Pregenerated sensors for GCLM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028124Ensembl transcript IDs: ENSMUST00000029769.14, ENSMUST00000149983.4, ENSMUST00000176445.8, ENSMUST00000178826.8, ENSMUST00000199699.5
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGACACCCCAGAAGAGGGCGTCAGAGCTCATTTACGGATGGTTGTaGGCCATCATGTGGTTGCTGGGATTTGAACTTGGGACCTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: QTPQKRASELIYGWL*AIMWLLGFELGTFR Trigger: TCTGAAGGTCCCAAGTTCAAATCCCAGCAACCACATGATGGCTCACAACCATCCGTAAATGAGCTCTGACGCCCTCTTCTGGGGTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 90 bp | TGTATCTTATGTTCCAGACAACAGCAGGTCGGTGAGCTGTGGGTGTaGGCTGGAGTTAAGAGCCCCTCCTTTTGGCTTGCAGAATGTAGC | + |
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Preference number: 1 (lower is better) Translates to: CILCSRQQQVGELWV*AGVKSPSFWLAECS Trigger: GCTACATTCTGCAAGCCAAAAGGAGGGGCTCTTAACTCCAGCTCACACCCACAGCTCACCGACCTGCTGTTGTCTGGAACATAAGATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
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| 3UTR GCA 90 bp | ATTGGCCTTGATCAGAACTGTGTCTTGGCTCCTTATTTCTCTCACTaGCTTTCCCATCCAACCCCATCTTTCCTCTCCAGGAACCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: IGLDQNCVLAPYFSH*LSHPTPSFLSRNPG Trigger: TCCTGGGTTCCTGGAGAGGAAAGATGGGGTTGGATGGGAAAGGCAGTGAGAGAAATAAGGAGCCAAGACACAGTTCTGATCAAGGCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR CCA 90 bp | CGTCAGAGCTCATTTACGGATGGTTGTGAGCCATCATGTGGTTGCTaGGATTTGAACTTGGGACCTTCAGAAGAGCGGTCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: RQSSFTDGCEPSCGC*DLNLGPSEERSVLL Trigger: TAAGAGCACTGACCGCTCTTCTGAAGGTCCCAAGTTCAAATCCCAGCAACCACATGATGGCTCACAACCATCCGTAAATGAGCTCTGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 90 bp | TTCTCCAAGACACCATTACCTGCTGAGAGGCTGAACCTGTTTTCATaGCACTATCCTGGCAAAGCAATTAGATCCTGGCATGGTAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: FSKTPLPAERLNLFS*HYPGKAIRSWHGRG Trigger: TCCCCTACCATGCCAGGATCTAATTGCTTTGCCAGGATAGTGTCATGAAAACAGGTTCAGCCTCTCAGCAGGTAATGGTGTCTTGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 90 bp | TGGCATGGTAGGGGATGGGTTAGACACATAAATAAACATTGGCCTTaGTCAGAACTGTGTCTTGGCTCCTTATTTCTCTCACTGCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: WHGRGWVRHINKHWP*SELCLGSLFLSLPF Trigger: GAAAGGCAGTGAGAGAAATAAGGAGCCAAGACACAGTTCTGATCAAGGCCAATGTTTATTTATGTGTCTAACCCATCCCCTACCATGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR TCA 90 bp | GTTGGGGATCGACCCCAGGCCATGTGCCTGCTACACAAGCATCCTGTCACTGGCGCACCTCCAGCCCACTaGACAGGTTGTCTCCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: VGDRPQAMCLLHKHPVTGAPPAH*TGCLPK Trigger: TTTTGGGAGACAACCTGTTCAGTGGGCTGGAGGTGC...GCCAGTGACAGGATGCTTGTGTAGCAGGCACATGGCCTGGGGTCGATCCCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
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| 3UTR CAA 90 bp | CTTTCCCATCCAACCCCATCTTTCCTCTCCAGGAACCCAGGAACCTaGGCCACTGGTGGTTACACTTGTGTACTGCGGACACAAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: LSHPTPSFLSRNPGT*ATGGYTCVLRTQEL Trigger: CAGTTCTTGTGTCCGCAGTACACAAGTGTAACCACCAGTGGCCAAGGTTCCTGGGTTCCTGGAGAGGAAAGATGGGGTTGGATGGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR CAA 90 bp | GAATACAATGTAGCTGTACAAATGGTTGTGAGCCATCATGTGGAATaGAACTCAGGACCTCTGCTTGCTCTGCACGCTTGCTCTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: EYNVAVQMVVSHHVE*NSGPLLALHACSGS Trigger: TGAGCCAGAGCAAGCGTGCAGAGCAAGCAGAGGTCCTGAGTTCAATTCCACATGATGGCTCACAACCATTTGTACAGCTACATTGTATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGAGAGAGAGGTATGTAGAGGGGTGTGTATGTATTTTGCCTGTGTGTACTATGTACCATGTATGTaGCTGGTACCACTAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: KREREVCRGVCMYFACVYYVPCM*LVPLGQ Trigger: CTGACCTAGTGGTACCAGTCACATACATGGTACATA...GTACACACAGGCAAAATACATACACACCCCTCTACATACCTCTCTCTCTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR GCA 90 bp | AAGAGAGAGAGAGAGGTATGTAGAGGGGTGTGTATGTATTTTGCCTGTGTGTACGACACTCCAGAAGAGTaGATCAGATCTCATTACGGA | + |
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Preference number: 2 (lower is better) Translates to: KREREVCRGVCMYFACVYDTPEE*IRSHYG Trigger: TCCGTAATGAGATCTGATGCACTCTTCTGGAGTGTC...GTACACACAGGCAAAATACATACACACCCCTCTACATACCTCTCTCTCTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR CAA 90 bp | TTTCCTCTCCAGGAACCCAGGAACCTTGGCCACTGGTGGTTACACTaGTGTACTGCGGACACAAGAACTGAAGATTTATTTATTATTACA | + |
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Preference number: 2 (lower is better) Translates to: FPLQEPRNLGHWWLH*CTADTRTEDLFIIT Trigger: TGTAATAATAAATAAATCTTCAGTTCTTGTGTCCGCAGTACACAAGTGTAACCACCAGTGGCCAAGGTTCCTGGGTTCCTGGAGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTGGCTCCTTATTTCTCTCACTGCCTTTCCCATCCAACCCCATCTTTCCTGTATATACATCACCCTaGTGCCTAAGCCAAAATATA | + |
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Preference number: 2 (lower is better) Translates to: CLGSLFLSLPFPSNPIFPVYTSP*CLSQNI Trigger: TATATTTTGGCTTAGGCATCAGGGTGATGTATATAC...AGGAAAGATGGGGTTGGATGGGAAAGGCAGTGAGAGAAATAAGGAGCCAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTGGCTCCTTATTTCTCTCACTGCCTTTCCCATCCAACCCCATCTTTCCTTTTGAGGAGTATTTTTaGAAGAGAGAGAGAGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: CLGSLFLSLPFPSNPIFPFEEYF*KREREV Trigger: TACCTCTCTCTCTCTCTTTCAAAAATACTCCTCAAA...AGGAAAGATGGGGTTGGATGGGAAAGGCAGTGAGAGAAATAAGGAGCCAAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTGGCTCCTTATTTCTCTCACTGCCTTTCCCATCCAACCCCATCTTTCCTGATAGCAACAGTAGTTaGTTTTATGAAACCCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: CLGSLFLSLPFPSNPIFPDSNSS*FYETPK Trigger: TTTGGGGGTTTCATAAAAGCAACTACTGTTGCTATC...AGGAAAGATGGGGTTGGATGGGAAAGGCAGTGAGAGAAATAAGGAGCCAAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR TCA 90 bp | AAATCTTCACAATTCTCTGTATGTACATTTGGCAGAAGAATGAATTGCCAGACAAATGCTCTTAACCACTaGGTCATCTCTTCAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: KSSQFSVCTFGRRMNCQTNALNH*VISSAL Trigger: CAGGGCTGAAGAGATGACTCAGTGGTTAAGAGCATT...TGTCTGGCAATTCATTCTTCTGCCAAATGTACATACAGAGAATTGTGAAGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR GCA 90 bp | AAATCTTCACAATTCTCTGTATGTACATTTGGCAGAAGAATGAATTGCCAGACATGGAAGAACAGTAGGTaGTCTTCATTACTGAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: KSSQFSVCTFGRRMNCQTWKNSR*SSLLSH Trigger: GTGGCTCAGTAATGAAGAGCACCTACTGTTCTTCCA...TGTCTGGCAATTCATTCTTCTGCCAAATGTACATACAGAGAATTGTGAAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR GCA 90 bp | AAATCTTCACAATTCTCTGTATGTACATTTGGCAGAAGAATGAATTGCCAGACAGCTGTATTAGTGTTCTaGCACCAATATGCTCGTCAG | + |
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Preference number: 2 (lower is better) Translates to: KSSQFSVCTFGRRMNCQTAVLVF*HQYARQ Trigger: CTGACGAGCATATTGGTGGCAGAACACTAATACAGC...TGTCTGGCAATTCATTCTTCTGCCAAATGTACATACAGAGAATTGTGAAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR CAA 90 bp | ATGATCCCTTCACAAAATGAACCCATAATTCTACTTCCTTCCATGTaGAGGTTTGATGTCGTTCACAAACATCTGGATATATCAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: MIPSQNEPIILLPSM*RFDVVHKHLDISAK Trigger: CTTTGCTGATATATCCAGATGTTTGTGAACGACATCAAACCTCAACATGGAAGGAAGTAGAATTATGGGTTCATTTTGTGAAGGGATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR CCA 90 bp | ATGTTGAGGTTTGATGTCGTTCACAAACATCTGGATATATCAGCAAAGGAAGGTTTTGTAGATAAGAGGTaGAAGAAACATGACCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: MLRFDVVHKHLDISAKEGFVDKR*KKHDPE Trigger: TTCTGGGTCATGTTTCTTCCACCTCTTATCTACAAA...ACCTTCCTTTGCTGATATATCCAGATGTTTGTGAACGACATCAAACCTCAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR TCA 90 bp | AAATCTTCACAATTCTCTGTATGTACATTTGGCAGAAGAATGAATTGCCAGACAAAAGTTTTACTTGGCTaGTTCTTAGTTCATCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: KSSQFSVCTFGRRMNCQTKVLLG*FLVHLS Trigger: GGAGAGATGAACTAAGAATCAGCCAAGTAAAACTTT...TGTCTGGCAATTCATTCTTCTGCCAAATGTACATACAGAGAATTGTGAAGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR CCA 90 bp | TCACAAAATGAACCCATAATTCTACTTCCTTCCATGTTGAGGTTTGATGTCGTTTTTGTGTGCATGTCCTaGGGTTTAAAAACAATAAAG | + |
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Preference number: 2 (lower is better) Translates to: SQNEPIILLPSMLRFDVVFVCMS*GLKTIK Trigger: CTTTATTGTTTTTAAACCCCAGGACATGCACACAAA...AACGACATCAAACCTCAACATGGAAGGAAGTAGAATTATGGGTTCATTTTGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR GCA 72 bp | TGCAGAGGCACGGGAGGCCCTCAAAACTCAACACAGTaGCGAACAACTGCACTCGCACCTCGGGGATGCTTC | + |
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Preference number: 3 (lower is better) Translates to: CRGTGGPQNSTQ*RTTALAPRGCF Trigger: GAAGCATCCCCGAGGTGCGAGTGCAGTTGTTCGGCACTGTGTTGAGTTTTGAGGGCCTCCCGTGCCTCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029769.14 ENSMUST00000149983.4 |
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| 3UTR CCA 72 bp | TGTGCCCTCCTCCCATCCTTGAGCAGGCTGCTCAGCTaGTTTGCCACAGTTGCTAGCCCACCTAGAGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: CALLPSLSRLLS*FATVASPPRVE Trigger: CTCCACTCTAGGTGGGCTAGCAACTGTGGCAAACCAGCTGAGCAGCCTGCTCAAGGATGGGAGGAGGGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 72 bp | ACGTCCGCATGCTTGTGTGTGCCCTCCTCCCATCCTTaGGCAGGCTGCTCAGCTGGTTTGCCACAGTTGCTA | + |
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Preference number: 3 (lower is better) Translates to: TSACLCVPSSHP*AGCSAGLPQLL Trigger: TAGCAACTGTGGCAAACCAGCTGAGCAGCCTGCTCAAGGATGGGAGGAGGGCACACACAAGCATGCGGACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR CCA 72 bp | GAACTCAGGACCTCTGCTTGCTCTGCACGCTTGCTCTaGCTCACTAACGTCCGCATGCTTGTGTGTGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: ELRTSACSARLL*LTNVRMLVCAL Trigger: GAGGGCACACACAAGCATGCGGACGTTAGTGAGCCAGAGCAAGCGTGCAGAGCAAGCAGAGGTCCTGAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 72 bp | TGTTCCAGACAACAGCAGGTCGGTGAGCTGTGGGTGTaGGCTGGAGTTAAGAGCCCCTCCTTTTGGCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: CSRQQQVGELWV*AGVKSPSFWLA Trigger: TGCAAGCCAAAAGGAGGGGCTCTTAACTCCAGCTCACACCCACAGCTCACCGACCTGCTGTTGTCTGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
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| 3UTR CCA 72 bp | CAACCCCATCTTTCCTCTCCAGGAACCCAGGAACCTTaGCCACTGGTGGTTACACTTGTGTACTGCGGACAC | + |
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Preference number: 3 (lower is better) Translates to: QPHLSSPGTQEP*PLVVTLVYCGH Trigger: GTGTCCGCAGTACACAAGTGTAACCACCAGTGGCCAAGGTTCCTGGGTTCCTGGAGAGGAAAGATGGGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 72 bp | CGGATGGTTGTGAGCCATCATGTGGTTGCTGGGATTTaGACTTGGGACCTTCAGAAGAGCGGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TWDLQKSGQCS Trigger: AGAGCACTGACCGCTCTTCTGAAGGTCCCAAGTTCAAATCCCAGCAACCACATGATGGCTCACAACCATCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR CAA 90 bp | TGTCTTGGCTCCTTATTTCTCTCACTGCCTTTCCCATCCAACCCCATCTTTCCTAGGAACCCAGGAACCTaGGCCACTGGTGGTTACACT | + |
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Preference number: 3 (lower is better) Translates to: CLGSLFLSLPFPSNPIFPRNPGT*ATGGYT Trigger: AGTGTAACCACCAGTGGCCAAGGTTCCTGGGTTCCT...AGGAAAGATGGGGTTGGATGGGAAAGGCAGTGAGAGAAATAAGGAGCCAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR CCA 72 bp | ATCTTTCCTCTCCAGGAACCCAGGAACCTTGGCCACTaGTGGTTACACTTGTGTACTGCGGACACAAGAACT | + |
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Preference number: 3 (lower is better) Translates to: IFPLQEPRNLGH*WLHLCTADTRT Trigger: AGTTCTTGTGTCCGCAGTACACAAGTGTAACCACCAGTGGCCAAGGTTCCTGGGTTCCTGGAGAGGAAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 72 bp | ACATCTGCGGGTTTTCTCCAAGACACCATTACCTGCTaGGAGGCTGAACCTGTTTTCATGACACTATCCTGG | + |
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Preference number: 3 (lower is better) Translates to: TSAGFLQDTITC*EAEPVFMTLSW Trigger: CCAGGATAGTGTCATGAAAACAGGTTCAGCCTCTCAGCAGGTAATGGTGTCTTGGAGAAAACCCGCAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR CCA 72 bp | TCATTTACGGATGGTTGTGAGCCATCATGTGGTTGCTaGGATTTGAACTTGGGACCTTCAGAAGAGCGGTCA | + |
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Preference number: 3 (lower is better) Translates to: SFTDGCEPSCGC*DLNLGPSEERS Trigger: TGACCGCTCTTCTGAAGGTCCCAAGTTCAAATCCCAGCAACCACATGATGGCTCACAACCATCCGTAAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 72 bp | ACACCATTACCTGCTGAGAGGCTGAACCTGTTTTCATaGCACTATCCTGGCAAAGCAATTAGATCCTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: TPLPAERLNLFS*HYPGKAIRSWH Trigger: ATGCCAGGATCTAATTGCTTTGCCAGGATAGTGTCATGAAAACAGGTTCAGCCTCTCAGCAGGTAATGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR CCA 72 bp | CGCCTTCTTAGACACTCTGCCTTTGTAGATAAGAGGTaGAAGAAACATGACCCAGAACATGTGGTCAATGCA | + |
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Preference number: 3 (lower is better) Translates to: RLLRHSAFVDKR*KKHDPEHVVNA Trigger: TGCATTGACCACATGTTCTGGGTCATGTTTCTTCCACCTCTTATCTACAAAGGCAGAGTGTCTAAGAAGGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR CAA 90 bp | TGTCTTGGCTCCTTATTTCTCTCACTGCCTTTCCCATCCAACCCCATCTTTCCTTGGCAGAAGAATGAATaGCCAGACAATATATATCAG | + |
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Preference number: 3 (lower is better) Translates to: CLGSLFLSLPFPSNPIFPWQKNE*PDNIYQ Trigger: CTGATATATATTGTCTGGCAATTCATTCTTCTGCCA...AGGAAAGATGGGGTTGGATGGGAAAGGCAGTGAGAGAAATAAGGAGCCAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR-3UTR CAA 90 bp | TATTTCCAGTTAACAGCACTGTACCTTTCTCACAGCACAGACTTTAAACTAATGTGTGTGTGTATAATGTaGGGGATCGACCCCAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: YFQLTALYLSHSTDFKLMCVCIM*GIDPRP Trigger: TGGCCTGGGGTCGATCCCCAACATTATACACACACA...CATTAGTTTAAAGTCTGTGCTGTGAGAAAGGTACAGTGCTGTTAACTGGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
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| 3UTR TCA 72 bp | AGGGGATGGGTTAGACACATAAATAAACATTGGCCTTaGTCAGAACTGTGTCTTGGCTCCTTATTTCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: RGWVRHINKHWP*SELCLGSLFLS Trigger: TGAGAGAAATAAGGAGCCAAGACACAGTTCTGATCAAGGCCAATGTTTATTTATGTGTCTAACCCATCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 72 bp | ATCAAACTCTGCCACATCCCTTCATCAATTTTATGTTaGAAAGAGAGGGAGTTGATGTTGAAGCACTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: IKLCHIPSSILC*KERELMLKHWK Trigger: TTTCCAGTGCTTCAACATCAACTCCCTCTCTTTTCAACATAAAATTGATGAAGGGATGTGGCAGAGTTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR GCA 72 bp | ATAACTGAAATTACAGATATTTGTGAGCTACTATGTTaGTGTGAGAACCTGAACCTAGATCCTCTGCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: ITEITDICELLC*CENLNLDPLQE Trigger: CTCTTGCAGAGGATCTAGGTTCAGGTTCTCACAGCAACATAGTAGCTCACAAATATCTGTAATTTCAGTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 72 bp | CTTCACAATTCTCTGTATGTACATTTGGCAGAAGAATaGATTGCCAGACAATATATATCAGTGATCAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: LHNSLYVHLAEE*IARQYISVISC Trigger: GCAACTGATCACTGATATATATTGTCTGGCAATTCATTCTTCTGCCAAATGTACATACAGAGAATTGTGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR TCA 72 bp | GGATCTTGTGTAACACACAGCACACTGTTGAGTGAATaGATAGCTTTATGGCTTAGATATTGTTCAAATAAC | + |
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Preference number: 3 (lower is better) Translates to: GSCVTHSTLLSE*IALWLRYCSNN Trigger: GTTATTTGAACAATATCTAAGCCATAAAGCTATTCATTCACTCAACAGTGTGCTGTGTGTTACACAAGATCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR TCA 90 bp | CTGCTACACAAGCATCCTGTCACTGGCCCGCACCTCCAGCCCACTGAACAGGTTTCGGAGGCGAAGCCATaGTCACAGAGTCCAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LLHKHPVTGPHLQPTEQVSEAKP*SQSPAV Trigger: CACAGCTGGACTCTGTGATCATGGCTTCGCCTCCGA...AACCTGTTCAGTGGGCTGGAGGTGCGGGCCAGTGACAGGATGCTTGTGTAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
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| CDS-3UTR GCA 90 bp | GTATCTTATGTTCCAGACAACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGAGCAGGTTCCCGGTCTaGAGGTGCAGGGTGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VSYVPDNSRSVSCGCELESRFPV*RCRVLA Trigger: GGCCAGCACCCTGCACCTGCAGACCGGGAACCTGCT...CTCCAGCTCACACCCACAGCTCACCGACCTGCTGTTGTCTGGAACATAAGATAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR CAA 72 bp | AACGTCCGCATGCTTGTGTGTGCCCTCCTCCCATCCTaGAGCAGGCTGCTCAGCTGGTTTGCCACAGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: NVRMLVCALLPS*SRLLSWFATVA Trigger: AGCAACTGTGGCAAACCAGCTGAGCAGCCTGCTCAAGGATGGGAGGAGGGCACACACAAGCATGCGGACGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR TCA 90 bp | AACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGTTAAGAGCCCCTCCTTTTTCGGAGGCGAAGCCATaGTCACAGAGTCCAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NSRSVSCGCELELRAPPFSEAKP*SQSPAV Trigger: CACAGCTGGACTCTGTGATCATGGCTTCGCCTCCGA...AAAAGGAGGGGCTCTTAACTCCAGCTCACACCCACAGCTCACCGACCTGCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
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| CDS-3UTR GCA 90 bp | GTTCCAGACAACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGTTAAGAGCCCACAGAGTCCAGCTGTaGAACTCCAAGGACGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VPDNSRSVSCGCELELRAHRVQL*NSKDGA Trigger: TGCTCCGTCCTTGGAGTTGCACAGCTGGACTCTGTG...GGCTCTTAACTCCAGCTCACACCCACAGCTCACCGACCTGCTGTTGTCTGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGGTATGTAGAGGGGTGTGTATGTATTTTGCCTGTGTGTACATCTGCAGGTGCAGGGTaGTGGCCCGCGCCAGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RERERYVEGCVCILPVCTSAGAG*WPAPGA Trigger: CGCTCCTGGCGCGGGCCAGCACCCTGCACCTGCAGA...TGTACACACAGGCAAAATACATACACACCCCTCTACATACCTCTCTCTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGAGAGAGAGGTATGTAGAGGGGTGTGTATGTATTTTGCCTGTGTGTACTTCCCGGTCTGCAGGTaGAGGGTGCTGGCCCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KREREVCRGVCMYFACVYFPVCR*RVLARA Trigger: GGCGCGGGCCAGCACCCTGCACCTGCAGACCGGGAA...GTACACACAGGCAAAATACATACACACCCCTCTACATACCTCTCTCTCTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGACAACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGTTAAGAGCCCAGAGAGCAGTTCTGTaGCCACTGATACAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPDNSRSVSCGCELELRAQRAVL*PLIQLL Trigger: GAGCAGCTGTATCAGTGGGCACAGAACTGCTCTCTG...GGCTCTTAACTCCAGCTCACACCCACAGCTCACCGACCTGCTGTTGTCTGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
||
| CDS-3UTR CCA 90 bp | AACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGTTAAGAGCCCCTCCTTTTAGCGGCACCCAATCCTaGGCTTCAATGTCAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NSRSVSCGCELELRAPPFSGTQS*ASMSGM Trigger: CATCCCTGACATTGAAGCCCAGGATTGGGTGCCGCT...AAAAGGAGGGGCTCTTAACTCCAGCTCACACCCACAGCTCACCGACCTGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
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| 3UTR CAA 72 bp | CCAACCCCATCTTTCCTCTCCAGGAACCCAGGAACCTaGGCCACTGGTGGTTACACTTGTGTACTGCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PTPSFLSRNPGT*ATGGYTCVLRT Trigger: TGTCCGCAGTACACAAGTGTAACCACCAGTGGCCAAGGTTCCTGGGTTCCTGGAGAGGAAAGATGGGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR TCA 90 bp | CTGCTACACAAGCATCCTGTCACTGGCCCGCACCTCCAGCCCACTGAACAGGTTCCTTTCGGGTCATTGTaGGTCAGTAGCTGTATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLHKHPVTGPHLQPTEQVPFGSL*VSSCMS Trigger: TGACATACAGCTACTGACTCACAATGACCCGAAAGG...AACCTGTTCAGTGGGCTGGAGGTGCGGGCCAGTGACAGGATGCTTGTGTAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
||
| CDS-3UTR CCA 90 bp | AAGCATCCTGTCACTGGCCCGCACCTCCAGCCCACTGAACAGGTTGTCTCCCAAAAAGGCAGTCAAATCTaGTGGCATCACACAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KHPVTGPHLQPTEQVVSQKGSQI*WHHTAG Trigger: TCCTGCTGTGTGATGCCACCAGATTTGACTGCCTTT...TTGGGAGACAACCTGTTCAGTGGGCTGGAGGTGCGGGCCAGTGACAGGATGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
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| 3UTR CAA 72 bp | GGAATTGAACTCAGGACCTCTGCTTGCTCTGCACGCTaGCTCTGGCTCACTAACGTCCGCATGCTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GIELRTSACSAR*LWLTNVRMLVC Trigger: ACACACAAGCATGCGGACGTTAGTGAGCCAGAGCAAGCGTGCAGAGCAAGCAGAGGTCCTGAGTTCAATTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR GCA 90 bp | AACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGTTAAGAGCCCCTCCTTTTAGCTTCCTGGAAACTTaGCTCAGAGAGCAGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSRSVSCGCELELRAPPFSFLET*LREQFC Trigger: ACAGAACTGCTCTCTGAGGCAAGTTTCCAGGAAGCT...AAAAGGAGGGGCTCTTAACTCCAGCTCACACCCACAGCTCACCGACCTGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
||
| CDS-3UTR TCA 90 bp | AACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGTTAAGAGCCCCTCCTTTTTCAGGGATGCTTTCTTaGAGAGCTTCCTGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NSRSVSCGCELELRAPPFSGMLS*RASWKL Trigger: AAGTTTCCAGGAAGCTCTTCAAGAAAGCATCCCTGA...AAAAGGAGGGGCTCTTAACTCCAGCTCACACCCACAGCTCACCGACCTGCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
||
| CDS-3UTR CCA 90 bp | GTATCTTATGTTCCAGACAACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGCCACTGCATGGGACATaGTGCATTCCAAAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSYVPDNSRSVSCGCELEPLHGT*CIPKHL Trigger: CAGATGTTTTGGAATGCACCATGTCCCATGCAGTGG...CTCCAGCTCACACCCACAGCTCACCGACCTGCTGTTGTCTGGAACATAAGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029769.14 ENSMUST00000149983.4 |
||
| CDS-3UTR CCA 90 bp | TGTATAATGTTGGGGATCGACCCCAGGCCATGTGCCTGCTACACAAGCATCCTGCCACTGCATGGGACATaGTGCATTCCAAAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: CIMLGIDPRPCACYTSILPLHGT*CIPKHL Trigger: CAGATGTTTTGGAATGCACCATGTCCCATGCAGTGG...CAGGATGCTTGTGTAGCAGGCACATGGCCTGGGGTCGATCCCCAACATTATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
||
| 3UTR CAA 72 bp | GGTTGTGAGCCATCATGTGGTTGCTGGGATTTGAACTaGGGACCTTCAGAAGAGCGGTCAGTGCTCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: GCEPSCGCWDLN*GPSEERSVLLT Trigger: GGTTAAGAGCACTGACCGCTCTTCTGAAGGTCCCAAGTTCAAATCCCAGCAACCACATGATGGCTCACAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR TCA 90 bp | TCACAAAATGAACCCATAATTCTACTTCCTTCCATGTTGAGGTTTGATGTCGTTGCAGGCGGCCCCAGTTaGGCAGGTTCCCGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQNEPIILLPSMLRFDVVAGGPS*AGSRSA Trigger: TGCAGACCGGGAACCTGCTCAACTGGGGCCGCCTGC...AACGACATCAAACCTCAACATGGAAGGAAGTAGAATTATGGGTTCATTTTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR CCA 90 bp | GTATCTTATGTTCCAGACAACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGTCATTCAAGGTCTTTTaGATACAGTCCCGAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSYVPDNSRSVSCGCELESFKVF*IQSRSS Trigger: GGAGCTTCGGGACTGTATCCAAAAGACCTTGAATGA...CTCCAGCTCACACCCACAGCTCACCGACCTGCTGTTGTCTGGAACATAAGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR GCA 90 bp | GTATCTTATGTTCCAGACAACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGCTTCAATGTCAGGGATaGTTTCTTGAAGAGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSYVPDNSRSVSCGCELELQCQG*FLEELP Trigger: AGGAAGCTCTTCAAGAAAGCATCCCTGACATTGAAG...CTCCAGCTCACACCCACAGCTCACCGACCTGCTGTTGTCTGGAACATAAGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029769.14 ENSMUST00000149983.4 |
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| CDS-3UTR CCA 90 bp | GTATCTTATGTTCCAGACAACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGGAGGCCAGGTTAACTTaGTTACTATTGGGTTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: VSYVPDNSRSVSCGCELEEARLT*LLLGFT Trigger: GGTAAAACCCAATAGTAACCAAGTTAACCTGGCCTC...CTCCAGCTCACACCCACAGCTCACCGACCTGCTGTTGTCTGGAACATAAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| 3UTR CAA 72 bp | CCCTCCGCCTTTCCTGGCTTTACTCCTTGTCGGCAATaGATAGGTACAGAGATCAAAAGTTTTACTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSAFPGFTPCRQ*IGTEIKSFTWL Trigger: CAGCCAAGTAAAACTTTTGATCTCTGTACCTATCAATTGCCGACAAGGAGTAAAGCCAGGAAAGGCGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR GCA 90 bp | ATGTTGAGGTTTGATGTCGTTCACAAACATCTGGATATATCAGCAAAGGAAGGTCACAGAGTCCAGCTGTaGAACTCCAAGGACGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MLRFDVVHKHLDISAKEGHRVQL*NSKDGA Trigger: TGCTCCGTCCTTGGAGTTGCACAGCTGGACTCTGTG...ACCTTCCTTTGCTGATATATCCAGATGTTTGTGAACGACATCAAACCTCAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR GCA 90 bp | TGTCTTGGCTCCTTATTTCTCTCACTGCCTTTCCCATCCAACCCCATCTTTCCTCTTCAATGTCAGGGATaGTTTCTTGAAGAGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLGSLFLSLPFPSNPIFPLQCQG*FLEELP Trigger: AGGAAGCTCTTCAAGAAAGCATCCCTGACATTGAAG...AGGAAAGATGGGGTTGGATGGGAAAGGCAGTGAGAGAAATAAGGAGCCAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR CCA 90 bp | CCTTTTGGCTTGCAGAATGTAGCCTTTAGACTTGATGATTCCCCTGCTCTTCACATCTTCTCCACTGCATaGGACATGGTGCATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PFGLQNVAFRLDDSPALHIFSTA*DMVHSK Trigger: TTTGGAATGCACCATGTCCCATGCAGTGGAGAAGAT...GTGAAGAGCAGGGGAATCATCAAGTCTAAAGGCTACATTCTGCAAGCCAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGAGAGAGAGGTATGTAGAGGGGTGTGTATGTATTTTGCCTGTGTGTACAAGAGCCCCTCCTTTTaGCTTGCAGAATGTAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KREREVCRGVCMYFACVYKSPSF*LAECSL Trigger: AAGGCTACATTCTGCAAGCCAAAAGGAGGGGCTCTT...GTACACACAGGCAAAATACATACACACCCCTCTACATACCTCTCTCTCTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR TCA 90 bp | AAATCTTCACAATTCTCTGTATGTACATTTGGCAGAAGAATGAATTGCCAGACATCGGAGGCGAAGCCATaGTCACAGAGTCCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSSQFSVCTFGRRMNCQTSEAKP*SQSPAV Trigger: CACAGCTGGACTCTGTGATCATGGCTTCGCCTCCGA...TGTCTGGCAATTCATTCTTCTGCCAAATGTACATACAGAGAATTGTGAAGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR TCA 90 bp | AAGAGAGAGAGAGAGGTATGTAGAGGGGTGTGTATGTATTTTGCCTGTGTGTACTCAGGGATGCTTTCTTaGAGAGCTTCCTGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KREREVCRGVCMYFACVYSGMLS*RASWKL Trigger: AAGTTTCCAGGAAGCTCTTCAAGAAAGCATCCCTGA...GTACACACAGGCAAAATACATACACACCCCTCTACATACCTCTCTCTCTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR CCA 90 bp | AGGAGCCTGCCAACTGTTTTCCAACTCCACTATTGCAGAGACAAAAATAAAGACTCATTCAAGGTCTTTTaGATACAGTCCCGAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLPTVFQLHYCRDKNKDSFKVF*IQSRSS Trigger: GGAGCTTCGGGACTGTATCCAAAAGACCTTGAATGA...GTCTTTATTTTTGTCTCTGCAATAGTGGAGTTGGAAAACAGTTGGCAGGCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCTGCCAACTGTTTTCCAACTCCACTATTGCAGAGACAAAAATAAAGACGGAGGCCAGGTTAACTTaGTTACTATTGGGTTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: GACQLFSNSTIAETKIKTEARLT*LLLGFT Trigger: GGTAAAACCCAATAGTAACCAAGTTAACCTGGCCTC...CGTCTTTATTTTTGTCTCTGCAATAGTGGAGTTGGAAAACAGTTGGCAGGCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
||
| CDS-3UTR CCA 90 bp | AAATCTTCACAATTCTCTGTATGTACATTTGGCAGAAGAATGAATTGCCAGACAAGCGGCACCCAATCCTaGGCTTCAATGTCAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSSQFSVCTFGRRMNCQTSGTQS*ASMSGM Trigger: CATCCCTGACATTGAAGCCCAGGATTGGGTGCCGCT...TGTCTGGCAATTCATTCTTCTGCCAAATGTACATACAGAGAATTGTGAAGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR CCA 90 bp | CTGCCAACTGTTTTCCAACTCCACTATTGCAGAGACAAAAATAAAGACGTGGATATCTTCTCCACTGCATaGGACATGGTGCATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPTVFQLHYCRDKNKDVDIFSTA*DMVHSK Trigger: TTTGGAATGCACCATGTCCCATGCAGTGGAGAAGAT...ATCCACGTCTTTATTTTTGTCTCTGCAATAGTGGAGTTGGAAAACAGTTGGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
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| 3UTR CAA 72 bp | GACTTTACAGCACATGAACCTAGCTTGAAAGAGACCTaGATCCTTCCGATGTCTAAAATTCTTGGGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DFTAHEPSLKET*ILPMSKILGWN Trigger: ATTCCACCCAAGAATTTTAGACATCGGAAGGATCAAGGTCTCTTTCAAGCTAGGTTCATGTGCTGTAAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR TCA 90 bp | AAATCTTCACAATTCTCTGTATGTACATTTGGCAGAAGAATGAATTGCCAGACATTTACCTGTGCCCACTaGTACAGCTGCTCCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSQFSVCTFGRRMNCQTFTCAH*YSCSNC Trigger: ACAGTTGGAGCAGCTGTATCAGTGGGCACAGGTAAA...TGTCTGGCAATTCATTCTTCTGCCAAATGTACATACAGAGAATTGTGAAGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR TCA 90 bp | GCTTTTATGAAACCCCCAAACAATAATGTTAAAGCATCAAGCCGCCTTCTTAGATCTTTCGGGTCATTGTaGGTCAGTAGCTGTATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AFMKPPNNNVKASSRLLRSFGSL*VSSCMS Trigger: TGACATACAGCTACTGACTCACAATGACCCGAAAGA...TCTAAGAAGGCGGCTTGATGCTTTAACATTATTGTTTGGGGGTTTCATAAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR CCA 90 bp | TTTATTATTATATCTAAGTACACTGCAGCTGTCTTCAGACACTCCAGAAGAGTGCCACTGCATGGGACATaGTGCATTCCAAAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIIISKYTAAVFRHSRRVPLHGT*CIPKHL Trigger: CAGATGTTTTGGAATGCACCATGTCCCATGCAGTGG...CACTCTTCTGGAGTGTCTGAAGACAGCTGCAGTGTACTTAGATATAATAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR CCA 90 bp | TCCCCTATAACTGAAATTACAGATATTTGTGAGCTACTATGTTGCTGTGAGAACAAAGGCAGTCAAATCTaGTGGCATCACACAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPITEITDICELLCCCENKGSQI*WHHTAG Trigger: TCCTGCTGTGTGATGCCACCAGATTTGACTGCCTTT...GTTCTCACAGCAACATAGTAGCTCACAAATATCTGTAATTTCAGTTATAGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR GCA 90 bp | TCACAAAATGAACCCATAATTCTACTTCCTTCCATGTTGAGGTTTGATGTCGTTAGCTTCCTGGAAACTTaGCTCAGAGAGCAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQNEPIILLPSMLRFDVVSFLET*LREQFF Trigger: AAAGAACTGCTCTCTGAGGCAAGTTTCCAGGAAGCT...AACGACATCAAACCTCAACATGGAAGGAAGTAGAATTATGGGTTCATTTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR CCA 90 bp | TCACAAAATGAACCCATAATTCTACTTCCTTCCATGTTGAGGTTTGATGTCGTTATCTTCTCCACTGCATaGGACATGGTGCATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQNEPIILLPSMLRFDVVIFSTA*DMVHSK Trigger: TTTGGAATGCACCATGTCCCATGCAGTGGAGAAGAT...AACGACATCAAACCTCAACATGGAAGGAAGTAGAATTATGGGTTCATTTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| 3UTR CAA 72 bp | AAAAGGGCTTCAGACTTTACAGCACATGAACCTAGCTaGAAAGAGACCTTGATCCTTCCGATGTCTAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KRASDFTAHEPS*KETLILPMSKI Trigger: AATTTTAGACATCGGAAGGATCAAGGTCTCTTTCAAGCTAGGTTCATGTGCTGTAAAGTCTGAAGCCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| 3UTR CAA 72 bp | TCACAAAATGAACCCATAATTCTACTTCCTTCCATGTaGAGGTTTGATGTCGTTCACAAACATCTGGATATA | + |
|
Preference number: 4 (lower is better) Translates to: SQNEPIILLPSM*RFDVVHKHLDI Trigger: TATATCCAGATGTTTGTGAACGACATCAAACCTCAACATGGAAGGAAGTAGAATTATGGGTTCATTTTGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR CAA 90 bp | TGTCTTGGCTCCTTATTTCTCTCACTGCCTTTCCCATCCAACCCCATCTTTCCTCGCAGGCGGCCCCAGTaGAGCAGGTTCCCGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLGSLFLSLPFPSNPIFPRRRPQ*SRFPVC Trigger: GCAGACCGGGAACCTGCTCAACTGGGGCCGCCTGCG...AGGAAAGATGGGGTTGGATGGGAAAGGCAGTGAGAGAAATAAGGAGCCAAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGACAACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGTTAAGAGCCGAGCTTCCTGGAAACTaGCCTCAGAGAGCAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPDNSRSVSCGCELELRAELPGN*PQRAVL Trigger: CAGAACTGCTCTCTGAGGCAAGTTTCCAGGAAGCTC...GGCTCTTAACTCCAGCTCACACCCACAGCTCACCGACCTGCTGTTGTCTGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
||
| CDS GCA 90 bp | TCCATCTTCAATCGGAGGCGAAGCCATGATCACAGAGTCCAGCTGTaGAACTCCAAGGACGGAGCATGCCATGTCAACTGCACTTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SIFNRRRSHDHRVQL*NSKDGACHVNCTSS Trigger: ACTAGAAGTGCAGTTGACATGGCATGCTCCGTCCTTGGAGTTGCACAGCTGGACTCTGTGATCATGGCTTCGCCTCCGATTGAAGATGGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029769.14 ENSMUST00000149983.4 ENSMUST00000176445.8 ENSMUST00000178826.8 |
||
| CDS-3UTR CAA 90 bp | AACAGCAGGTCGGTGAGCTGTGGGTGTGAGCTGGAGTTAAGAGCCCCTCCTTTTGTCAGGGATGCTTTCTaGAAGAGCTTCCTGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: NSRSVSCGCELELRAPPFVRDAF*KSFLET Trigger: AGTTTCCAGGAAGCTCTTCAAGAAAGCATCCCTGAC...AAAAGGAGGGGCTCTTAACTCCAGCTCACACCCACAGCTCACCGACCTGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTATAATGTTGGGGATCGACCCCAGGCCATGTGCCTGCTACACAAGCATTGCTCCAACTGTGTCTaGTCTAGATCAGAGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CVYNVGDRPQAMCLLHKHCSNCV*SRSEVP Trigger: AGGCACCTCTGATCTAGACAAGACACAGTTGGAGCA...ATGCTTGTGTAGCAGGCACATGGCCTGGGGTCGATCCCCAACATTATACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTTGGCTCCTTATTTCTCTCACTGCCTTTCCCATCCAACCCCATCTTTCCTTGCTCCAACTGTGTCTaGTCTAGATCAGAGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CLGSLFLSLPFPSNPIFPCSNCV*SRSEVP Trigger: AGGCACCTCTGATCTAGACAAGACACAGTTGGAGCA...AGGAAAGATGGGGTTGGATGGGAAAGGCAGTGAGAGAAATAAGGAGCCAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR CAA 90 bp | TGTCTTGGCTCCTTATTTCTCTCACTGCCTTTCCCATCCAACCCCATCTTTCCTGAGCTTCCTGGAAACTaGCCTCAGAGAGCAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CLGSLFLSLPFPSNPIFPELPGN*PQRAVL Trigger: AAGAACTGCTCTCTGAGGCAAGTTTCCAGGAAGCTC...AGGAAAGATGGGGTTGGATGGGAAAGGCAGTGAGAGAAATAAGGAGCCAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
||
| CDS-3UTR CAA 90 bp | CCTTTTGGCTTGCAGAATGTAGCCTTTAGACTTGATGATTCCCCTGCTCTTCACTGCTCCAACTGTGTCTaGTCTAGATCAGAGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PFGLQNVAFRLDDSPALHCSNCV*SRSEVP Trigger: AGGCACCTCTGATCTAGACAAGACACAGTTGGAGCA...GTGAAGAGCAGGGGAATCATCAAGTCTAAAGGCTACATTCTGCAAGCCAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149983.4 |
||
| CDS TCA 90 bp | CCAAGCCTAGAGATGAAAATGCCAGTCTCACCTTTCGGGTCATTGTaGGTCAGTAGCTGTATGTCAAATTGTTTAGCAAAGGCAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSLEMKMPVSPFGSL*VSSCMSNCLAKAVK Trigger: TTTGACTGCCTTTGCTAAACAATTTGACATACAGCTACTGACTCACAATGACCCGAAAGGTGAGACTGGCATTTTCATCTCTAGGCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGAGAGAGAGGTATGTAGAGGGGTGTGTATGTATTTTGCCTGTGTGTACTTAACTTGGTTACTATaGGGTTTTACCTGTGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: KREREVCRGVCMYFACVYLTWLL*GFTCAH Trigger: GTGGGCACAGGTAAAACCCAATAGTAACCAAGTTAA...GTACACACAGGCAAAATACATACACACCCCTCTACATACCTCTCTCTCTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS GCA 90 bp | AGAAACTTTCATTTCTTCTCTTTCATCGGGATTTATCTTCTCCACTaGATGGGACATGGTGCATTCCAAAACATCTGGAAACTCCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: RNFHFFSFIGIYLLH*MGHGAFQNIWKLPD Trigger: GTCAGGGAGTTTCCAGATGTTTTGGAATGCACCATGTCCCATGCAGTGGAGAAGATAAATCCCGATGAAAGAGAAGAAATGAAAGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029769.14 ENSMUST00000149983.4 ENSMUST00000176445.8 ENSMUST00000178826.8 ENSMUST00000199699.5 |
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| CDS-3UTR CAA 90 bp | ATGTTGAGGTTTGATGTCGTTCACAAACATCTGGATATATCAGCAAAGGAAGGTGTCAGGGATGCTTTCTaGAAGAGCTTCCTGGAAACT | + |
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Preference number: 5 (lower is better) Translates to: MLRFDVVHKHLDISAKEGVRDAF*KSFLET Trigger: AGTTTCCAGGAAGCTCTTCAAGAAAGCATCCCTGAC...ACCTTCCTTTGCTGATATATCCAGATGTTTGTGAACGACATCAAACCTCAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR CAA 90 bp | TCACAAAATGAACCCATAATTCTACTTCCTTCCATGTTGAGGTTTGATGTCGTTGCCCCTCCTTTTGGCTaGCAGAATGTAGCCTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: SQNEPIILLPSMLRFDVVAPPFG*QNVAFR Trigger: TCTAAAGGCTACATTCTGCAAGCCAAAAGGAGGGGC...AACGACATCAAACCTCAACATGGAAGGAAGTAGAATTATGGGTTCATTTTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS CCA 90 bp | ACTTTCATTTCTTCTCTTTCATCGGGATTTATCTTCTCCACTGCATaGGACATGGTGCATTCCAAAACATCTGGAAACTCCCTGACTAAA | + |
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Preference number: 5 (lower is better) Translates to: TFISSLSSGFIFSTA*DMVHSKTSGNSLTK Trigger: TTTAGTCAGGGAGTTTCCAGATGTTTTGGAATGCACCATGTCCCATGCAGTGGAGAAGATAAATCCCGATGAAAGAGAAGAAATGAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029769.14 ENSMUST00000149983.4 ENSMUST00000176445.8 ENSMUST00000178826.8 ENSMUST00000199699.5 |
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| CDS-3UTR CAA 90 bp | TCACAAAATGAACCCATAATTCTACTTCCTTCCATGTTGAGGTTTGATGTCGTTGGAGGCCAGGTTAACTaGGTTACTATTGGGTTTTAC | + |
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Preference number: 5 (lower is better) Translates to: SQNEPIILLPSMLRFDVVGGQVN*VTIGFY Trigger: GTAAAACCCAATAGTAACCAAGTTAACCTGGCCTCC...AACGACATCAAACCTCAACATGGAAGGAAGTAGAATTATGGGTTCATTTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029769.14 |
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| CDS-3UTR CAA 90 bp | TTTAAATTAGCAGTAATATTTCCAGTTAACAGCACTGTACCTTTCTCACAGCACGGAGGCCAGGTTAACTaGGTTACTATTGGGTTTTAC | + |
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Preference number: 5 (lower is better) Translates to: FKLAVIFPVNSTVPFSQHGGQVN*VTIGFY Trigger: GTAAAACCCAATAGTAACCAAGTTAACCTGGCCTCC...GTGCTGTGAGAAAGGTACAGTGCTGTTAACTGGAAATATTACTGCTAATTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
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| CDS GCA 72 bp | TTTCGCAGGCGGCCCCAGTTGAGCAGGTTCCCGGTCTaGAGGTGCAGGGTGCTGGCCCGCGCCAGGAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: FRRRPQLSRFPV*RCRVLARARSA Trigger: GGCGCTCCTGGCGCGGGCCAGCACCCTGCACCTGCAGACCGGGAACCTGCTCAACTGGGGCCGCCTGCGAAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029769.14 ENSMUST00000178826.8 ENSMUST00000199699.5 |
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| CDS GCA 72 bp | AATCGGAGGCGAAGCCATGATCACAGAGTCCAGCTGTaGAACTCCAAGGACGGAGCATGCCATGTCAACTGC | + |
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Preference number: 6 (lower is better) Translates to: NRRRSHDHRVQL*NSKDGACHVNC Trigger: GCAGTTGACATGGCATGCTCCGTCCTTGGAGTTGCACAGCTGGACTCTGTGATCATGGCTTCGCCTCCGATT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029769.14 ENSMUST00000149983.4 ENSMUST00000176445.8 ENSMUST00000178826.8 |
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| CDS CCA 72 bp | GGGCTGATTTGGGAACTCCATTCATTCAAGGTCTTTTaGATACAGTCCCGAAGCTCCTCGCTGTGCGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: GLIWELHSFKVF*IQSRSSSLCVD Trigger: GTCCACGCACAGCGAGGAGCTTCGGGACTGTATCCAAAAGACCTTGAATGAATGGAGTTCCCAAATCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029769.14 ENSMUST00000176445.8 ENSMUST00000178826.8 ENSMUST00000199699.5 |
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| CDS CCA 72 bp | ACATCTGGAAACTCCCTGACTAAATCGGGGCTGATTTaGGAACTCCATTCATTCAAGGTCTTTTGGATACAG | + |
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Preference number: 6 (lower is better) Translates to: TSGNSLTKSGLI*ELHSFKVFWIQ Trigger: CTGTATCCAAAAGACCTTGAATGAATGGAGTTCCCAAATCAGCCCCGATTTAGTCAGGGAGTTTCCAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029769.14 ENSMUST00000176445.8 ENSMUST00000178826.8 ENSMUST00000199699.5 |
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| CDS CCA 72 bp | TCTTCTCTTTCATCGGGATTTATCTTCTCCACTGCATaGGACATGGTGCATTCCAAAACATCTGGAAACTCC | + |
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Preference number: 6 (lower is better) Translates to: SSLSSGFIFSTA*DMVHSKTSGNS Trigger: GGAGTTTCCAGATGTTTTGGAATGCACCATGTCCCATGCAGTGGAGAAGATAAATCCCGATGAAAGAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029769.14 ENSMUST00000149983.4 ENSMUST00000176445.8 ENSMUST00000178826.8 ENSMUST00000199699.5 |
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| CDS TCA 72 bp | AAACTTGCCTCAGAGAGCAGTTCTTTCGGGTCATTGTaGGTCAGTAGCTGTATGTCAAATTGTTTAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KLASESSSFGSL*VSSCMSNCLAK Trigger: CTTTGCTAAACAATTTGACATACAGCTACTGACTCACAATGACCCGAAAGAACTGCTCTCTGAGGCAAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029769.14 ENSMUST00000178826.8 |
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| CDS TCA 72 bp | GAGATGAAAATGCCAGTCTCACCTTTCGGGTCATTGTaGGTCAGTAGCTGTATGTCAAATTGTTTAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: EMKMPVSPFGSL*VSSCMSNCLAK Trigger: CTTTGCTAAACAATTTGACATACAGCTACTGACTCACAATGACCCGAAAGGTGAGACTGGCATTTTCATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176445.8 |
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