Pregenerated sensors for GCM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023333Ensembl transcript IDs: ENSMUST00000024104.9
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTATTCCTTATGGAGGGTAAACACACTGGCATTGTCAACAGCTTaGGTGAGAAGACCTTGTCTACTGCTTGTCACAATTGATTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: FYSLWRVNTLALSTA*VRRPCLLLVTIDSN Trigger: GTTGGAATCAATTGTGACAAGCAGTAGACAAGGTCTTCTCACTCAAGCTGTTGACAATGCCAGTGTGTTTACCCTCCATAAGGAATAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| 3UTR-3UTR CCA 90 bp | GTAAACTCGGCTGGCCTTGAACTCACAAATATCCAACTGCCTCTGTCTCCTGAGTTAACAAATCACGACTaGGAGAGAGAAGGGGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: VNSAGLELTNIQLPLSPELTNHD*EREGEL Trigger: AAGCTCCCCTTCTCTCTCCCAGTCGTGATTTGTTAA...CTCAGGAGACAGAGGCAGTTGGATATTTGTGAGTTCAAGGCCAGCCGAGTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTCTACATAGTCCTGGCTCTCCTGGAACTCAGTATGTAAACTCGGCTGGCGAAGACCTTGTCTACTaGTTGTCACAATTGATTCCA | + |
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Preference number: 2 (lower is better) Translates to: VSLHSPGSPGTQYVNSAGEDLVY*LSQLIP Trigger: TGGAATCAATTGTGACAAGCAGTAGACAAGGTCTTC...GCCAGCCGAGTTTACATACTGAGTTCCAGGAGAGCCAGGACTATGTAGAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| 3UTR GCA 72 bp | CTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATaGTTTGAAACCCGTCTTCTAAGAAAATTCTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LVTIDSNIPLRL*FETRLLRKFCQ Trigger: TTGGCAGAATTTTCTTAGAAGACGGGTTTCAAAGCATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | GTAAACTCGGCTGGCCTTGAACTCACAAATATCCAACTGCCTCTGTCTCCTGAGGCCCAGCTGCTCAGGTaGCGCTGTGCGTTCCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: VNSAGLELTNIQLPLSPEAQLLR*RCAFLS Trigger: CGACAGGAACGCACAGCGCCACCTGAGCAGCTGGGC...CTCAGGAGACAGAGGCAGTTGGATATTTGTGAGTTCAAGGCCAGCCGAGTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR TCA 90 bp | GTAAACTCGGCTGGCCTTGAACTCACAAATATCCAACTGCCTCTGTCTCCTGAGCACTACCCCCAGGCATaGCTTCTTGAGGATCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: VNSAGLELTNIQLPLSPEHYPQA*LLEDPG Trigger: TCCCGGATCCTCAAGAAGTCATGCCTGGGGGTAGTG...CTCAGGAGACAGAGGCAGTTGGATATTTGTGAGTTCAAGGCCAGCCGAGTTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR TCA 90 bp | GTAAACTCGGCTGGCCTTGAACTCACAAATATCCAACTGCCTCTGTCTCCTGAGCCAGGCATGACTTCTTaGGGATCCGGGAGTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: VNSAGLELTNIQLPLSPEPGMTS*GSGSCG Trigger: ACCACAACTCCCGGATCCTCAAGAAGTCATGCCTGG...CTCAGGAGACAGAGGCAGTTGGATATTTGTGAGTTCAAGGCCAGCCGAGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR TCA 90 bp | GTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATGCTTTGAAAGCCTCCAGAAGTTGGTaGCCGGGAAGCCGCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VYCLSQLIPTFLSGYALKASRSW*PGSRRG Trigger: GCCACGGCGGCTTCCCGGTCACCAACTTCTGGAGGC...TTTCAAAGCATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR TCA 90 bp | GTAAACTCGGCTGGCCTTGAACTCACAAATATCCAACTGCCTCTGTCTCCTGAGTGGACTGGAAAAAGATaGAGCGTCCGTCGTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VNSAGLELTNIQLPLSPEWTGKR*SVRRAS Trigger: GGAGGCACGACGGACGCTTCATCTTTTTCCAGTCCA...CTCAGGAGACAGAGGCAGTTGGATATTTGTGAGTTCAAGGCCAGCCGAGTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR GCA 90 bp | GTCTCTCTACATAGTCCTGGCTCTCCTGGAACTCAGTATGTAAACTCGGCTGGCGTCTCAGGTAAATCTTaGGGCCTTCCTCTGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VSLHSPGSPGTQYVNSAGVSGKS*GLPLWS Trigger: GCTCCACAGAGGAAGGCCGCAAGATTTACCTGAGAC...GCCAGCCGAGTTTACATACTGAGTTCCAGGAGAGCCAGGACTATGTAGAGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR GCA 90 bp | GTCTCTCTACATAGTCCTGGCTCTCCTGGAACTCAGTATGTAAACTCGGCTGGCGGACAGCTTTTCCTCTaGTGCTTCTGTCTGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VSLHSPGSPGTQYVNSAGGQLFL*CFCLAL Trigger: CAAAGCCAGACAGAAGCAGCAGAGGAAAAGCTGTCC...GCCAGCCGAGTTTACATACTGAGTTCCAGGAGAGCCAGGACTATGTAGAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | CTATTCCTTATGGAGGGTAAACACACTGGCATTGTCAACAGCTTGAGTGAGAAGTGCGGCCTTCCTCTGTaGAGCAGTCCCTGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: LFLMEGKHTGIVNSLSEKCGLPL*SSPCCT Trigger: TGTGCAGCAGGGACTGCTCCACAGAGGAAGGCCGCA...CTTCTCACTCAAGCTGTTGACAATGCCAGTGTGTTTACCCTCCATAAGGAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | GTCTCTCTACATAGTCCTGGCTCTCCTGGAACTCAGTATGTAAACTCGGCTGGCTGCTCGCCTTTGGACTaGAAAAAGATGAAGCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: VSLHSPGSPGTQYVNSAGCSPLD*KKMKRP Trigger: CGGACGCTTCATCTTTTTCCAGTCCAAAGGCGAGCA...GCCAGCCGAGTTTACATACTGAGTTCCAGGAGAGCCAGGACTATGTAGAGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR TCA 90 bp | GTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATGCTTTGAAACCAGGGACAGGAGGCTaGAACTGCTCTTCACTGCCG | + |
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Preference number: 4 (lower is better) Translates to: VYCLSQLIPTFLSGYALKPGTGG*NCSSLP Trigger: CGGCAGTGAAGAGCAGTTTCAGCCTCCTGTCCCTGG...TTTCAAAGCATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | GACATTACACCTGGCACGGTGACTTTCTATTCCTTATGGAGGGTAAACACACTGAGGATCCGGGAGTTGTaGTTGTTGGTGTTGCGCATG | + |
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Preference number: 4 (lower is better) Translates to: DITPGTVTFYSLWRVNTLRIREL*LLVLRM Trigger: CATGCGCAACACCAACAACCACAACTCCCGGATCCT...CAGTGTGTTTACCCTCCATAAGGAATAGAAAGTCACCGTGCCAGGTGTAATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | GTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATGCTTTGAAACAAGGGATGACAGCCTaGTTGAGCTGCAGGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: VYCLSQLIPTFLSGYALKQGMTA*LSCRGF Trigger: GAACCCCCTGCAGCTCAACCAGGCTGTCATCCCTTG...TTTCAAAGCATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR GCA 90 bp | GTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATGCTTTGAAAATGAAGCGTCCGTCGTaGCTCCAGAAGTTGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VYCLSQLIPTFLSGYALKMKRPS*LQKLVT Trigger: GGTCACCAACTTCTGGAGGCACGACGGACGCTTCAT...TTTCAAAGCATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR GCA 90 bp | GAAGACCTTGTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATCAAAATCCCACCTGTTaGTCTTGCCGGGCAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: EDLVYCLSQLIPTFLSGYQNPTC*SCRAVH Trigger: ATGCACTGCCCGGCAAGAGCAACAGGTGGGATTTTG...ATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGACAAGGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | GACATTACACCTGGCACGGTGACTTTCTATTCCTTATGGAGGGTAAACACACTGTGGCTTTGTCACAGATaGCGGGTCTCAGGTAAATCT | + |
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Preference number: 4 (lower is better) Translates to: DITPGTVTFYSLWRVNTLWLCHR*RVSGKS Trigger: AGATTTACCTGAGACCCGCCATCTGTGACAAAGCCA...CAGTGTGTTTACCCTCCATAAGGAATAGAAAGTCACCGTGCCAGGTGTAATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR GCA 90 bp | GTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATGCTTTGAAAGCTTCAGGGGTCCATTaGAGTTGGGACAGCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VYCLSQLIPTFLSGYALKASGVH*SWDSFS Trigger: GGAAAAGCTGTCCCAACTGCAATGGACCCCTGAAGC...TTTCAAAGCATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | GAAGACCTTGTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATTCATCCGTAAGGAGTTaGAGGCAGATGCCATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EDLVYCLSQLIPTFLSGYSSVRS*RQMPCA Trigger: TGCACATGGCATCTGCCTCCAACTCCTTACGGATGA...ATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGACAAGGTCTTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR GCA 90 bp | GAAGACCTTGTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATCAGCTTTTCCTCTGCTaGTTCTGTCTGGCTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: EDLVYCLSQLIPTFLSGYQLFLC*FCLALS Trigger: TGACAAAGCCAGACAGAAGCAGCAGAGGAAAAGCTG...ATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGACAAGGTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | GACATTACACCTGGCACGGTGACTTTCTATTCCTTATGGAGGGTAAACACACTGCGTAGATCCTACTGCTaGAGAATTTGCATCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: DITPGTVTFYSLWRVNTLRRSYC*RICISH Trigger: ATGAGAGATGCAAATTCTCCAGCAGTAGGATCTACG...CAGTGTGTTTACCCTCCATAAGGAATAGAAAGTCACCGTGCCAGGTGTAATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR GCA 90 bp | TCTTCTAAGAAAATTCTGCCAAGCCCTTTAACAAATCACGACTGGGAGAGAGAAGAGGCAGATGCCATGTaGACTTTCTTCATGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SSKKILPSPLTNHDWEREEADAM*TFFMAL Trigger: AAGAGCCATGAAGAAAGTGCACATGGCATCTGCCTC...TTCTCTCTCCCAGTCGTGATTTGTTAAAGGGCTTGGCAGAATTTTCTTAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | TCTTCTAAGAAAATTCTGCCAAGCCCTTTAACAAATCACGACTGGGAGAGAGAATTCAGGGAGTTCTGCTaGGGGGCGTTAGCTATTAAA | + |
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Preference number: 4 (lower is better) Translates to: SSKKILPSPLTNHDWEREFREFC*GALAIK Trigger: TTTAATAGCTAACGCCCCCCAGCAGAACTCCCTGAA...TTCTCTCTCCCAGTCGTGATTTGTTAAAGGGCTTGGCAGAATTTTCTTAGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR TCA 90 bp | GTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATGCTTTGAAAATCTCATTGTTGAAGTaGTCTAAGCCCATGCATGCC | + |
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Preference number: 4 (lower is better) Translates to: VYCLSQLIPTFLSGYALKISLLK*SKPMHA Trigger: GGCATGCATGGGCTTAGATCACTTCAACAATGAGAT...TTTCAAAGCATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR GCA 90 bp | TCTTCTAAGAAAATTCTGCCAAGCCCTTTAACAAATCACGACTGGGAGAGAGAATGCCGTAGATCCTACTaGTGGAGAATTTGCATCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSKKILPSPLTNHDWERECRRSY*WRICIS Trigger: AGAGATGCAAATTCTCCAGCAGTAGGATCTACGGCA...TTCTCTCTCCCAGTCGTGATTTGTTAAAGGGCTTGGCAGAATTTTCTTAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR GCA 90 bp | TCTTCTAAGAAAATTCTGCCAAGCCCTTTAACAAATCACGACTGGGAGAGAGAAAGTGATCTAAGCCCATaGATGCCATCTCTTCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SSKKILPSPLTNHDWERESDLSP*MPSLRQ Trigger: TTGACGAAGAGATGGCATGCATGGGCTTAGATCACT...TTCTCTCTCCCAGTCGTGATTTGTTAAAGGGCTTGGCAGAATTTTCTTAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | GTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATGCTTTGAAAAGTTGGACGCCTTCCTaGAATGACCAAGTTAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: VYCLSQLIPTFLSGYALKSWTPS*NDQVKG Trigger: ACCTTTAACTTGGTCATTCCAGGAAGGCGTCCAACT...TTTCAAAGCATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | GACATTACACCTGGCACGGTGACTTTCTATTCCTTATGGAGGGTAAACACACTGTCTCATAGAACTTCATaGAATCTAAGGTGGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: DITPGTVTFYSLWRVNTLSHRTS*NLRWKL Trigger: CAACTTCCACCTTAGATTCCATGAAGTTCTATGAGA...CAGTGTGTTTACCCTCCATAAGGAATAGAAAGTCACCGTGCCAGGTGTAATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CCA 90 bp | CTATTCCTTATGGAGGGTAAACACACTGGCATTGTCAACAGCTTGAGTGAGAAGCCAAATCATAACTCTTaGGGAAGGATAAGCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: LFLMEGKHTGIVNSLSEKPNHNS*GRISNH Trigger: ATGATTGCTTATCCTTCCCCAAGAGTTATGATTTGG...CTTCTCACTCAAGCTGTTGACAATGCCAGTGTGTTTACCCTCCATAAGGAATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 90 bp | AAGCGTCCGTCGTGCCTCCAGAAGTTGGTGACCGGGAAGCCGCCGTaGCCTCGGCAGGGAATAAGCTTCAGGGGTCCATTGCAGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: KRPSCLQKLVTGKPP*PRQGISFRGPLQLG Trigger: TCCCAACTGCAATGGACCCCTGAAGCTTATTCCCTGCCGAGGCCACGGCGGCTTCCCGGTCACCAACTTCTGGAGGCACGACGGACGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS TCA 90 bp | ATGGCTCTTCTTGCCTCTGCTTCCAGCTTGGTCTCCGGCCTGGGATaGTCATGCTCGCCTTTGGACTGGAAAAAGATGAAGCGTCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: MALLASASSLVSGLG*SCSPLDWKKMKRPS Trigger: CGACGGACGCTTCATCTTTTTCCAGTCCAAAGGCGAGCATGATCATCCCAGGCCGGAGACCAAGCTGGAAGCAGAGGCAAGAAGAGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 90 bp | AGTGCTCCAAAGAGTTCTGGGAGGGAAAGTAGTCGTAGGGCCAGCTaGCCACAGGCAGAGGATAGGCTGGATAGTAGATGTCATCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SAPKSSGRESSRRAS*PQAEDRLDSRCHRR Trigger: CCTCCGATGACATCTACTATCCAGCCTATCCTCTGCCTGTGGCCAGCTGGCCCTACGACTACTTTCCCTCCCAGAACTCTTTGGAGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 90 bp | TGGGACAGCTTTTCCTCTGCTGCTTCTGTCTGGCTTTGTCACAGATaGCGGGTCTCAGGTAAATCTTGCGGCCTTCCTCTGTGGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: WDSFSSAASVWLCHR*RVSGKSCGLPLWSS Trigger: ACTGCTCCACAGAGGAAGGCCGCAAGATTTACCTGAGACCCGCCATCTGTGACAAAGCCAGACAGAAGCAGCAGAGGAAAAGCTGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 90 bp | GGGGTCCATTGCAGTTGGGACAGCTTTTCCTCTGCTGCTTCTGTCTaGCTTTGTCACAGATGGCGGGTCTCAGGTAAATCTTGCGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: GVHCSWDSFSSAASV*LCHRWRVSGKSCGL Trigger: AAGGCCGCAAGATTTACCTGAGACCCGCCATCTGTGACAAAGCCAGACAGAAGCAGCAGAGGAAAAGCTGTCCCAACTGCAATGGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 90 bp | TCAGATCCACAGATACTTTCTCTTCGTAAGGCTCACCTCCCGGATTaGACCACAAGGGATGACAGCCTGGTTGAGCTGCAGGGGGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: SDPQILSLRKAHLPD*TTRDDSLVELQGVL Trigger: CAGAACCCCCTGCAGCTCAACCAGGCTGTCATCCCTTGTGGTCCAATCCGGGAGGTGAGCCTTACGAAGAGAAAGTATCTGTGGATCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CAA 90 bp | GTCTCTCTACATAGTCCTGGCTCTCCTGGAACTCAGTATGTAAACTCGGCTGGCTCAAAATCCCACCTGTaGCTCTTGCCGGGCAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: VSLHSPGSPGTQYVNSAGSKSHL*LLPGSA Trigger: TGCACTGCCCGGCAAGAGCAACAGGTGGGATTTTGA...GCCAGCCGAGTTTACATACTGAGTTCCAGGAGAGCCAGGACTATGTAGAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CAA 90 bp | GTAAACTCGGCTGGCCTTGAACTCACAAATATCCAACTGCCTCTGTCTCCTGAGAGCTTCAGGGGTCCATaGCAGTTGGGACAGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: VNSAGLELTNIQLPLSPESFRGP*QLGQLF Trigger: GAAAAGCTGTCCCAACTGCAATGGACCCCTGAAGCT...CTCAGGAGACAGAGGCAGTTGGATATTTGTGAGTTCAAGGCCAGCCGAGTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CAA 90 bp | TCTTCTAAGAAAATTCTGCCAAGCCCTTTAACAAATCACGACTGGGAGAGAGAATCGTGCCTCCAGAAGTaGGTGACCGGGAAGCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: SSKKILPSPLTNHDWERESCLQK*VTGKPP Trigger: CGGCGGCTTCCCGGTCACCAACTTCTGGAGGCACGA...TTCTCTCTCCCAGTCGTGATTTGTTAAAGGGCTTGGCAGAATTTTCTTAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CAA 90 bp | TCTTCTAAGAAAATTCTGCCAAGCCCTTTAACAAATCACGACTGGGAGAGAGAAGCCGGGCAGTGCATGTaGCTGCTGAGTAGGAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: SSKKILPSPLTNHDWEREAGQCM*LLSRRA Trigger: GGCTCTCCTACTCAGCAGCAACATGCACTGCCCGGC...TTCTCTCTCCCAGTCGTGATTTGTTAAAGGGCTTGGCAGAATTTTCTTAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CAA 90 bp | GAAGACCTTGTCTACTGCTTGTCACAATTGATTCCAACATTCCTCTCAGGCTATCCCAGGCATGACTTCTaGAGGATCCGGGAGTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: EDLVYCLSQLIPTFLSGYPRHDF*RIRELW Trigger: CCACAACTCCCGGATCCTCAAGAAGTCATGCCTGGG...ATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGACAAGGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS GCA 90 bp | CAGGGACAGGAGGCTGAAACTGCTCTTCACTGCCGTAGATCCTACTaGTGGAGAATTTGCATCTCTCATAGAACTTCATGGAATCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: QGQEAETALHCRRSY*WRICISHRTSWNLR Trigger: CCTTAGATTCCATGAAGTTCTATGAGAGATGCAAATTCTCCAGCAGTAGGATCTACGGCAGTGAAGAGCAGTTTCAGCCTCCTGTCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 90 bp | GGACAGGAGGCTGAAACTGCTCTTCACTGCCGTAGATCCTACTGCTaGAGAATTTGCATCTCTCATAGAACTTCATGGAATCTAAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: GQEAETALHCRRSYC*RICISHRTSWNLRW Trigger: CCACCTTAGATTCCATGAAGTTCTATGAGAGATGCAAATTCTCCAGCAGTAGGATCTACGGCAGTGAAGAGCAGTTTCAGCCTCCTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CAA 90 bp | TCTTCTAAGAAAATTCTGCCAAGCCCTTTAACAAATCACGACTGGGAGAGAGAATGCTTCTGTCTGGCTTaGTCACAGATGGCGGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: SSKKILPSPLTNHDWERECFCLA*SQMAGL Trigger: GAGACCCGCCATCTGTGACAAAGCCAGACAGAAGCA...TTCTCTCTCCCAGTCGTGATTTGTTAAAGGGCTTGGCAGAATTTTCTTAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS-3UTR CAA 90 bp | TCTTCTAAGAAAATTCTGCCAAGCCCTTTAACAAATCACGACTGGGAGAGAGAAAGGGGTCCATTGCAGTaGGGACAGCTTTTCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SSKKILPSPLTNHDWERERGPLQ*GQLFLC Trigger: GCAGAGGAAAAGCTGTCCCAACTGCAATGGACCCCT...TTCTCTCTCCCAGTCGTGATTTGTTAAAGGGCTTGGCAGAATTTTCTTAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS GCA 90 bp | GCTGAAACTGCTCTTCACTGCCGTAGATCCTACTGCTGGAGAATTTaGATCTCTCATAGAACTTCATGGAATCTAAGGTGGAAGTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: AETALHCRRSYCWRI*ISHRTSWNLRWKLD Trigger: ATCCAACTTCCACCTTAGATTCCATGAAGTTCTATGAGAGATGCAAATTCTCCAGCAGTAGGATCTACGGCAGTGAAGAGCAGTTTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 72 bp | TCGTGCCTCCAGAAGTTGGTGACCGGGAAGCCGCCGTaGCCTCGGCAGGGAATAAGCTTCAGGGGTCCATTG | + |
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Preference number: 6 (lower is better) Translates to: SCLQKLVTGKPP*PRQGISFRGPL Trigger: CAATGGACCCCTGAAGCTTATTCCCTGCCGAGGCCACGGCGGCTTCCCGGTCACCAACTTCTGGAGGCACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CAA 72 bp | TGGAAAAAGATGAAGCGTCCGTCGTGCCTCCAGAAGTaGGTGACCGGGAAGCCGCCGTGGCCTCGGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: WKKMKRPSCLQK*VTGKPPWPRQG Trigger: TCCCTGCCGAGGCCACGGCGGCTTCCCGGTCACCAACTTCTGGAGGCACGACGGACGCTTCATCTTTTTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS GCA 72 bp | TCGCCTTTGGACTGGAAAAAGATGAAGCGTCCGTCGTaGCTCCAGAAGTTGGTGACCGGGAAGCCGCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: SPLDWKKMKRPS*LQKLVTGKPPW Trigger: CCACGGCGGCTTCCCGGTCACCAACTTCTGGAGGCACGACGGACGCTTCATCTTTTTCCAGTCCAAAGGCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CAA 90 bp | GGGAAGCCGCCGTGGCCTCGGCAGGGAATAAGCTTCAGGGGTCCATaGCAGTTGGGACAGCTTTTCCTCTGCTGCTTCTGTCTGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: GKPPWPRQGISFRGP*QLGQLFLCCFCLAL Trigger: CAAAGCCAGACAGAAGCAGCAGAGGAAAAGCTGTCCCAACTGCAATGGACCCCTGAAGCTTATTCCCTGCCGAGGCCACGGCGGCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CAA 90 bp | CCTTTGGACTGGAAAAAGATGAAGCGTCCGTCGTGCCTCCAGAAGTaGGTGACCGGGAAGCCGCCGTGGCCTCGGCAGGGAATAAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLDWKKMKRPSCLQK*VTGKPPWPRQGISF Trigger: GAAGCTTATTCCCTGCCGAGGCCACGGCGGCTTCCCGGTCACCAACTTCTGGAGGCACGACGGACGCTTCATCTTTTTCCAGTCCAAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CAA 90 bp | CCGCCGTGGCCTCGGCAGGGAATAAGCTTCAGGGGTCCATTGCAGTaGGGACAGCTTTTCCTCTGCTGCTTCTGTCTGGCTTTGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: PPWPRQGISFRGPLQ*GQLFLCCFCLALSQ Trigger: CTGTGACAAAGCCAGACAGAAGCAGCAGAGGAAAAGCTGTCCCAACTGCAATGGACCCCTGAAGCTTATTCCCTGCCGAGGCCACGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS GCA 72 bp | TGGCTTTGTCACAGATGGCGGGTCTCAGGTAAATCTTaGGGCCTTCCTCTGTGGAGCAGTCCCTGCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: WLCHRWRVSGKS*GLPLWSSPCCT Trigger: TGTGCAGCAGGGACTGCTCCACAGAGGAAGGCCGCAAGATTTACCTGAGACCCGCCATCTGTGACAAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CAA 72 bp | CCGTGGCCTCGGCAGGGAATAAGCTTCAGGGGTCCATaGCAGTTGGGACAGCTTTTCCTCTGCTGCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PWPRQGISFRGP*QLGQLFLCCFC Trigger: ACAGAAGCAGCAGAGGAAAAGCTGTCCCAACTGCAATGGACCCCTGAAGCTTATTCCCTGCCGAGGCCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS GCA 72 bp | AGGGGTCCATTGCAGTTGGGACAGCTTTTCCTCTGCTaGTTCTGTCTGGCTTTGTCACAGATGGCGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RGPLQLGQLFLC*FCLALSQMAGL Trigger: GAGACCCGCCATCTGTGACAAAGCCAGACAGAAGCAGCAGAGGAAAAGCTGTCCCAACTGCAATGGACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CAA 72 bp | CCTCGGCAGGGAATAAGCTTCAGGGGTCCATTGCAGTaGGGACAGCTTTTCCTCTGCTGCTTCTGTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PRQGISFRGPLQ*GQLFLCCFCLA Trigger: AGCCAGACAGAAGCAGCAGAGGAAAAGCTGTCCCAACTGCAATGGACCCCTGAAGCTTATTCCCTGCCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CAA 72 bp | GCCTTCGCTGCTGGTCTCCCCTTCATCCGTAAGGAGTaGGAGGCAGATGCCATGTGCACTTTCTTCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: AFAAGLPFIRKE*EADAMCTFFMA Trigger: AGCCATGAAGAAAGTGCACATGGCATCTGCCTCCAACTCCTTACGGATGAAGGGGAGACCAGCAGCGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS TCA 72 bp | CTTGCCTCTGCTTCCAGCTTGGTCTCCGGCCTGGGATaGTCATGCTCGCCTTTGGACTGGAAAAAGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: LASASSLVSGLG*SCSPLDWKKMK Trigger: CTTCATCTTTTTCCAGTCCAAAGGCGAGCATGATCATCCCAGGCCGGAGACCAAGCTGGAAGCAGAGGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS GCA 72 bp | TTCGTCAAAATCCCACCTGTTGCTCTTGCCGGGCAGTaGATGTTGCTGCTGAGTAGGAGAGCCATAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: FVKIPPVALAGQ*MLLLSRRAIGE Trigger: CTCACCTATGGCTCTCCTACTCAGCAGCAACATGCACTGCCCGGCAAGAGCAACAGGTGGGATTTTGACGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 72 bp | CAGATACTTTCTCTTCGTAAGGCTCACCTCCCGGATTaGACCACAAGGGATGACAGCCTGGTTGAGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: QILSLRKAHLPD*TTRDDSLVELQ Trigger: CTGCAGCTCAACCAGGCTGTCATCCCTTGTGGTCCAATCCGGGAGGTGAGCCTTACGAAGAGAAAGTATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 72 bp | TGCAGTTGGGACAGCTTTTCCTCTGCTGCTTCTGTCTaGCTTTGTCACAGATGGCGGGTCTCAGGTAAATCT | + |
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Preference number: 6 (lower is better) Translates to: CSWDSFSSAASV*LCHRWRVSGKS Trigger: AGATTTACCTGAGACCCGCCATCTGTGACAAAGCCAGACAGAAGCAGCAGAGGAAAAGCTGTCCCAACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS GCA 72 bp | GAGGCTGAAACTGCTCTTCACTGCCGTAGATCCTACTaGTGGAGAATTTGCATCTCTCATAGAACTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: EAETALHCRRSY*WRICISHRTSW Trigger: CCATGAAGTTCTATGAGAGATGCAAATTCTCCAGCAGTAGGATCTACGGCAGTGAAGAGCAGTTTCAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS GCA 72 bp | GCTCTTCACTGCCGTAGATCCTACTGCTGGAGAATTTaGATCTCTCATAGAACTTCATGGAATCTAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ALHCRRSYCWRI*ISHRTSWNLRW Trigger: CCACCTTAGATTCCATGAAGTTCTATGAGAGATGCAAATTCTCCAGCAGTAGGATCTACGGCAGTGAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 72 bp | GCTGAAACTGCTCTTCACTGCCGTAGATCCTACTGCTaGAGAATTTGCATCTCTCATAGAACTTCATGGAAT | + |
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Preference number: 6 (lower is better) Translates to: AETALHCRRSYC*RICISHRTSWN Trigger: ATTCCATGAAGTTCTATGAGAGATGCAAATTCTCCAGCAGTAGGATCTACGGCAGTGAAGAGCAGTTTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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| CDS CCA 72 bp | TACTGCTGGAGAATTTGCATCTCTCATAGAACTTCATaGAATCTAAGGTGGAAGTTGGATCTTCCAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: YCWRICISHRTS*NLRWKLDLPAQ Trigger: CTGAGCTGGAAGATCCAACTTCCACCTTAGATTCCATGAAGTTCTATGAGAGATGCAAATTCTCCAGCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024104.9 |
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