Pregenerated sensors for GCKR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059434Ensembl transcript IDs: ENSMUST00000072228.9, ENSMUST00000201166.4, ENSMUST00000201675.3
Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTaGGCTGTTAGTGCCCCACCCACCGGAACTGAGTCTGTCCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: KNGNDPAENRTLPQF*AVSAPPTGTESVLQ Trigger: TTGCAGGACAGACTCAGTTCCGGTGGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| 3UTR-3UTR CCA 90 bp | TTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACCCCCTCAGAAGTGGATaGAGACTTTTCAATGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LFLRSEDASKNGNDPAENPLRSG*RLFNGH Trigger: GTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGG...GTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| 3UTR-3UTR CCA 90 bp | GTTTTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAAGTCCCCTCAGAAGTaGATGGAGACTTTTCAATGG | + |
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Preference number: 2 (lower is better) Translates to: VLFLRSEDASKNGNDPAEKSPQK*METFQW Trigger: CCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTT...CTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| 3UTR CCA 72 bp | AATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTaGGCTGTTAGTGCCCCACCCACCGGAACTGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: NDPAENRTLPQF*AVSAPPTGTES Trigger: AGACTCAGTTCCGGTGGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| 3UTR CCA 72 bp | CCACCGGAACTGAGTCTGTCCTGCAACGTGTATTACTaGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTT | + |
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Preference number: 3 (lower is better) Translates to: PPELSLSCNVYY*HKSPQKWMETF Trigger: AAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAGGACAGACTCAGTTCCGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| 3UTR CCA 72 bp | TGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTaGATGGAGACTTTTCAATGGTCACAGAAACATCAA | + |
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Preference number: 3 (lower is better) Translates to: CNVYYWHKSPQK*METFQWSQKHQ Trigger: TTGATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | ATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCAGCTGGTAGGTGGGCATaGTTTGCCCCTCCTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IQLRTGLFLNSGLLVPHPAGRWA*FAPPPG Trigger: TCCAGGAGGAGGGGCAAATCATGCCCACCTACCAGC...TGGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | ATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACGCTGCGTTTCTGACCTaGCCCAGAGAGGGCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: MIQLRTGLFLNSGLLVPHAAFLT*PREGAP Trigger: AGGAGCGCCCTCTCTGGGCCAGGTCAGAAACGCAGC...GTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCTCCTTCAGCACTTCCTaGACCTTGCCAGCCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: DPAENRTLPQFWAVSAPPSFSTS*TLPATC Trigger: GCAAGTGGCTGGCAAGGTCCAGGAAGTGCTGAAGGA...GGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | ATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCATTCTCGTGGGCAACCTaGACATGGCAGGAGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: IQLRTGLFLNSGLLVPHPFSWAT*TWQEMG Trigger: CCCCATCTCCTGCCATGTCCAGGTTGCCCACGAGAA...TGGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | GGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCTGGATGCTGCGTTTCTaGCCTGGCCCAGAGAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GTSPLRSGWRLFNGHRNIWMLRF*PGPERA Trigger: CGCCCTCTCTGGGCCAGGTCAGAAACGCAGCATCCA...GATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | CCTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCCCATACGACCAGAGGTaGCCCCTCCACTCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: PATCITGTSPLRSGWRLFPYDQR*PLHSAP Trigger: TGGTGCTGAGTGGAGGGGGCACCTCTGGTCGTATGG...GAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCCTTCTGCATCCGCTCTaGCACTTGTCGGAATGTCGA | + |
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Preference number: 4 (lower is better) Translates to: DPAENRTLPQFWAVSAPPLLHPL*HLSECR Trigger: TCGACATTCCGACAAGTGGCAGAGCGGATGCAGAAG...GGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCAGGACTGCCCCACTGTaGTGTGCACCAGGGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GTSPLRSGWRLFNGHRNIRTAPL*CAPGPG Trigger: TCCAGGCCCTGGTGCACAGCACAGTGGGGCAGTCCT...GATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | CAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGTGGGCAACCTGGACATaGCAGGAGATGGGGGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: QRVLLAQVPSEVDGDFSMWATWT*QEMGAA Trigger: CGCGGCCCCCATCTCCTGCCATGTCCAGGTTGCCCA...CATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | CGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCGCTGCGTTTCTGACCTaGCCCAGAGAGGGCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RVLLAQVPSEVDGDFSMVAAFLT*PREGAP Trigger: AGGAGCGCCCTCTCTGGGCCAGGTCAGAAACGCAGC...GACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | ATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCACCCTCCAGAAGAGTTTaGAGTTGGCGATGCGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: IQLRTGLFLNSGLLVPHPPSRRV*SWRCGG Trigger: ACCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGG...TGGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | GGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCCCATGCTCACCGGATTaGAGCCAACCAGGACCGGCA | + |
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Preference number: 4 (lower is better) Translates to: GTSPLRSGWRLFNGHRNIPCSPD*SQPGPA Trigger: TGCCGGTCCTGGTTGGCTTCAATCCGGTGAGCATGG...GATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCACCTTGCCAGCCACTTaGAACATGGTGGTCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: DPAENRTLPQFWAVSAPPTLPAT*NMVVRT Trigger: AGTTCTGACCACCATGTTGCAAGTGGCTGGCAAGGT...GGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCTGCCCCACTGTGCTGTaGACCAGGGCCTGGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: GTSPLRSGWRLFNGHRNICPTVL*TRAWMF Trigger: GAACATCCAGGCCCTGGTGCACAGCACAGTGGGGCA...GATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | CAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGGAGCTGGCAAGGACTaGCCCACTGTGCTGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: QRVLLAQVPSEVDGDFSMGAGKD*PTVLCT Trigger: GGTGCACAGCACAGTGGGGCAGTCCTTGCCAGCTCC...CATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | TACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAAGGACATGGCAGGAGATaGGGGCCGCGCGGACATCAT | + |
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Preference number: 4 (lower is better) Translates to: YWHKSPQKWMETFQWSQKGHGRR*GPRGHH Trigger: ATGATGTCCGCGCGGCCCCCATCTCCTGCCATGTCC...TTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | ATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCATGGTGGTCAGAACTaGCTCACTGTACAGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: MIQLRTGLFLNSGLLVPHHGGQN*LTVQSL Trigger: CAGCGACTGTACAGTGAGTCAGTTCTGACCACCATG...GTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | GATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCTGTCACCCCCTGCAATaGGGTATGTGTAAAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: DPAENRTLPQFWAVSAPPCHPLQ*GMCKEV Trigger: AACCTCTTTACACATACCTCATTGCAGGGGGTGACA...GGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | CCTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAACAACCTCACAGACTaGAGAAGCTGCAGCCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: PATCITGTSPLRSGWRLFNNLTD*RSCSQA Trigger: CGCCTGGCTGCAGCTTCTTCAGTCTGTGAGGTTGTT...GAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | TACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACCATACGACCAGAGGTaGCCCCTCCACTCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: YWHKSPQKWMETFQWSQKPYDQR*PLHSAP Trigger: TGGTGCTGAGTGGAGGGGGCACCTCTGGTCGTATGG...TTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | ATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCACACAGACATAAGGAATaGCATACGACCAGAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: IQLRTGLFLNSGLLVPHPHRHKE*HTTRGA Trigger: GGCACCTCTGGTCGTATGGCATTCCTTATGTCTGTG...TGGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCGTAGTCCATCTGGCCTaGCACAAAGGGCGCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GTSPLRSGWRLFNGHRNIVVHLA*HKGRRE Trigger: CTCTCTGCGCCCTTTGTGGCAGGCCAGATGGACTAC...GATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | ATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCATTCTCCTGCATCTTCTaGATCCGCTCTGCCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: IQLRTGLFLNSGLLVPHPFSCIF*IRSATC Trigger: ACAAGTGGCAGAGCGGATGCAGAAGATGCAGGAGAA...TGGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | CAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGTGCCCCACTGTGCTGTaGACCAGGGCCTGGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: QRVLLAQVPSEVDGDFSMCPTVL*TRAWMF Trigger: GAACATCCAGGCCCTGGTGCACAGCACAGTGGGGCA...CATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGGAGCTGGCAAGGACTaGCCCACTGTGCTGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: ASKNGNDPAENRTLPQFWGAGKD*PTVLCT Trigger: GGTGCACAGCACAGTGGGGCAGTCCTTGCCAGCTCC...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | CCTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCCTCCAAAGGCTTGGATaGTGCGTTTCTGACCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PATCITGTSPLRSGWRLFLQRLG*CVSDLA Trigger: GGCCAGGTCAGAAACGCAGCATCCAAGCCTTTGGAG...GAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATGGGCAACCTGGACATaGCAGGAGATGGGGGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: EDASKNGNDPAENRTLPQWATWT*QEMGAA Trigger: CGCGGCCCCCATCTCCTGCCATGTCCAGGTTGCCCA...TTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCTTCTCGTGGGCAACCTaGACATGGCAGGAGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: GTSPLRSGWRLFNGHRNIFSWAT*TWQEMG Trigger: CCCCATCTCCTGCCATGTCCAGGTTGCCCACGAGAA...GATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | CACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCAAGCTGGTAGGTGGGCATaGTTTGCCCCTCCTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HKSPQKWMETFQWSQKHQAGRWA*FAPPPG Trigger: TCCAGGAGGAGGGGCAAATCATGCCCACCTACCAGC...TTGATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | CTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCACATCCTGAGAGAAGGTaGACTGGGGACCCTGATTGC | + |
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Preference number: 4 (lower is better) Translates to: LQRVLLAQVPSEVDGDFSHPERR*TGDPDC Trigger: GCAATCAGGGTCCCCAGTTCACCTTCTCTCAGGATG...TGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | AAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTATGGATGCTGCGTTTCTaGCCTGGCCCAGAGAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: KMEMIQLRTGLFLNSGLLWMLRF*PGPERA Trigger: CGCCCTCTCTGGGCCAGGTCAGAAACGCAGCATCCA...TAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | AAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAAGGACTGCCCCACTGTaGTGTGCACCAGGGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KMEMIQLRTGLFLNSGLLRTAPL*CAPGPG Trigger: TCCAGGCCCTGGTGCACAGCACAGTGGGGCAGTCCT...TAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | CTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCACAAAGGCTTGGATGCTaGGTTTCTGACCTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LQRVLLAQVPSEVDGDFSQRLGC*VSDLAQ Trigger: CTGGGCCAGGTCAGAAACGCAGCATCCAAGCCTTTG...TGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCCTCCAAAGGCTTGGATaGTGCGTTTCTGACCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GTSPLRSGWRLFNGHRNILQRLG*CVSDLA Trigger: GGCCAGGTCAGAAACGCAGCATCCAAGCCTTTGGAG...GATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGCACCAGGCCCCCATCTaGCTCCTTCAGCACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: VKMEMIQLRTGLFLNSGLHQAPI*LLQHFL Trigger: CAGGAAGTGCTGAAGGAGCCAGATGGGGGCCTGGTG...CAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | CCTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCGGTTGGACTTCTCTGTaGTTGGCACAGCTGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PATCITGTSPLRSGWRLFGWTSL*LAQLLH Trigger: ATGAAGCAGCTGTGCCAATCACAGAGAAGTCCAACC...GAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | GAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAACCATGCTCACCGGATTaGAGCCAACCAGGACCGGCA | + |
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Preference number: 4 (lower is better) Translates to: EDASKNGNDPAENRTLPQPCSPD*SQPGPA Trigger: TGCCGGTCCTGGTTGGCTTCAATCCGGTGAGCATGG...TTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | GTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCAGTGAACTGGGGACCCTaGTTGCTGAGCTCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VYYWHKSPQKWMETFQWSVNWGP*LLSSSF Trigger: GAAGGATGAGCTCAGCAATCAGGGTCCCCAGTTCAC...TGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR TCA 90 bp | GATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCGGGAAATGTATCACTTaGAGAAGACTCTCAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPAENRTLPQFWAVSAPPGKCIT*RRLSMQ Trigger: CTGCATTGAGAGTCTTCTTCAAGTGATACATTTCCC...GGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR GCA 90 bp | GATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCAATTTTCTCTGCATCTaGTTTGTCCAAGTTCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DPAENRTLPQFWAVSAPPNFLCI*FVQVPG Trigger: ACCCGGAACTTGGACAAAGCAGATGCAGAGAAAATT...GGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR GCA 90 bp | ATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACAGACCTGTCACCCCCTaGAATGAGGTATGTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MIQLRTGLFLNSGLLVPHRPVTP*NEVCVK Trigger: CTTTACACATACCTCATTGCAGGGGGTGACAGGTCT...GTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR GCA 90 bp | CCTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCCAGCTGTGTTATCCATaGAGTAGTCCATCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PATCITGTSPLRSGWRLFQLCYP*SSPSGL Trigger: CAGGCCAGATGGACTACTGCATGGATAACACAGCTG...GAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | CCTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCCAAGTTCCGGGTCAGTaGGTTGGACTTCTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PATCITGTSPLRSGWRLFQVPGQ*VGLLCD Trigger: ATCACAGAGAAGTCCAACCCACTGACCCGGAACTTG...GAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCGAGGACACAACACCCTaGTCCACAGTCTTATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSPLRSGWRLFNGHRNIEDTTP*STVLWA Trigger: AGCCCATAAGACTGTGGACCAGGGTGTTGTGTCCTC...GATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | TACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACGGAGGTCCAGCATGTaGTTCTGTAGGATCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YWHKSPQKWMETFQWSQKRRSSM*FCRIFP Trigger: GGGGAAGATCCTACAGAACCACATGCTGGACCTCCG...TTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS-3UTR TCA 90 bp | CAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGCATGGTGGTCAGAACTaGCTCACTGTACAGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRVLLAQVPSEVDGDFSMHGGQN*LTVQSL Trigger: CAGCGACTGTACAGTGAGTCAGTTCTGACCACCATG...CATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR TCA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCCCGATGGCAGGATTaGGCACAAAGGCTTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASKNGNDPAENRTLPQFWARWQD*AQRLPV Trigger: AACAGGAAGCCTTTGTGCTCAATCCTGCCATCGGGC...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR TCA 90 bp | TTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAGTCAGGAAGTCATCCTaGGAGAAGGTGAACTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLAQVPSEVDGDFSMVTEVRKSS*EKVNWG Trigger: TCCCCAGTTCACCTTCTCTCAGGATGACTTCCTGAC...TTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGTCCTTCAGCACTTCCTaGACCTTGCCAGCCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASKNGNDPAENRTLPQFWSFSTS*TLPATC Trigger: GCAAGTGGCTGGCAAGGTCCAGGAAGTGCTGAAGGA...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | CACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCAACTGTGCACCAGGGCCTaGATGTTCCAACTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKSPQKWMETFQWSQKHQLCTRA*MFQLFS Trigger: GGAGAAGAGTTGGAACATCCAGGCCCTGGTGCACAG...TTGATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGCTGTGCACCAGGGCCTaGATGTTCCAACTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKMEMIQLRTGLFLNSGLLCTRA*MFQLFS Trigger: GGAGAAGAGTTGGAACATCCAGGCCCTGGTGCACAG...CAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | TACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAAACCTTTTCCTTCTCGTaGGCAACCTGGACATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YWHKSPQKWMETFQWSQKTFSFS*ATWTWQ Trigger: CTGCCATGTCCAGGTTGCCCACGAGAAGGAAAAGGT...TTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR TCA 90 bp | AAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGCCCGATGGCAGGATTaGGCACAAAGGCTTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KMEMIQLRTGLFLNSGLLARWQD*AQRLPV Trigger: AACAGGAAGCCTTTGTGCTCAATCCTGCCATCGGGC...TAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR TCA 90 bp | GAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAAGTGAACTGGGGACCCTaGTTGCTGAGCTCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDASKNGNDPAENRTLPQVNWGP*LLSSSF Trigger: GAAGGATGAGCTCAGCAATCAGGGTCCCCAGTTCAC...TTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | ATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACAATTTTCTCTGCATCTaGTTTGTCCAAGTTCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MIQLRTGLFLNSGLLVPHNFLCI*FVQVPG Trigger: ACCCGGAACTTGGACAAAGCAGATGCAGAGAAAATT...GTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR GCA 90 bp | GATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCGCACTTCCTGGACCTTaGCAGCCACTTGCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: DQKMPVKMEMIQLRTGLFALPGP*QPLATW Trigger: CCATGTTGCAAGTGGCTGGCAAGGTCCAGGAAGTGC...GAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR GCA 90 bp | CGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCAGACCTGTCACCCCCTaGAATGAGGTATGTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVLLAQVPSEVDGDFSMVRPVTP*NEVCVK Trigger: CTTTACACATACCTCATTGCAGGGGGTGACAGGTCT...GACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR GCA 90 bp | CAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGCAGCTGTGTTATCCATaGAGTAGTCCATCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRVLLAQVPSEVDGDFSMQLCYP*SSPSGL Trigger: CAGGCCAGATGGACTACTGCATGGATAACACAGCTG...CATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGCTTCTGCATCCGCTCTaGCACTTGTCGGAATGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASKNGNDPAENRTLPQFWLLHPL*HLSECR Trigger: TCGACATTCCGACAAGTGGCAGAGCGGATGCAGAAG...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCAGCTTCCTGTTTCTCCTaGATCTTCTGCATCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VYYWHKSPQKWMETFQWSASCFS*IFCIRS Trigger: AGAGCGGATGCAGAAGATGCAGGAGAAACAGGAAGC...TGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | AGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTCAAAGGCTTGGATGCTaGGTTTCTGACCTGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKNGNDPAENRTLPQFWAQRLGC*VSDLAQ Trigger: CTGGGCCAGGTCAGAAACGCAGCATCCAAGCCTTTG...AGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | CCTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCATCTCCAGTCTTCAATaGGATCATTTCTGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PATCITGTSPLRSGWRLFISSLQ*DHFWPC Trigger: GCATGGCCAGAAATGATCCCATTGAAGACTGGAGAT...GAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | CACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCAAACCTTTTCCTTCTCGTaGGCAACCTGGACATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKSPQKWMETFQWSQKHQTFSFS*ATWTWQ Trigger: CTGCCATGTCCAGGTTGCCCACGAGAAGGAAAAGGT...TTGATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGCACAGACATAAGGAATaGCATACGACCAGAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKMEMIQLRTGLFLNSGLHRHKE*HTTRGA Trigger: GGCACCTCTGGTCGTATGGCATTCCTTATGTCTGTG...CAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | CACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCAAGCTTCCTGTTTCTCCTaGATCTTCTGCATCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKSPQKWMETFQWSQKHQASCFS*IFCIRS Trigger: AGAGCGGATGCAGAAGATGCAGGAGAAACAGGAAGC...TTGATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | TTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAATCAACACCCACTTGGTaGTTAACTCACGCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLAQVPSEVDGDFSMVTESTPTW*LTHAGT Trigger: AGTTCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGA...TTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGAAGAAGACTCTCAATaGAGCGAGCCTTGGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASKNGNDPAENRTLPQFWEEDSQ*SEPWTV Trigger: GACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTC...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGCAAGTTCCGGGTCAGTaGGTTGGACTTCTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASKNGNDPAENRTLPQFWQVPGQ*VGLLCD Trigger: ATCACAGAGAAGTCCAACCCACTGACCCGGAACTTG...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCAATTTGCCCCTCCTCCTaGAATATCTCAGCATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VYYWHKSPQKWMETFQWSICPSS*NISASH Trigger: GTGTGATGCTGAGATATTCCAGGAGGAGGGGCAAAT...TGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GTTTTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGCACCAGGCCCCCATCTaGCTCCTTCAGCACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLFLRSEDASKNGNDPAEHQAPI*LLQHFL Trigger: CAGGAAGTGCTGAAGGAGCCAGATGGGGGCCTGGTG...CTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGTGGTCCACAGTCTTATaGGCTGCTAGTAGCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASKNGNDPAENRTLPQFWWSTVL*AASSRV Trigger: AACCCTGCTACTAGCAGCCCATAAGACTGTGGACCA...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCGAGGACACAACACCCTaGTCCACAGTCTTATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQKMPVKMEMIQLRTGLFEDTTP*STVLWA Trigger: AGCCCATAAGACTGTGGACCAGGGTGTTGTGTCCTC...GAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | CAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGTCAGCACCAAAAGTGTaGATACACTCTACCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QRVLLAQVPSEVDGDFSMSAPKV*IHSTPS Trigger: GGATGGGGTAGAGTGTATCCACACTTTTGGTGCTGA...CATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR TCA 90 bp | CACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCAACACTGCCCCAGCAGTTaGACAATTTTCTCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HKSPQKWMETFQWSQKHQHCPSS*TIFSAS Trigger: AGATGCAGAGAAAATTGTTCAACTGCTGGGGCAGTG...TTGATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR GCA 90 bp | TTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACGTAGTCCATCTGGCCTaGCACAAAGGGCGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLRSEDASKNGNDPAENVVHLA*HKGRRE Trigger: CTCTCTGCGCCCTTTGTGGCAGGCCAGATGGACTAC...GTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR GCA 90 bp | AGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTTTCTCCTGCATCTTCTaGATCCGCTCTGCCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKNGNDPAENRTLPQFWAFSCIF*IRSATC Trigger: ACAAGTGGCAGAGCGGATGCAGAAGATGCAGGAGAA...AGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR GCA 90 bp | GTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTCAACACCCACTTGGTaGTTAACTCACGCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VKMEMIQLRTGLFLNSGLSTPTW*LTHAGT Trigger: AGTTCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGA...CAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR GCA 90 bp | GATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCGAAGAAGACTCTCAATaGAGCGAGCCTTGGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DQKMPVKMEMIQLRTGLFEEDSQ*SEPWTV Trigger: GACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTC...GAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGCCAGTAGAATCTTGGTaGCGCTTCCACCTTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: ASKNGNDPAENRTLPQFWPVESW*RFHLSF Trigger: GAATGAAAGGTGGAAGCGCCACCAAGATTCTACTGG...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | AGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTTGGTCCACAGTCTTATaGGCTGCTAGTAGCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKNGNDPAENRTLPQFWAWSTVL*AASSRV Trigger: AACCCTGCTACTAGCAGCCCATAAGACTGTGGACCA...AGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTCAGCACCAAAAGTGTaGATACACTCTACCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VKMEMIQLRTGLFLNSGLSAPKV*IHSTPS Trigger: GGATGGGGTAGAGTGTATCCACACTTTTGGTGCTGA...CAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | CGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCCTGAGCTCATCCTTCTaGTTAAACATGTCATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLLAQVPSEVDGDFSMVLSSSF*LNMSLW Trigger: CCACAATGACATGTTTAACCAGAAGGATGAGCTCAG...GACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | CTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAAATTTCCGTAAGGGATaGCAGAACAGAAGTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQRVLLAQVPSEVDGDFSNFRKG*QNRSQE Trigger: TTCCTGACTTCTGTTCTGCCATCCCTTACGGAAATT...TGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | AGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGACTCAGCAAGGCTGTaGGGATCACCTTTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKNGNDPAENRTLPQFWADSARL*GSPFPS Trigger: AGAAGGAAAAGGTGATCCCCACAGCCTTGCTGAGTC...AGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | AGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTCACTGCCCCAGCAGTTaGACAATTTTCTCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SKNGNDPAENRTLPQFWAHCPSS*TIFSAS Trigger: AGATGCAGAGAAAATTGTTCAACTGCTGGGGCAGTG...AGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | AGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTTGTCACCCCCTGCAATaGGGTATGTGTAAAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKNGNDPAENRTLPQFWACHPLQ*GMCKEV Trigger: AACCTCTTTACACATACCTCATTGCAGGGGGTGACA...AGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | TTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACCATCCTGAGAGAAGGTaGACTGGGGACCCTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFLRSEDASKNGNDPAENHPERR*TGDPDC Trigger: GCAATCAGGGTCCCCAGTTCACCTTCTCTCAGGATG...GTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR TCA 90 bp | GTTTTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAACCTCACAGACTaGAGAAGCTGCAGCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLFLRSEDASKNGNDPAENNLTD*RSCSQA Trigger: CGCCTGGCTGCAGCTTCTTCAGTCTGTGAGGTTGTT...CTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAAATTTGCCCCTCCTCCTaGAATATCTCAGCATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: EDASKNGNDPAENRTLPQICPSS*NISASH Trigger: GTGTGATGCTGAGATATTCCAGGAGGAGGGGCAAAT...TTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAACCACTTGCAACATGGTaGTCAGAACTGACTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EDASKNGNDPAENRTLPQPLATW*SELTHC Trigger: ACAGTGAGTCAGTTCTGACCACCATGTTGCAAGTGG...TTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCCAGTAGAATCTTGGTaGCGCTTCCACCTTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: DQKMPVKMEMIQLRTGLFPVESW*RFHLSF Trigger: GAATGAAAGGTGGAAGCGCCACCAAGATTCTACTGG...GAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTTCCAGTAGAATCTTaGTGGCGCTTCCACCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKMEMIQLRTGLFLNSGLFPVES*WRFHLS Trigger: TGAAAGGTGGAAGCGCCACCAAGATTCTACTGGAAA...CAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACTGAGCTCATCCTTCTaGTTAAACATGTCATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VYYWHKSPQKWMETFQWSLSSSF*LNMSLW Trigger: CCACAATGACATGTTTAACCAGAAGGATGAGCTCAG...TGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGTATTCAACACCCACTTaGTGCTTAACTCACGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASKNGNDPAENRTLPQFWYSTPT*CLTHAG Trigger: TCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGAATA...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR TCA 90 bp | TTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACGTCAGGAAGTCATCCTaGGAGAAGGTGAACTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFLRSEDASKNGNDPAENVRKSS*EKVNWG Trigger: TCCCCAGTTCACCTTCTCTCAGGATGACTTCCTGAC...GTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR TCA 90 bp | CACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCAAGGGAAATGTATCACTTaGAGAAGACTCTCAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKSPQKWMETFQWSQKHQGKCIT*RRLSMQ Trigger: CTGCATTGAGAGTCTTCTTCAAGTGATACATTTCCC...TTGATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | GTTTTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGCTGCAACATGGCCAGTaGCCTCCAGAAGAGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLFLRSEDASKNGNDPAELQHGQ*PPEEFG Trigger: TCCAAACTCTTCTGGAGGGCACTGGCCATGTTGCAG...CTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAAATCTCCAGTCTTCAATaGGATCATTTCTGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: EDASKNGNDPAENRTLPQISSLQ*DHFWPC Trigger: GCATGGCCAGAAATGATCCCATTGAAGACTGGAGAT...TTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CCA 90 bp | GATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCTTTCCAGTAGAATCTTaGTGGCGCTTCCACCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DQKMPVKMEMIQLRTGLFFPVES*WRFHLS Trigger: TGAAAGGTGGAAGCGCCACCAAGATTCTACTGGAAA...GAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCTATTCAACACCCACTTaGTGCTTAACTCACGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DQKMPVKMEMIQLRTGLFYSTPT*CLTHAG Trigger: TCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGAATA...GAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | CTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCATTGAACAATTTTCTCTaGATCTGCTTTGTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LQRVLLAQVPSEVDGDFSLNNFL*ICFVQV Trigger: AACTTGGACAAAGCAGATGCAGAGAAAATTGTTCAA...TGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | CACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCAAAGACCTTTCATCAGCTaGTTGAAAGACACAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: HKSPQKWMETFQWSQKHQRPFIS*LKDTDI Trigger: TATGTCTGTGTCTTTCAACCAGCTGATGAAAGGTCT...TTGATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | TTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACGACTCAGCAAGGCTGTaGGGATCACCTTTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLRSEDASKNGNDPAENDSARL*GSPFPS Trigger: AGAAGGAAAAGGTGATCCCCACAGCCTTGCTGAGTC...GTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGTCAGAGTGGCAATTTTaGAACTTTGACTGTAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ASKNGNDPAENRTLPQFWSEWQF*NFDCRL Trigger: TAACCTACAGTCAAAGTTCCAAAATTGCCACTCTGA...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR GCA 90 bp | AGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTTTGAACAATTTTCTCTaGATCTGCTTTGTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKNGNDPAENRTLPQFWALNNFL*ICFVQV Trigger: AACTTGGACAAAGCAGATGCAGAGAAAATTGTTCAA...AGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | GTTTTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAGACCTTTCATCAGCTaGTTGAAAGACACAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: VLFLRSEDASKNGNDPAERPFIS*LKDTDI Trigger: TATGTCTGTGTCTTTCAACCAGCTGATGAAAGGTCT...CTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CCA 90 bp | TTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACTCAGAGTGGCAATTTTaGAACTTTGACTGTAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFLRSEDASKNGNDPAENSEWQF*NFDCRL Trigger: TAACCTACAGTCAAAGTTCCAAAATTGCCACTCTGA...GTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CCA 90 bp | GCCCTCCAGAAGAGTTTGGAGTTGGCGATGCGGAGGTCCAGCATGTaGTTCTGTAGGATCTTCCCCAGCAGCACATGGGCCCCAGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: ALQKSLELAMRRSSM*FCRIFPSSTWAPVL Trigger: GAGTACTGGGGCCCATGTGCTGCTGGGGAAGATCCTACAGAACCACATGCTGGACCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS GCA 90 bp | AGGGAAAGAGCTTCTTTAGAGGAGCTGGCAAGGACTGCCCCACTGTaGTGTGCACCAGGGCCTGGATGTTCCAACTCTTCTCCCTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RERASLEELARTAPL*CAPGPGCSNSSPSP Trigger: GGGTGAGGGAGAAGAGTTGGAACATCCAGGCCCTGGTGCACAGCACAGTGGGGCAGTCCTTGCCAGCTCCTCTAAAGAAGCTCTTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CCA 90 bp | GGATCACCTTTTCCTTCTCGTGGGCAACCTGGACATGGCAGGAGATaGGGGCCGCGCGGACATCATTCGACAGCGGTTGAGGGAAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: GSPFPSRGQPGHGRR*GPRGHHSTAVEGNV Trigger: TACATTTCCCTCAACCGCTGTCGAATGATGTCCGCGCGGCCCCCATCTCCTGCCATGTCCAGGTTGCCCACGAGAAGGAAAAGGTGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS TCA 90 bp | TTTCTGACCTGGCCCAGAGAGGGCGCTCCTAACAACCTCACAGACTaGAGAAGCTGCAGCCAGGCGTTCCTTAGCCTCAGTGATGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLTWPREGAPNNLTD*RSCSQAFLSLSDGA Trigger: TGCTCCATCACTGAGGCTAAGGAACGCCTGGCTGCAGCTTCTTCAGTCTGTGAGGTTGTTAGGAGCGCCCTCTCTGGGCCAGGTCAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 90 bp | TCTGCAACATGGCCAGTGCCCTCCAGAAGAGTTTGGAGTTGGCGATaGGGAGGTCCAGCATGTGGTTCTGTAGGATCTTCCCCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SATWPVPSRRVWSWR*GGPACGSVGSSPAA Trigger: TGCTGCTGGGGAAGATCCTACAGAACCACATGCTGGACCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGGCACTGGCCATGTTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS CCA 90 bp | CTGGCTCCTTCAGCACTTCCTGGACCTTGCCAGCCACTTGCAACATaGTGGTCAGAACTGACTCACTGTACAGTCGCTGGTAGGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LAPSALPGPCQPLAT*WSELTHCTVAGRWA Trigger: TGCCCACCTACCAGCGACTGTACAGTGAGTCAGTTCTGACCACCATGTTGCAAGTGGCTGGCAAGGTCCAGGAAGTGCTGAAGGAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS TCA 90 bp | CAGTGGGTTGGACTTCTCTGTGATTGGCACAGCTGCTTCATACCCTaGCAACTCCCATTCCCCAGGCTCAGGGGTCTCGATCACATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QWVGLLCDWHSCFIP*QLPFPRLRGLDHML Trigger: CAGCATGTGATCGAGACCCCTGAGCCTGGGGAATGGGAGTTGTCAGGGTATGAAGCAGCTGTGCCAATCACAGAGAAGTCCAACCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
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| CDS TCA 90 bp | CACTTCCTGGACCTTGCCAGCCACTTGCAACATGGTGGTCAGAACTaGCTCACTGTACAGTCGCTGGTAGGTGGGCATGATTTGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HFLDLASHLQHGGQN*LTVQSLVGGHDLPL Trigger: GAGGGGCAAATCATGCCCACCTACCAGCGACTGTACAGTGAGTCAGTTCTGACCACCATGTTGCAAGTGGCTGGCAAGGTCCAGGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CCA 90 bp | AGAACCTCTGCAACATGGCCAGTGCCCTCCAGAAGAGTTTGGAGTTaGCGATGCGGAGGTCCAGCATGTGGTTCTGTAGGATCTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RTSATWPVPSRRVWS*RCGGPACGSVGSSP Trigger: TGGGGAAGATCCTACAGAACCACATGCTGGACCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGGCACTGGCCATGTTGCAGAGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS CCA 90 bp | GTCCTGAGAACCTCTGCAACATGGCCAGTGCCCTCCAGAAGAGTTTaGAGTTGGCGATGCGGAGGTCCAGCATGTGGTTCTGTAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: VLRTSATWPVPSRRV*SWRCGGPACGSVGS Trigger: AGATCCTACAGAACCACATGCTGGACCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGGCACTGGCCATGTTGCAGAGGTTCTCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | GATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCCATCCGCTCTGCCACTaGTCGGAATGTCGATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DPAENRTLPQFWAVSAPPHPLCH*SECRSP Trigger: TGGAGATCGACATTCCGACAAGTGGCAGAGCGGATG...GGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS TCA 90 bp | TGGTGGTCAGAACTGACTCACTGTACAGTCGCTGGTAGGTGGGCATaGTTTGCCCCTCCTCCTGGAATATCTCAGCATCACACTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WWSELTHCTVAGRWA*FAPPPGISQHHTAP Trigger: TGGGGCAGTGTGATGCTGAGATATTCCAGGAGGAGGGGCAAATCATGCCCACCTACCAGCGACTGTACAGTGAGTCAGTTCTGACCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS GCA 90 bp | CGGCAAGAAGACAGCTGTGTTATCCATGCAGTAGTCCATCTGGCCTaGCACAAAGGGCGCAGAGAGTCCCACGGAAATGCCTATAACGAC | + |
|
Preference number: 5 (lower is better) Translates to: RQEDSCVIHAVVHLA*HKGRRESHGNAYND Trigger: GTCGTTATAGGCATTTCCGTGGGACTCTCTGCGCCCTTTGTGGCAGGCCAGATGGACTACTGCATGGATAACACAGCTGTCTTCTTGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS GCA 90 bp | AGAAGACTCTCAATGCAGCGAGCCTTGGACTGTCCTGAGAACCTCTaGAACATGGCCAGTGCCCTCCAGAAGAGTTTGGAGTTGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: RRLSMQRALDCPENL*NMASALQKSLELAM Trigger: CATCGCCAACTCCAAACTCTTCTGGAGGGCACTGGCCATGTTGCAGAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | ATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCAGACCTTGCCAGCCACTaGCAACATGGTGGTCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IQLRTGLFLNSGLLVPHPDLASH*QHGGQN Trigger: GTTCTGACCACCATGTTGCAAGTGGCTGGCAAGGTC...TGGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS TCA 90 bp | CATCTGCTTTGTCCAAGTTCCGGGTCAGTGGGTTGGACTTCTCTGTaGTTGGCACAGCTGCTTCATACCCTGACAACTCCCATTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLLCPSSGSVGWTSL*LAQLLHTLTTPIPQ Trigger: CTGGGGAATGGGAGTTGTCAGGGTATGAAGCAGCTGTGCCAATCACAGAGAAGTCCAACCCACTGACCCGGAACTTGGACAAAGCAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
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| CDS-3UTR CAA 90 bp | ATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACTCAATGCAGCGAGCCTaGGACTGTCCTGAGAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: MIQLRTGLFLNSGLLVPHSMQRA*DCPENL Trigger: GAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGA...GTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS CCA 90 bp | CCAGCAGCACATGGGCCCCAGTACTCACTGTATTCAACACCCACTTaGTGCTTAACTCACGCTGGAACTTCTGAACGTAGCTCCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PAAHGPQYSLYSTPT*CLTHAGTSERSSLH Trigger: ATGAAGGGAGCTACGTTCAGAAGTTCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGAATACAGTGAGTACTGGGGCCCATGTGCTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS CCA 90 bp | GAGGGAAATGTATCACTTGAAGAAGACTCTCAATGCAGCGAGCCTTaGACTGTCCTGAGAACCTCTGCAACATGGCCAGTGCCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EGNVSLEEDSQCSEP*TVLRTSATWPVPSR Trigger: TCTGGAGGGCACTGGCCATGTTGCAGAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTCAAGTGATACATTTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS TCA 90 bp | CTGTCCGTTCCCGAGAGGCTACAACAGACCTGTCACCCCCTGCAATaGGGTATGTGTAAAGAGGTTTTTGTCCCAGACCTTTCATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSVPERLQQTCHPLQ*GMCKEVFVPDLSSA Trigger: AGCTGATGAAAGGTCTGGGACAAAAACCTCTTTACACATACCTCATTGCAGGGGGTGACAGGTCTGTTGTAGCCTCTCGGGAACGGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS TCA 90 bp | TATCACTTGAAGAAGACTCTCAATGCAGCGAGCCTTGGACTGTCCTaGGAACCTCTGCAACATGGCCAGTGCCCTCCAGAAGAGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YHLKKTLNAASLGLS*EPLQHGQCPPEEFG Trigger: TCCAAACTCTTCTGGAGGGCACTGGCCATGTTGCAGAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTCAAGTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS GCA 90 bp | TCGACAGCGGTTGAGGGAAATGTATCACTTGAAGAAGACTCTCAATaGAGCGAGCCTTGGACTGTCCTGAGAACCTCTGCAACATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: STAVEGNVSLEEDSQ*SEPWTVLRTSATWP Trigger: TGGCCATGTTGCAGAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTCAAGTGATACATTTCCCTCAACCGCTGTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | GATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCCCTTTCATCAGCTGGTaGAAAGACACAGACATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DPAENRTLPQFWAVSAPPPFISW*KDTDIR Trigger: CCTTATGTCTGTGTCTTTCAACCAGCTGATGAAAGG...GGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | CAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGGCCCGATGGCAGGATaGAGCACAAAGGCTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QRVLLAQVPSEVDGDFSMGPMAG*STKASC Trigger: ACAGGAAGCCTTTGTGCTCAATCCTGCCATCGGGCC...CATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | TTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAGGCCCGATGGCAGGATaGAGCACAAAGGCTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLAQVPSEVDGDFSMVTEGPMAG*STKASC Trigger: ACAGGAAGCCTTTGTGCTCAATCCTGCCATCGGGCC...TTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCCCTCCAGAAGAGTTaGGAGTTGGCGATGCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASKNGNDPAENRTLPQFWALQKS*ELAMRR Trigger: CCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGGC...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS GCA 90 bp | CTCAGCATCACACTGCCCCAGCAGTTGAACAATTTTCTCTGCATCTaGTTTGTCCAAGTTCCGGGTCAGTGGGTTGGACTTCTCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSITLPQQLNNFLCI*FVQVPGQWVGLLCD Trigger: ATCACAGAGAAGTCCAACCCACTGACCCGGAACTTGGACAAAGCAGATGCAGAGAAAATTGTTCAACTGCTGGGGCAGTGTGATGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
||
| CDS GCA 90 bp | GAGCACAAAGGCTTCCTGTTTCTCCTGCATCTTCTGCATCCGCTCTaGCACTTGTCGGAATGTCGATCTCCAGTCTTCAATGGGATCATT | + |
|
Preference number: 5 (lower is better) Translates to: EHKGFLFLLHLLHPL*HLSECRSPVFNGII Trigger: AATGATCCCATTGAAGACTGGAGATCGACATTCCGACAAGTGGCAGAGCGGATGCAGAAGATGCAGGAGAAACAGGAAGCCTTTGTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS GCA 90 bp | GCAGCACATGGGCCCCAGTACTCACTGTATTCAACACCCACTTGGTaGTTAACTCACGCTGGAACTTCTGAACGTAGCTCCCTTCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: AAHGPQYSLYSTPTW*LTHAGTSERSSLHN Trigger: ATTATGAAGGGAGCTACGTTCAGAAGTTCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGAATACAGTGAGTACTGGGGCCCATGTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS CCA 90 bp | AGCGAGCCTTGGACTGTCCTGAGAACCTTGTATTCAACACCCACTTaGTGCTTAACTCACGCTGGAACTTCTGAACGTAGCTCCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SEPWTVLRTLYSTPT*CLTHAGTSERSSLH Trigger: ATGAAGGGAGCTACGTTCAGAAGTTCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGAATACAAGGTTCTCAGGACAGTCCAAGGCTCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072228.9 |
||
| CDS-3UTR CAA 90 bp | TTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAAGCACTTCCTGGACCTaGCCAGCCACTTGCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: LLAQVPSEVDGDFSMVTESTSWT*PATCNM Trigger: CATGTTGCAAGTGGCTGGCAAGGTCCAGGAAGTGCT...TTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | GATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTAGTGCCCCACCCGGCAATTTTGGAACTTaGACTGTAGGTTACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: DPAENRTLPQFWAVSAPPGNFGT*TVGYLM Trigger: CATCAGGTAACCTACAGTCAAAGTTCCAAAATTGCC...GGGTGGGGCACTAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 90 bp | GAATATCTCAGCATCACACTGCCCCAGCAGTTGAACAATTTTCTCTaGATCTGCTTTGTCCAAGTTCCGGGTCAGTGGGTTGGACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EYLSITLPQQLNNFL*ICFVQVPGQWVGLL Trigger: GAGAAGTCCAACCCACTGACCCGGAACTTGGACAAAGCAGATGCAGAGAAAATTGTTCAACTGCTGGGGCAGTGTGATGCTGAGATATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
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| CDS GCA 90 bp | GTTCCAACTCTTCTCCCTCACCCTTTCTGCCAGGGCCTGTACTTCTaGGAGGTTATCATCCAGGGTAAAAATGAAGACCACAGTGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VPTLLPHPFCQGLYF*EVIIQGKNEDHSVN Trigger: ATTGACACTGTGGTCTTCATTTTTACCCTGGATGATAACCTCGCAGAAGTACAGGCCCTGGCAGAAAGGGTGAGGGAGAAGAGTTGGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS GCA 90 bp | TCGACAGCGGTTGAGGGAAATGTATCACTTGAAGAAGACTCTCAATaGAGCGAGCCTTGGACTGTCCTGAGAACCTTGTATTCAACACCC | + |
|
Preference number: 5 (lower is better) Translates to: STAVEGNVSLEEDSQ*SEPWTVLRTLYSTP Trigger: GGGTGTTGAATACAAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTCAAGTGATACATTTCCCTCAACCGCTGTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072228.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGTTCCGGGTCAGTGGGTaGGACTTCTCTGTGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASKNGNDPAENRTLPQFWFRVSG*DFSVIG Trigger: GCCAATCACAGAGAAGTCCAACCCACTGACCCGGAA...CCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | CCTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCACACTGCCCCAGCAGTaGAACAATTTTCTCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PATCITGTSPLRSGWRLFTLPQQ*NNFLCI Trigger: GATGCAGAGAAAATTGTTCAACTGCTGGGGCAGTGT...GAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CAA 90 bp | CTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAGTTTCCAGTAGAATCTaGGTGGCGCTTCCACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQRVLLAQVPSEVDGDFSVSSRI*VALPPF Trigger: GAAAGGTGGAAGCGCCACCAAGATTCTACTGGAAAC...TGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 90 bp | GAGCCTTGGACTGTCCTGAGAACCTTGTATTCAACACCCACTTGGTaGTTAACTCACGCTGGAACTTCTGAACGTAGCTCCCTTCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: EPWTVLRTLYSTPTW*LTHAGTSERSSLHN Trigger: ATTATGAAGGGAGCTACGTTCAGAAGTTCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGAATACAAGGTTCTCAGGACAGTCCAAGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072228.9 |
||
| CDS CCA 90 bp | CCAATAAGAAAGCCACGGATATCTCGGAAATCAGCACCAAAAGTGTaGATACACTCTACCCCATCCATAATGGCGATGATACCGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PIRKPRISRKSAPKV*IHSTPSIMAMIPRV Trigger: GACCCTCGGTATCATCGCCATTATGGATGGGGTAGAGTGTATCCACACTTTTGGTGCTGATTTCCGAGATATCCGTGGCTTTCTTATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CAA 90 bp | GAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCCGGGTCAGTGGGTaGGACTTCTCTGTGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EDASKNGNDPAENRTLPQFRVSG*DFSVIG Trigger: GCCAATCACAGAGAAGTCCAACCCACTGACCCGGAA...TTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CAA 90 bp | AGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGACCTTGCCAGCCACTaGCAACATGGTGGTCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKNGNDPAENRTLPQFWADLASH*QHGGQN Trigger: GTTCTGACCACCATGTTGCAAGTGGCTGGCAAGGTC...AGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CAA 90 bp | GATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCAGCACTTCCTGGACCTaGCCAGCCACTTGCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: DQKMPVKMEMIQLRTGLFSTSWT*PATCNM Trigger: CATGTTGCAAGTGGCTGGCAAGGTCCAGGAAGTGCT...GAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CAA 90 bp | TTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACGCCATGCTCACCGGATaGAAGCCAACCAGGACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFLRSEDASKNGNDPAENAMLTG*KPTRTG Trigger: GCCGGTCCTGGTTGGCTTCAATCCGGTGAGCATGGC...GTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CCA 90 bp | GAGGGAAATGTATCACTTGAAGAAGACTCTCAATGCAGCGAGCCTTaGACTGTCCTGAGAACCTTGTATTCAACACCCACTTGGTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: EGNVSLEEDSQCSEP*TVLRTLYSTPTWCL Trigger: TAAGCACCAAGTGGGTGTTGAATACAAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTCAAGTGATACATTTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072228.9 |
||
| CDS-3UTR CAA 90 bp | CACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCAATTCTCTGCATCTGCTTaGTCCAAGTTCCGGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HKSPQKWMETFQWSQKHQFSASA*SKFRVS Trigger: ACTGACCCGGAACTTGGACAAAGCAGATGCAGAGAA...TTGATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | GTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTCTCTGCATCTGCTTaGTCCAAGTTCCGGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VKMEMIQLRTGLFLNSGLFSASA*SKFRVS Trigger: ACTGACCCGGAACTTGGACAAAGCAGATGCAGAGAA...CAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | CCTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCTGTGTAAAGAGGTTTTaGTCCCAGACCTTTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: PATCITGTSPLRSGWRLFCVKRF*SQTFHQ Trigger: CTGATGAAAGGTCTGGGACAAAAACCTCTTTACACA...GAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | CACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCAAGTTTCCAGTAGAATCTaGGTGGCGCTTCCACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKSPQKWMETFQWSQKHQVSSRI*VALPPF Trigger: GAAAGGTGGAAGCGCCACCAAGATTCTACTGGAAAC...TTGATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | GTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTCCAGAAGGCATCTTaGAGAGGACACAACACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VKMEMIQLRTGLFLNSGLFQKAS*RGHNTL Trigger: CAGGGTGTTGTGTCCTCTCAAAGATGCCTTCTGGAA...CAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CCA 90 bp | ATCCAGGGTAAAAATGAAGACCACAGTGTCAATTTCCGTAAGGGATaGCAGAACAGAAGTCAGGAAGTCATCCTGAGAGAAGGTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: IQGKNEDHSVNFRKG*QNRSQEVILREGEL Trigger: CAGTTCACCTTCTCTCAGGATGACTTCCTGACTTCTGTTCTGCCATCCCTTACGGAAATTGACACTGTGGTCTTCATTTTTACCCTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | GGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCAATGGTCACAGAAACATCGGCAATTTTGGAACTTaGACTGTAGGTTACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GTSPLRSGWRLFNGHRNIGNFGT*TVGYLM Trigger: CATCAGGTAACCTACAGTCAAAGTTCCAAAATTGCC...GATGTTTCTGTGACCATTGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS-3UTR CAA 90 bp | GTTTTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGCATCCGCTCTGCCACTaGTCGGAATGTCGATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLFLRSEDASKNGNDPAEHPLCH*SECRSP Trigger: TGGAGATCGACATTCCGACAAGTGGCAGAGCGGATG...CTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | AAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTTACCTTTCATCAGCTGGTaGAAAGACACAGACATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KMEMIQLRTGLFLNSGLLPFISW*KDTDIR Trigger: CCTTATGTCTGTGTCTTTCAACCAGCTGATGAAAGG...TAACAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | GTAAAAATGGAAATGATCCAGCTGAGAACAGGACTCTTCCTCAATTCTGGGCTGTGTGTAAAGAGGTTTTaGTCCCAGACCTTTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: VKMEMIQLRTGLFLNSGLCVKRF*SQTFHQ Trigger: CTGATGAAAGGTCTGGGACAAAAACCTCTTTACACA...CAGCCCAGAATTGAGGAAGAGTCCTGTTCTCAGCTGGATCATTTCCATTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | CTGCAACGTGTATTACTGGCACAAGTCCCCTCAGAAGTGGATGGAGACTTTTCATGGTTAAACATGTCATaGTGGTCACCAATAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQRVLLAQVPSEVDGDFSWLNMS*WSPIRK Trigger: CTTTCTTATTGGTGACCACAATGACATGTTTAACCA...TGAAAAGTCTCCATCCACTTCTGAGGGGACTTGTGCCAGTAATACACGTTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | GTTTTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGTTCCAGAAGGCATCTTaGAGAGGACACAACACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLFLRSEDASKNGNDPAEFQKAS*RGHNTL Trigger: CAGGGTGTTGTGTCCTCTCAAAGATGCCTTCTGGAA...CTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS-3UTR CAA 90 bp | TTATTCCTAAGATCAGAAGATGCCAGTAAAAATGGAAATGATCCAGCTGAGAACTGGTTAAACATGTCATaGTGGTCACCAATAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFLRSEDASKNGNDPAENWLNMS*WSPIRK Trigger: CTTTCTTATTGGTGACCACAATGACATGTTTAACCA...GTTCTCAGCTGGATCATTTCCATTTTTACTGGCATCTTCTGATCTTAGGAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS CCA 72 bp | GGCAAGGACTGCCCCACTGTGCTGTGCACCAGGGCCTaGATGTTCCAACTCTTCTCCCTCACCCTTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GKDCPTVLCTRA*MFQLFSLTLSA Trigger: GGCAGAAAGGGTGAGGGAGAAGAGTTGGAACATCCAGGCCCTGGTGCACAGCACAGTGGGGCAGTCCTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS CCA 72 bp | GGGATCACCTTTTCCTTCTCGTGGGCAACCTGGACATaGCAGGAGATGGGGGCCGCGCGGACATCATTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: GITFSFSWATWT*QEMGAARTSFD Trigger: GTCGAATGATGTCCGCGCGGCCCCCATCTCCTGCCATGTCCAGGTTGCCCACGAGAAGGAAAAGGTGATCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS TCA 72 bp | CCACCAGGCCCCCATCTGGCTCCTGGTAGGTGGGCATaGTTTGCCCCTCCTCCTGGAATATCTCAGCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: PPGPHLAPGRWA*FAPPPGISQHH Trigger: GTGATGCTGAGATATTCCAGGAGGAGGGGCAAATCATGCCCACCTACCAGGAGCCAGATGGGGGCCTGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201675.3 |
||
| CDS CCA 72 bp | ACCACCAGGCCCCCATCTGGCTCCTTCAGCACTTCCTaGACCTTGCCAGCCACTTGCAACATGGTGGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: TTRPPSGSFSTS*TLPATCNMVVR Trigger: TCTGACCACCATGTTGCAAGTGGCTGGCAAGGTCCAGGAAGTGCTGAAGGAGCCAGATGGGGGCCTGGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS TCA 72 bp | ACCACAGGGTCTCCAAAGGCTTGGATGCTGCGTTTCTaGCCTGGCCCAGAGAGGGCGCTCCTAACAACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TTGSPKAWMLRF*PGPERALLTTS Trigger: TGAGGTTGTTAGGAGCGCCCTCTCTGGGCCAGGTCAGAAACGCAGCATCCAAGCCTTTGGAGACCCTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 72 bp | GGCCCCCATCTGGCTCCTTCAGCACTTCCTGGACCTTaGCAGCCACTTGCAACATGGTGGTCAGAACTGACT | + |
|
Preference number: 6 (lower is better) Translates to: GPHLAPSALPGP*QPLATWWSELT Trigger: AGTCAGTTCTGACCACCATGTTGCAAGTGGCTGGCAAGGTCCAGGAAGTGCTGAAGGAGCCAGATGGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CCA 72 bp | AGGGTCTCCAAAGGCTTGGATGCTGCGTTTCTGACCTaGCCCAGAGAGGGCGCTCCTAACAACCTCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RVSKGLDAAFLT*PREGAPNNLTD Trigger: GTCTGTGAGGTTGTTAGGAGCGCCCTCTCTGGGCCAGGTCAGAAACGCAGCATCCAAGCCTTTGGAGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CAA 72 bp | AGGCCCCCATCTGGCTCCTTCAGCACTTCCTGGACCTaGCCAGCCACTTGCAACATGGTGGTCAGAACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RPPSGSFSTSWT*PATCNMVVRTD Trigger: GTCAGTTCTGACCACCATGTTGCAAGTGGCTGGCAAGGTCCAGGAAGTGCTGAAGGAGCCAGATGGGGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CAA 72 bp | CAGGCCCCCATCTGGCTCCTGGTAGGTGGGCATGATTaGCCCCTCCTCCTGGAATATCTCAGCATCACACTG | + |
|
Preference number: 6 (lower is better) Translates to: QAPIWLLVGGHD*PLLLEYLSITL Trigger: CAGTGTGATGCTGAGATATTCCAGGAGGAGGGGCAAATCATGCCCACCTACCAGGAGCCAGATGGGGGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201675.3 |
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| CDS CAA 90 bp | TTCATTCGGGAAGAGCCACTGAGCCCCTCAGGCCCGATGGCAGGATaGAGCACAAAGGCTTCCTGTTTCTCCTGCATCTTCTGCATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: FIREEPLSPSGPMAG*STKASCFSCIFCIR Trigger: GCGGATGCAGAAGATGCAGGAGAAACAGGAAGCCTTTGTGCTCAATCCTGCCATCGGGCCTGAGGGGCTCAGTGGCTCTTCCCGAATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CAA 90 bp | GAGAACCTCTGCAACATGGCCAGTGCCCTCCAGAAGAGTTTGGAGTaGGCGATGCGGAGGTCCAGCATGTGGTTCTGTAGGATCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ENLCNMASALQKSLE*AMRRSSMWFCRIFP Trigger: GGGGAAGATCCTACAGAACCACATGCTGGACCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGGCACTGGCCATGTTGCAGAGGTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS GCA 72 bp | GACAGCTGTGTTATCCATGCAGTAGTCCATCTGGCCTaGCACAAAGGGCGCAGAGAGTCCCACGGAAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: DSCVIHAVVHLA*HKGRRESHGNA Trigger: GGCATTTCCGTGGGACTCTCTGCGCCCTTTGTGGCAGGCCAGATGGACTACTGCATGGATAACACAGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 72 bp | TGGCCAGTGCCCTCCAGAAGAGTTTGGAGTTGGCGATaGGGAGGTCCAGCATGTGGTTCTGTAGGATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WPVPSRRVWSWR*GGPACGSVGSS Trigger: GGAAGATCCTACAGAACCACATGCTGGACCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGGCACTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS CCA 72 bp | AAGAGTTTGGAGTTGGCGATGCGGAGGTCCAGCATGTaGTTCTGTAGGATCTTCCCCAGCAGCACATGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KSLELAMRRSSM*FCRIFPSSTWA Trigger: GGCCCATGTGCTGCTGGGGAAGATCCTACAGAACCACATGCTGGACCTCCGCATCGCCAACTCCAAACTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS CCA 72 bp | GCAACATGGCCAGTGCCCTCCAGAAGAGTTTGGAGTTaGCGATGCGGAGGTCCAGCATGTGGTTCTGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ATWPVPSRRVWS*RCGGPACGSVG Trigger: TCCTACAGAACCACATGCTGGACCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGGCACTGGCCATGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS CCA 72 bp | ACCTCTGCAACATGGCCAGTGCCCTCCAGAAGAGTTTaGAGTTGGCGATGCGGAGGTCCAGCATGTGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSATWPVPSRRV*SWRCGGPACGS Trigger: AGAACCACATGCTGGACCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGGCACTGGCCATGTTGCAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS CAA 90 bp | GACATGGCAGGAGATGGGGGCCGCGCGGACATCATTCGACAGCGGTaGAGGGAAATGTATCACTTGAAGAAGACTCTCAATGCAGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DMAGDGGRADIIRQR*REMYHLKKTLNAAS Trigger: GCTCGCTGCATTGAGAGTCTTCTTCAAGTGATACATTTCCCTCAACCGCTGTCGAATGATGTCCGCGCGGCCCCCATCTCCTGCCATGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CAA 90 bp | TGTCCTGAGAACCTCTGCAACATGGCCAGTGCCCTCCAGAAGAGTTaGGAGTTGGCGATGCGGAGGTCCAGCATGTGGTTCTGTAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: CPENLCNMASALQKS*ELAMRRSSMWFCRI Trigger: GATCCTACAGAACCACATGCTGGACCTCCGCATCGCCAACTCCAAACTCTTCTGGAGGGCACTGGCCATGTTGCAGAGGTTCTCAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS GCA 72 bp | GGCCTGGATGTTCCAACTCTTCTCCCTCACCCTTTCTaGCAGGGCCTGTACTTCTGCGAGGTTATCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLDVPTLLPHPF*QGLYFCEVIIQ Trigger: CTGGATGATAACCTCGCAGAAGTACAGGCCCTGGCAGAAAGGGTGAGGGAGAAGAGTTGGAACATCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 72 bp | TCAATGCAGCGAGCCTTGGACTGTCCTGAGAACCTCTaGAACATGGCCAGTGCCCTCCAGAAGAGTTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SMQRALDCPENL*NMASALQKSLE Trigger: CTCCAAACTCTTCTGGAGGGCACTGGCCATGTTGCAGAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS CCA 72 bp | GCACTTCCTGGACCTTGCCAGCCACTTGCAACATGGTaGTCAGAACTGACTCACTGTACAGTCGCTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALPGPCQPLATW*SELTHCTVAGR Trigger: CCTACCAGCGACTGTACAGTGAGTCAGTTCTGACCACCATGTTGCAAGTGGCTGGCAAGGTCCAGGAAGTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CAA 90 bp | TCCACAGTCTTATGGGCTGCTAGTAGCAGGGTTTCCAGTAGAATCTaGGTGGCGCTTCCACCTTTCATTCGGGAAGAGCCACTGAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: STVLWAASSRVSSRI*VALPPFIREEPLSP Trigger: GGGGCTCAGTGGCTCTTCCCGAATGAAAGGTGGAAGCGCCACCAAGATTCTACTGGAAACCCTGCTACTAGCAGCCCATAAGACTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS TCA 72 bp | TGTCCAAGTTCCGGGTCAGTGGGTTGGACTTCTCTGTaGTTGGCACAGCTGCTTCATACCCTGACAACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: CPSSGSVGWTSL*LAQLLHTLTTP Trigger: GGGAGTTGTCAGGGTATGAAGCAGCTGTGCCAATCACAGAGAAGTCCAACCCACTGACCCGGAACTTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
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| CDS TCA 72 bp | GACCTTGCCAGCCACTTGCAACATGGTGGTCAGAACTaGCTCACTGTACAGTCGCTGGTAGGTGGGCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: DLASHLQHGGQN*LTVQSLVGGHD Trigger: ATCATGCCCACCTACCAGCGACTGTACAGTGAGTCAGTTCTGACCACCATGTTGCAAGTGGCTGGCAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 72 bp | GGCTCCTTCAGCACTTCCTGGACCTTGCCAGCCACTTaGAACATGGTGGTCAGAACTGACTCACTGTACAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSFSTSWTLPAT*NMVVRTDSLYS Trigger: ACTGTACAGTGAGTCAGTTCTGACCACCATGTTGCAAGTGGCTGGCAAGGTCCAGGAAGTGCTGAAGGAGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS TCA 72 bp | GAACTGACTCACTGTACAGTCGCTGGTAGGTGGGCATaGTTTGCCCCTCCTCCTGGAATATCTCAGCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: ELTHCTVAGRWA*FAPPPGISQHH Trigger: GTGATGCTGAGATATTCCAGGAGGAGGGGCAAATCATGCCCACCTACCAGCGACTGTACAGTGAGTCAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS TCA 72 bp | CTTCAATGGGATCATTTCTGGCCATGCTCACCGGATTaGAGCCAACCAGGACCGGCAAGAAGACAGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LQWDHFWPCSPD*SQPGPARRQLC Trigger: ACACAGCTGTCTTCTTGCCGGTCCTGGTTGGCTTCAATCCGGTGAGCATGGCCAGAAATGATCCCATTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 72 bp | CCGTTCCCGAGAGGCTACAACAGACCTGTCACCCCCTaGAATGAGGTATGTGTAAAGAGGTTTTTGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PFPRGYNRPVTP*NEVCVKRFLSQ Trigger: CTGGGACAAAAACCTCTTTACACATACCTCATTGCAGGGGGTGACAGGTCTGTTGTAGCCTCTCGGGAACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 72 bp | GGGCCCCAGTACTCACTGTATTCAACACCCACTTGGTaGTTAACTCACGCTGGAACTTCTGAACGTAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPQYSLYSTPTW*LTHAGTSERSS Trigger: GGAGCTACGTTCAGAAGTTCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGAATACAGTGAGTACTGGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS CAA 72 bp | TCTTCAATGGGATCATTTCTGGCCATGCTCACCGGATaGAAGCCAACCAGGACCGGCAAGAAGACAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSMGSFLAMLTG*KPTRTGKKTAV Trigger: CACAGCTGTCTTCTTGCCGGTCCTGGTTGGCTTCAATCCGGTGAGCATGGCCAGAAATGATCCCATTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 72 bp | TTTCATCAGCTGGTTGAAAGACACAGACATAAGGAATaGCATACGACCAGAGGTGCCCCCTCCACTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FHQLVERHRHKE*HTTRGAPSTQH Trigger: GTGCTGAGTGGAGGGGGCACCTCTGGTCGTATGGCATTCCTTATGTCTGTGTCTTTCAACCAGCTGATGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
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| CDS GCA 72 bp | GGCTTCCTGTTTCTCCTGCATCTTCTGCATCCGCTCTaGCACTTGTCGGAATGTCGATCTCCAGTCTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GFLFLLHLLHPL*HLSECRSPVFN Trigger: ATTGAAGACTGGAGATCGACATTCCGACAAGTGGCAGAGCGGATGCAGAAGATGCAGGAGAAACAGGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 72 bp | CTTCTCCCTCACCCTTTCTGCCAGGGCCTGTACTTCTaGGAGGTTATCATCCAGGGTAAAAATGAAGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLPHPFCQGLYF*EVIIQGKNEDH Trigger: GTGGTCTTCATTTTTACCCTGGATGATAACCTCGCAGAAGTACAGGCCCTGGCAGAAAGGGTGAGGGAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CCA 72 bp | CATGGGCCCCAGTACTCACTGTATTCAACACCCACTTaGTGCTTAACTCACGCTGGAACTTCTGAACGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: HGPQYSLYSTPT*CLTHAGTSERS Trigger: GCTACGTTCAGAAGTTCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGAATACAGTGAGTACTGGGGCCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS CCA 72 bp | GTATCACTTGAAGAAGACTCTCAATGCAGCGAGCCTTaGACTGTCCTGAGAACCTCTGCAACATGGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSLEEDSQCSEP*TVLRTSATWPV Trigger: CACTGGCCATGTTGCAGAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTCAAGTGATAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
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| CDS CAA 72 bp | TCTGCATCTGCTTTGTCCAAGTTCCGGGTCAGTGGGTaGGACTTCTCTGTGATTGGCACAGCTGCTTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SASALSKFRVSG*DFSVIGTAASY Trigger: GTATGAAGCAGCTGTGCCAATCACAGAGAAGTCCAACCCACTGACCCGGAACTTGGACAAAGCAGATGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
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| CDS CAA 72 bp | TTATGGGCTGCTAGTAGCAGGGTTTCCAGTAGAATCTaGGTGGCGCTTCCACCTTTCATTCGGGAAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LWAASSRVSSRI*VALPPFIREEP Trigger: TGGCTCTTCCCGAATGAAAGGTGGAAGCGCCACCAAGATTCTACTGGAAACCCTGCTACTAGCAGCCCATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CAA 90 bp | AAAGGCTTCCTGTTTCTCCTGCATCTTCTGCATCCGCTCTGCCACTaGTCGGAATGTCGATCTCCAGTCTTCAATGGGATCATTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KGFLFLLHLLHPLCH*SECRSPVFNGIISG Trigger: GCCAGAAATGATCCCATTGAAGACTGGAGATCGACATTCCGACAAGTGGCAGAGCGGATGCAGAAGATGCAGGAGAAACAGGAAGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS GCA 72 bp | ACACTGCCCCAGCAGTTGAACAATTTTCTCTGCATCTaGTTTGTCCAAGTTCCGGGTCAGTGGGTTGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: TLPQQLNNFLCI*FVQVPGQWVGL Trigger: AAGTCCAACCCACTGACCCGGAACTTGGACAAAGCAGATGCAGAGAAAATTGTTCAACTGCTGGGGCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
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| CDS GCA 72 bp | AGCATCACACTGCCCCAGCAGTTGAACAATTTTCTCTaGATCTGCTTTGTCCAAGTTCCGGGTCAGTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SITLPQQLNNFL*ICFVQVPGQWV Trigger: AACCCACTGACCCGGAACTTGGACAAAGCAGATGCAGAGAAAATTGTTCAACTGCTGGGGCAGTGTGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
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| CDS CAA 90 bp | ACAATTTTCTCTGCATCTGCTTTGTCCAAGTTCCGGGTCAGTGGGTaGGACTTCTCTGTGATTGGCACAGCTGCTTCATACCCTGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: TIFSASALSKFRVSG*DFSVIGTAASYPDN Trigger: GTTGTCAGGGTATGAAGCAGCTGTGCCAATCACAGAGAAGTCCAACCCACTGACCCGGAACTTGGACAAAGCAGATGCAGAGAAAATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
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| CDS GCA 72 bp | ACTGTCCTGAGAACCTTGTATTCAACACCCACTTGGTaGTTAACTCACGCTGGAACTTCTGAACGTAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVLRTLYSTPTW*LTHAGTSERSS Trigger: GGAGCTACGTTCAGAAGTTCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGAATACAAGGTTCTCAGGACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072228.9 |
||
| CDS GCA 72 bp | GTTGAGGGAAATGTATCACTTGAAGAAGACTCTCAATaGAGCGAGCCTTGGACTGTCCTGAGAACCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VEGNVSLEEDSQ*SEPWTVLRTSA Trigger: TGCAGAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTCAAGTGATACATTTCCCTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201166.4 |
||
| CDS CCA 72 bp | TGGACTGTCCTGAGAACCTTGTATTCAACACCCACTTaGTGCTTAACTCACGCTGGAACTTCTGAACGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: WTVLRTLYSTPT*CLTHAGTSERS Trigger: GCTACGTTCAGAAGTTCCAGCGTGAGTTAAGCACCAAGTGGGTGTTGAATACAAGGTTCTCAGGACAGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072228.9 |
||
| CDS CCA 72 bp | CTGAACGTAGCTCCCTTCATAATCGAAGAAAAGAAGTaGCCATGTGATGCTGATGAGCGAGGGAAAGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LNVAPFIIEEKK*PCDADERGKEL Trigger: AAGCTCTTTCCCTCGCTCATCAGCATCACATGGCCACTTCTTTTCTTCGATTATGAAGGGAGCTACGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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| CDS CCA 72 bp | GTATCACTTGAAGAAGACTCTCAATGCAGCGAGCCTTaGACTGTCCTGAGAACCTTGTATTCAACACCCACT | + |
|
Preference number: 6 (lower is better) Translates to: VSLEEDSQCSEP*TVLRTLYSTPT Trigger: AGTGGGTGTTGAATACAAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTCAAGTGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072228.9 |
||
| CDS TCA 72 bp | TCCTGGAATATCTCAGCATCACACTGCCCCAGCAGTTaGACAATTTTCTCTGCATCTGCTTTGTCCAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWNISASHCPSS*TIFSASALSKF Trigger: GAACTTGGACAAAGCAGATGCAGAGAAAATTGTTCAACTGCTGGGGCAGTGTGATGCTGAGATATTCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
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| CDS GCA 72 bp | GTTGAGGGAAATGTATCACTTGAAGAAGACTCTCAATaGAGCGAGCCTTGGACTGTCCTGAGAACCTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: VEGNVSLEEDSQ*SEPWTVLRTLY Trigger: ATACAAGGTTCTCAGGACAGTCCAAGGCTCGCTGCATTGAGAGTCTTCTTCAAGTGATACATTTCCCTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072228.9 |
||
| CDS CCA 72 bp | AAGCCACGGATATCTCGGAAATCAGCACCAAAAGTGTaGATACACTCTACCCCATCCATAATGGCGATGATA | + |
|
Preference number: 6 (lower is better) Translates to: KPRISRKSAPKV*IHSTPSIMAMI Trigger: TATCATCGCCATTATGGATGGGGTAGAGTGTATCCACACTTTTGGTGCTGATTTCCGAGATATCCGTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
||
| CDS CAA 72 bp | CTCCTGGAATATCTCAGCATCACACTGCCCCAGCAGTaGAACAATTTTCTCTGCATCTGCTTTGTCCAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLEYLSITLPQQ*NNFLCICFVQV Trigger: AACTTGGACAAAGCAGATGCAGAGAAAATTGTTCAACTGCTGGGGCAGTGTGATGCTGAGATATTCCAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 ENSMUST00000201675.3 |
||
| CDS CCA 72 bp | AAAAATGAAGACCACAGTGTCAATTTCCGTAAGGGATaGCAGAACAGAAGTCAGGAAGTCATCCTGAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: KNEDHSVNFRKG*QNRSQEVILRE Trigger: TTCTCTCAGGATGACTTCCTGACTTCTGTTCTGCCATCCCTTACGGAAATTGACACTGTGGTCTTCATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072228.9 ENSMUST00000201166.4 |
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