Pregenerated sensors for GCH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037580Ensembl transcript IDs: ENSMUST00000089959.7
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAACGGCCACAGCATGGCCTGTCCAGAGCAGTGGGCACAGCTCCCTaGCCTCCCTCATCATCCTATGCTCTCGGCAGTTGTGAGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: QRPQHGLSRAVGTAP*PPSSSYALGSCEEL Trigger: CAGCTCCTCACAACTGCCGAGAGCATAGGATGATGAGGGAGGCCAGGGAGCTGTGCCCACTGCTCTGGACAGGCCATGCTGTGGCCGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 90 bp | AGTCCTCTGTGCACCAACGGCCACAGCATGGCCTGTCCAGAGCAGTaGGCACAGCTCCCTGGCCTCCCTCATCATCCTATGCTCTCGGCA | + |
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Preference number: 1 (lower is better) Translates to: SPLCTNGHSMACPEQ*AQLPGLPHHPMLSA Trigger: TGCCGAGAGCATAGGATGATGAGGGAGGCCAGGGAGCTGTGCCCACTGCTCTGGACAGGCCATGCTGTGGCCGTTGGTGCACAGAGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR TCA 90 bp | ACCAAATGCATGCGTTCCCCCTCCTCCCAGCATCCCTGGGGGCTCTaGATGGCAGCAGTCGCTGTGGATAGCCTATACTCCTGGCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: TKCMRSPSSQHPWGL*MAAVAVDSLYSWQF Trigger: GAACTGCCAGGAGTATAGGCTATCCACAGCGACTGCTGCCATTCAGAGCCCCCAGGGATGCTGGGAGGAGGGGGAACGCATGCATTTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 90 bp | AATGCATGCGTTCCCCCTCCTCCCAGCATCCCTGGGGGCTCTGAATaGCAGCAGTCGCTGTGGATAGCCTATACTCCTGGCAGTTCACTT | + |
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Preference number: 1 (lower is better) Translates to: NACVPPPPSIPGGSE*QQSLWIAYTPGSSL Trigger: AAGTGAACTGCCAGGAGTATAGGCTATCCACAGCGACTGCTGCCATTCAGAGCCCCCAGGGATGCTGGGAGGAGGGGGAACGCATGCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR GCA 90 bp | ACAAGGCACACACCAACAAGAAAAGAACTAGACCGAAGTCCTCTGTaGACCAACGGCCACAGCATGGCCTGTCCAGAGCAGTGGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: TRHTPTRKELDRSPL*TNGHSMACPEQWAQ Trigger: CTGTGCCCACTGCTCTGGACAGGCCATGCTGTGGCCGTTGGTGCACAGAGGACTTCGGTCTAGTTCTTTTCTTGTTGGTGTGTGCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 90 bp | GTCCCTGGTAGCTTCACATACATGATCAAAACAGAGTGGTGTCTGTaGGCCTCTGAACACAGAGGGCAATGCTCTCTGAACCCCTCACCA | + |
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Preference number: 1 (lower is better) Translates to: VPGSFTYMIKTEWCL*ASEHRGQCSLNPSP Trigger: TGGTGAGGGGTTCAGAGAGCATTGCCCTCTGTGTTCAGAGGCCCACAGACACCACTCTGTTTTGATCATGTATGTGAAGCTACCAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 90 bp | AGCCTATACTCCTGGCAGTTCACTTTAACATTGCCACTAAGACGGTaGCGAGAAGAAAGCGGAAGCTCACCCTTAGTTGATCACCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: SLYSWQFTLTLPLRR*REESGSSPLVDHLY Trigger: ATAAAGGTGATCAACTAAGGGTGAGCTTCCGCTTTCTTCTCGCCACCGTCTTAGTGGCAATGTTAAAGTGAACTGCCAGGAGTATAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCACTGCCCCAGTGGAGGACATGGTAACTGGTACGTAGCCACACTTCTCGGAGTGGCCATGGCTCCTTaGATGCCCAGTGCCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PHCPSGGHGNWYVATLLGVAMAP*MPSALC Trigger: GCAGAGGGCACTGGGCATTCAAGGAGCCATGGCCAC...TCCGAGAAGTGTGGCTACGTACCAGTTACCATGTCCTCCACTGGGGCAGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR TCA 90 bp | TGTCCAGAGCAGTGGGCACAGCTCCCTGGCCTCCCTCATCATCCTATGCTCTCGGTGTCTGTGGGCCTCTaGACACAGAGGGCAATGCTC | + |
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Preference number: 2 (lower is better) Translates to: CPEQWAQLPGLPHHPMLSVSVGL*TQRAML Trigger: GAGCATTGCCCTCTGTGTTCAGAGGCCCACAGACAC...CGAGAGCATAGGATGATGAGGGAGGCCAGGGAGCTGTGCCCACTGCTCTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR TCA 90 bp | AGAACTAGACCGAAGTCCTCTGTGCACCAACGGCCACAGCATGGCCTGTCCAGATGCTCTCGGCAGTTGTaGGGAGCTGGGAACCCACAG | + |
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Preference number: 2 (lower is better) Translates to: RTRPKSSVHQRPQHGLSRCSRQL*GAGNPQ Trigger: CTGTGGGTTCCCAGCTCCTCACAACTGCCGAGAGCA...TCTGGACAGGCCATGCTGTGGCCGTTGGTGCACAGAGGACTTCGGTCTAGTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR TCA 90 bp | ACACAGAGGGCAATGCTCTCTGAACCCCTCACCATCTCCAGCACTCCAACGTTACATCCCTGGGGGCTCTaGATGGCAGCAGTCGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: TQRAMLSEPLTISSTPTLHPWGL*MAAVAV Trigger: CACAGCGACTGCTGCCATTCAGAGCCCCCAGGGATG...TAACGTTGGAGTGCTGGAGATGGTGAGGGGTTCAGAGAGCATTGCCCTCTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR CCA 90 bp | CGTAGCCACACTTCTCGGACAGCTACACCTCTGGACACACTTGTACTGAAGACAGCCTGTCCAGAGCAGTaGGCACAGCTCCCTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: RSHTSRTATPLDTLVLKTACPEQ*AQLPGL Trigger: GAGGCCAGGGAGCTGTGCCCACTGCTCTGGACAGGC...TGTCTTCAGTACAAGTGTGTCCAGAGGTGTAGCTGTCCGAGAAGTGTGGCTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR TCA 90 bp | AGAACTAGACCGAAGTCCTCTGTGCACCAACGGCCACAGCATGGCCTGTCCAGAGCTCTCCAAATGGTGTaGTATTCTCACCAAGGCACC | + |
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Preference number: 2 (lower is better) Translates to: RTRPKSSVHQRPQHGLSRALQMV*YSHQGT Trigger: GGTGCCTTGGTGAGAATATCACACCATTTGGAGAGC...TCTGGACAGGCCATGCTGTGGCCGTTGGTGCACAGAGGACTTCGGTCTAGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR CCA 90 bp | AGAACTAGACCGAAGTCCTCTGTGCACCAACGGCCACAGCATGGCCTGTCCAGAATGATCAAAACAGAGTaGTGTCTGTGGGCCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: RTRPKSSVHQRPQHGLSRMIKTE*CLWASE Trigger: TTCAGAGGCCCACAGACACCACTCTGTTTTGATCAT...TCTGGACAGGCCATGCTGTGGCCGTTGGTGCACAGAGGACTTCGGTCTAGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CAA 90 bp | GCAGTCGCTGTGGATAGCCTATACTCCTGGCAGTTCACTTTAACATaGCCACTAAGACGGTGGCGAGAAGAAAGCGGAAGCTCACCCTTA | + |
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Preference number: 2 (lower is better) Translates to: AVAVDSLYSWQFTLT*PLRRWREESGSSPL Trigger: TAAGGGTGAGCTTCCGCTTTCTTCTCGCCACCGTCTTAGTGGCAATGTTAAAGTGAACTGCCAGGAGTATAGGCTATCCACAGCGACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCACTGCCCCAGTGGAGGACATGGTAACTGGTACGTAGCCACACTTCTCGGACTAAATGCACGTAGCTaGCATGAGAATAAACTACTG | + |
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Preference number: 2 (lower is better) Translates to: PHCPSGGHGNWYVATLLGLNARS*HENKLL Trigger: CAGTAGTTTATTCTCATGTCAGCTACGTGCATTTAG...TCCGAGAAGTGTGGCTACGTACCAGTTACCATGTCCTCCACTGGGGCAGTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CAA 90 bp | CTTCTTACAGGAGATCAGCCATGTGCCGAGTCAGTACTTATAAACTaGAGAAGTAACGGCTGTCCGAAAGGATGGCGGAAGTACCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LLTGDQPCAESVLIN*RSNGCPKGWRKYLL Trigger: GAGCAGGTACTTCCGCCATCCTTTCGGACAGCCGTTACTTCTCAAGTTTATAAGTACTGACTCGGCACATGGCTGATCTCCTGTAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CAA 90 bp | CCTACACAGACGCTGATGAGAACACAGCCTGGAGATGTCAGGCATTaGTTAAGAACACTTCTAGAGAATGACCCAACAGGGTCGTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: PTQTLMRTQPGDVRH*LRTLLENDPTGSFR Trigger: TCTGAACGACCCTGTTGGGTCATTCTCTAGAAGTGTTCTTAACAAATGCCTGACATCTCCAGGCTGTGTTCTCATCAGCGTCTGTGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR GCA 90 bp | CATGGAATAGACAAAGTAAACTCCCAAGAACTTCTTACAGGAGATCAGCCATGTTGTCAACCAAATGCATaGGTTCCCCCTCCTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: HGIDKVNSQELLTGDQPCCQPNA*VPPPPS Trigger: GCTGGGAGGAGGGGGAACGCATGCATTTGGTTGACA...ACATGGCTGATCTCCTGTAAGAAGTTCTTGGGAGTTTACTTTGTCTATTCCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR GCA 90 bp | CATGGAATAGACAAAGTAAACTCCCAAGAACTTCTTACAGGAGATCAGCCATGTCCATGGCTCCTTGAATaGCCAGTGCCCTCTGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: HGIDKVNSQELLTGDQPCPWLLE*PVPSAN Trigger: ATTAGCAGAGGGCACTGGGCATTCAAGGAGCCATGG...ACATGGCTGATCTCCTGTAAGAAGTTCTTGGGAGTTTACTTTGTCTATTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCAGAGGGAGAACTCTTCATTGTAACAGCTATGATGATTGTGTTTTTGCAATTATGTCAACCAAATaGATGCGTTCCCCCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SARGRTLHCNSYDDCVFAIMSTK*MRSPSS Trigger: GGAGGAGGGGGAACGCATGCATTTGGTTGACATAAT...TGCAAAAACACAATCATCATAGCTGTTACAATGAAGAGTTCTCCCTCTGGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR CCA 90 bp | TTGTTAACTTTAAAATACCAAGCACAGGCTACGTACTTAGCATTCTACCTAGAAACAGAGTGGTGTCTGTaGGCCTCTGAACACAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LLTLKYQAQATYLAFYLETEWCL*ASEHRG Trigger: CCCTCTGTGTTCAGAGGCCCACAGACACCACTCTGT...TTCTAGGTAGAATGCTAAGTACGTAGCCTGTGCTTGGTATTTTAAAGTTAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR CCA 90 bp | TTGTTAACTTTAAAATACCAAGCACAGGCTACGTACTTAGCATTCTACCTAGAATGCTGCGATTTGATTTaGCCCTCACTGCCCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLTLKYQAQATYLAFYLECCDLI*PSLPQW Trigger: CCACTGGGGCAGTGAGGGCCAAATCAAATCGCAGCA...TTCTAGGTAGAATGCTAAGTACGTAGCCTGTGCTTGGTATTTTAAAGTTAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCAGAGGGAGAACTCTTCATTGTAACAGCTATGATGATTGTGTTTTTGCAAAGCTCACCCTTAGTTaGTCACCTTTATTTGACGTA | + |
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Preference number: 2 (lower is better) Translates to: SARGRTLHCNSYDDCVFAKLTLS*SPLFDV Trigger: TACGTCAAATAAAGGTGATCAACTAAGGGTGAGCTT...TGCAAAAACACAATCATCATAGCTGTTACAATGAAGAGTTCTCCCTCTGGCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGCAGGTTAACACTGCTATCAGGTTAGATTTCAAAGGAAACTCAAAATCATACCTGCTCTCCAAATaGTGTGATATTCTCACCAAG | + |
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Preference number: 2 (lower is better) Translates to: AKQVNTAIRLDFKGNSKSYLLSK*CDILTK Trigger: CTTGGTGAGAATATCACACCATTTGGAGAGCAGGTA...TGATTTTGAGTTTCCTTTGAAATCTAACCTGATAGCAGTGTTAACCTGCTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 72 bp | GTTCCCCCTCCTCCCAGCATCCCTGGGGGCTCTGAATaGCAGCAGTCGCTGTGGATAGCCTATACTCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: VPPPPSIPGGSE*QQSLWIAYTPG Trigger: GCCAGGAGTATAGGCTATCCACAGCGACTGCTGCCATTCAGAGCCCCCAGGGATGCTGGGAGGAGGGGGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR TCA 72 bp | ATGCGTTCCCCCTCCTCCCAGCATCCCTGGGGGCTCTaGATGGCAGCAGTCGCTGTGGATAGCCTATACTCC | + |
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Preference number: 3 (lower is better) Translates to: MRSPSSQHPWGL*MAAVAVDSLYS Trigger: GGAGTATAGGCTATCCACAGCGACTGCTGCCATTCAGAGCCCCCAGGGATGCTGGGAGGAGGGGGAACGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 72 bp | CCTCATCATCCTATGCTCTCGGCAGTTGTGAGGAGCTaGGAACCCACAGAGCTGACTGAGCGGCAGTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: PHHPMLSAVVRS*EPTELTERQFQ Trigger: TTGGAACTGCCGCTCAGTCAGCTCTGTGGGTTCCCAGCTCCTCACAACTGCCGAGAGCATAGGATGATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 72 bp | TTTGGCCCTCACTGCCCCAGTGGAGGACATGGTAACTaGTACGTAGCCACACTTCTCGGACAGCTACACCTC | + |
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Preference number: 3 (lower is better) Translates to: FGPHCPSGGHGN*YVATLLGQLHL Trigger: GAGGTGTAGCTGTCCGAGAAGTGTGGCTACGTACCAGTTACCATGTCCTCCACTGGGGCAGTGAGGGCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR TCA 72 bp | GTCTGTGGGCCTCTGAACACAGAGGGCAATGCTCTCTaGACCCCTCACCATCTCCAGCACTCCAACGTTAGA | + |
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Preference number: 3 (lower is better) Translates to: VCGPLNTEGNAL*TPHHLQHSNVR Trigger: TCTAACGTTGGAGTGCTGGAGATGGTGAGGGGTTCAGAGAGCATTGCCCTCTGTGTTCAGAGGCCCACAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR GCA 72 bp | ACCCCTCACCATCTCCAGCACTCCAACGTTAGACTATaGCCACTGGAGGCAGCAAACAGCATAGTGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: TPHHLQHSNVRL*PLEAANSIVAM Trigger: CATGGCCACTATGCTGTTTGCTGCCTCCAGTGGGCATAGTCTAACGTTGGAGTGCTGGAGATGGTGAGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR GCA 72 bp | ACACCAACAAGAAAAGAACTAGACCGAAGTCCTCTGTaGACCAACGGCCACAGCATGGCCTGTCCAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: TPTRKELDRSPL*TNGHSMACPEQ Trigger: CTGCTCTGGACAGGCCATGCTGTGGCCGTTGGTGCACAGAGGACTTCGGTCTAGTTCTTTTCTTGTTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR TCA 72 bp | GGCAGTTGTGAGGAGCTGGGAACCCACAGAGCTGACTaGGCGGCAGTTCCAAAAGATCCTGGAAATAATTGC | + |
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Preference number: 3 (lower is better) Translates to: GSCEELGTHRAD*AAVPKDPGNNC Trigger: GCAATTATTTCCAGGATCTTTTGGAACTGCCGCTCAGTCAGCTCTGTGGGTTCCCAGCTCCTCACAACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 72 bp | TGTCCGAAAGGATGGCGGAAGTACCTGCTCTCCAAATaGTGTGATATTCTCACCAAGGCACCGAGTCAACCC | + |
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Preference number: 3 (lower is better) Translates to: CPKGWRKYLLSK*CDILTKAPSQP Trigger: GGGTTGACTCGGTGCCTTGGTGAGAATATCACACCATTTGGAGAGCAGGTACTTCCGCCATCCTTTCGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR TCA 72 bp | ATACATGATCAAAACAGAGTGGTGTCTGTGGGCCTCTaGACACAGAGGGCAATGCTCTCTGAACCCCTCACC | + |
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Preference number: 3 (lower is better) Translates to: IHDQNRVVSVGL*TQRAMLSEPLT Trigger: GGTGAGGGGTTCAGAGAGCATTGCCCTCTGTGTTCAGAGGCCCACAGACACCACTCTGTTTTGATCATGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 72 bp | GTCCCTGGTAGCTTCACATACATGATCAAAACAGAGTaGTGTCTGTGGGCCTCTGAACACAGAGGGCAATGC | + |
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Preference number: 3 (lower is better) Translates to: VPGSFTYMIKTE*CLWASEHRGQC Trigger: GCATTGCCCTCTGTGTTCAGAGGCCCACAGACACCACTCTGTTTTGATCATGTATGTGAAGCTACCAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR TCA 72 bp | TCCTTGAATGCCCAGTGCCCTCTGCTAATGAGTCAGTaGTTATGTCAACCAAATGCATGCGTTCCCCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SLNAQCPLLMSQ*LCQPNACVPPP Trigger: AGGAGGGGGAACGCATGCATTTGGTTGACATAATCACTGACTCATTAGCAGAGGGCACTGGGCATTCAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR TCA 72 bp | AATGTACTCGGTGTCATGGATGTGAGAAGGTCACTTTaGAACACTTCAGACGAGCCTGAGACAGACGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: NVLGVMDVRRSL*NTSDEPETDEA Trigger: AGCCTCGTCTGTCTCAGGCTCGTCTGAAGTGTTTCAAAGTGACCTTCTCACATCCATGACACCGAGTACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 72 bp | TCCTGGCAGTTCACTTTAACATTGCCACTAAGACGGTaGCGAGAAGAAAGCGGAAGCTCACCCTTAGTTGAT | + |
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Preference number: 3 (lower is better) Translates to: SWQFTLTLPLRR*REESGSSPLVD Trigger: ATCAACTAAGGGTGAGCTTCCGCTTTCTTCTCGCCACCGTCTTAGTGGCAATGTTAAAGTGAACTGCCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 72 bp | AGCTTCACATACATGATCAAAACAGAGTGGTGTCTGTaGGCCTCTGAACACAGAGGGCAATGCTCTCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: SFTYMIKTEWCL*ASEHRGQCSLN Trigger: GTTCAGAGAGCATTGCCCTCTGTGTTCAGAGGCCCACAGACACCACTCTGTTTTGATCATGTATGTGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR CCA 72 bp | GGCTACCCCTACACAGACGCTGATGAGAACACAGCCTaGAGATGTCAGGCATTTGTTAAGAACACTTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: GYPYTDADENTA*RCQAFVKNTSR Trigger: TCTAGAAGTGTTCTTAACAAATGCCTGACATCTCCAGGCTGTGTTCTCATCAGCGTCTGTGTAGGGGTAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCAGAGGGAGAACTCTTCATTGTAACAGCTATGATGATTGTGTTTTTGCACAGTTCACTTTAACATaGCCACTAAGACGGTGGCGA | + |
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Preference number: 3 (lower is better) Translates to: SARGRTLHCNSYDDCVFAQFTLT*PLRRWR Trigger: TCGCCACCGTCTTAGTGGCAATGTTAAAGTGAACTG...TGCAAAAACACAATCATCATAGCTGTTACAATGAAGAGTTCTCCCTCTGGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR TCA 72 bp | ATAAAGAAGAAAATGTCCCTGGTAGCTTCACATACATaGTCAAAACAGAGTGGTGTCTGTGGGCCTCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: IKKKMSLVASHT*SKQSGVCGPLN Trigger: GTTCAGAGGCCCACAGACACCACTCTGTTTTGATCATGTATGTGAAGCTACCAGGGACATTTTCTTCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| 3UTR TCA 72 bp | TTCATGATGAGACATAAAGTTCACAAGTGTACCAACTaGAACTGGAATGTACGACTGAGACAGATAACAGCC | + |
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Preference number: 3 (lower is better) Translates to: FMMRHKVHKCTN*NWNVRLRQITA Trigger: GGCTGTTATCTGTCTCAGTCGTACATTCCAGTTTCAGTTGGTACACTTGTGAACTTTATGTCTCATCATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| CDS-3UTR TCA 90 bp | CCCCCTCCTCCCAGCATCCCTGGGGGCTCTGAATGGCAGCAGTCGCTGTGGATACCCTCCAGGGCGTCTTaGGCAGCCCCTGCCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PPPPSIPGGSEWQQSLWIPSRAS*AAPAAG Trigger: CCCAGCGGCAGGGGCTGCTCAAGACGCCCTGGAGGG...TATCCACAGCGACTGCTGCCATTCAGAGCCCCCAGGGATGCTGGGAGGAGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| CDS-3UTR GCA 90 bp | CCCCCTCCTCCCAGCATCCCTGGGGGCTCTGAATGGCAGCAGTCGCTGTGGATACCCTTGGTGAAGTACTaGATGGCGGTGGCCGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PPPPSIPGGSEWQQSLWIPLVKY*MAVAAL Trigger: GAGGGCGGCCACCGCCATGCAGTACTTCACCAAGGG...TATCCACAGCGACTGCTGCCATTCAGAGCCCCCAGGGATGCTGGGAGGAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| CDS-3UTR CCA 90 bp | AACACTTCAGACGAGCCTGAGACAGACGAGGCTACCCCTACACAGACGCTGATGAGTACTGCATGGCGGTaGCCGCCCTCCAGGGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: NTSDEPETDEATPTQTLMSTAWR*PPSRAS Trigger: AGACGCCCTGGAGGGCGGCCACCGCCATGCAGTACT...CATCAGCGTCTGTGTAGGGGTAGCCTCGTCTGTCTCAGGCTCGTCTGAAGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| CDS-3UTR TCA 90 bp | ACACAGAGGGCAATGCTCTCTGAACCCCTCACCATCTCCAGCACTCCAACGTTAACCCATTGGTGCACCTaGCTCCCCGCGGCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TQRAMLSEPLTISSTPTLTHWCT*LPAASP Trigger: TGGAGAAGCCGCGGGGAGTCAGGTGCACCAATGGGT...TAACGTTGGAGTGCTGGAGATGGTGAGGGGTTCAGAGAGCATTGCCCTCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| CDS-3UTR CCA 90 bp | AGAACTAGACCGAAGTCCTCTGTGCACCAACGGCCACAGCATGGCCTGTCCAGATTGGGGAGGTTCACCTaGTTTTCCTCCTCGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RTRPKSSVHQRPQHGLSRLGRFT*FSSSLR Trigger: CCGCAGCGAGGAGGAAAACCAGGTGAACCTCCCCAA...TCTGGACAGGCCATGCTGTGGCCGTTGGTGCACAGAGGACTTCGGTCTAGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR TCA 90 bp | AACACTTCAGACGAGCCTGAGACAGACGAGGCTACCCCTACACAGACGCTGATGGCTGCAAGGCTTCTGTaGTGGCCACCGCAATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTSDEPETDEATPTQTLMAARLL*WPPQSV Trigger: AACAGATTGCGGTGGCCATCACAGAAGCCTTGCAGC...CATCAGCGTCTGTGTAGGGGTAGCCTCGTCTGTCTCAGGCTCGTCTGAAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR GCA 90 bp | CGTAGCCACACTTCTCGGACAGCTACACCTCTGGACACACTTGTACTGAAGACACCAACGCCAGCAGGCTaGAAGGCTTCTGTGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSHTSRTATPLDTLVLKTPTPAG*KASVMA Trigger: GGCCATCACAGAAGCCTTGCAGCCTGCTGGCGTTGG...TGTCTTCAGTACAAGTGTGTCCAGAGGTGTAGCTGTCCGAGAAGTGTGGCTACG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR GCA 90 bp | CCTCACTGCCCCAGTGGAGGACATGGTAACTGGTACGTAGCCACACTTCTCGGACGCCTCGCATTACCATaGACATGTGTGTCGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PHCPSGGHGNWYVATLLGRLALP*TCVSLQ Trigger: TTGAAGCGACACACATGTGCATGGTAATGCGAGGCG...TCCGAGAAGTGTGGCTACGTACCAGTTACCATGTCCTCCACTGGGGCAGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR TCA 90 bp | ATGCCCACTGGAGGCAGCAAACAGCATAGTGGCCATGGCTCCTTGAATGCCCAGACAAATGGAACAAGGTaGTGCTCACACATGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MPTGGSKQHSGHGSLNAQTNGTR*CSHMEN Trigger: GTTCTCCATGTGTGAGCATCACCTTGTTCCATTTGT...CTGGGCATTCAAGGAGCCATGGCCACTATGCTGTTTGCTGCCTCCAGTGGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR GCA 90 bp | GCAAAGCAGGTTAACACTGCTATCAGGTTAGATTTCAAAGGAAACTCAAAATCAGTCTTGAGCAGCCCCTaGCGCTGGGGGTCCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKQVNTAIRLDFKGNSKSVLSSP*RWGSSP Trigger: GGGCGAGGACCCCCAGCGGCAGGGGCTGCTCAAGAC...TGATTTTGAGTTTCCTTTGAAATCTAACCTGATAGCAGTGTTAACCTGCTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGGGCAATGCTCTCTGAACCCCTCACCATCTCCAGCACTCCAACGTTATCTGAGATGGTCTCCTaGTATCCCTTGGTGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TQRAMLSEPLTISSTPTLSEMVS*YPLVKY Trigger: GTACTTCACCAAGGGATACCAGGAGACCATCTCAGA...TAACGTTGGAGTGCTGGAGATGGTGAGGGGTTCAGAGAGCATTGCCCTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR CCA 90 bp | CCTCACTGCCCCAGTGGAGGACATGGTAACTGGTACGTAGCCACACTTCTCGGAGGTGATGCTCACACATaGAGAACATATCTATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHCPSGGHGNWYVATLLGGDAHT*RTYLCP Trigger: AGGACATAGATATGTTCTCCATGTGTGAGCATCACC...TCCGAGAAGTGTGGCTACGTACCAGTTACCATGTCCTCCACTGGGGCAGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR CCA 90 bp | GAAGAAAATGTCCCTGGTAGCTTCACATACATGATCAAAACAGAGTGGTGTCTGACTCCTCCCGAGTCTTaGGGTCTTCCCGGAACACGC | + |
|
Preference number: 4 (lower is better) Translates to: EENVPGSFTYMIKTEWCLTPPES*GLPGTR Trigger: GCGTGTTCCGGGAAGACCCCAAGACTCGGGAGGAGT...CAGACACCACTCTGTTTTGATCATGTATGTGAAGCTACCAGGGACATTTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| 3UTR CAA 72 bp | GTGGATAGCCTATACTCCTGGCAGTTCACTTTAACATaGCCACTAAGACGGTGGCGAGAAGAAAGCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VDSLYSWQFTLT*PLRRWREESGS Trigger: GCTTCCGCTTTCTTCTCGCCACCGTCTTAGTGGCAATGTTAAAGTGAACTGCCAGGAGTATAGGCTATCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| 3UTR CAA 72 bp | GGAGATCAGCCATGTGCCGAGTCAGTACTTATAAACTaGAGAAGTAACGGCTGTCCGAAAGGATGGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDQPCAESVLIN*RSNGCPKGWRK Trigger: CTTCCGCCATCCTTTCGGACAGCCGTTACTTCTCAAGTTTATAAGTACTGACTCGGCACATGGCTGATCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR GCA 90 bp | CGTAGCCACACTTCTCGGACAGCTACACCTCTGGACACACTTGTACTGAAGACATTGCTGTTCATTTTCTaGACGCCTCGCATTACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSHTSRTATPLDTLVLKTLLFIF*TPRITM Trigger: CATGGTAATGCGAGGCGTGCAGAAAATGAACAGCAA...TGTCTTCAGTACAAGTGTGTCCAGAGGTGTAGCTGTCCGAGAAGTGTGGCTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR CCA 90 bp | TCAGCCAGAGGGAGAACTCTTCATTGTAACAGCTATGATGATTGTGTTTTTGCAAAGCGGCCGCCAGTTTaGGGAGGTTCACCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SARGRTLHCNSYDDCVFAKRPPV*GGSPGF Trigger: AAAACCAGGTGAACCTCCCCAAACTGGCGGCCGCTT...TGCAAAAACACAATCATCATAGCTGTTACAATGAAGAGTTCTCCCTCTGGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| 3UTR CAA 72 bp | ACGCTGATGAGAACACAGCCTGGAGATGTCAGGCATTaGTTAAGAACACTTCTAGAGAATGACCCAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLMRTQPGDVRH*LRTLLENDPTG Trigger: CCCTGTTGGGTCATTCTCTAGAAGTGTTCTTAACAAATGCCTGACATCTCCAGGCTGTGTTCTCATCAGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR CCA 90 bp | TCAGCCAGAGGGAGAACTCTTCATTGTAACAGCTATGATGATTGTGTTTTTGCATCAGGACATCTGAGATaGTCTCCTGGTATCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SARGRTLHCNSYDDCVFASGHLR*SPGIPW Trigger: CCAAGGGATACCAGGAGACCATCTCAGATGTCCTGA...TGCAAAAACACAATCATCATAGCTGTTACAATGAAGAGTTCTCCCTCTGGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR TCA 90 bp | TCAGCCAGAGGGAGAACTCTTCATTGTAACAGCTATGATGATTGTGTTTTTGCAATCATTCAGGACATCTaGGATGGTCTCCTGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: SARGRTLHCNSYDDCVFAIIQDI*DGLLVS Trigger: GGATACCAGGAGACCATCTCAGATGTCCTGAATGAT...TGCAAAAACACAATCATCATAGCTGTTACAATGAAGAGTTCTCCCTCTGGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR TCA 90 bp | GCAAAGCAGGTTAACACTGCTATCAGGTTAGATTTCAAAGGAAACTCAAAATCATCCTGGCAAGTTTACTaGGACCAAGGACTTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKQVNTAIRLDFKGNSKSSWQVY*DQGLAC Trigger: ACAAGCAAGTCCTTGGTCTCAGTAAACTTGCCAGGA...TGATTTTGAGTTTCCTTTGAAATCTAACCTGATAGCAGTGTTAACCTGCTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR TCA 90 bp | GCAAAGCAGGTTAACACTGCTATCAGGTTAGATTTCAAAGGAAACTCAAAATCAATCACCATCTCGTCATaGTCTTCATCAAATATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQVNTAIRLDFKGNSKSITISS*SSSNIA Trigger: TGCTATATTTGATGAAGATCATGACGAGATGGTGAT...TGATTTTGAGTTTCCTTTGAAATCTAACCTGATAGCAGTGTTAACCTGCTTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 90 bp | TTTGGGGAGGTTCACCTGGTTTTCCTCCTCGCTGCGGTGCCGCCCTaGCTTCCAGGCGTCGGCCGGCTGTGCGCCCTTGGCCTCGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: FGEVHLVFLLAAVPP*LPGVGRLCALGLGR Trigger: CCGCCCGAGGCCAAGGGCGCACAGCCGGCCGACGCCTGGAAGGCAGGGCGGCACCGCAGCGAGGAGGAAAACCAGGTGAACCTCCCCAAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 90 bp | GCCGCCAGTTTGGGGAGGTTCACCTGGTTTTCCTCCTCGCTGCGGTaGCGCCCTGCCTTCCAGGCGTCGGCCGGCTGTGCGCCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AASLGRFTWFSSSLR*RPAFQASAGCAPLA Trigger: GGCCAAGGGCGCACAGCCGGCCGACGCCTGGAAGGCAGGGCGGCACCGCAGCGAGGAGGAAAACCAGGTGAACCTCCCCAAACTGGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 90 bp | AAGCGGCCGCCAGTTTGGGGAGGTTCACCTGGTTTTCCTCCTCGCTaGGGTGCCGCCCTGCCTTCCAGGCGTCGGCCGGCTGTGCGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KRPPVWGGSPGFPPR*GAALPSRRRPAVRP Trigger: AGGGCGCACAGCCGGCCGACGCCTGGAAGGCAGGGCGGCACCGCAGCGAGGAGGAAAACCAGGTGAACCTCCCCAAACTGGCGGCCGCTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CCA 90 bp | CCTCGCCCAGCGAGAGCAGAATGGACGAGTAAGCGGCCGCCAGTTTaGGGAGGTTCACCTGGTTTTCCTCCTCGCTGCGGTGCCGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRPARAEWTSKRPPV*GGSPGFPPRCGAAL Trigger: CAGGGCGGCACCGCAGCGAGGAGGAAAACCAGGTGAACCTCCCCAAACTGGCGGCCGCTTACTCGTCCATTCTGCTCTCGCTGGGCGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 90 bp | TTCAGGACATCTGAGATGGTCTCCTGGTATCCCTTGGTGAAGTACTaGATGGCGGTGGCCGCCCTCCAGGGCGTCTTGAGCAGCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FRTSEMVSWYPLVKY*MAVAALQGVLSSPC Trigger: GCAGGGGCTGCTCAAGACGCCCTGGAGGGCGGCCACCGCCATGCAGTACTTCACCAAGGGATACCAGGAGACCATCTCAGATGTCCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR CAA 90 bp | ATGCCCACTGGAGGCAGCAAACAGCATAGTGGCCATGGCTCCTTGAATGCCCAGAACTCCTCCCGAGTCTaGGGGTCTTCCCGGAACACG | + |
|
Preference number: 5 (lower is better) Translates to: MPTGGSKQHSGHGSLNAQNSSRV*GSSRNT Trigger: CGTGTTCCGGGAAGACCCCAAGACTCGGGAGGAGTT...CTGGGCATTCAAGGAGCCATGGCCACTATGCTGTTTGCTGCCTCCAGTGGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR CAA 90 bp | CCCCCTCCTCCCAGCATCCCTGGGGGCTCTGAATGGCAGCAGTCGCTGTGGATAGTGCTAGTGACAGTCTaGCTGTTCATTTTCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: PPPPSIPGGSEWQQSLWIVLVTV*LFIFCT Trigger: CGTGCAGAAAATGAACAGCAAGACTGTCACTAGCAC...TATCCACAGCGACTGCTGCCATTCAGAGCCCCCAGGGATGCTGGGAGGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGGGCAATGCTCTCTGAACCCCTCACCATCTCCAGCACTCCAACGTTAGTCTCCTGGTATCCCTaGGTGAAGTACTGCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TQRAMLSEPLTISSTPTLVSWYP*VKYCMA Trigger: CGCCATGCAGTACTTCACCAAGGGATACCAGGAGAC...TAACGTTGGAGTGCTGGAGATGGTGAGGGGTTCAGAGAGCATTGCCCTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR CAA 90 bp | GCAAAGCAGGTTAACACTGCTATCAGGTTAGATTTCAAAGGAAACTCAAAATCAGCCCTCCAGGGCGTCTaGAGCAGCCCCTGCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AKQVNTAIRLDFKGNSKSALQGV*SSPCRW Trigger: CCAGCGGCAGGGGCTGCTCAAGACGCCCTGGAGGGC...TGATTTTGAGTTTCCTTTGAAATCTAACCTGATAGCAGTGTTAACCTGCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 90 bp | AACACGCCCAGCATGGTGCTAGTGACAGTCTTGCTGTTCATTTTCTaGACGCCTCGCATTACCATGCACATGTGTGTCGCTTCAATCACT | + |
|
Preference number: 5 (lower is better) Translates to: NTPSMVLVTVLLFIF*TPRITMHMCVASIT Trigger: AGTGATTGAAGCGACACACATGTGCATGGTAATGCGAGGCGTGCAGAAAATGAACAGCAAGACTGTCACTAGCACCATGCTGGGCGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS-3UTR CAA 90 bp | CATGGAATAGACAAAGTAAACTCCCAAGAACTTCTTACAGGAGATCAGCCATGTACTGAGACCAAGGACTaGCTTGTTAGGAAGATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGIDKVNSQELLTGDQPCTETKD*LVRKIA Trigger: GGCTATCTTCCTAACAAGCAAGTCCTTGGTCTCAGT...ACATGGCTGATCTCCTGTAAGAAGTTCTTGGGAGTTTACTTTGTCTATTCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CCA 90 bp | CAATATGGACCCTTCCTACAAATGGAACAAGGTGATGCTCACACATaGAGAACATATCTATGTCCTTCACAATCACCATCTCGTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: QYGPFLQMEQGDAHT*RTYLCPSQSPSRHD Trigger: ATCATGACGAGATGGTGATTGTGAAGGACATAGATATGTTCTCCATGTGTGAGCATCACCTTGTTCCATTTGTAGGAAGGGTCCATATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS TCA 90 bp | CACATGGAGAACATATCTATGTCCTTCACAATCACCATCTCGTCATaGTCTTCATCAAATATAGCATCATTCAGGACATCTGAGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HMENISMSFTITISS*SSSNIASFRTSEMV Trigger: GACCATCTCAGATGTCCTGAATGATGCTATATTTGATGAAGATCATGACGAGATGGTGATTGTGAAGGACATAGATATGTTCTCCATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CAA 90 bp | CTGCGGTGCCGCCCTGCCTTCCAGGCGTCGGCCGGCTGTGCGCCCTaGGCCTCGGGCGGCCGGGACTTCTCGGCAGGCGGGCTGGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LRCRPAFQASAGCAP*ASGGRDFSAGGLAP Trigger: CGGGGCCAGCCCGCCTGCCGAGAAGTCCCGGCCGCCCGAGGCCAAGGGCGCACAGCCGGCCGACGCCTGGAAGGCAGGGCGGCACCGCAG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 72 bp | GCGGTGCCGCCCTGCCTTCCAGGCGTCGGCCGGCTGTaGGCCCTTGGCCTCGGGCGGCCGGGACTTCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AVPPCLPGVGRL*ALGLGRPGLLG Trigger: GCCGAGAAGTCCCGGCCGCCCGAGGCCAAGGGCGCACAGCCGGCCGACGCCTGGAAGGCAGGGCGGCACCGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CAA 72 bp | CGCCCTGCCTTCCAGGCGTCGGCCGGCTGTGCGCCCTaGGCCTCGGGCGGCCGGGACTTCTCGGCAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPAFQASAGCAP*ASGGRDFSAGG Trigger: CCCGCCTGCCGAGAAGTCCCGGCCGCCCGAGGCCAAGGGCGCACAGCCGGCCGACGCCTGGAAGGCAGGGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS TCA 72 bp | AGTACTGCATGGCGGTGGCCGCCCTCCAGGGCGTCTTaGGCAGCCCCTGCCGCTGGGGGTCCTCGCCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: STAWRWPPSRAS*AAPAAGGPRPA Trigger: CGCTGGGCGAGGACCCCCAGCGGCAGGGGCTGCTCAAGACGCCCTGGAGGGCGGCCACCGCCATGCAGTACT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CAA 72 bp | AAGTACTGCATGGCGGTGGCCGCCCTCCAGGGCGTCTaGAGCAGCCCCTGCCGCTGGGGGTCCTCGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KYCMAVAALQGV*SSPCRWGSSPS Trigger: GCTGGGCGAGGACCCCCAGCGGCAGGGGCTGCTCAAGACGCCCTGGAGGGCGGCCACCGCCATGCAGTACTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 72 bp | GTTCACCTGGTTTTCCTCCTCGCTGCGGTGCCGCCCTaGCTTCCAGGCGTCGGCCGGCTGTGCGCCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VHLVFLLAAVPP*LPGVGRLCALG Trigger: GCCAAGGGCGCACAGCCGGCCGACGCCTGGAAGGCAGGGCGGCACCGCAGCGAGGAGGAAAACCAGGTGAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CAA 90 bp | CCCTTGGTGAAGTACTGCATGGCGGTGGCCGCCCTCCAGGGCGTCTaGAGCAGCCCCTGCCGCTGGGGGTCCTCGCCCAGCGAGAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PLVKYCMAVAALQGV*SSPCRWGSSPSESR Trigger: TCTGCTCTCGCTGGGCGAGGACCCCCAGCGGCAGGGGCTGCTCAAGACGCCCTGGAGGGCGGCCACCGCCATGCAGTACTTCACCAAGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 72 bp | TTGGGGAGGTTCACCTGGTTTTCCTCCTCGCTGCGGTaGCGCCCTGCCTTCCAGGCGTCGGCCGGCTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LGRFTWFSSSLR*RPAFQASAGCA Trigger: CGCACAGCCGGCCGACGCCTGGAAGGCAGGGCGGCACCGCAGCGAGGAGGAAAACCAGGTGAACCTCCCCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 72 bp | CCAGTTTGGGGAGGTTCACCTGGTTTTCCTCCTCGCTaGGGTGCCGCCCTGCCTTCCAGGCGTCGGCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PVWGGSPGFPPR*GAALPSRRRPA Trigger: AGCCGGCCGACGCCTGGAAGGCAGGGCGGCACCGCAGCGAGGAGGAAAACCAGGTGAACCTCCCCAAACTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS TCA 72 bp | TCAGGACATCTGAGATGGTCTCCTGGTATCCCTTGGTaGAGTACTGCATGGCGGTGGCCGCCCTCCAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SGHLRWSPGIPW*STAWRWPPSRA Trigger: CGCCCTGGAGGGCGGCCACCGCCATGCAGTACTTCACCAAGGGATACCAGGAGACCATCTCAGATGTCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 72 bp | TCTGAGATGGTCTCCTGGTATCCCTTGGTGAAGTACTaGATGGCGGTGGCCGCCCTCCAGGGCGTCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SEMVSWYPLVKY*MAVAALQGVLS Trigger: GCTCAAGACGCCCTGGAGGGCGGCCACCGCCATGCAGTACTTCACCAAGGGATACCAGGAGACCATCTCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CCA 72 bp | GCGAGAGCAGAATGGACGAGTAAGCGGCCGCCAGTTTaGGGAGGTTCACCTGGTTTTCCTCCTCGCTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: ARAEWTSKRPPV*GGSPGFPPRCG Trigger: ACCGCAGCGAGGAGGAAAACCAGGTGAACCTCCCCAAACTGGCGGCCGCTTACTCGTCCATTCTGCTCTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CAA 72 bp | CAGCTCCTGATTAGTGTGAGGAACTCCTCCCGAGTCTaGGGGTCTTCCCGGAACACGCCCAGCATGGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: QLLISVRNSSRV*GSSRNTPSMVL Trigger: TAGCACCATGCTGGGCGTGTTCCGGGAAGACCCCAAGACTCGGGAGGAGTTCCTCACACTAATCAGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CAA 72 bp | TCATTCAGGACATCTGAGATGGTCTCCTGGTATCCCTaGGTGAAGTACTGCATGGCGGTGGCCGCCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SFRTSEMVSWYP*VKYCMAVAALQ Trigger: CTGGAGGGCGGCCACCGCCATGCAGTACTTCACCAAGGGATACCAGGAGACCATCTCAGATGTCCTGAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CAA 72 bp | TCCCGGAACACGCCCAGCATGGTGCTAGTGACAGTCTaGCTGTTCATTTTCTGCACGCCTCGCATTACCATG | + |
|
Preference number: 6 (lower is better) Translates to: SRNTPSMVLVTV*LFIFCTPRITM Trigger: CATGGTAATGCGAGGCGTGCAGAAAATGAACAGCAAGACTGTCACTAGCACCATGCTGGGCGTGTTCCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS CAA 90 bp | TTGGGGTCTTCCCGGAACACGCCCAGCATGGTGCTAGTGACAGTCTaGCTGTTCATTTTCTGCACGCCTCGCATTACCATGCACATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGSSRNTPSMVLVTV*LFIFCTPRITMHMC Trigger: ACACATGTGCATGGTAATGCGAGGCGTGCAGAAAATGAACAGCAAGACTGTCACTAGCACCATGCTGGGCGTGTTCCGGGAAGACCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
||
| CDS GCA 72 bp | AGCATGGTGCTAGTGACAGTCTTGCTGTTCATTTTCTaGACGCCTCGCATTACCATGCACATGTGTGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: SMVLVTVLLFIF*TPRITMHMCVA Trigger: AGCGACACACATGTGCATGGTAATGCGAGGCGTGCAGAAAATGAACAGCAAGACTGTCACTAGCACCATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| CDS CAA 72 bp | TTCTACAATCCTGGCAAGTTTACTGAGACCAAGGACTaGCTTGTTAGGAAGATAGCCAATATGGACCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FYNPGKFTETKD*LVRKIANMDPS Trigger: GGAAGGGTCCATATTGGCTATCTTCCTAACAAGCAAGTCCTTGGTCTCAGTAAACTTGCCAGGATTGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| CDS CCA 72 bp | GTTAGGAAGATAGCCAATATGGACCCTTCCTACAAATaGAACAAGGTGATGCTCACACATGGAGAACATATC | + |
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Preference number: 6 (lower is better) Translates to: VRKIANMDPSYK*NKVMLTHGEHI Trigger: GATATGTTCTCCATGTGTGAGCATCACCTTGTTCCATTTGTAGGAAGGGTCCATATTGGCTATCTTCCTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| CDS CAA 90 bp | ACTGTAGATTTCTACAATCCTGGCAAGTTTACTGAGACCAAGGACTaGCTTGTTAGGAAGATAGCCAATATGGACCCTTCCTACAAATGG | + |
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Preference number: 6 (lower is better) Translates to: TVDFYNPGKFTETKD*LVRKIANMDPSYKW Trigger: CCATTTGTAGGAAGGGTCCATATTGGCTATCTTCCTAACAAGCAAGTCCTTGGTCTCAGTAAACTTGCCAGGATTGTAGAAATCTACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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| CDS TCA 72 bp | AACATATCTATGTCCTTCACAATCACCATCTCGTCATaGTCTTCATCAAATATAGCATCATTCAGGACATCT | + |
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Preference number: 6 (lower is better) Translates to: NISMSFTITISS*SSSNIASFRTS Trigger: AGATGTCCTGAATGATGCTATATTTGATGAAGATCATGACGAGATGGTGATTGTGAAGGACATAGATATGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089959.7 |
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