADVWES*QGTKTLAMFHT Trigger: TGTATGAAACATGGCAAGTGTTTTAGTGCCCTGCAAGCTTTCCCATACATCAGCTGAAAAATCTGTAAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| 3UTR CAA 72 bp | AAATTGGTGACAGTTTTAAAGTGTTCATACACTGACTaGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLVTVLKCSYTD*CLNQQVTGLSF Trigger: GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTTTAAAACTGTCACCAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CCA 90 bp | AAATGCTGTGCTAAGTTCCAGCAGCTGTCATTCCTAACTTATAATTTCCCAGCAATAAATGCTTGGATTTaGATATTTCTGAAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCCAKFQQLSFLTYNFPAINAWI*IFLKGQ Trigger: CTGCCCTTTCAGAAATATCCAAATCCAAGCATTTAT...TGCTGGGAAATTATAAGTTAGGAATGACAGCTGCTGGAACTTAGCACAGCATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS GCA 90 bp | TTTTGTTGCTTCAGCCGGGCCTTGTCACAGATGGCTGGCCTCAGCTaGAGGTGCGAGCCATCCTTCAGGGCGCAAGCGCGTGCACACACC | + |
|
Preference number: 5 (lower is better) Translates to: FCCFSRALSQMAGLS*RCEPSFRAQARAHT Trigger: GGTGTGTGCACGCGCTTGCGCCCTGAAGGATGGCTCGCACCTGCAGCTGAGGCCAGCCATCTGTGACAAGGCCCGGCTGAAGCAACAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021791.8 ENSMUST00000225271.2 |
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| CDS TCA 90 bp | GTTTCAGAGCAGGGTGCTGGTAGGCCTGGTAAGCCACTGTGGTGGTaGTTACTGTCTGCAGAGCCTGGCTACCCGCTGCTGGCACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSEQGAGRPGKPLWW*LLSAEPGYPLLALA Trigger: TGCCAGTGCCAGCAGCGGGTAGCCAGGCTCTGCAGACAGTAATCACCACCACAGTGGCTTACCAGGCCTACCAGCACCCTGCTCTGAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS TCA 90 bp | AGCCACTCAGGTGGCGCTGAGCCTTCTTCTCCTGGCTGCTGTAGATaGAGCGCACGTAGCCATCAGGCCACTCCCGGAAGTGGTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SHSGGAEPSSPGCCR*SARSHQATPGSGQS Trigger: ACTTTGACCACTTCCGGGAGTGGCCTGATGGCTACGTGCGCTTCATCTACAGCAGCCAGGAGAAGAAGGCTCAGCGCCACCTGAGTGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021791.8 ENSMUST00000225271.2 |
||
| CDS TCA 90 bp | GACAGGGTATCCGCTGTGCCCTCGGCAAGGAACCAGCTCCAAAGGTaGGTGACAGTTGGGGCAAGCTTTCTTTTGTTGCTTCAGCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DRVSAVPSARNQLQR*VTVGASFLLLLQPG Trigger: GCCCGGCTGAAGCAACAAAAGAAAGCTTGCCCCAACTGTCACTCACCTTTGGAGCTGGTTCCTTGCCGAGGGCACAGCGGATACCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021791.8 ENSMUST00000225271.2 |
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| CDS GCA 90 bp | CAGACACACATCCCACACATCTGCTCCATCTGTCCCGGAGGGATCTaGTTCTTGAGGAAAATCCAGAGTGGGTCTGGGGGCCTGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QTHIPHICSICPGGI*FLRKIQSGSGGLAV Trigger: GACTGCCAGGCCCCCAGACCCACTCTGGATTTTCCTCAAGAAGCAGATCCCTCCGGGACAGATGGAGCAGATGTGTGGGATGTGTGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CCA 90 bp | CCACTCCCGGAAGTGGTCAAAGTGGGTTGGTTCCTGAGGCATCTGTaGGTCATTGATGTCCCACGTGAGTTTCATCCCGTAGGAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLPEVVKVGWFLRHL*VIDVPREFHPVGEH Trigger: GTGCTCTCCTACGGGATGAAACTCACGTGGGACATCAATGACCCACAGATGCCTCAGGAACCAACCCACTTTGACCACTTCCGGGAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021791.8 ENSMUST00000225271.2 |
||
| CDS-3UTR CAA 90 bp | AGGCACAGCTCTGGCCTCAGACCTGCAACTTTCCAGCTCTCAACAGCACAGAAGAGTGGTCAAAGTGGGTaGGTTCCTGAGGCATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RHSSGLRPATFQLSTAQKSGQSG*VPEASV Trigger: CACAGATGCCTCAGGAACCAACCCACTTTGACCACT...CTTCTGTGCTGTTGAGAGCTGGAAAGTTGCAGGTCTGAGGCCAGAGCTGTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS CCA 90 bp | TTGAAAGGTGGGCAGGTCACAGGTAACTCTGTAGACATCAGAGTTTaGGAACGAAGGGGAGGGCTGCCCTGGAATAGGGAAGCTGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: LKGGQVTGNSVDIRV*ERRGGLPWNREAGI Trigger: GATACCAGCTTCCCTATTCCAGGGCAGCCCTCCCCTTCGTTCCCAAACTCTGATGTCTACAGAGTTACCTGTGACCTGCCCACCTTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CAA 90 bp | TGTCATAGCACCCAAGTTATGGAGGGCTCTTCTTGGTTTACAGATTTTTCAGCTTGCTTCAGCCGGGCCTaGTCACAGATGGCTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CHSTQVMEGSSWFTDFSACFSRA*SQMAGL Trigger: GAGGCCAGCCATCTGTGACAAGGCCCGGCTGAAGCA...AGCTGAAAAATCTGTAAACCAAGAAGAGCCCTCCATAACTTGGGTGCTATGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACTGTCCTGAGTGCTTCTaGCCTCAGGCTCCCCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: MGLRGYLMTFLAFGGSGNCPECF*PQAPLI Trigger: GATCAGGGGAGCCTGAGGCAAGAAGCACTCAGGACA...GTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACGGGGCAAGCTTTCTTTaGTTGCTTCAGCCGGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MGLRGYLMTFLAFGGSGNGASFL*LLQPGL Trigger: AAGGCCCGGCTGAAGCAACAAAAGAAAGCTTGCCCC...GTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CAA 90 bp | AAAGATTTTTATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGAGGGCAGCCGTGCTATaGAGGTGTCCCCTGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KDFYGPKRLLDDIFSLWRRAAVL*RCPLMS Trigger: GGACATCAGGGGACACCTCAATAGCACGGCTGCCCT...CCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCATAAAAATCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CAA 90 bp | CTTGATGACATTTTTAGCCTTTGGAGGAAGTGGAAACTTGGGGTTGGTTTGTACTCAAGTCTCCAGAAGTaGGTGACAGGGTATCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LDDIFSLWRKWKLGVGLYSSLQK*VTGYPL Trigger: CAGCGGATACCCTGTCACCAACTTCTGGAGACTTGA...GTACAAACCAACCCCAAGTTTCCACTTCCTCCAAAGGCTAAAAATGTCATCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CAA 90 bp | TATAATTTCCCAGCATGCCTTTACACTCACTCTAGTCTTGTGTGTGTGTGTGTGGAAGCCATCTGTCTCTaGAGGGCACTTCTTCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YNFPACLYTHSSLVCVCVEAICL*RALLLP Trigger: AGGCAGAAGAAGTGCCCTCAAGAGACAGATGGCTTC...CACACACACACACACAAGACTAGAGTGAGTGTAAAGGCATGCTGGGAAATTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
||
| CDS-3UTR CAA 90 bp | AAAGATTTTTATGGGCCTAAGAGGCTACTTGATGACATTTTTAGCCTTTGGAGGGGGCACAGCCTGGCATaGCTCACAGTCAACCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: KDFYGPKRLLDDIFSLWRGHSLA*LTVNLL Trigger: GAGAAGGTTGACTGTGAGCAATGCCAGGCTGTGCCC...CCTCCAAAGGCTAAAAATGTCATCAAGTAGCCTCTTAGGCCCATAAAAATCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CAA 90 bp | AAGTGTTCATACACTGACTTGTGTCTTAACCAGCAAGTTACAGGTCTGAGCTTCGTGGATAGATGGGCATaGGGAGGTTTTCCGAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: KCSYTDLCLNQQVTGLSFVDRWA*GGFPRH Trigger: ATGCCTCGGAAAACCTCCCAATGCCCATCTATCCAC...GAAGCTCAGACCTGTAACTTGCTGGTTAAGACACAAGTCAGTGTATGAACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CCA 90 bp | CAACTCATAGCCCCAAGGTGGCCCGGGGAAATAAATGCTTGGATTTaGATATTTCTGAAAGGGCAGTATTATATCTCCTTGAAAGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: QLIAPRWPGEINAWI*IFLKGQYYISLKGG Trigger: CCCACCTTTCAAGGAGATATAATACTGCCCTTTCAGAAATATCCAAATCCAAGCATTTATTTCCCCGGGCCACCTTGGGGCTATGAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CAA 90 bp | CATCTGTGGAAATGCCAGGTAGGCAGGTTATATATAGTAAGGCAGAAAAAGATTTGGGCTTCCCGTGTGTaGGTTTCCAGCTATGATACC | + |
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Preference number: 5 (lower is better) Translates to: HLWKCQVGRLYIVRQKKIWASRV*VSSYDT Trigger: GGTATCATAGCTGGAAACCAACACACGGGAAGCCCA...AATCTTTTTCTGCCTTACTATATATAACCTGCCTACCTGGCATTTCCACAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CCA 90 bp | ACTTGCCAACTCATAGCCCCAAGGTGGCCCGGGGAAATAAATGCTTaGATTTGGATATTTCTGAAAGGGCAGTATTATATCTCCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: TCQLIAPRWPGEINA*IWIFLKGQYYISLK Trigger: TTTCAAGGAGATATAATACTGCCCTTTCAGAAATATCCAAATCCAAGCATTTATTTCCCCGGGCCACCTTGGGGCTATGAGTTGGCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS-3UTR CAA 90 bp | ATATATAGTAAGGCAGAAAAAGATTTTTATGGGCCTAAGAGGCTACTTGATGACCGGGGAAATAAATGCTaGGATTTGGATATTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: IYSKAEKDFYGPKRLLDDRGNKC*DLDISE Trigger: TTCAGAAATATCCAAATCCAAGCATTTATTTCCCCG...GTCATCAAGTAGCCTCTTAGGCCCATAAAAATCTTTTTCTGCCTTACTATATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS TCA 72 bp | GGTGGCGCTGAGCCTTCTTCTCCTGGCTGCTGTAGATaGAGCGCACGTAGCCATCAGGCCACTCCCGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GGAEPSSPGCCR*SARSHQATPGS Trigger: ACTTCCGGGAGTGGCCTGATGGCTACGTGCGCTTCATCTACAGCAGCCAGGAGAAGAAGGCTCAGCGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021791.8 ENSMUST00000225271.2 |
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| CDS TCA 72 bp | CAGGGTGCTGGTAGGCCTGGTAAGCCACTGTGGTGGTaGTTACTGTCTGCAGAGCCTGGCTACCCGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QGAGRPGKPLWW*LLSAEPGYPLL Trigger: CAGCAGCGGGTAGCCAGGCTCTGCAGACAGTAATCACCACCACAGTGGCTTACCAGGCCTACCAGCACCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS GCA 72 bp | GAGCCTGGCTACCCGCTGCTGGCACTGGCAGGTACCTaGAGGGCAGCTCTAGGTTGTAATAAGGCAATGTGG | + |
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Preference number: 6 (lower is better) Translates to: EPGYPLLALAGT*RAALGCNKAMW Trigger: CCACATTGCCTTATTACAACCTAGAGCTGCCCTGCAGGTACCTGCCAGTGCCAGCAGCGGGTAGCCAGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS TCA 72 bp | AGGGCAGCCGTGCTATTGAGGTGTCCCCTGATGTCCTaGGTGCTTCTTGCCTCAGGCTCCCCTGATCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RAAVLLRCPLMS*VLLASGSPDLL Trigger: AAGGAGATCAGGGGAGCCTGAGGCAAGAAGCACTCAGGACATCAGGGGACACCTCAATAGCACGGCTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS TCA 72 bp | CTGGCAGTCTCCAGGGACTTTCAGAGGGGCTCTCCCTaGAGGAGAGACTGCCTGAATGACTCCCTCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LAVSRDFQRGSP*RRDCLNDSLLR Trigger: CCTCAAGAGGGAGTCATTCAGGCAGTCTCTCCTTCAGGGAGAGCCCCTCTGAAAGTCCCTGGAGACTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CCA 72 bp | AGGGATCTGCTTCTTGAGGAAAATCCAGAGTGGGTCTaGGGGCCTGGCAGTCTCCAGGGACTTTCAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RDLLLEENPEWV*GPGSLQGLSEG Trigger: CCCCTCTGAAAGTCCCTGGAGACTGCCAGGCCCCCAGACCCACTCTGGATTTTCCTCAAGAAGCAGATCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CCA 72 bp | TCCCGGAGGGATCTGCTTCTTGAGGAAAATCCAGAGTaGGTCTGGGGGCCTGGCAGTCTCCAGGGACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SRRDLLLEENPE*VWGPGSLQGLS Trigger: TGAAAGTCCCTGGAGACTGCCAGGCCCCCAGACCCACTCTGGATTTTCCTCAAGAAGCAGATCCCTCCGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS TCA 72 bp | TCAGAGGGGCTCTCCCTGAAGGAGAGACTGCCTGAATaGCTCCCTCTTGAGGGTCTAAGGCTGGTGGATAGA | + |
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Preference number: 6 (lower is better) Translates to: SEGLSLKERLPE*LPLEGLRLVDR Trigger: TCTATCCACCAGCCTTAGACCCTCAAGAGGGAGTCATTCAGGCAGTCTCTCCTTCAGGGAGAGCCCCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CCA 72 bp | GGGCAGGTCACAGGTAACTCTGTAGACATCAGAGTTTaGGAACGAAGGGGAGGGCTGCCCTGGAATAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: GQVTGNSVDIRV*ERRGGLPWNRE Trigger: TTCCCTATTCCAGGGCAGCCCTCCCCTTCGTTCCCAAACTCTGATGTCTACAGAGTTACCTGTGACCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CAA 72 bp | CCTCTTGAGGGTCTAAGGCTGGTGGATAGATGGGCATaGGGAGGTTTTCCGAGGCATAGGTGCAGCTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: PLEGLRLVDRWA*GGFPRHRCSWQ Trigger: TTGCCAGCTGCACCTATGCCTCGGAAAACCTCCCAATGCCCATCTATCCACCAGCCTTAGACCCTCAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS TCA 72 bp | CTGTGCCCTCGGCAAGGAACCAGCTCCAAAGGTGAGTaGCAGTTGGGGCAAGCTTTCTTTTGTTGCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LCPRQGTSSKGE*QLGQAFFCCFS Trigger: GCTGAAGCAACAAAAGAAAGCTTGCCCCAACTGTCACTCACCTTTGGAGCTGGTTCCTTGCCGAGGGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021791.8 ENSMUST00000225271.2 |
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| CDS TCA 72 bp | TCCGCTGTGCCCTCGGCAAGGAACCAGCTCCAAAGGTaGGTGACAGTTGGGGCAAGCTTTCTTTTGTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SAVPSARNQLQR*VTVGASFLLLL Trigger: AAGCAACAAAAGAAAGCTTGCCCCAACTGTCACTCACCTTTGGAGCTGGTTCCTTGCCGAGGGCACAGCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021791.8 ENSMUST00000225271.2 |
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| CDS CCA 72 bp | CCTGGCATTGCTCACAGTCAACCTTCTCCTCAAGGCTaGGCTTCCCGTGTGTTGGTTTCCAGCTATGATACC | + |
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Preference number: 6 (lower is better) Translates to: PGIAHSQPSPQG*ASRVLVSSYDT Trigger: GGTATCATAGCTGGAAACCAACACACGGGAAGCCCAGCCTTGAGGAGAAGGTTGACTGTGAGCAATGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CCA 72 bp | ACCTGCAGGGCAGCTCTAGGTTGTAATAAGGCAATGTaGGCACAGCCTGGCATTGCTCACAGTCAACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TCRAALGCNKAM*AQPGIAHSQPS Trigger: AGAAGGTTGACTGTGAGCAATGCCAGGCTGTGCCCACATTGCCTTATTACAACCTAGAGCTGCCCTGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CCA 72 bp | GAAGTGGTCAAAGTGGGTTGGTTCCTGAGGCATCTGTaGGTCATTGATGTCCCACGTGAGTTTCATCCCGTA | + |
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Preference number: 6 (lower is better) Translates to: EVVKVGWFLRHL*VIDVPREFHPV Trigger: TACGGGATGAAACTCACGTGGGACATCAATGACCCACAGATGCCTCAGGAACCAACCCACTTTGACCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021791.8 ENSMUST00000225271.2 |
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| CDS CCA 72 bp | GACATCAGAGTTTGGGAACGAAGGGGAGGGCTGCCCTaGAATAGGGAAGCTGGTATCAGCAGTCATATCAAA | + |
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Preference number: 6 (lower is better) Translates to: DIRVWERRGGLP*NREAGISSHIK Trigger: TTTGATATGACTGCTGATACCAGCTTCCCTATTCCAGGGCAGCCCTCCCCTTCGTTCCCAAACTCTGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CAA 90 bp | CCAACTCATAGCCCCAAGGTGGCCCGGGGAAATAAATGCTTGGATTaGGATATTTCTGAAAGGGCAGTATTATATCTCCTTGAAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PTHSPKVARGNKCLD*DISERAVLYLLERW Trigger: CCACCTTTCAAGGAGATATAATACTGCCCTTTCAGAAATATCCAAATCCAAGCATTTATTTCCCCGGGCCACCTTGGGGCTATGAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS GCA 72 bp | CCAACTCATAGCCCCAAGGTGGCCCGGGGAAATAAATaGTTGGATTTGGATATTTCTGAAAGGGCAGTATTA | + |
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Preference number: 6 (lower is better) Translates to: PTHSPKVARGNK*LDLDISERAVL Trigger: TAATACTGCCCTTTCAGAAATATCCAAATCCAAGCATTTATTTCCCCGGGCCACCTTGGGGCTATGAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CCA 72 bp | CTCATAGCCCCAAGGTGGCCCGGGGAAATAAATGCTTaGATTTGGATATTTCTGAAAGGGCAGTATTATATC | + |
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Preference number: 6 (lower is better) Translates to: LIAPRWPGEINA*IWIFLKGQYYI Trigger: GATATAATACTGCCCTTTCAGAAATATCCAAATCCAAGCATTTATTTCCCCGGGCCACCTTGGGGCTATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CAA 72 bp | AGCCCCAAGGTGGCCCGGGGAAATAAATGCTTGGATTaGGATATTTCTGAAAGGGCAGTATTATATCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SPKVARGNKCLD*DISERAVLYLL Trigger: AAGGAGATATAATACTGCCCTTTCAGAAATATCCAAATCCAAGCATTTATTTCCCCGGGCCACCTTGGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CAA 72 bp | ACTCATAGCCCCAAGGTGGCCCGGGGAAATAAATGCTaGGATTTGGATATTTCTGAAAGGGCAGTATTATAT | + |
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Preference number: 6 (lower is better) Translates to: THSPKVARGNKC*DLDISERAVLY Trigger: ATATAATACTGCCCTTTCAGAAATATCCAAATCCAAGCATTTATTTCCCCGGGCCACCTTGGGGCTATGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CAA 72 bp | ATTTGGATATTTCTGAAAGGGCAGTATTATATCTCCTaGAAAGGTGGGCAGGTCACAGGTAACTCTGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: IWIFLKGQYYIS*KGGQVTGNSVD Trigger: GTCTACAGAGTTACCTGTGACCTGCCCACCTTTCAAGGAGATATAATACTGCCCTTTCAGAAATATCCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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| CDS CAA 90 bp | AATGCTTGGATTTGGATATTTCTGAAAGGGCAGTATTATATCTCCTaGAAAGGTGGGCAGGTCACAGGTAACTCTGTAGACATCAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: NAWIWIFLKGQYYIS*KGGQVTGNSVDIRV Trigger: AACTCTGATGTCTACAGAGTTACCTGTGACCTGCCCACCTTTCAAGGAGATATAATACTGCCCTTTCAGAAATATCCAAATCCAAGCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021791.8 |
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