Pregenerated sensors for GCK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041798Ensembl transcript IDs: ENSMUST00000102920.4, ENSMUST00000109822.8, ENSMUST00000109823.9, ENSMUST00000125434.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCCTTACTCTTCTGGGGGCCCAGGTCTGGTCTGGCCAAGCTGCTaGAGCTACCTCCCCATGGAGATGTGTTCCCAGGGAAGCCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: SPYSSGGPGLVWPSC*SYLPMEMCSQGSQA Trigger: GGCCTGGCTTCCCTGGGAACACATCTCCATGGGGAGGTAGCTTCAGCAGCTTGGCCAGACCAGACCTGGGCCCCCAGAAGAGTAAGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR CCA 90 bp | GTTCCCAGGGAAGCCAGGCCATTGCAAGTCCAGGAGGCACTCCCTTaGGAGGCCAGACCCACAGCTGTGGGAGGCCAGAAGCTGAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: VPREARPLQVQEALP*EARPTAVGGQKLKE Trigger: CTCTTTCAGCTTCTGGCCTCCCACAGCTGTGGGTCTGGCCTCCCAAGGGAGTGCCTCCTGGACTTGCAATGGCCTGGCTTCCCTGGGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR CCA 90 bp | GGGGCCCAGGTCTGGTCTGGCCAAGCTGCTGAAGCTACCTCCCCATaGAGATGTGTTCCCAGGGAAGCCAGGCCATTGCAAGTCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: GAQVWSGQAAEATSP*RCVPREARPLQVQE Trigger: CTCCTGGACTTGCAATGGCCTGGCTTCCCTGGGAACACATCTCCATGGGGAGGTAGCTTCAGCAGCTTGGCCAGACCAGACCTGGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR CCA 90 bp | GCCACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTaGGGGCCCAGGTCTGGTCTGGCCAAGCTGCTGAAGCTACCTCCC | + |
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Preference number: 1 (lower is better) Translates to: ATGKKTARSGQPLLF*GPRSGLAKLLKLPP Trigger: GGGAGGTAGCTTCAGCAGCTTGGCCAGACCAGACCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR GCA 90 bp | ATTCTAGCAAGAAAGGCTTTTGGTGCCGCTGATCCTCTTGCCCCTTaGCCCAGGCTGAGAGCCCTAGGGCTGTCTCACTGGCTGACTTGG | + |
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Preference number: 1 (lower is better) Translates to: ILARKAFGAADPLAP*PRLRALGLSHWLTW Trigger: CCAAGTCAGCCAGTGAGACAGCCCTAGGGCTCTCAGCCTGGGGCAAGGGGCAAGAGGATCAGCGGCACCAAAAGCCTTTCTTGCTAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR CCA 90 bp | GCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGGGACCTaGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: AWHLGNLTGMRDRGT*VVSWRDAVGGLLLF Trigger: GAAGAGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| 3UTR CCA 90 bp | TTAAAAACTCCCCCATGGTTCCAAGCTGGTGTGGAGAGGGCGGCATaGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGGGACCTGG | + |
|
Preference number: 1 (lower is better) Translates to: LKTPPWFQAGVERAA*HLGNLTGMRDRGTW Trigger: CCAGGTCCCTCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGCTTGGAACCATGGGGGAGTTTTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCAGGTCTGGTCTGGCCAAGCTGCCTAGGGCTGTCTCACTaGCTGACTTGGCTTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GLGSPYSSGGPGLVWPSCLGLSH*LTWLAG Trigger: CCCTGCAAGCCAAGTCAGCCAGTGAGACAGCCCTAG...GCAGCTTGGCCAGACCAGACCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCAGGAGCATTTGTGGGGTGTaGAGTCCCCGTGGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: TGKKTARSGQPLLFWGPRSICGV*SPRGTQ Trigger: CTGGGTTCCACGGGGACTCCACACCCCACAAATGCT...CCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCATGGTTCCAAGCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTAGCATTTGTGGGGTGTaGAGTCCCCGTGGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: SPMVPSWCGEGGMASGKPSICGV*SPRGTQ Trigger: CTGGGTTCCACGGGGACTCCACACCCCACAAATGCT...AGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGCTTGGAACCATGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR-3UTR CCA 90 bp | GGGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCCTAGGGCTGTCTCACTaGCTGACTTGGCTTGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GTEGPGWFPGEMLWVACFLGLSH*LTWLAG Trigger: CCCTGCAAGCCAAGTCAGCCAGTGAGACAGCCCTAG...GAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTGGCTGACTTGGCTTaGAGGGGCCTCTCCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: RDRGTWVVSWRDAVGGLLLADLA*RGLSPF Trigger: AAATGGGGAGAGGCCCCTGCAAGCCAAGTCAGCCAG...AAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR-3UTR CAA 90 bp | GGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCAGGTCTGGTCTGGCCAAGCTGCGTCTCACTGGCTGACTaGGCTTGCAGGGGCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: GLGSPYSSGGPGLVWPSCVSLAD*ACRGLS Trigger: GGAGAGGCCCCTGCAAGCCAAGTCAGCCAGTGAGAC...GCAGCTTGGCCAGACCAGACCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR-3UTR CAA 90 bp | GGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTCCAGGAGGCACTCCCTaGGGAGGCCAGACCCACAGC | + |
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Preference number: 3 (lower is better) Translates to: GQRDLGGFLERCCGWLASPGGTP*GGQTHS Trigger: GCTGTGGGTCTGGCCTCCCAAGGGAGTGCCTCCTGG...AGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR-3UTR CAA 90 bp | CCACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCAAGGGAAGCCAGGCCATaGCAAGTCCAGGAGGCACTC | + |
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Preference number: 3 (lower is better) Translates to: PQARKQPGLGSPYSSGGPREARP*QVQEAL Trigger: GAGTGCCTCCTGGACTTGCAATGGCCTGGCTTCCCT...TGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR TCA 72 bp | TCTTCTGGGGGCCCAGGTCTGGTCTGGCCAAGCTGCTaGAGCTACCTCCCCATGGAGATGTGTTCCCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SSGGPGLVWPSC*SYLPMEMCSQG Trigger: TCCCTGGGAACACATCTCCATGGGGAGGTAGCTTCAGCAGCTTGGCCAGACCAGACCTGGGCCCCCAGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR CCA 72 bp | AGCCTCTTCAGCCACAGGCAAGAAAACAGCCAGGTCTaGGCAGCCCTTACTCTTCTGGGGGCCCAGGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: SLFSHRQENSQV*AALTLLGAQVW Trigger: CCAGACCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGGCTGAAGAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR CCA 72 bp | AGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTaGGCCTCTATCCTCTGGCATCTCCTAGGAGGGTTC | + |
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Preference number: 3 (lower is better) Translates to: RRSPSGPLEQGL*ASILWHLLGGF Trigger: GAACCCTCCTAGGAGATGCCAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR CCA 72 bp | AATAGGTCTCCTGCCCTAGTGGACTGGGAGCATTTGTaGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: NRSPALVDWEHL*GVESPWNPGPC Trigger: ACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCAGTCCACTAGGGCAGGAGACCTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 ENSMUST00000125434.2 |
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| 3UTR CCA 72 bp | AAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTaGGGGCCCAGGTCTGGTCTGGCCAAGCTGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: KKTARSGQPLLF*GPRSGLAKLLK Trigger: CTTCAGCAGCTTGGCCAGACCAGACCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| 3UTR CCA 72 bp | CTGGGAAACCTGACAGGGATGAGGGACAGAGGGACCTaGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LGNLTGMRDRGT*VVSWRDAVGGL Trigger: CAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCCTCATCCCTGTCAGGTTTCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| 3UTR CCA 72 bp | ACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTaGGTGGCTTGCTTCTCTTCCCGGATCACTGATGTG | + |
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Preference number: 3 (lower is better) Translates to: TEGPGWFPGEML*VACFSSRITDV Trigger: CACATCAGTGATCCGGGAAGAGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| 3UTR GCA 72 bp | CCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTaGTTCTCTTCCCGGATCACTGATGTGAGTGTTGAA | + |
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Preference number: 3 (lower is better) Translates to: PGWFPGEMLWVA*FSSRITDVSVE Trigger: TTCAACACTCACATCAGTGATCCGGGAAGAGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| 3UTR CCA 72 bp | AAATATTTAATTAAAAACTCCCCCATGGTTCCAAGCTaGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCT | + |
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Preference number: 3 (lower is better) Translates to: KYLIKNSPMVPS*CGEGGMASGKP Trigger: AGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGCTTGGAACCATGGGGGAGTTTTTAATTAAATATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR GCA 90 bp | CAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCAGGTCTGGTCTGGCCACACCGCAGAGACCAGTaGGGCTCCCCTGCCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QPGLGSPYSSGGPGLVWPHRRDQ*GSPAAA Trigger: GGCAGCGGCAGGGGAGCCGCACTGGTCTCTGCGGTG...TGGCCAGACCAGACCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| CDS-3UTR GCA 90 bp | CAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCAGGTCTGGTCTGGCCACCACGTGTGCGCAGCTaGTCTGAGGCCTCTCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: QPGLGSPYSSGGPGLVWPPRVRS*SEASPW Trigger: CCACGGAGAGGCCTCAGAGCAGCTGCGCACACGTGG...TGGCCAGACCAGACCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| CDS-3UTR GCA 90 bp | AGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCTGGCACCGCAGAGACCAGTaGGGCTCCCCTGCCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SICGVWSPRGTQVPVLAWHRRDQ*GSPAAA Trigger: GGCAGCGGCAGGGGAGCCGCACTGGTCTCTGCGGTG...CCAGGCAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 ENSMUST00000125434.2 |
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| CDS-3UTR GCA 90 bp | CAGAGTGAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCACCGCAGAGACCAGTaGGGCTCCCCTGCCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QSEALPFRSPRARTLGLYHRRDQ*GSPAAA Trigger: GGCAGCGGCAGGGGAGCCGCACTGGTCTCTGCGGTG...ATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTCACTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR GCA 90 bp | GAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGCCACGTGTGCGCAGCTaGTCTGAGGCCTCTCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: EALPFRSPRARTLGLYPLPRVRS*SEASPW Trigger: CCACGGAGAGGCCTCAGAGCAGCTGCGCACACGTGG...CAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR GCA 90 bp | GCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACCCAGTGCGGCTCCCCTaGCGCTGCCCTCCTCTGATT | + |
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Preference number: 4 (lower is better) Translates to: AGVERAAWHLGNLTGMRDPVRLP*RCPPLI Trigger: AATCAGAGGAGGGCAGCGGCAGGGGAGCCGCACTGG...GTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR GCA 90 bp | CTGGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCAGTGCGGCTCCCCTaGCGCTGCCCTCCTCTGATT | + |
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Preference number: 4 (lower is better) Translates to: LGAFVGCGVPVEPRSLSLPVRLP*RCPPLI Trigger: AATCAGAGGAGGGCAGCGGCAGGGGAGCCGCACTGG...CAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 ENSMUST00000125434.2 |
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| CDS-3UTR CCA 90 bp | GAGAGCCCTAGGGCTGTCTCACTGGCTGACTTGGCTTGCAGGGGCCTCTCCCCACCGCAGTGCCCGTCATaGCGTCCTCGGGGATGGAAT | + |
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Preference number: 4 (lower is better) Translates to: ESPRAVSLADLACRGLSPPQCPS*RPRGWN Trigger: ATTCCATCCCCGAGGACGCCATGACGGGCACTGCGG...TGGGGAGAGGCCCCTGCAAGCCAAGTCAGCCAGTGAGACAGCCCTAGGGCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| CDS-3UTR CCA 90 bp | AGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCTGGCCTTGGAGCCTCCCTTaGAGCCCGGGAGGTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SICGVWSPRGTQVPVLAWPWSLP*SPGGWS Trigger: GCTCCAACCTCCCGGGCTCCAAGGGAGGCTCCAAGG...CCAGGCAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125434.2 |
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| CDS-3UTR TCA 90 bp | AGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGTGTGCGCAGCTGCTCTaGGGCCTCTCCGTGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: RRSPSGPLEQGLWASILWCAQLL*GLSVEQ Trigger: CTGTTCCACGGAGAGGCCTCAGAGCAGCTGCGCACA...CCAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR TCA 90 bp | AGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGCATCCACGCCCACCGTaGTGCGCATCACGTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RRSPSGPLEQGLWASILWHPRPP*CASRPH Trigger: GTGAGGACGTGATGCGCATCACGGTGGGCGTGGATG...CCAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR TCA 90 bp | TGGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCTGCGCACACTGGCGTaGAACCGCTCCTTGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: WEHLWGVESPWNPGPCPCLRTLA*NRSLKP Trigger: GGGCTTCAAGGAGCGGTTTCACGCCAGTGTGCGCAG...GCAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125434.2 |
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| CDS-3UTR GCA 90 bp | GGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGGGACCTGGGTCACGCTCCACTGTCCTaGCTCCCCCTCCCCCACTTT | + |
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Preference number: 4 (lower is better) Translates to: GGMASGKPDRDEGQRDLGHAPLS*LPLPHF Trigger: AAAGTGGGGGAGGGGGAGGCAGGACAGTGGAGCGTG...ACCCAGGTCCCTCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR GCA 90 bp | GGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGGGACCTGGGTAGAGCATCTCCGCAGTaGCCGTCATGGCGTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GGMASGKPDRDEGQRDLGRASPQ*PSWRPR Trigger: CCGAGGACGCCATGACGGGCACTGCGGAGATGCTCT...ACCCAGGTCCCTCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR GCA 90 bp | CTGGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGAGAGCATCTCCGCAGTaGCCGTCATGGCGTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LGAFVGCGVPVEPRSLSLRASPQ*PSWRPR Trigger: CCGAGGACGCCATGACGGGCACTGCGGAGATGCTCT...CAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
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| CDS-3UTR GCA 90 bp | TCCCCCATGGTTCCAAGCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTCCAGTGCGGCTCCCCTaGCGCTGCCCTCCTCTGATT | + |
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Preference number: 4 (lower is better) Translates to: SPMVPSWCGEGGMASGKPPVRLP*RCPPLI Trigger: AATCAGAGGAGGGCAGCGGCAGGGGAGCCGCACTGG...AGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGCTTGGAACCATGGGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR CCA 90 bp | AGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGTGTGGGCGGCGCGAGTaGACACGCTTTCACAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RRSPSGPLEQGLWASILWCGRRE*TRFHRH Trigger: GTGCCTGTGAAAGCGTGTCCACTCGCGCCGCCCACA...CCAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR TCA 90 bp | TGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGGTGTGCGCAGCTGCTCTaGGGCCTCTCCGTGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: CGEGGMASGKPDRDEGQRCAQLL*GLSVEQ Trigger: CTGTTCCACGGAGAGGCCTCAGAGCAGCTGCGCACA...CCTCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR TCA 90 bp | CAGAGTGAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCATCCACGCCCACCGTaGTGCGCATCACGTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: QSEALPFRSPRARTLGLYHPRPP*CASRPH Trigger: GTGAGGACGTGATGCGCATCACGGTGGGCGTGGATG...ATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTCACTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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| CDS-3UTR TCA 90 bp | AGCCACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCATCCACGCCCACCGTaGTGCGCATCACGTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHRQENSQVWAALTLLGAHPRPP*CASRPH Trigger: GTGAGGACGTGATGCGCATCACGGTGGGCGTGGATG...GGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCAGGTCTGGTCTGGCCATTCAGGTCTTCCTCCTaGAGCTGGAACTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPGLGSPYSSGGPGLVWPFRSSS*SWNSAR Trigger: CCTGGCAGAGTTCCAGCTGCAGGAGGAAGACCTGAA...TGGCCAGACCAGACCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGGCACGCTCCACTGTCCTaGCTCCCCCTCCCCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CGEGGMASGKPDRDEGQRHAPLS*LPLPHF Trigger: AAAGTGGGGGAGGGGGAGGCAGGACAGTGGAGCGTG...CCTCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | CCCATGGTTCCAAGCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACCCGCAGTGCCCGTCATaGCGTCCTCGGGGATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PMVPSWCGEGGMASGKPDPQCPS*RPRGWN Trigger: ATTCCATCCCCGAGGACGCCATGACGGGCACTGCGG...GTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGCTTGGAACCATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | GGGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCCCGCAGTGCCCGTCATaGCGTCCTCGGGGATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTEGPGWFPGEMLWVACFPQCPS*RPRGWN Trigger: ATTCCATCCCCGAGGACGCCATGACGGGCACTGCGG...GAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGCATCTTGTGCGCAGCTGCTCTaGGGCCTCTCCGTGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPFRSPRARTLGLYPLASCAQLL*GLSVEQ Trigger: CTGTTCCACGGAGAGGCCTCAGAGCAGCTGCGCACA...AGATGCCAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACCGTGAAACCGCTCCTTaGAGCTCGGGTGCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGVERAAWHLGNLTGMRDRETAP*SSGAAC Trigger: ACAAGCTGCACCCGAGCTTCAAGGAGCGGTTTCACG...GTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | TGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGCTGCGCACACTGGCGTaGAACCGCTCCTTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WCGEGGMASGKPDRDEGQLRTLA*NRSLKL Trigger: GAGCTTCAAGGAGCGGTTTCACGCCAGTGTGCGCAG...CTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGCAGAGTGAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCCGGTCCATCTCCTTCTaGATCCGGCTCATCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QCRVRRSPSGPLEQGLWARSISF*IRLITF Trigger: GAAGGTGATGAGCCGGATGCAGAAGGAGATGGACCG...GGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTCACTCTGCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | GGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTAGAGCATCTCCGCAGTaGCCGTCATGGCGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQRDLGGFLERCCGWLASRASPQ*PSWRPR Trigger: CCGAGGACGCCATGACGGGCACTGCGGAGATGCTCT...AGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGCAGAGTGAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCGATGTTGTTCCCTTCTaGTCCGGAGGCCTTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCRVRRSPSGPLEQGLWADVVPF*SGGLEA Trigger: GGCTTCAAGGCCTCCGGAGCAGAAGGGAACAACATC...GGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTCACTCTGCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACCCATGTAGCAGGCGTTaGAGCCGGTGCCCACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: AGVERAAWHLGNLTGMRDPCSRR*SRCPQS Trigger: TGATTGTGGGCACCGGCTGCAACGCCTGCTACATGG...GTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | CCCCCATGGTTCCAAGCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGCCATGTAGCAGGCGTTaGAGCCGGTGCCCACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PPWFQAGVERAAWHLGNLPCSRR*SRCPQS Trigger: TGATTGTGGGCACCGGCTGCAACGCCTGCTACATGG...CAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGCTTGGAACCATGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAATAGGTCTCCTGCCCTAGTGGACTGGGAGCATTTGTGGGGTGTGGAGCCACGTGTGCGCAGCTaGTCTGAGGCCTCTCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQNRSPALVDWEHLWGVEPRVRS*SEASPW Trigger: CCACGGAGAGGCCTCAGAGCAGCTGCGCACACGTGG...CTCCACACCCCACAAATGCTCCCAGTCCACTAGGGCAGGAGACCTATTCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGCATCACGTCCTCACTaGGGCTTTCGCGCATGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: EALPFRSPRARTLGLYPLASRPH*GFRACD Trigger: ATCGCATGCGCGAAAGCCGCAGTGAGGACGTGATGC...CAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | AGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCTGGGCATGCAAGCCTTCTTaGAGGCCACCGCAGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SICGVWSPRGTQVPVLAWACKPS*RPPQRP Trigger: TGGTCTCTGCGGTGGCCTGCAAGAAGGCTTGCATGC...CCAGGCAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 ENSMUST00000125434.2 |
||
| CDS-3UTR CCA 90 bp | AGGGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTTGTGGGCGGCGCGAGTaGACACGCTTTCACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDRGTWVVSWRDAVGGLLCGRRE*TRFHRH Trigger: GTGCCTGTGAAAGCGTGTCCACTCGCGCCGCCCACA...AAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| 3UTR CAA 72 bp | CAGAATAGGTCTCCTGCCCTAGTGGACTGGGAGCATTaGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QNRSPALVDWEH*WGVESPWNPGP Trigger: GGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCAGTCCACTAGGGCAGGAGACCTATTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 ENSMUST00000125434.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGCGTGAAACCGCTCCTTaGAGCTCGGGTGCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WCGEGGMASGKPDRDEGQRETAP*SSGAAC Trigger: ACAAGCTGCACCCGAGCTTCAAGGAGCGGTTTCACG...CTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | GGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTCTGCGCACACTGGCGTaGAACCGCTCCTTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQRDLGGFLERCCGWLASLRTLA*NRSLKL Trigger: GAGCTTCAAGGAGCGGTTTCACGCCAGTGTGCGCAG...AGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | GGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCGCCGCTGCCCTCCTCTaGTTCAATGAAGGTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSICGVWSPRGTQVPVLAAAALL*FNEGDF Trigger: GAAATCACCTTCATTGAATCAGAGGAGGGCAGCGGC...GGCAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 ENSMUST00000125434.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGGGACTTCAGGTCTTCCTCCTaGAGCTGGAACTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEGGMASGKPDRDEGQRDFRSSS*SWNSAR Trigger: CCTGGCAGAGTTCCAGCTGCAGGAGGAAGACCTGAA...GTCCCTCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCTCTTCAGCCACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCACGCTCCACTGTCCTaGCTCCCCCTCCCCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLFSHRQENSQVWAALTHAPLS*LPLPHF Trigger: AAAGTGGGGGAGGGGGAGGCAGGACAGTGGAGCGTG...AGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGGCTGAAGAGGCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | GGGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCGCATCACGTCCTCACTaGGGCTTTCGCGCATGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTEGPGWFPGEMLWVACFASRPH*GFRACD Trigger: ATCGCATGCGCGAAAGCCGCAGTGAGGACGTGATGC...GAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | GGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGGGACCTGGGTTCCTTGAAGCTCGGGTaGAGCTTGTACACGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGMASGKPDRDEGQRDLGSLKLG*SLYTEP Trigger: TGGCTCCGTGTACAAGCTGCACCCGAGCTTCAAGGA...ACCCAGGTCCCTCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGCAGAGTGAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTGGCGTCCTCGGGGATaGAATACATCTGGTGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QCRVRRSPSGPLEQGLWAWRPRG*NTSGVS Trigger: CGAAACACCAGATGTATTCCATCCCCGAGGACGCCA...GGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTCACTCTGCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGTGAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATTCACCAGCATCACCCTaGAGTTGGTTCCTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSEALPFRSPRARTLGLYSPASP*SWFLPG Trigger: ACCTGGGAGGAACCAACTTCAGGGTGATGCTGGTGA...ATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTCACTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | TCCCCCATGGTTCCAAGCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTTCACCAGCATCACCCTaGAGTTGGTTCCTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPMVPSWCGEGGMASGKPSPASP*SWFLPG Trigger: ACCTGGGAGGAACCAACTTCAGGGTGATGCTGGTGA...AGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGCTTGGAACCATGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCAGGTCACCAGCATCACCCTaGAGTTGGTTCCTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGKKTARSGQPLLFWGPRSPASP*SWFLPG Trigger: ACCTGGGAGGAACCAACTTCAGGGTGATGCTGGTGA...CCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | CAGAATAGGTCTCCTGCCCTAGTGGACTGGGAGCATTTGTGGGGTGTGGAGTCCCTGCGCACACTGGCGTaGAACCGCTCCTTGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QNRSPALVDWEHLWGVESLRTLA*NRSLKL Trigger: GAGCTTCAAGGAGCGGTTTCACGCCAGTGTGCGCAG...GGACTCCACACCCCACAAATGCTCCCAGTCCACTAGGGCAGGAGACCTATTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | GAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGCCGCTGCCCTCCTCTaGTTCAATGAAGGTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: EALPFRSPRARTLGLYPLAAALL*FNEGDF Trigger: GAAATCACCTTCATTGAATCAGAGGAGGGCAGCGGC...CAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | GGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGGGACCTGGGTGCCGCTGCCCTCCTCTaGTTCAATGAAGGTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGMASGKPDRDEGQRDLGAAALL*FNEGDF Trigger: GAAATCACCTTCATTGAATCAGAGGAGGGCAGCGGC...ACCCAGGTCCCTCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCTCGTGAAACCGCTCCTTaGAGCCCAGACTGCAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: GAFVGCGVPVEPRSLSLPRETAP*SPDCSI Trigger: TATACTGCAGTCTGGGCTTCAAGGAGCGGTTTCACG...AGGCAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125434.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGCTGCAGCTGGAACTCTaGCAGGATCTGCTCTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: EALPFRSPRARTLGLYPLLQLEL*QDLLYL Trigger: AAGGTAGAGCAGATCCTGGCAGAGTTCCAGCTGCAG...CAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102920.4 |
||
| CDS-3UTR GCA 90 bp | AGCCACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCTTCAGGTCTTCCTCCTaGAGCTGGAACTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHRQENSQVWAALTLLGAFRSSS*SWNSAR Trigger: CCTGGCAGAGTTCCAGCTGCAGGAGGAAGACCTGAA...GGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | CCCATGGTTCCAAGCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACCGGTCCATCTCCTTCTaGATCCGGCTCATCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PMVPSWCGEGGMASGKPDRSISF*IRLITF Trigger: GAAGGTGATGAGCCGGATGCAGAAGGAGATGGACCG...GTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGCTTGGAACCATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | GGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTGCATCACGTCCTCACTaGGGCTTTCGCGCATGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQRDLGGFLERCCGWLASASRPH*GFRACD Trigger: ATCGCATGCGCGAAAGCCGCAGTGAGGACGTGATGC...AGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCTCTGAGGCCTCTCCGTaGAACAGAAGATTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSICGVWSPRGTQVPVLASEASP*NRRFSS Trigger: AGAGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGA...GGCAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | GGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTCGGTCCATCTCCTTCTaGATCCGGCTCATCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQRDLGGFLERCCGWLASRSISF*IRLITF Trigger: GAAGGTGATGAGCCGGATGCAGAAGGAGATGGACCG...AGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTCTTCCATGTAGCAGGCGTTaGAGCCGGTGCCCACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: QRDLGGFLERCCGWLASLPCSRR*SRCPQS Trigger: TGATTGTGGGCACCGGCTGCAACGCCTGCTACATGG...AAGAGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | CTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGCATCTTCCTTGAAGCTCGGGTaGAGCTTGTACACGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPFRSPRARTLGLYPLASSLKLG*SLYTEP Trigger: TGGCTCCGTGTACAAGCTGCACCCGAGCTTCAAGGA...AGATGCCAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | CAGCAGAATAGGTCTCCTGCCCTAGTGGACTGGGAGCATTTGTGGGGTGTGGAGGCATGCAAGCCTTCTTaGAGGCCACCGCAGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: QQNRSPALVDWEHLWGVEACKPS*RPPQRP Trigger: TGGTCTCTGCGGTGGCCTGCAAGAAGGCTTGCATGC...CTCCACACCCCACAAATGCTCCCAGTCCACTAGGGCAGGAGACCTATTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 ENSMUST00000125434.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGCATCTCCTGGATGCATGCAAGCCTTCTTaGAGGCCACCGCAGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEQGLWASILWHLLDACKPS*RPPQRP Trigger: TGGTCTCTGCGGTGGCCTGCAAGAAGGCTTGCATGC...ATCCAGGAGATGCCAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109822.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGCCTCTTCAGCCACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTGCATGCAAGCCTTCTTaGAGGCCACCGCAGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLFSHRQENSQVWAALTACKPS*RPPQRP Trigger: TGGTCTCTGCGGTGGCCTGCAAGAAGGCTTGCATGC...AGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGGCTGAAGAGGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGCCTTTTCCTTCTTGGTaGCCTCCATCCTGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WCGEGGMASGKPDRDEGQPFPSW*PPSWLC Trigger: ACAGAGCCAGGATGGAGGCCACCAAGAAGGAAAAGG...CTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102920.4 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACGCAACATCTTTACACTaGCCTCCTGATGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGVERAAWHLGNLTGMRDATSLH*PPDGSP Trigger: TGGAGACCCATCAGGAGGCCAGTGTAAAGATGTTGC...GTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCTAGGGCTGTCTCACTGGCTGACTTGGCTTGCAGGGGCCTCTCCCCATTTTGGCGTCCTCGGGGATaGAATACATCTGGTGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SPRAVSLADLACRGLSPFWRPRG*NTSGVS Trigger: CGAAACACCAGATGTATTCCATCCCCGAGGACGCCA...AAATGGGGAGAGGCCCCTGCAAGCCAAGTCAGCCAGTGAGACAGCCCTAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCATGGTTTTGCAGCCTCTTCAGCCACAGGCAAGAAAACAGCCAGGTCTGGCGTGAAACCGCTCCTTaGAGCTCGGGTGCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPWFCSLFSHRQENSQVWRETAP*SSGAAC Trigger: ACAAGCTGCACCCGAGCTTCAAGGAGCGGTTTCACG...CCAGACCTGGCTGTTTTCTTGCCTGTGGCTGAAGAGGCTGCAAAACCATGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | TGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTCTTCCCGGATCACGATGTTGTTCCCTTCTaGTCCGGAGGCCTTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WVVSWRDAVGGLLLFPDHDVVPF*SGGLEA Trigger: GGCTTCAAGGCCTCCGGAGCAGAAGGGAACAACATC...GTGATCCGGGAAGAGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTAACTCTGCCAGGATCTaGTCTACCAGAGTCAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: EGQRDLGGFLERCCGWLANSARI*STRVND Trigger: GTCGTTGACTCTGGTAGAGCAGATCCTGGCAGAGTT...AGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGATGGAACGCACGTAGGTaGGCAACATCTTTACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVERAAWHLGNLTGMRDRWNARR*ATSLHW Trigger: CCAGTGTAAAGATGTTGCCCACCTACGTGCGTTCCA...TCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | AGCCACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCTCTGAGGCCTCTCCGTaGAACAGAAGATTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHRQENSQVWAALTLLGASEASP*NRRFSS Trigger: AGAGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGA...GGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTGAGGCCTCTCCGTaGAACAGAAGATTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGQRDLGGFLERCCGWLASEASP*NRRFSS Trigger: AGAGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGA...AGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAATAGGTCTCCTGCCCTAGTGGACTGGGAGCATTTGTGGGGTGTGGAGGCCGCTGCCCTCCTCTaGTTCAATGAAGGTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQNRSPALVDWEHLWGVEAAALL*FNEGDF Trigger: GAAATCACCTTCATTGAATCAGAGGAGGGCAGCGGC...CTCCACACCCCACAAATGCTCCCAGTCCACTAGGGCAGGAGACCTATTCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 ENSMUST00000125434.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGAACTCTGCCAGGATCTaGTCTACCTTTTCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGAFVGCGVPVEPRSLSLNSARI*STFSFL Trigger: CAAGAAGGAAAAGGTAGAGCAGATCCTGGCAGAGTT...CAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102920.4 |
||
| CDS-3UTR GCA 90 bp | CTCCCATGGTTTTGCAGCCTCTTCAGCCACAGGCAAGAAAACAGCCAGGTCTGGTCCTTGAAGCTCGGGTaGAGCTTGTACACGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPWFCSLFSHRQENSQVWSLKLG*SLYTEP Trigger: TGGCTCCGTGTACAAGCTGCACCCGAGCTTCAAGGA...CCAGACCTGGCTGTTTTCTTGCCTGTGGCTGAAGAGGCTGCAAAACCATGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | GGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTAACTCTGCCAGGATCTaGTCTACCAGAGTCAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: GQRDLGGFLERCCGWLASNSARI*STRVND Trigger: GTCGTTGACTCTGGTAGAGCAGATCCTGGCAGAGTT...AGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGCATCTGCAACATCTTTACACTaGCCTCCTGATGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPFRSPRARTLGLYPLASATSLH*PPDGSP Trigger: TGGAGACCCATCAGGAGGCCAGTGTAAAGATGTTGC...AGATGCCAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | AGCCACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCGGGATGGAATACATCTaGTGTTTCGTCTTCACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHRQENSQVWAALTLLGAGMEYI*CFVFTL Trigger: GAGCGTGAAGACGAAACACCAGATGTATTCCATCCC...GGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | GGGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCGGGATGGAATACATCTaGTGTTTCGTCTTCACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTEGPGWFPGEMLWVACFGMEYI*CFVFTL Trigger: GAGCGTGAAGACGAAACACCAGATGTATTCCATCCC...GAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTGAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATGGGATGGAATACATCTaGTGTTTCGTCTTCACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSEALPFRSPRARTLGLYGMEYI*CFVFTL Trigger: GAGCGTGAAGACGAAACACCAGATGTATTCCATCCC...ATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTCACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGGTTGTCTATGTCTTCGTaGCTTACAGGGAAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGEGGMASGKPDRDEGQRLSMSS*LTGKEK Trigger: CTTCTCCTTCCCTGTAAGGCACGAAGACATAGACAA...CCTCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | AGCCACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCTTGTCTATGTCTTCGTaGCTTACAGGGAAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHRQENSQVWAALTLLGALSMSS*LTGKEK Trigger: CTTCTCCTTCCCTGTAAGGCACGAAGACATAGACAA...GGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTCTTCCCGGATCACGCAACATCTTTACACTaGCCTCCTGATGGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVVSWRDAVGGLLLFPDHATSLH*PPDGSP Trigger: TGGAGACCCATCAGGAGGCCAGTGTAAAGATGTTGC...GTGATCCGGGAAGAGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | CTCCCATGGTTTTGCAGCCTCTTCAGCCACAGGCAAGAAAACAGCCAGGTCTGGTGGCGTCCTCGGGGATaGAATACATCTGGTGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPWFCSLFSHRQENSQVWWRPRG*NTSGVS Trigger: CGAAACACCAGATGTATTCCATCCCCGAGGACGCCA...CCAGACCTGGCTGTTTTCTTGCCTGTGGCTGAAGAGGCTGCAAAACCATGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | CTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGCATCTTTCTTGTGTTTCATCTaGTGCTTGTCCAGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPFRSPRARTLGLYPLASFLCFI*CLSRKS Trigger: TGACTTCCTGGACAAGCATCAGATGAAACACAAGAA...AGATGCCAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAGACCTGAGTGTGCTTCACCTTTCTCTGTAGTTGATTCTAGCAAGAAACCAGTGCGGCTCCCCTaGCGCTGCCCTCCTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: RARPECASPFSVVDSSKKPVRLP*RCPPLI Trigger: AATCAGAGGAGGGCAGCGGCAGGGGAGCCGCACTGG...TTTCTTGCTAGAATCAACTACAGAGAAAGGTGAAGCACACTCAGGTCTTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR TCA 90 bp | CAGCAGAATAGGTCTCCTGCCCTAGTGGACTGGGAGCATTTGTGGGGTGTGGAGTTCTTGTGTTTCATCTaGTGCTTGTCCAGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQNRSPALVDWEHLWGVEFLCFI*CLSRKS Trigger: TGACTTCCTGGACAAGCATCAGATGAAACACAAGAA...CTCCACACCCCACAAATGCTCCCAGTCCACTAGGGCAGGAGACCTATTCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR GCA 90 bp | GGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTCTTCCCGGATCACTGATGTTGTCTATGTCTTCGTaGCTTACAGGGAAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFLERCCGWLASLPGSLMLSMSS*LTGKEK Trigger: CTTCTCCTTCCCTGTAAGGCACGAAGACATAGACAA...CATCAGTGATCCGGGAAGAGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGACCTGAGTGTGCTTCACCTTTCTCTGTAGTTGATTCTAGCAAGAAATGTGGGCGGCGCGAGTaGACACGCTTTCACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RARPECASPFSVVDSSKKCGRRE*TRFHRH Trigger: GTGCCTGTGAAAGCGTGTCCACTCGCGCCGCCCACA...TTTCTTGCTAGAATCAACTACAGAGAAAGGTGAAGCACACTCAGGTCTTGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCCTTGGAGCCTCCCTaGGAGCCCGGGAGGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGAFVGCGVPVEPRSLSLPLEPP*EPGRLE Trigger: CTCCAACCTCCCGGGCTCCAAGGGAGGCTCCAAGGG...CAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125434.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCAGGTCTGGTCTGGCCAAGCTGCAAGCTCGGGTGCAGCTaGTACACGGAGCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GLGSPYSSGGPGLVWPSCKLGCS*YTEPST Trigger: CGTGGATGGCTCCGTGTACAAGCTGCACCCGAGCTT...GCAGCTTGGCCAGACCAGACCTGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS TCA 90 bp | GGCCACCGCAGAGACCAGTGCGGCTCCCCTGCCGCTGCCCTCCTCTaGTTCAATGAAGGTGATTTCGCAGTTGGGTGTCAGCCTGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHRRDQCGSPAAALL*FNEGDFAVGCQPAH Trigger: GTGCGCAGGCTGACACCCAACTGCGAAATCACCTTCATTGAATCAGAGGAGGGCAGCGGCAGGGGAGCCGCACTGGTCTCTGCGGTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 ENSMUST00000125434.2 |
||
| CDS-3UTR CAA 90 bp | CCCCCATGGTTCCAAGCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGGCGCCCCACTCTGTGTaGACACACATGCGCCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPWFQAGVERAAWHLGNLAPHSV*THMRPS Trigger: TGAGGGGCGCATGTGTGTCAACACAGAGTGGGGCGC...CAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGCTTGGAACCATGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS CCA 90 bp | TCGCGCATGCGATTTATGACCCCCGCTAGTCCTGCTGAGCACATGTaGGCGGCGCGAGTGGACACGCTTTCACAGGCACGGCGCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: SRMRFMTPASPAEHM*AARVDTLSQARRTM Trigger: CATTGTGCGCCGTGCCTGTGAAAGCGTGTCCACTCGCGCCGCCCACATGTGCTCAGCAGGACTAGCGGGGGTCATAAATCGCATGCGCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTGAGGCGCTCCCCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATGCGCCCCACTCTGTGTaGACACACATGCGCCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QSEALPFRSPRARTLGLYAPHSV*THMRPS Trigger: TGAGGGGCGCATGTGTGTCAACACAGAGTGGGGCGC...ATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGGGGAGCGCCTCACTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGACAGAGGGACCTGGGTGGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTAAGCTCGGGTGCAGCTaGTACACGGAGCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: EGQRDLGGFLERCCGWLAKLGCS*YTEPST Trigger: CGTGGATGGCTCCGTGTACAAGCTGCACCCGAGCTT...AGCAAGCCACCCACAGCATCTCTCCAGGAAACCACCCAGGTCCCTCTGTCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCACAAAAGCCTGGAGTaGAAAGCCGCGCCCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WEHLWGVESPWNPGPCPCHKSLE*KAAPLE Trigger: CTCCAAGGGCGCGGCTTTCAACTCCAGGCTTTTGTG...GCAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125434.2 |
||
| CDS GCA 90 bp | GCGACAGAGGGTCGAAGGCCCAGAGTGCTCAGGATGTTAAGGATCTaGCTTCGGTCCCCAGAGTCGCTCTCCACCTGCGACACAAAACGG | + |
|
Preference number: 5 (lower is better) Translates to: ATEGRRPRVLRMLRI*LRSPESLSTCDTKR Trigger: CCGTTTTGTGTCGCAGGTGGAGAGCGACTCTGGGGACCGAAGGCAGATCCTTAACATCCTGAGCACTCTGGGCCTTCGACCCTCTGTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCAGAAGTCCCACGATGTaGTTCCCTTCTGCTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WEHLWGVESPWNPGPCPCRSPTM*FPSAPE Trigger: CTCCGGAGCAGAAGGGAACAACATCGTGGGACTTCT...GCAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAAGGTGATTTCGCAGTaGGGTGTCAGCCTGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AGVERAAWHLGNLTGMRDKVISQ*GVSLRT Trigger: TGTGCGCAGGCTGACACCCAACTGCGAAATCACCTT...GTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGAAGGTGATTTCGCAGTaGGGTGTCAGCCTGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LGAFVGCGVPVEPRSLSLKVISQ*GVSLRT Trigger: TGTGCGCAGGCTGACACCCAACTGCGAAATCACCTT...CAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 ENSMUST00000125434.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGAGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGTCTACCTTTTCCTTCTaGGTGGCCTCCATCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGAFVGCGVPVEPRSLSLSTFSF*VASILA Trigger: AGCCAGGATGGAGGCCACCAAGAAGGAAAAGGTAGA...CAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCTCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102920.4 |
||
| CDS-3UTR CAA 90 bp | AGCATTTGTGGGGTGTGGAGTCCCCGTGGAACCCAGGTCCCTGTCCTTGCCTGGAGCATCACCCTGAAGTaGGTTCCTCCCAGGTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SICGVWSPRGTQVPVLAWSITLK*VPPRSK Trigger: CTTAGACCTGGGAGGAACCAACTTCAGGGTGATGCT...CCAGGCAAGGACAGGGACCTGGGTTCCACGGGGACTCCACACCCCACAAATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | CCCATGGTTCCAAGCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAAGGTGATTTCGCAGTaGGGTGTCAGCCTGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PMVPSWCGEGGMASGKPDKVISQ*GVSLRT Trigger: TGTGCGCAGGCTGACACCCAACTGCGAAATCACCTT...GTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGCTTGGAACCATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | CCACAGGCAAGAAAACAGCCAGGTCTGGGCAGCCCTTACTCTTCTGGGGGCCCAAAGGTGATTTCGCAGTaGGGTGTCAGCCTGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PQARKQPGLGSPYSSGGPKVISQ*GVSLRT Trigger: TGTGCGCAGGCTGACACCCAACTGCGAAATCACCTT...TGGGCCCCCAGAAGAGTAAGGGCTGCCCAGACCTGGCTGTTTTCTTGCCTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS GCA 90 bp | CGCTCTCCACCTGCGACACAAAACGGGTCTCAAAAGCACCACGTGTaGGCAGCTGCTCTGAGGCCTCTCCGTGGAACAGAAGATTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSPPATQNGSQKHHV*AAALRPLRGTEDSP Trigger: AGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGAGCAGCTGCGCACACGTGGTGCTTTTGAGACCCGTTTTGTGTCGCAGGTGGAGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGAGCATCACCCTGAAGTaGGTTCCTCCCAGGTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: WCGEGGMASGKPDRDEGQSITLK*VPPRSK Trigger: CTTAGACCTGGGAGGAACCAACTTCAGGGTGATGCT...CTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAAGTCCCCTCTCCTCTaGATAGCATCTCGGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGVERAAWHLGNLTGMRDKSPLL*IASRRS Trigger: ACTTCTCCGAGATGCTATCAAGAGGAGAGGGGACTT...GTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTGGAGAGGGCGGCATGGCATCTGGGAAACCTGACAGGGATGAGGGACAGACATGCCGACCTCACATaGGCGGTCTTCATAGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVERAAWHLGNLTGMRDRHADLT*AVFIVA Trigger: TGCTACTATGAAGACCGCCAATGTGAGGTCGGCATG...TCTGTCCCTCATCCCTGTCAGGTTTCCCAGATGCCATGCCGCCCTCTCCACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | GGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTCTTCCCGGATCACTGATGAAGCTCGGGTGCAGCTaGTACACGGAGCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GFLERCCGWLASLPGSLMKLGCS*YTEPST Trigger: CGTGGATGGCTCCGTGTACAAGCTGCACCCGAGCTT...CATCAGTGATCCGGGAAGAGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 90 bp | CGCAGTTGGGTGTCAGCCTGCGCACACTGGCGTGAAACCGCTCCTTaGAGCCCAGACTGCAGTATATATTCAGTATTCCAGGCCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSWVSACAHWRETAP*SPDCSIYSVFQAQG Trigger: TCCCTGGGCCTGGAATACTGAATATATACTGCAGTCTGGGCTTCAAGGAGCGGTTTCACGCCAGTGTGCGCAGGCTGACACCCAACTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125434.2 |
||
| CDS GCA 90 bp | ACCTGCGACACAAAACGGGTCTCAAAAGCACCACGTGTGCGCAGCTaGTCTGAGGCCTCTCCGTGGAACAGAAGATTCTCCTCTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TCDTKRVSKAPRVRS*SEASPWNRRFSSTS Trigger: GCTGGTAGAGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGAGCAGCTGCGCACACGTGGTGCTTTTGAGACCCGTTTTGTGTCGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS CCA 90 bp | AGTCAAAGAGCATCTCCGCAGTGCCCGTCATGGCGTCCTCGGGGATaGAATACATCTGGTGTTTCGTCTTCACGCTCCACTGTCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SQRASPQCPSWRPRG*NTSGVSSSRSTVLP Trigger: AGGCAGGACAGTGGAGCGTGAAGACGAAACACCAGATGTATTCCATCCCCGAGGACGCCATGACGGGCACTGCGGAGATGCTCTTTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | CCTTCAGGTCCCCTAGAGCAAGGACTCTGGGCCTCTATCCTCTGGCATCTCCTGAGCATCACCCTGAAGTaGGTTCCTCCCAGGTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSGPLEQGLWASILWHLLSITLK*VPPRSK Trigger: CTTAGACCTGGGAGGAACCAACTTCAGGGTGATGCT...CAGGAGATGCCAGAGGATAGAGGCCCAGAGTCCTTGCTCTAGGGGACCTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109822.8 |
||
| CDS TCA 90 bp | CTTTCCGCCAATGATCTTTTCGTACAGCTGCTGACCGGGGTTCACTaGGCTCTCATCCACCATCCGGTCGTACTCCAGGAGGAACTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSANDLFVQLLTGVH*ALIHHPVVLQEELV Trigger: GACGAGTTCCTCCTGGAGTACGACCGGATGGTGGATGAGAGCTCAGTGAACCCCGGTCAGCAGCTGTACGAAAAGATCATTGGCGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 90 bp | AGCTCGCCCATGTACTTTCCGCCAATGATCTTTTCGTACAGCTGCTaGCCGGGGTTCACTGAGCTCTCATCCACCATCCGGTCGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPMYFPPMIFSYSC*PGFTELSSTIRSYS Trigger: GGAGTACGACCGGATGGTGGATGAGAGCTCAGTGAACCCCGGTCAGCAGCTGTACGAAAAGATCATTGGCGGAAAGTACATGGGCGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 90 bp | GCTCTGAGGCCTCTCCGTGGAACAGAAGATTCTCCTCTACCAGCTTaGGCAGCACAAGTCGTACCAGCTCGCCCATGTACTTTCCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALRPLRGTEDSPLPA*AAQVVPARPCTFRQ Trigger: TTGGCGGAAAGTACATGGGCGAGCTGGTACGACTTGTGCTGCTCAAGCTGGTAGAGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 90 bp | CGACACAAAACGGGTCTCAAAAGCACCACGTGTGCGCAGCTGCTCTaGGGCCTCTCCGTGGAACAGAAGATTCTCCTCTACCAGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHKTGLKSTTCAQLL*GLSVEQKILLYQLE Trigger: CTCAAGCTGGTAGAGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGAGCAGCTGCGCACACGTGGTGCTTTTGAGACCCGTTTTGTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS CCA 90 bp | GTCTCAAAAGCACCACGTGTGCGCAGCTGCTCTGAGGCCTCTCCGTaGAACAGAAGATTCTCCTCTACCAGCTTGAGCAGCACAAGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VSKAPRVRSCSEASP*NRRFSSTSLSSTSR Trigger: ACGACTTGTGCTGCTCAAGCTGGTAGAGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGAGCAGCTGCGCACACGTGGTGCTTTTGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS GCA 90 bp | ATCTCCTTCTGCATCCGGCTCATCACCTTCTTCAGGTCTTCCTCCTaGAGCTGGAACTCTGCCAGGATCTGCTCTACCAGAGTCAACGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISFCIRLITFFRSSS*SWNSARICSTRVND Trigger: GTCGTTGACTCTGGTAGAGCAGATCCTGGCAGAGTTCCAGCTGCAGGAGGAAGACCTGAAGAAGGTGATGAGCCGGATGCAGAAGGAGAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS CCA 90 bp | GAAAGTCTCCAACTTCTGAGCCTTCTGGGGTGGAACGCACGTAGGTaGGCAACATCTTTACACTGGCCTCCTGATGGGTCTCCAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ESLQLLSLLGWNARR*ATSLHWPPDGSPAS Trigger: TGAAGCTGGAGACCCATCAGGAGGCCAGTGTAAAGATGTTGCCCACCTACGTGCGTTCCACCCCAGAAGGCTCAGAAGTTGGAGACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS-3UTR CAA 90 bp | GGTTTCCTGGAGAGATGCTGTGGGTGGCTTGCTTCTCTTCCCGGATCACTGATGCATGCCGACCTCACATaGGCGGTCTTCATAGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFLERCCGWLASLPGSLMHADLT*AVFIVA Trigger: TGCTACTATGAAGACCGCCAATGTGAGGTCGGCATG...CATCAGTGATCCGGGAAGAGAAGCAAGCCACCCACAGCATCTCTCCAGGAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS GCA 90 bp | ATCTCCTTCTGCATCCGGCTCATCACCTTCTTCAGGTCTTCCTCCTaGAGCTGGAACTCTGCCAGGATCTGCTCTACCTTTTCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISFCIRLITFFRSSS*SWNSARICSTFSFL Trigger: CAAGAAGGAAAAGGTAGAGCAGATCCTGGCAGAGTTCCAGCTGCAGGAGGAAGACCTGAAGAAGGTGATGAGCCGGATGCAGAAGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102920.4 |
||
| CDS TCA 90 bp | GGATGCCCTTGTCTATGTCTTCGTGCCTTACAGGGAAGGAGAAGGTaGAGCCCAGGGGTAGTTTCTTGTGTTTCATCTGATGCTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCPCLCLRALQGRRR*SPGVVSCVSSDACP Trigger: TGGACAAGCATCAGATGAAACACAAGAAACTACCCCTGGGCTTCACCTTCTCCTTCCCTGTAAGGCACGAAGACATAGACAAGGGCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 90 bp | ATGAAGGTGATTTCGCAGTTGGGTGTCAGCCTGCGCACACTGGCGTaGAACCGCTCCTTGAAGCCCAGACTGCAGTATATATTCAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: MKVISQLGVSLRTLA*NRSLKPRLQYIFSI Trigger: AATACTGAATATATACTGCAGTCTGGGCTTCAAGGAGCGGTTTCACGCCAGTGTGCGCAGGCTGACACCCAACTGCGAAATCACCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125434.2 |
||
| CDS-3UTR CAA 90 bp | GTATATGAAGGAGACTGTCTCTGGAATGTTTGTGGCCTGGAAAGTCCCCTCCATAAGTCCCCTCTCCTCTaGATAGCATCTCGGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VYEGDCLWNVCGLESPLHKSPLL*IASRRS Trigger: ACTTCTCCGAGATGCTATCAAGAGGAGAGGGGACTT...ATGGAGGGGACTTTCCAGGCCACAAACATTCCAGAGACAGTCTCCTTCATATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102920.4 ENSMUST00000109823.9 |
||
| CDS GCA 90 bp | GTAGTTTCTTGTGTTTCATCTGATGCTTGTCCAGGAAGTCAGAGATaGACTCAGAGATGTAGTCAAAGAGCATCTCCGCAGTGCCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VVSCVSSDACPGSQR*TQRCSQRASPQCPS Trigger: TGACGGGCACTGCGGAGATGCTCTTTGACTACATCTCTGAGTGCATCTCTGACTTCCTGGACAAGCATCAGATGAAACACAAGAAACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS CCA 72 bp | CCGCTAGTCCTGCTGAGCACATGTGGGCGGCGCGAGTaGACACGCTTTCACAGGCACGGCGCACAATGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PLVLLSTCGRRE*TRFHRHGAQCR Trigger: GCGACATTGTGCGCCGTGCCTGTGAAAGCGTGTCCACTCGCGCCGCCCACATGTGCTCAGCAGGACTAGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS CAA 72 bp | TCGGCTCACAAAAGCCTGGAGTTGAAAGCCGCGCCCTaGGAGCCTCCCTTGGAGCCCGGGAGGTTGGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SAHKSLELKAAP*EPPLEPGRLER Trigger: GCGCTCCAACCTCCCGGGCTCCAAGGGAGGCTCCAAGGGCGCGGCTTTCAACTCCAGGCTTTTGTGAGCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125434.2 |
||
| CDS TCA 72 bp | TCACGTCCTCACTGCGGCTTTCGCGCATGCGATTTATaGCCCCCGCTAGTCCTGCTGAGCACATGTGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRPHCGFRACDL*PPLVLLSTCGR Trigger: CCGCCCACATGTGCTCAGCAGGACTAGCGGGGGTCATAAATCGCATGCGCGAAAGCCGCAGTGAGGACGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS GCA 72 bp | GGTCGAAGGCCCAGAGTGCTCAGGATGTTAAGGATCTaGCTTCGGTCCCCAGAGTCGCTCTCCACCTGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: GRRPRVLRMLRI*LRSPESLSTCD Trigger: GTCGCAGGTGGAGAGCGACTCTGGGGACCGAAGGCAGATCCTTAACATCCTGAGCACTCTGGGCCTTCGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS CCA 72 bp | GCACCACGTGTGCGCAGCTGCTCTGAGGCCTCTCCGTaGAACAGAAGATTCTCCTCTACCAGCTTGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: APRVRSCSEASP*NRRFSSTSLSS Trigger: GCTGCTCAAGCTGGTAGAGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGAGCAGCTGCGCACACGTGGTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 72 bp | ATTTCGCAGTTGGGTGTCAGCCTGCGCACACTGGCGTaGAACCGCTCCTTGAAGCTCGGGTGCAGCTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ISQLGVSLRTLA*NRSLKLGCSLY Trigger: GTACAAGCTGCACCCGAGCTTCAAGGAGCGGTTTCACGCCAGTGTGCGCAGGCTGACACCCAACTGCGAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 72 bp | AGAGACCAGTGCGGCTCCCCTGCCGCTGCCCTCCTCTaGTTCAATGAAGGTGATTTCGCAGTTGGGTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RDQCGSPAAALL*FNEGDFAVGCQ Trigger: CTGACACCCAACTGCGAAATCACCTTCATTGAATCAGAGGAGGGCAGCGGCAGGGGAGCCGCACTGGTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 ENSMUST00000125434.2 |
||
| CDS GCA 72 bp | TGGGTCTCCAGCTTCAGGCCACGGTCCATCTCCTTCTaGATCCGGCTCATCACCTTCTTCAGGTCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WVSSFRPRSISF*IRLITFFRSSS Trigger: GGAGGAAGACCTGAAGAAGGTGATGAGCCGGATGCAGAAGGAGATGGACCGTGGCCTGAAGCTGGAGACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS GCA 72 bp | AGGTCTTCCTCCTGCAGCTGGAACTCTGCCAGGATCTaGTCTACCAGAGTCAACGACTGGGCTCCCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSSSCSWNSARI*STRVNDWAPLL Trigger: AAGGAGGGGAGCCCAGTCGTTGACTCTGGTAGAGCAGATCCTGGCAGAGTTCCAGCTGCAGGAGGAAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 72 bp | ACGGGTCTCAAAAGCACCACGTGTGCGCAGCTGCTCTaGGGCCTCTCCGTGGAACAGAAGATTCTCCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: TGLKSTTCAQLL*GLSVEQKILLY Trigger: GTAGAGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGAGCAGCTGCGCACACGTGGTGCTTTTGAGACCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS CAA 90 bp | TGCTCTGAGGCCTCTCCGTGGAACAGAAGATTCTCCTCTACCAGCTaGAGCAGCACAAGTCGTACCAGCTCGCCCATGTACTTTCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSEASPWNRRFSSTS*SSTSRTSSPMYFPP Trigger: TGGCGGAAAGTACATGGGCGAGCTGGTACGACTTGTGCTGCTCAAGCTGGTAGAGGAGAATCTTCTGTTCCACGGAGAGGCCTCAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS GCA 72 bp | ACAAAACGGGTCTCAAAAGCACCACGTGTGCGCAGCTaGTCTGAGGCCTCTCCGTGGAACAGAAGATTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TKRVSKAPRVRS*SEASPWNRRFS Trigger: GGAGAATCTTCTGTTCCACGGAGAGGCCTCAGAGCAGCTGCGCACACGTGGTGCTTTTGAGACCCGTTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS CCA 72 bp | CAACTTCTGAGCCTTCTGGGGTGGAACGCACGTAGGTaGGCAACATCTTTACACTGGCCTCCTGATGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QLLSLLGWNARR*ATSLHWPPDGS Trigger: AGACCCATCAGGAGGCCAGTGTAAAGATGTTGCCCACCTACGTGCGTTCCACCCCAGAAGGCTCAGAAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS CAA 72 bp | GCCTCTCCGTGGAACAGAAGATTCTCCTCTACCAGCTaGAGCAGCACAAGTCGTACCAGCTCGCCCATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ASPWNRRFSSTS*SSTSRTSSPMY Trigger: GTACATGGGCGAGCTGGTACGACTTGTGCTGCTCAAGCTGGTAGAGGAGAATCTTCTGTTCCACGGAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 72 bp | AATGATCTTTTCGTACAGCTGCTGACCGGGGTTCACTaGGCTCTCATCCACCATCCGGTCGTACTCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: NDLFVQLLTGVH*ALIHHPVVLQE Trigger: CTCCTGGAGTACGACCGGATGGTGGATGAGAGCTCAGTGAACCCCGGTCAGCAGCTGTACGAAAAGATCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 72 bp | CAAGTCGTACCAGCTCGCCCATGTACTTTCCGCCAATaGTCTTTTCGTACAGCTGCTGACCGGGGTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: QVVPARPCTFRQ*SFRTAADRGSL Trigger: CAGTGAACCCCGGTCAGCAGCTGTACGAAAAGATCATTGGCGGAAAGTACATGGGCGAGCTGGTACGACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 72 bp | CCTCTCCGTGGAACAGAAGATTCTCCTCTACCAGCTTaGGCAGCACAAGTCGTACCAGCTCGCCCATGTACT | + |
|
Preference number: 6 (lower is better) Translates to: PLRGTEDSPLPA*AAQVVPARPCT Trigger: AGTACATGGGCGAGCTGGTACGACTTGTGCTGCTCAAGCTGGTAGAGGAGAATCTTCTGTTCCACGGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 72 bp | ATTTCGCAGTTGGGTGTCAGCCTGCGCACACTGGCGTaGAACCGCTCCTTGAAGCCCAGACTGCAGTATATA | + |
|
Preference number: 6 (lower is better) Translates to: ISQLGVSLRTLA*NRSLKPRLQYI Trigger: TATATACTGCAGTCTGGGCTTCAAGGAGCGGTTTCACGCCAGTGTGCGCAGGCTGACACCCAACTGCGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125434.2 |
||
| CDS CCA 72 bp | AGATGTAGTCAAAGAGCATCTCCGCAGTGCCCGTCATaGCGTCCTCGGGGATGGAATACATCTGGTGTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RCSQRASPQCPS*RPRGWNTSGVS Trigger: CGAAACACCAGATGTATTCCATCCCCGAGGACGCCATGACGGGCACTGCGGAGATGCTCTTTGACTACATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
||
| CDS TCA 72 bp | GTGTCAGCCTGCGCACACTGGCGTGAAACCGCTCCTTaGAGCCCAGACTGCAGTATATATTCAGTATTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VSACAHWRETAP*SPDCSIYSVFQ Trigger: CTGGAATACTGAATATATACTGCAGTCTGGGCTTCAAGGAGCGGTTTCACGCCAGTGTGCGCAGGCTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125434.2 |
||
| CDS TCA 72 bp | AAGGTGAAGCCCAGGGGTAGTTTCTTGTGTTTCATCTaGTGCTTGTCCAGGAAGTCAGAGATGCACTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: KVKPRGSFLCFI*CLSRKSEMHSE Trigger: CTCTGAGTGCATCTCTGACTTCCTGGACAAGCATCAGATGAAACACAAGAAACTACCCCTGGGCTTCACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102920.4 ENSMUST00000109822.8 ENSMUST00000109823.9 |
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