Pregenerated sensors for GCFC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035125Ensembl transcript IDs: ENSMUST00000043195.11, ENSMUST00000152996.8, ENSMUST00000203959.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGACTCTGGGCACTCCCACACGGCGCACTCAAACACCTGTACTCTaGGCTGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCG | + |
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Preference number: 1 (lower is better) Translates to: LTLGTPTRRTQTPVL*AGRGSRGRSSLRDS Trigger: CGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCAGCCCAGAGTACAGGTGTTTGAGTGCGCCGTGTGGGAGTGCCCAGAGTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR TCA 90 bp | CGTGGTCTCATGAAGCCCCAGCTGGCCCGCAGCTCACTGGGTCTGTaGGACGAATCACCAGGTGAGTGTGTGCACCTGTTGTGTCAGCGC | + |
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Preference number: 1 (lower is better) Translates to: RGLMKPQLARSSLGL*DESPGECVHLLCQR Trigger: GCGCTGACACAACAGGTGCACACACTCACCTGGTGATTCGTCTCACAGACCCAGTGAGCTGCGGGCCAGCTGGGGCTTCATGAGACCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR CCA 90 bp | TGCTGCTGTGCATTACTTCCCTCAGCTACGAAGCATCAGGAGGCCTaGCCACACCCCAAGTGGGCACCCAGCAAAGGCGGCATCGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: CCCALLPSATKHQEA*PHPKWAPSKGGIGC Trigger: ACAGCCGATGCCGCCTTTGCTGGGTGCCCACTTGGGGTGTGGCCAGGCCTCCTGATGCTTCGTAGCTGAGGGAAGTAATGCACAGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| 3UTR TCA 90 bp | GTGGTTGTGAGCCACCTGGTGTGGGTGCTGGGAAGGGAATGCCACTaGGTCTGTCCAGTCTCTGAGACACACACAGGTCTCCCGATAGAC | + |
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Preference number: 1 (lower is better) Translates to: VVVSHLVWVLGRECH*VCPVSETHTGLPID Trigger: GTCTATCGGGAGACCTGTGTGTGTCTCAGAGACTGGACAGACTCAGTGGCATTCCCTTCCCAGCACCCACACCAGGTGGCTCACAACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR CCA 90 bp | GCCCACAACCTCCTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTaGCCCCTACATGGAGGTAGTGCTAAACCCACCCAGGTACATACA | + |
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Preference number: 1 (lower is better) Translates to: AHNLLDSSSRGPDAL*PLHGGSAKPTQVHT Trigger: TGTATGTACCTGGGTGGGTTTAGCACTACCTCCATGTAGGGGCCAGAGGGCATCAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| 3UTR CCA 90 bp | GGACCTGGGTTTGGTTCCAAGCACATTAGATGGCCCACAACCTCCTaGATTCCAGTTCCAGGGGACCTGATGCCCTCTGGCCCCTACATG | + |
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Preference number: 1 (lower is better) Translates to: GPGFGSKHIRWPTTS*IPVPGDLMPSGPYM Trigger: CATGTAGGGGCCAGAGGGCATCAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGCCATCTAATGTGCTTGGAACCAAACCCAGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| 3UTR CCA 90 bp | CCAGTCTCTGAGACACACACAGGTCTCCCGATAGACCTGTCTGTGTaGGTGGGTAGAAAGGGCCCTAGGCTGTTCTCCTGTATGCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: PVSETHTGLPIDLSV*VGRKGPRLFSCMLH Trigger: ATGAAGCATACAGGAGAACAGCCTAGGGCCCTTTCTACCCACCCACACAGACAGGTCTATCGGGAGACCTGTGTGTGTCTCAGAGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR CCA 90 bp | ATGGACAGTGAAAGTTTGTTGTTTCTGGTTCTTAAGTTTTTGTCGTaGTCTCATGAAGCCCCAGCTGGCCCGCAGCTCACTGGGTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: MDSESLLFLVLKFLS*SHEAPAGPQLTGSV Trigger: CACAGACCCAGTGAGCTGCGGGCCAGCTGGGGCTTCATGAGACCACGACAAAAACTTAAGAACCAGAAACAACAAACTTTCACTGTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR CCA 90 bp | CATAGTAGGAATCAGGAAACTTTTCTCGCCACTGCTTGGCACTTGTaGAAGTTAGTCATCTCTGCAGGAGACAGCTCATCATCACTAGAC | + |
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Preference number: 1 (lower is better) Translates to: HSRNQETFLATAWHL*KLVISAGDSSSSLD Trigger: GTCTAGTGATGATGAGCTGTCTCCTGCAGAGATGACTAACTTCCACAAGTGCCAAGCAGTGGCGAGAAAAGTTTCCTGATTCCTACTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR TCA 90 bp | TGTCTTCTCTGCATCCTCCGAGCTTCAATCTCTTCTAAAATCCGTTaGTCCTTTTCATCCACAGCCAAGCTTCCATTTGCCGATGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: CLLCILRASISSKIR*SFSSTAKLPFADVS Trigger: TGAGACATCGGCAAATGGAAGCTTGGCTGTGGATGAAAAGGATCAACGGATTTTAGAAGAGATTGAAGCTCGGAGGATGCAGAGAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR CCA 90 bp | TTCGGAAGAGCTTTAGAGCTCCCCAGAACTGTCTTTCTTGGAACTTaGAGTGTGGTGACATTTTTCCTTCTTCAGAGCTCTTTGGGTATA | + |
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Preference number: 1 (lower is better) Translates to: FGRALELPRTVFLGT*SVVTFFLLQSSLGI Trigger: TATACCCAAAGAGCTCTGAAGAAGGAAAAATGTCACCACACTCCAAGTTCCAAGAAAGACAGTTCTGGGGAGCTCTAAAGCTCTTCCGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR TCA 90 bp | TCTAGACCTATGGAGTCCATCTTAAGAGGATTCCAGTCAAGCAACTaGACTCGTATCAGGGGACTTAAAAGCTTTGGTAAGCAGAAACCA | + |
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Preference number: 1 (lower is better) Translates to: SRPMESILRGFQSSN*TRIRGLKSFGKQKP Trigger: TGGTTTCTGCTTACCAAAGCTTTTAAGTCCCCTGATACGAGTTCAGTTGCTTGACTGGAATCCTCTTAAGATGGACTCCATAGGTCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR GCA 90 bp | ACGTCCATCTCGAAGAAGCCAAGGCCAGAGAACAGTTTCCAAAAGTaGCCTTTAACAGCAAAAATAAAGTCTCTGCCATTTATATACAAA | + |
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Preference number: 1 (lower is better) Translates to: TSISKKPRPENSFQK*PLTAKIKSLPFIYK Trigger: TTTGTATATAAATGGCAGAGACTTTATTTTTGCTGTTAAAGGGCACTTTTGGAAACTGTTCTCTGGCCTTGGCTTCTTCGAGATGGACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| 3UTR CCA 90 bp | AATTTCTGTGCAGACTGCAACAAAAACTTAATGAAGTTTTCTAGCTaGGGAATTGATGTCCTCATAGCAGAGTTCTCAAACCATCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: NFCADCNKNLMKFSS*GIDVLIAEFSNHLS Trigger: AGAAAGATGGTTTGAGAACTCTGCTATGAGGACATCAATTCCCCAGCTAGAAAACTTCATTAAGTTTTTGTTGCAGTCTGCACAGAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR TCA 90 bp | CTGCACACATATACACATGCTTTTGTAACGAGCAAATGTCTAAAGTaGCAACACGGAAAAATAAATACAGGATCATCATTGAGTTGCTTA | + |
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Preference number: 1 (lower is better) Translates to: LHTYTHAFVTSKCLK*QHGKINTGSSLSCL Trigger: TAAGCAACTCAATGATGATCCTGTATTTATTTTTCCGTGTTGTCACTTTAGACATTTGCTCGTTACAAAAGCATGTGTATATGTGTGCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTGGCCCCTACATGGAGGTAGTACCTGTACTCTGGGCTaGGAGGGGCTCCAGGGGACG | + |
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Preference number: 2 (lower is better) Translates to: LDSSSRGPDALWPLHGGSTCTLG*EGLQGT Trigger: CGTCCCCTGGAGCCCCTCCCAGCCCAGAGTACAGGT...ACTACCTCCATGTAGGGGCCAGAGGGCATCAGGTCCCCTGGAACTGGAATCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTGGCCCCTACATGGAGGTAGTCCTGATGGTCACAGCTaGCCGAGAGCTCCCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LDSSSRGPDALWPLHGGSPDGHS*PRAPWP Trigger: AGGCCAGGGAGCTCTCGGGCAGCTGTGACCATCAGG...ACTACCTCCATGTAGGGGCCAGAGGGCATCAGGTCCCCTGGAACTGGAATCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGGACGGCATTAGTAAGAGAGATGATAAGGTAGCGATTCAGCAGCTTCCCAAGCATCAGGAGGCCTaGCCACACCCCAAGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SRDGISKRDDKVAIQQLPKHQEA*PHPKWA Trigger: TGCCCACTTGGGGTGTGGCCAGGCCTCCTGATGCTT...GGGAAGCTGCTGAATCGCTACCTTATCATCTCTCTTACTAATGCCGTCCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGTGCTGGGAAGGGAATGCCACTGAGTCTGTCCAGTCTCTGAGACACACAATAGACCTGTCTGTGTaGGTGGGTAGAAAGGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: CGCWEGNATESVQSLRHTIDLSV*VGRKGP Trigger: AGGGCCCTTTCTACCCACCCACACAGACAGGTCTAT...TGTGTGTCTCAGAGACTGGACAGACTCAGTGGCATTCCCTTCCCAGCACCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR-3UTR GCA 90 bp | CTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTGGCCCCTACATGGAGGTAGTGAAGTTAGTCATCTCTaGAGGAGACAGCTCATCATC | + |
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Preference number: 2 (lower is better) Translates to: LDSSSRGPDALWPLHGGSEVSHL*RRQLII Trigger: GATGATGAGCTGTCTCCTGCAGAGATGACTAACTTC...ACTACCTCCATGTAGGGGCCAGAGGGCATCAGGTCCCCTGGAACTGGAATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR GCA 90 bp | GACACGGTCATCTTGACTCTGGGCACTCCCACACGGCGCACTCAAACACCTGTAAACTTTTCTCGCCACTaGTTGGCACTTGTGGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: DTVILTLGTPTRRTQTPVNFSRH*LALVEV Trigger: AACTTCCACAAGTGCCAAGCAGTGGCGAGAAAAGTT...TACAGGTGTTTGAGTGCGCCGTGTGGGAGTGCCCAGAGTCAAGATGACCGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAGATGGCCCACAACCTCCTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTTCCAAGCACATTAGATaGCCCACAACCTCCTGGATT | + |
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Preference number: 2 (lower is better) Translates to: IRWPTTSWIPVPGDLMPSSKHIR*PTTSWI Trigger: AATCCAGGAGGTTGTGGGCCATCTAATGTGCTTGGA...AGAGGGCATCAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGCCATCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCACAATATGTTTTAAAGACGCTTGGAAGCTCACATGCCAGGCGTAATGGAAAGCATCAGGAGGCCTaGCCACACCCCAAGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ASQYVLKTLGSSHARRNGKHQEA*PHPKWA Trigger: TGCCCACTTGGGGTGTGGCCAGGCCTCCTGATGCTT...TCCATTACGCCTGGCATGTGAGCTTCCAAGCGTCTTTAAAACATATTGTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCACAATATGTTTTAAAGACGCTTGGAAGCTCACATGCCAGGCGTAATGGAAGGCGGCATCGGCTGTaGCACGGTCATCTTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: ASQYVLKTLGSSHARRNGRRHRL*HGHLDS Trigger: AGAGTCAAGATGACCGTGTCACAGCCGATGCCGCCT...TCCATTACGCCTGGCATGTGAGCTTCCAAGCGTCTTTAAAACATATTGTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| 3UTR-3UTR GCA 90 bp | GGTAGCGATTCAGCAGCTTCCCCAGTCCCAGATCTTGCAAGGTGTCATCTGGGAGTTTTGATTCAGGCATaGTTCTGTGTGTCAGATTGC | + |
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Preference number: 2 (lower is better) Translates to: GSDSAASPVPDLARCHLGVLIQA*FCVSDC Trigger: GCAATCTGACACACAGAAGCATGCCTGAATCAAAAC...TCCCAGATGACACCTTGCAAGATCTGGGACTGGGGAAGCTGCTGAATCGCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR GCA 90 bp | GCATCACAATATGTTTTAAAGACGCTTGGAAGCTCACATGCCAGGCGTAATGGAGCTCGGCTGCTGCTGTaGATTACTTCCCTCAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: ASQYVLKTLGSSHARRNGARLLL*ITSLSY Trigger: GTAGCTGAGGGAAGTAATGCACAGCAGCAGCCGAGC...TCCATTACGCCTGGCATGTGAGCTTCCAAGCGTCTTTAAAACATATTGTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| 3UTR-3UTR GCA 90 bp | GACACGGTCATCTTGACTCTGGGCACTCCCACACGGCGCACTCAAACACCTGTATTAATTCATCTTGCCTaGGTTTCAAAAGTGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: DTVILTLGTPTRRTQTPVLIHLA*VSKVLL Trigger: CAGAAGCACTTTTGAAACGCAGGCAAGATGAATTAA...TACAGGTGTTTGAGTGCGCCGTGTGGGAGTGCCCAGAGTCAAGATGACCGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGGTAAGCAGAAACCAACGAAGGCTTCATAGTAGGAATCAGGAAACTTTTAGGCGGCATCGGCTGTaGCACGGTCATCTTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: ALVSRNQRRLHSRNQETFRRHRL*HGHLDS Trigger: AGAGTCAAGATGACCGTGTCACAGCCGATGCCGCCT...AAAAGTTTCCTGATTCCTACTATGAAGCCTTCGTTGGTTTCTGCTTACCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCCTAGGCTGTTCTCCTGTATGCTTCATTTTCCTGAACCTGTTTCAGTGTTGCTACTCTGCATCCCATaGAGAAGAGAGATGATGACC | + |
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Preference number: 2 (lower is better) Translates to: GPRLFSCMLHFPEPVSVLLLCIP*RREMMT Trigger: GGTCATCATCTCTCTTCTTCATGGGATGCAGAGTAG...CAACACTGAAACAGGTTCAGGAAAATGAAGCATACAGGAGAACAGCCTAGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR-3UTR CCA 90 bp | TCTGCAGTTAGGCCTTTTAAGTTCCCCTCTCCAGGTGTGGTAATCCAAAGGCTTTCTCTTCTGAGGACCTaGGTTTGGTTCCAAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: SAVRPFKFPSPGVVIQRLSLLRT*VWFQAH Trigger: ATGTGCTTGGAACCAAACCCAGGTCCTCAGAAGAGA...AAGCCTTTGGATTACCACACCTGGAGAGGGGAACTTAAAAGGCCTAACTGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR CAA 90 bp | AGAGATGATAAGGTAGCGATTCAGCAGCTTCCCCAGTCCCAGATCTaGCAAGGTGTCATCTGGGAGAAGGCCATTCCAAAGAAGAATATT | + |
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Preference number: 2 (lower is better) Translates to: RDDKVAIQQLPQSQI*QGVIWEKAIPKKNI Trigger: AATATTCTTCTTTGGAATGGCCTTCTCCCAGATGACACCTTGCAAGATCTGGGACTGGGGAAGCTGCTGAATCGCTACCTTATCATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGCAGTTAGGCCTTTTAAGTTCCCCTCTCCAGGTGTGGTAATCCAAAGGCTTCATTTCCTTCCGGATTaGGAGAGTAAAAGAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SAVRPFKFPSPGVVIQRLHFLPD*ESKRAA Trigger: TGCTGCTCTTTTACTCTCTCAATCCGGAAGGAAATG...AAGCCTTTGGATTACCACACCTGGAGAGGGGAACTTAAAAGGCCTAACTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGGTAAGCAGAAACCAACGAAGGCTTCATAGTAGGAATCAGGAAACTTTTGCTCGGCTGCTGCTGTaGATTACTTCCCTCAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: ALVSRNQRRLHSRNQETFARLLL*ITSLSY Trigger: GTAGCTGAGGGAAGTAATGCACAGCAGCAGCCGAGC...AAAAGTTTCCTGATTCCTACTATGAAGCCTTCGTTGGTTTCTGCTTACCAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCAGATCTTGCAAGGTGTCATCTGGGAGAAGGCCATTCCAAAGAAGAATATCTCTTCTGAGGACCTaGGTTTGGTTCCAAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: SPRSCKVSSGRRPFQRRISLLRT*VWFQAH Trigger: ATGTGCTTGGAACCAAACCCAGGTCCTCAGAAGAGA...TATTCTTCTTTGGAATGGCCTTCTCCCAGATGACACCTTGCAAGATCTGGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR CAA 90 bp | CTTCATAGTAGGAATCAGGAAACTTTTCTCGCCACTGCTTGGCACTaGTGGAAGTTAGTCATCTCTGCAGGAGACAGCTCATCATCACTA | + |
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Preference number: 2 (lower is better) Translates to: LHSRNQETFLATAWH*WKLVISAGDSSSSL Trigger: TAGTGATGATGAGCTGTCTCCTGCAGAGATGACTAACTTCCACAAGTGCCAAGCAGTGGCGAGAAAAGTTTCCTGATTCCTACTATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR CAA 90 bp | ATGCTGCTCTCCATAAACTCTGTTATAGCTGTGAACCAGGGCATCTaGTCTAGACCTATGGAGTCCATCTTAAGAGGATTCCAGTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: MLLSINSVIAVNQGI*SRPMESILRGFQSS Trigger: GCTTGACTGGAATCCTCTTAAGATGGACTCCATAGGTCTAGACAAGATGCCCTGGTTCACAGCTATAACAGAGTTTATGGAGAGCAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCAAGCTTCCATTTGCCGATGTCTCATCTTTGCGTGATAACTGCTGCAAACATTTCCTTCCGGATTaGGAGAGTAAAAGAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: TAKLPFADVSSLRDNCCKHFLPD*ESKRAA Trigger: TGCTGCTCTTTTACTCTCTCAATCCGGAAGGAAATG...TTTGCAGCAGTTATCACGCAAAGATGAGACATCGGCAAATGGAAGCTTGGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGTTCTCCTGTATGCTTCATTTTCCTGAACCTGTTTCAGTGTTGACAATAGGTGAAGATCTCTTCTaGGGACCTGGGTTTGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RLFSCMLHFPEPVSVLTIGEDLF*GPGFGS Trigger: GGAACCAAACCCAGGTCCTCAGAAGAGATCTTCACC...TATTGTCAACACTGAAACAGGTTCAGGAAAATGAAGCATACAGGAGAACAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGTTCTCCTGTATGCTTCATTTTCCTGAACCTGTTTCAGTGTTGACAATATCTTCACAGGGAGGGTaGAGATCTCTTCTGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: RLFSCMLHFPEPVSVLTISSQGG*RSLLRT Trigger: GGTCCTCAGAAGAGATCTTCACCCTCCCTGTGAAGA...TATTGTCAACACTGAAACAGGTTCAGGAAAATGAAGCATACAGGAGAACAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGGACGGCATTAGTAAGAGAGATGATAAGGTAGCGATTCAGCAGCTTCCCCTGATCTGCAAACATTaGAGTTTGCTGAAGATGGTT | + |
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Preference number: 2 (lower is better) Translates to: SRDGISKRDDKVAIQQLPLICKH*SLLKMV Trigger: AACCATCTTCAGCAAACTCCAATGTTTGCAGATCAG...GGGAAGCTGCTGAATCGCTACCTTATCATCTCTCTTACTAATGCCGTCCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCAGATCTTGCAAGGTGTCATCTGGGAGAAGGCCATTCCAAAGAAGAATAACTGCTTGGCACTTGTaGAAGTTAGTCATCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SPRSCKVSSGRRPFQRRITAWHL*KLVISA Trigger: TGCAGAGATGACTAACTTCCACAAGTGCCAAGCAGT...TATTCTTCTTTGGAATGGCCTTCTCCCAGATGACACCTTGCAAGATCTGGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR CAA 90 bp | TTTCGGAAGAGCTTTAGAGCTCCCCAGAACTGTCTTTCTTGGAACTaGGAGTGTGGTGACATTTTTCCTTCTTCAGAGCTCTTTGGGTAT | + |
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Preference number: 2 (lower is better) Translates to: FRKSFRAPQNCLSWN*ECGDIFPSSELFGY Trigger: ATACCCAAAGAGCTCTGAAGAAGGAAAAATGTCACCACACTCCAAGTTCCAAGAAAGACAGTTCTGGGGAGCTCTAAAGCTCTTCCGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGGACGGCATTAGTAAGAGAGATGATAAGGTAGCGATTCAGCAGCTTCCCGCACACATATACACATaGTTTTGTAACGAGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: SRDGISKRDDKVAIQQLPAHIYT*FCNEQM Trigger: CATTTGCTCGTTACAAAAGCATGTGTATATGTGTGC...GGGAAGCTGCTGAATCGCTACCTTATCATCTCTCTTACTAATGCCGTCCCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR CAA 90 bp | GATTCCAGTCAAGCAACTGAACTCGTATCAGGGGACTTAAAAGCTTaGGTAAGCAGAAACCAACGAAGGCTTCATAGTAGGAATCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: DSSQATELVSGDLKA*VSRNQRRLHSRNQE Trigger: TTCCTGATTCCTACTATGAAGCCTTCGTTGGTTTCTGCTTACCAAAGCTTTTAAGTCCCCTGATACGAGTTCAGTTGCTTGACTGGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGCAGTTAGGCCTTTTAAGTTCCCCTCTCCAGGTGTGGTAATCCAAAGGCTTGCACACATATACACATaGTTTTGTAACGAGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: SAVRPFKFPSPGVVIQRLAHIYT*FCNEQM Trigger: CATTTGCTCGTTACAAAAGCATGTGTATATGTGTGC...AAGCCTTTGGATTACCACACCTGGAGAGGGGAACTTAAAAGGCCTAACTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| 3UTR-3UTR CCA 90 bp | AACTCTAAAAGGGCAGTAGAGTTAGCATCACAATATGTTTTAAAGACGCTTGGACTGATCTGCAAACATTaGAGTTTGCTGAAGATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: NSKRAVELASQYVLKTLGLICKH*SLLKMV Trigger: AACCATCTTCAGCAAACTCCAATGTTTGCAGATCAG...TCCAAGCGTCTTTAAAACATATTGTGATGCTAACTCTACTGCCCTTTTAGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR CCA 72 bp | GGCACTCCCACACGGCGCACTCAAACACCTGTACTCTaGGCTGGGAGGGGCTCCAGGGGACGCTCTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GTPTRRTQTPVL*AGRGSRGRSSL Trigger: CAGAGAAGAGCGTCCCCTGGAGCCCCTCCCAGCCCAGAGTACAGGTGTTTGAGTGCGCCGTGTGGGAGTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR TCA 72 bp | CCCCAAGTGGGCACCCAGCAAAGGCGGCATCGGCTGTaGCACGGTCATCTTGACTCTGGGCACTCCCACACG | + |
|
Preference number: 3 (lower is better) Translates to: PQVGTQQRRHRL*HGHLDSGHSHT Trigger: CGTGTGGGAGTGCCCAGAGTCAAGATGACCGTGTCACAGCCGATGCCGCCTTTGCTGGGTGCCCACTTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR CCA 72 bp | TCCCACACGGCGCACTCAAACACCTGTACTCTGGGCTaGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SHTAHSNTCTLG*EGLQGTLFSEG Trigger: TCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCAGCCCAGAGTACAGGTGTTTGAGTGCGCCGTGTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR TCA 72 bp | CCAGCAAAGGCGGCATCGGCTGTGACACGGTCATCTTaGCTCTGGGCACTCCCACACGGCGCACTCAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: PAKAASAVTRSS*LWALPHGALKH Trigger: GTGTTTGAGTGCGCCGTGTGGGAGTGCCCAGAGTCAAGATGACCGTGTCACAGCCGATGCCGCCTTTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR TCA 72 bp | ATGAAGCCCCAGCTGGCCCGCAGCTCACTGGGTCTGTaGGACGAATCACCAGGTGAGTGTGTGCACCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: MKPQLARSSLGL*DESPGECVHLL Trigger: CAACAGGTGCACACACTCACCTGGTGATTCGTCTCACAGACCCAGTGAGCTGCGGGCCAGCTGGGGCTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR CCA 72 bp | CTCCTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTaGCCCCTACATGGAGGTAGTGCTAAACCCACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLDSSSRGPDAL*PLHGGSAKPTQ Trigger: CTGGGTGGGTTTAGCACTACCTCCATGTAGGGGCCAGAGGGCATCAGGTCCCCTGGAACTGGAATCCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR TCA 72 bp | AGCCACCTGGTGTGGGTGCTGGGAAGGGAATGCCACTaGGTCTGTCCAGTCTCTGAGACACACACAGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SHLVWVLGRECH*VCPVSETHTGL Trigger: GAGACCTGTGTGTGTCTCAGAGACTGGACAGACTCAGTGGCATTCCCTTCCCAGCACCCACACCAGGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR TCA 72 bp | GCAGGAGACAGCTCATCATCACTAGACATCCCTTCCTaGTGGTCACAGCTGCCCGAGAGCTCCCTGGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AGDSSSSLDIPS*WSQLPESSLAC Trigger: ACAGGCCAGGGAGCTCTCGGGCAGCTGTGACCATCAGGAAGGGATGTCTAGTGATGATGAGCTGTCTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR CCA 72 bp | GAGACACACACAGGTCTCCCGATAGACCTGTCTGTGTaGGTGGGTAGAAAGGGCCCTAGGCTGTTCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ETHTGLPIDLSV*VGRKGPRLFSC Trigger: ACAGGAGAACAGCCTAGGGCCCTTTCTACCCACCCACACAGACAGGTCTATCGGGAGACCTGTGTGTGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR CCA 72 bp | TTTGGTTCCAAGCACATTAGATGGCCCACAACCTCCTaGATTCCAGTTCCAGGGGACCTGATGCCCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FGSKHIRWPTTS*IPVPGDLMPSG Trigger: GCCAGAGGGCATCAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGCCATCTAATGTGCTTGGAACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR-3UTR CAA 90 bp | GACACGGTCATCTTGACTCTGGGCACTCCCACACGGCGCACTCAAACACCTGTACAGCCAAGCTTCCATTaGCCGATGTCTCATCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: DTVILTLGTPTRRTQTPVQPSFH*PMSHLC Trigger: GCAAAGATGAGACATCGGCAAATGGAAGCTTGGCTG...TACAGGTGTTTGAGTGCGCCGTGTGGGAGTGCCCAGAGTCAAGATGACCGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTGGCCCCTACATGGAGGTAGTGGGGACTTAAAAGCTTaGGTAAGCAGAAACCAACGA | + |
|
Preference number: 3 (lower is better) Translates to: LDSSSRGPDALWPLHGGSGDLKA*VSRNQR Trigger: TCGTTGGTTTCTGCTTACCAAAGCTTTTAAGTCCCC...ACTACCTCCATGTAGGGGCCAGAGGGCATCAGGTCCCCTGGAACTGGAATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTAGATGGCCCACAACCTCCTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTGCTGATCTGCAAACATaGGAGTTTGCTGAAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: IRWPTTSWIPVPGDLMPSADLQT*EFAEDG Trigger: ACCATCTTCAGCAAACTCCAATGTTTGCAGATCAGC...AGAGGGCATCAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGCCATCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR TCA 72 bp | GGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTaGGTCAGAGCTTTTACCTTCACCAGGATAAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: GSRGRSSLRDSA*VRAFTFTRIRI Trigger: AATTCTTATCCTGGTGAAGGTAAAAGCTCTGACTCAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152996.8 ENSMUST00000203959.2 |
||
| 3UTR GCA 72 bp | CGCCACTGCTTGGCACTTGTGGAAGTTAGTCATCTCTaGAGGAGACAGCTCATCATCACTAGACATCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RHCLALVEVSHL*RRQLIITRHPF Trigger: GAAGGGATGTCTAGTGATGATGAGCTGTCTCCTGCAGAGATGACTAACTTCCACAAGTGCCAAGCAGTGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR TCA 72 bp | CTGAGTACCTCTTTTCTATTTAAGTGCATGCTTGTGTaGCTGCATCAGACCCCCGGGAGCTGGAGTTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSTSFLFKCMLV*LHQTPGSWSYR Trigger: CCTGTAACTCCAGCTCCCGGGGGTCTGATGCAGTCACACAAGCATGCACTTAAATAGAAAAGAGGTACTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR GCA 72 bp | GTACCTCTTTTCTATTTAAGTGCATGCTTGTGTGACTaGATCAGACCCCCGGGAGCTGGAGTTACAGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VPLFYLSACLCD*IRPPGAGVTGG Trigger: ACCACCTGTAACTCCAGCTCCCGGGGGTCTGATGCAGTCACACAAGCATGCACTTAAATAGAAAAGAGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR-3UTR CAA 90 bp | TTGATTCAGGCATGCTTCTGTGTGTCAGATTGCTTCATTTCCTTCCGGATTGAGTGTGACACGGTCATCTaGACTCTGGGCACTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LIQACFCVSDCFISFRIECDTVI*TLGTPT Trigger: TGTGGGAGTGCCCAGAGTCAAGATGACCGTGTCACA...CTCAATCCGGAAGGAAATGAAGCAATCTGACACACAGAAGCATGCCTGAATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR TCA 72 bp | AGCTTCATTCTTCACAGGGAGGGTGAAGATCTCTTCTaGGGACCTGGGTTTGGTTCCAAGCACATTAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SFILHREGEDLF*GPGFGSKHIRW Trigger: CCATCTAATGTGCTTGGAACCAAACCCAGGTCCTCAGAAGAGATCTTCACCCTCCCTGTGAAGAATGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR CCA 72 bp | GAAAGTTTGTTGTTTCTGGTTCTTAAGTTTTTGTCGTaGTCTCATGAAGCCCCAGCTGGCCCGCAGCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: ESLLFLVLKFLS*SHEAPAGPQLT Trigger: AGTGAGCTGCGGGCCAGCTGGGGCTTCATGAGACCACGACAAAAACTTAAGAACCAGAAACAACAAACTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR CCA 72 bp | CAGCTTCCCCAGTCCCAGATCTTGCAAGGTGTCATCTaGGAGAAGGCCATTCCAAAGAAGAATATTTCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLPQSQILQGVI*EKAIPKKNISE Trigger: TTCCGAAATATTCTTCTTTGGAATGGCCTTCTCCCAGATGACACCTTGCAAGATCTGGGACTGGGGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR CCA 72 bp | AATCAGGAAACTTTTCTCGCCACTGCTTGGCACTTGTaGAAGTTAGTCATCTCTGCAGGAGACAGCTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: NQETFLATAWHL*KLVISAGDSSS Trigger: TGATGAGCTGTCTCCTGCAGAGATGACTAACTTCCACAAGTGCCAAGCAGTGGCGAGAAAAGTTTCCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR TCA 72 bp | GAATTTAAAGGCGATAGCTTACTACTCTGCATCCCATaGAGAAGAGAGATGATGACCGAGAGCACAGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: EFKGDSLLLCIP*RREMMTESTAI Trigger: GATGGCTGTGCTCTCGGTCATCATCTCTCTTCTTCATGGGATGCAGAGTAGTAAGCTATCGCCTTTAAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR TCA 72 bp | GAGGGTTCCAAGATCAGTGTCACGTACACTTCAGAATaGGACCCAGTCTCCACAAAAGAAACCATCAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EGSKISVTYTSE*DPVSTKETIRD Trigger: ATCTCTGATGGTTTCTTTTGTGGAGACTGGGTCTCATTCTGAAGTGTACGTGACACTGATCTTGGAACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR TCA 72 bp | TGCATCCTCCGAGCTTCAATCTCTTCTAAAATCCGTTaGTCCTTTTCATCCACAGCCAAGCTTCCATTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CILRASISSKIR*SFSSTAKLPFA Trigger: GGCAAATGGAAGCTTGGCTGTGGATGAAAAGGATCAACGGATTTTAGAAGAGATTGAAGCTCGGAGGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR CCA 72 bp | ACATGCTGCTATCTGGCTGCACTTTTTAACCACATCTaGTCCAGGGACGGCATTAGTAAGAGAGATGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: TCCYLAALFNHI*SRDGISKRDDK Trigger: CTTATCATCTCTCTTACTAATGCCGTCCCTGGACCAGATGTGGTTAAAAAGTGCAGCCAGATAGCAGCATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR GCA 72 bp | CCACAGCCAAGCTTCCATTTGCCGATGTCTCATCTTTaGGTGATAACTGCTGCAAATATGATGATTCGCATT | + |
|
Preference number: 3 (lower is better) Translates to: PQPSFHLPMSHL*VITAANMMIRI Trigger: AATGCGAATCATCATATTTGCAGCAGTTATCACGCAAAGATGAGACATCGGCAAATGGAAGCTTGGCTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR GCA 72 bp | TTTTCAGAAGCGAACTGTTCAAAAGCCACTCTGCAGTaGACTGTTAAACTTCTTGTCTGTGAGGTTGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: FSEANCSKATLQ*TVKLLVCEVDR Trigger: CCTGTCAACCTCACAGACAAGAAGTTTAACAGTGCACTGCAGAGTGGCTTTTGAACAGTTCGCTTCTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR TCA 72 bp | ATGGAGTCCATCTTAAGAGGATTCCAGTCAAGCAACTaGACTCGTATCAGGGGACTTAAAAGCTTTGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: MESILRGFQSSN*TRIRGLKSFGK Trigger: CTTACCAAAGCTTTTAAGTCCCCTGATACGAGTTCAGTTGCTTGACTGGAATCCTCTTAAGATGGACTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR GCA 72 bp | CTTCATTTTCAGAAGCGAACTGTTCAAAAGCCACTCTaGAGTGCACTGTTAAACTTCTTGTCTGTGAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LHFQKRTVQKPL*SALLNFLSVRL Trigger: CAACCTCACAGACAAGAAGTTTAACAGTGCACTGCAGAGTGGCTTTTGAACAGTTCGCTTCTGAAAATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR GCA 72 bp | ATGGTTTTGATTCAGGCATGCTTCTGTGTGTCAGATTaGTTCATTTCCTTCCGGATTGAGAGAGTAAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: MVLIQACFCVSD*FISFRIERVKE Trigger: CTCTTTTACTCTCTCAATCCGGAAGGAAATGAAGCAATCTGACACACAGAAGCATGCCTGAATCAAAACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTCTAAAAGGGCAGTAGAGTTAGCATCACAATATGTTTTAAAGACGCTTGGAGCTGATCTGCAAACATaGGAGTTTGCTGAAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: NSKRAVELASQYVLKTLGADLQT*EFAEDG Trigger: ACCATCTTCAGCAAACTCCAATGTTTGCAGATCAGC...TCCAAGCGTCTTTAAAACATATTGTGATGCTAACTCTACTGCCCTTTTAGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR CCA 72 bp | ATGAGACCCAGTCTCCACAAAAGAAACCATCAGAGATaGACAGTGAAAGTTTGTTGTTTCTGGTTCTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: MRPSLHKRNHQR*TVKVCCFWFLS Trigger: ACTTAAGAACCAGAAACAACAAACTTTCACTGTCCATCTCTGATGGTTTCTTTTGTGGAGACTGGGTCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR GCA 72 bp | CCATTTGCCGATGTCTCATCTTTGCGTGATAACTGCTaGAAATATGATGATTCGCATTTTAATTCATCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PFADVSSLRDNC*KYDDSHFNSSC Trigger: GCAAGATGAATTAAAATGCGAATCATCATATTTGCAGCAGTTATCACGCAAAGATGAGACATCGGCAAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCACACCCCAAGTGGGCACCCAGCAAAGGCGGCATCGGCTGTGACACGGCGCCGGGATCCTGACTaGTTTCCTCATCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGHTPSGHPAKAASAVTRRRDPD*FPHLLL Trigger: CAGCAGCAGATGAGGAAAGCAGTCAGGATCCCGGCG...CCGTGTCACAGCCGATGCCGCCTTTGCTGGGTGCCCACTTGGGGTGTGGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGGGCTGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTGAGAGCTCAGCTGTTCTaGATTCTGCTCCGCCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLGWEGLQGTLFSEGFGLRAQLF*ILLRRP Trigger: GGGACGGCGGAGCAGAATGCAGAACAGCTGAGCTCT...CAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCAGCCCAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCTGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTGAGTCCCAGTCCCAGATCTTaGAAGGTGTCATCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGWEGLQGTLFSEGFGLSPSPRS*KVSSGR Trigger: TCTCCCAGATGACACCTTGCAAGATCTGGGACTGGG...ACTCAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCAGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203959.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTGCTGGGAAGGGAATGCCACTGAGTCTGTCCAGTCTCTGAGACACACACGCTATCGCTATCGCTaGACTCGACCTGGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGCWEGNATESVQSLRHTRYRYR*TRPGAA Trigger: GGCGGCGCCAGGTCGAGTCCAGCGATAGCGATAGCG...TGTGTGTCTCAGAGACTGGACAGACTCAGTGGCATTCCCTTCCCAGCACCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGCCACACCCCAAGTGGGCACCCAGCAAAGGCGGCATCGGCTGTGACACGGCGGGGATCTCAACTATaGGTGAAACGTCTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGHTPSGHPAKAASAVTRRGSQL*VKRLFL Trigger: AAGAAAGAGACGTTTCACCCATAGTTGAGATCCCCG...CCGTGTCACAGCCGATGCCGCCTTTGCTGGGTGCCCACTTGGGGTGTGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTGAGTCAGAGCCTTTGCCGGAGTGTTTaGGGCTTTGGGGTAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: WEGLQGTLFSEGFGLSQSLCRSV*GFGVNS Trigger: ACTGTTTACCCCAAAGCCTCAAACACTCCGGCAAAG...GCTCTGACTCAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGATGGCCCACAACCTCCTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTCAAACACCTGTACTCTaGGCTGGGAGGGGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRWPTTSWIPVPGDLMPSQTPVL*AGRGSR Trigger: CCTGGAGCCCCTCCCAGCCCAGAGTACAGGTGTTTG...AGAGGGCATCAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGCCATCTAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGCCACACCCCAAGTGGGCACCCAGCAAAGGCGGCATCGGCTGTGACACGGGTCTTTCTTGGAACTTaGAGTGTGGTGACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGHTPSGHPAKAASAVTRVFLGT*SVVTFF Trigger: GAAAAATGTCACCACACTCCAAGTTCCAAGAAAGAC...CCGTGTCACAGCCGATGCCGCCTTTGCTGGGTGCCCACTTGGGGTGTGGCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR TCA 90 bp | CTGGGCTGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTGAGTGAACTTGGAGTGTGGTaGCATTTTTCCTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGWEGLQGTLFSEGFGLSELGVW*HFSFFR Trigger: TCTGAAGAAGGAAAAATGTCACCACACTCCAAGTTC...ACTCAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCAGCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203959.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCACACCCCAAGTGGGCACCCAGCAAAGGCGGCATCGGCTGTGACACGGTTAATTCATCTTGCCTaGGTTTCAAAAGTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGHTPSGHPAKAASAVTRLIHLA*VSKVLL Trigger: CAGAAGCACTTTTGAAACGCAGGCAAGATGAATTAA...CCGTGTCACAGCCGATGCCGCCTTTGCTGGGTGCCCACTTGGGGTGTGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR CCA 90 bp | GTACTCTGGGCTGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTCTTACAGTCAGAAGTaGAGCAGGAGTGGTTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: VLWAGRGSRGRSSLRDSASYSQK*SRSGLH Trigger: ATGTAAACCACTCCTGCTCCACTTCTGACTGTAAGA...AGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCAGCCCAGAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTGAGTCAGAGCCTTTTTAACCACATCTaGTCCAGGGACGGCATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WEGLQGTLFSEGFGLSQSLFNHI*SRDGIS Trigger: ACTAATGCCGTCCCTGGACCAGATGTGGTTAAAAAG...GCTCTGACTCAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203959.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGATGGCCCACAACCTCCTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTCTGGCCTGTCTTCTCTaGATCCTCCGAGCTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: IRWPTTSWIPVPGDLMPSLACLL*ILRASI Trigger: GATTGAAGCTCGGAGGATGCAGAGAAGACAGGCCAG...AGAGGGCATCAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGCCATCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTGAGTCAGAGCGTTCAAAAGCCACTCTaGAGTGCACTGTTAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: WEGLQGTLFSEGFGLSQSVQKPL*SALLNF Trigger: GAAGTTTAACAGTGCACTGCAGAGTGGCTTTTGAAC...GCTCTGACTCAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203959.2 |
||
| CDS-3UTR TCA 90 bp | ATTAGATGGCCCACAACCTCCTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTCTTTGCCGGAGTGTTTaGGGCTTTGGGGTAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRWPTTSWIPVPGDLMPSLCRSV*GFGVNS Trigger: ACTGTTTACCCCAAAGCCTCAAACACTCCGGCAAAG...AGAGGGCATCAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGCCATCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTGAGTCAGAGCGTCTTTCTTGGAACTTaGAGTGTGGTGACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WEGLQGTLFSEGFGLSQSVFLGT*SVVTFF Trigger: GAAAAATGTCACCACACTCCAAGTTCCAAGAAAGAC...GCTCTGACTCAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203959.2 |
||
| 3UTR CAA 72 bp | ACAGGGAGGGTGAAGATCTCTTCTGAGGACCTGGGTTaGGTTCCAAGCACATTAGATGGCCCACAACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGRVKISSEDLG*VPSTLDGPQPP Trigger: AGGAGGTTGTGGGCCATCTAATGTGCTTGGAACCAAACCCAGGTCCTCAGAAGAGATCTTCACCCTCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR CAA 72 bp | AAGGTAGCGATTCAGCAGCTTCCCCAGTCCCAGATCTaGCAAGGTGTCATCTGGGAGAAGGCCATTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVAIQQLPQSQI*QGVIWEKAIPK Trigger: CTTTGGAATGGCCTTCTCCCAGATGACACCTTGCAAGATCTGGGACTGGGGAAGCTGCTGAATCGCTACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR CAA 72 bp | GGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTaGAGTCAGAGCTTTTACCTTCACCAGGATAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLQGTLFSEGFG*SQSFYLHQDKN Trigger: ATTCTTATCCTGGTGAAGGTAAAAGCTCTGACTCAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152996.8 ENSMUST00000203959.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCTAGGCTGTTCTCCTGTATGCTTCATTTTCCTGAACCTGTTTCAGTGTTGAGAGCTCAGCTGTTCTaGATTCTGCTCCGCCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPRLFSCMLHFPEPVSVLRAQLF*ILLRRP Trigger: GGGACGGCGGAGCAGAATGCAGAACAGCTGAGCTCT...CAACACTGAAACAGGTTCAGGAAAATGAAGCATACAGGAGAACAGCCTAGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | GGCCCTAGGCTGTTCTCCTGTATGCTTCATTTTCCTGAACCTGTTTCAGTGTTGCGCCGGGATCCTGACTaGTTTCCTCATCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPRLFSCMLHFPEPVSVLRRDPD*FPHLLL Trigger: CAGCAGCAGATGAGGAAAGCAGTCAGGATCCCGGCG...CAACACTGAAACAGGTTCAGGAAAATGAAGCATACAGGAGAACAGCCTAGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR CCA 90 bp | CTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTGGCCCCTACATGGAGGTAGTAGTATTCTCTTTTCGTaGTCATCAGGATCGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDSSSRGPDALWPLHGGSSILFS*SSGSLS Trigger: AGAGAGCGATCCTGATGACCACGAAAAGAGAATACT...ACTACCTCCATGTAGGGGCCAGAGGGCATCAGGTCCCCTGGAACTGGAATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGAAGATGGTTTTGATTCAGGCATGCTTCTGTGTGTCAGATTGCTTCATCGCTATCGCTATCGCTaGACTCGACCTGGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FAEDGFDSGMLLCVRLLHRYRYR*TRPGAA Trigger: GGCGGCGCCAGGTCGAGTCCAGCGATAGCGATAGCG...ATGAAGCAATCTGACACACAGAAGCATGCCTGAATCAAAACCATCTTCAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCTGATCTGCAAACATTGGAGTTTGCTGAAGATGGTTTTGATTCAGGCATGACCTGTACTCTGGGCTaGGAGGGGCTCCAGGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LADLQTLEFAEDGFDSGMTCTLG*EGLQGT Trigger: CGTCCCCTGGAGCCCCTCCCAGCCCAGAGTACAGGT...CATGCCTGAATCAAAACCATCTTCAGCAAACTCCAATGTTTGCAGATCAGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGTGAAGATCTCTTCTGAGGACCTGGGTTTGGTTCCAAGCACATTAGATACTGCTTTCCTCATCTaGTGCTGCTCCCAGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRVKISSEDLGLVPSTLDTAFLI*CCSQMS Trigger: AGACATCTGGGAGCAGCAGCAGATGAGGAAAGCAGT...ATCTAATGTGCTTGGAACCAAACCCAGGTCCTCAGAAGAGATCTTCACCCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCTGAAGATGGTTTTGATTCAGGCATGCTTCTGTGTGTCAGATTGCTTCATCCTGATGGTCACAGCTaGCCGAGAGCTCCCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FAEDGFDSGMLLCVRLLHPDGHS*PRAPWP Trigger: AGGCCAGGGAGCTCTCGGGCAGCTGTGACCATCAGG...ATGAAGCAATCTGACACACAGAAGCATGCCTGAATCAAAACCATCTTCAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTGCTGGGAAGGGAATGCCACTGAGTCTGTCCAGTCTCTGAGACACACAGTTCAAAAGCCACTCTaGAGTGCACTGTTAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGCWEGNATESVQSLRHTVQKPL*SALLNF Trigger: GAAGTTTAACAGTGCACTGCAGAGTGGCTTTTGAAC...TGTGTGTCTCAGAGACTGGACAGACTCAGTGGCATTCCCTTCCCAGCACCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGTTAGGCCTTTTAAGTTCCCCTCTCCAGGTGTGGTAATCCAAAGGCTTCCCAGTCCCAGATCTTaGAAGGTGTCATCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVRPFKFPSPGVVIQRLPSPRS*KVSSGR Trigger: TCTCCCAGATGACACCTTGCAAGATCTGGGACTGGG...AAGCCTTTGGATTACCACACCTGGAGAGGGGAACTTAAAAGGCCTAACTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | ACAGCCAAGCTTCCATTTGCCGATGTCTCATCTTTGCGTGATAACTGCTGCAAAGCTTTCCTCATCTGCTaGTGCTCCCAGATGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAKLPFADVSSLRDNCCKAFLIC*CSQMSW Trigger: CCAAGACATCTGGGAGCAGCAGCAGATGAGGAAAGC...TTTGCAGCAGTTATCACGCAAAGATGAGACATCGGCAAATGGAAGCTTGGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCACATTAGATGGCCCACAACCTCCTGGATTCCAGTTCCAGGGGACCTGGAGTGTTTGAGGCTTTaGGGTAAACAGTATTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKHIRWPTTSWIPVPGDLECLRL*GKQYSL Trigger: AAGAGAATACTGTTTACCCCAAAGCCTCAAACACTC...CAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGCCATCTAATGTGCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR CAA 72 bp | AGGAATCAGGAAACTTTTCTCGCCACTGCTTGGCACTaGTGGAAGTTAGTCATCTCTGCAGGAGACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNQETFLATAWH*WKLVISAGDSS Trigger: TGAGCTGTCTCCTGCAGAGATGACTAACTTCCACAAGTGCCAAGCAGTGGCGAGAAAAGTTTCCTGATTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCTAGGCTGTTCTCCTGTATGCTTCATTTTCCTGAACCTGTTTCAGTGTTGCTCTGGTGTGAGCGATaGGACTCCTGTAGTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPRLFSCMLHFPEPVSVLLWCER*DSCSNV Trigger: AACATTACTACAGGAGTCTCATCGCTCACACCAGAG...CAACACTGAAACAGGTTCAGGAAAATGAAGCATACAGGAGAACAGCCTAGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGTGAAGATCTCTTCTGAGGACCTGGGTTTGGTTCCAAGCACATTAGATCTTTTTAACCACATCTaGTCCAGGGACGGCATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRVKISSEDLGLVPSTLDLFNHI*SRDGIS Trigger: ACTAATGCCGTCCCTGGACCAGATGTGGTTAAAAAG...ATCTAATGTGCTTGGAACCAAACCCAGGTCCTCAGAAGAGATCTTCACCCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR TCA 90 bp | GAATCAGGAAACTTTTCTCGCCACTGCTTGGCACTTGTGGAAGTTAGTCATCTCTTCCTCACTCCTGATTaGCGTTTCTTCAGCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESGNFSRHCLALVEVSHLFLTPD*RFFSHS Trigger: AGAATGGCTGAAGAAACGTCAATCAGGAGTGAGGAA...GAGATGACTAACTTCCACAAGTGCCAAGCAGTGGCGAGAAAAGTTTCCTGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGTTAGGCCTTTTAAGTTCCCCTCTCCAGGTGTGGTAATCCAAAGGCTTGAACTTGGAGTGTGGTaGCATTTTTCCTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVRPFKFPSPGVVIQRLELGVW*HFSFFR Trigger: TCTGAAGAAGGAAAAATGTCACCACACTCCAAGTTC...AAGCCTTTGGATTACCACACCTGGAGAGGGGAACTTAAAAGGCCTAACTGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGTTAGGCCTTTTAAGTTCCCCTCTCCAGGTGTGGTAATCCAAAGGCTTTGCCTGAATAAAAGCTaGATCGGGGATCTCAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: SAVRPFKFPSPGVVIQRLCLNKS*IGDLNY Trigger: ATAGTTGAGATCCCCGATGCAGCTTTTATTCAGGCA...AAGCCTTTGGATTACCACACCTGGAGAGGGGAACTTAAAAGGCCTAACTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | CAAACATTGGAGTTTGCTGAAGATGGTTTTGATTCAGGCATGCTTCTGTGTGTCACTGCTTTCCTCATCTaGTGCTGCTCCCAGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLEFAEDGFDSGMLLCVTAFLI*CCSQMS Trigger: AGACATCTGGGAGCAGCAGCAGATGAGGAAAGCAGT...GACACACAGAAGCATGCCTGAATCAAAACCATCTTCAGCAAACTCCAATGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATTCCAAAGAAGAATATTTCGGAAGAGCTTTAGAGCTCCCCAGAACTGTCCGGGGATCTCAACTATaGGTGAAACGTCTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHSKEEYFGRALELPRTVRGSQL*VKRLFL Trigger: AAGAAAGAGACGTTTCACCCATAGTTGAGATCCCCG...GACAGTTCTGGGGAGCTCTAAAGCTCTTCCGAAATATTCTTCTTTGGAATGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR CAA 72 bp | CTCTGCAGTGCACTGTTAAACTTCTTGTCTGTGAGGTaGACAGGGGATCCCAAATGGTCTCTACAAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCSALLNFLSVR*TGDPKWSLQNL Trigger: CAGATTTTGTAGAGACCATTTGGGATCCCCTGTCAACCTCACAGACAAGAAGTTTAACAGTGCACTGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCCAAGCTTCCATTTGCCGATGTCTCATCTTTGCGTGATAACTGCTGCAAATGCCTGAATAAAAGCTaGATCGGGGATCTCAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: TAKLPFADVSSLRDNCCKCLNKS*IGDLNY Trigger: ATAGTTGAGATCCCCGATGCAGCTTTTATTCAGGCA...TTTGCAGCAGTTATCACGCAAAGATGAGACATCGGCAAATGGAAGCTTGGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR GCA 90 bp | CAAACATTGGAGTTTGCTGAAGATGGTTTTGATTCAGGCATGCTTCTGTGTGTCTTCCTCATCTGCTGCTaGTCCCAGATGTCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTLEFAEDGFDSGMLLCVFLICC*SQMSWF Trigger: AAACCAAGACATCTGGGAGCAGCAGCAGATGAGGAA...GACACACAGAAGCATGCCTGAATCAAAACCATCTTCAGCAAACTCCAATGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTACAAAATCTGTAAGTCGAGGAACAACTGTTTTGTTGATGACAGCAGCATCAGGATCGCTCTCTaGGTCCTCTTCATTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLYKICKSRNNCFVDDSSIRIAL*VLFIAS Trigger: AGAAGCAATGAAGAGGACCCAGAGAGCGATCCTGAT...GCTGCTGTCATCAACAAAACAGTTGTTCCTCGACTTACAGATTTTGTAGAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTCAGGCATGCTTCTGTGTGTCAGATTGCTTCATTTCCTTCCGGATTGAGGCACTCTCAAGATTCTaGATAGCCGTCTTTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQACFCVSDCFISFRIEALSRF*IAVFEL Trigger: GAGTTCAAAGACGGCTATCCAGAATCTTGAGAGTGC...CTCAATCCGGAAGGAAATGAAGCAATCTGACACACAGAAGCATGCCTGAATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR CCA 90 bp | GCATCACAATATGTTTTAAAGACGCTTGGAAGCTCACATGCCAGGCGTAATGGATCACCTTGGCACTTGTaGAAGTTAGTCATCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASQYVLKTLGSSHARRNGSPWHL*KLVISA Trigger: TGCAGAGATGACTAACTTCCACAAGTGCCAAGGTGA...TCCATTACGCCTGGCATGTGAGCTTCCAAGCGTCTTTAAAACATATTGTGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR CAA 72 bp | TCCACAGCCAAGCTTCCATTTGCCGATGTCTCATCTTaGCGTGATAACTGCTGCAAATATGATGATTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: STAKLPFADVSS*RDNCCKYDDSH Trigger: ATGCGAATCATCATATTTGCAGCAGTTATCACGCAAAGATGAGACATCGGCAAATGGAAGCTTGGCTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| 3UTR CAA 72 bp | CAAGCAACTGAACTCGTATCAGGGGACTTAAAAGCTTaGGTAAGCAGAAACCAACGAAGGCTTCATAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QATELVSGDLKA*VSRNQRRLHSR Trigger: CCTACTATGAAGCCTTCGTTGGTTTCTGCTTACCAAAGCTTTTAAGTCCCCTGATACGAGTTCAGTTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR TCA 90 bp | CAAACATTGGAGTTTGCTGAAGATGGTTTTGATTCAGGCATGCTTCTGTGTGTCTTCCTCACTCCTGATTaGCGTTTCTTCAGCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLEFAEDGFDSGMLLCVFLTPD*RFFSHS Trigger: AGAATGGCTGAAGAAACGTCAATCAGGAGTGAGGAA...GACACACAGAAGCATGCCTGAATCAAAACCATCTTCAGCAAACTCCAATGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | TTGATTCAGGCATGCTTCTGTGTGTCAGATTGCTTCATTTCCTTCCGGATTGAGGAAGTGGAGCAGGAGTaGTTTACATCCAATGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LIQACFCVSDCFISFRIEEVEQE*FTSNEM Trigger: CATTTCATTGGATGTAAACCACTCCTGCTCCACTTC...CTCAATCCGGAAGGAAATGAAGCAATCTGACACACAGAAGCATGCCTGAATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGTTAGGCCTTTTAAGTTCCCCTCTCCAGGTGTGGTAATCCAAAGGCTTATGAAGTTTTCTAGCTaGGGAATTGATGTCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SAVRPFKFPSPGVVIQRLMKFSS*GIDVLI Trigger: TATGAGGACATCAATTCCCCAGCTAGAAAACTTCAT...AAGCCTTTGGATTACCACACCTGGAGAGGGGAACTTAAAAGGCCTAACTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| 3UTR CAA 72 bp | CTGATCTGCAAACATTGGAGTTTGCTGAAGATGGTTTaGATTCAGGCATGCTTCTGTGTGTCAGATTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LICKHWSLLKMV*IQACFCVSDCF Trigger: GAAGCAATCTGACACACAGAAGCATGCCTGAATCAAAACCATCTTCAGCAAACTCCAATGTTTGCAGATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| 3UTR CAA 72 bp | TCCATAAACTCTGTTATAGCTGTGAACCAGGGCATCTaGTCTAGACCTATGGAGTCCATCTTAAGAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SINSVIAVNQGI*SRPMESILRGF Trigger: GAATCCTCTTAAGATGGACTCCATAGGTCTAGACAAGATGCCCTGGTTCACAGCTATAACAGAGTTTATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
||
| CDS-3UTR TCA 90 bp | TTAGCTGATCTGCAAACATTGGAGTTTGCTGAAGATGGTTTTGATTCAGGCATGAACTTCTTCAGGGTTTaGGACTTACTGCTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LADLQTLEFAEDGFDSGMNFFRV*DLLLWE Trigger: TTCCCACAGCAGTAAGTCTCAAACCCTGAAGAAGTT...CATGCCTGAATCAAAACCATCTTCAGCAAACTCCAATGTTTGCAGATCAGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAACCATCAGAGATGGACAGTGAAAGTTTGTTGTTTCTGGTTCTTAAGTGCTTTCCTCATCTGCTaGTGCTCCCAGATGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRNHQRWTVKVCCFWFLSAFLIC*CSQMSW Trigger: CCAAGACATCTGGGAGCAGCAGCAGATGAGGAAAGC...ACTTAAGAACCAGAAACAACAAACTTTCACTGTCCATCTCTGATGGTTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | GCATCACAATATGTTTTAAAGACGCTTGGAAGCTCACATGCCAGGCGTAATGGACCACATAACTTTTCATaGCCCTGTAGAATCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASQYVLKTLGSSHARRNGPHNFS*PCRICS Trigger: ACTACAGATTCTACAGGGGCATGAAAAGTTATGTGG...TCCATTACGCCTGGCATGTGAGCTTCCAAGCGTCTTTAAAACATATTGTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR GCA 90 bp | TTTGCTGAAGATGGTTTTGATTCAGGCATGCTTCTGTGTGTCAGATTGCTTCATGAAGTTAGTCATCTCTaGAGGAGACAGCTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: FAEDGFDSGMLLCVRLLHEVSHL*RRQLII Trigger: GATGATGAGCTGTCTCCTGCAGAGATGACTAACTTC...ATGAAGCAATCTGACACACAGAAGCATGCCTGAATCAAAACCATCTTCAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR CCA 90 bp | TTGATTCAGGCATGCTTCTGTGTGTCAGATTGCTTCATTTCCTTCCGGATTGAGGAGTGTTTGAGGCTTTaGGGTAAACAGTATTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LIQACFCVSDCFISFRIEECLRL*GKQYSL Trigger: AAGAGAATACTGTTTACCCCAAAGCCTCAAACACTC...CTCAATCCGGAAGGAAATGAAGCAATCTGACACACAGAAGCATGCCTGAATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGTTCTCCTGTATGCTTCATTTTCCTGAACCTGTTTCAGTGTTGACAATAAGTATTCTCTTTTCGTaGTCATCAGGATCGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLFSCMLHFPEPVSVLTISILFS*SSGSLS Trigger: AGAGAGCGATCCTGATGACCACGAAAAGAGAATACT...TATTGTCAACACTGAAACAGGTTCAGGAAAATGAAGCATACAGGAGAACAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAACCATCAGAGATGGACAGTGAAAGTTTGTTGTTTCTGGTTCTTAAGTATCAGGATCGCTCTCTaGGTCCTCTTCATTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRNHQRWTVKVCCFWFLSIRIAL*VLFIAS Trigger: AGAAGCAATGAAGAGGACCCAGAGAGCGATCCTGAT...ACTTAAGAACCAGAAACAACAAACTTTCACTGTCCATCTCTGATGGTTTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR CCA 90 bp | AACTCTAAAAGGGCAGTAGAGTTAGCATCACAATATGTTTTAAAGACGCTTGGATCTTACAGTCAGAAGTaGAGCAGGAGTGGTTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: NSKRAVELASQYVLKTLGSYSQK*SRSGLH Trigger: ATGTAAACCACTCCTGCTCCACTTCTGACTGTAAGA...TCCAAGCGTCTTTAAAACATATTGTGATGCTAACTCTACTGCCCTTTTAGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
||
| CDS-3UTR CAA 90 bp | TGTACTCTGGGCTGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCCCCCAGTCCCAGATCTaGCAAGGTGTCATCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CTLGWEGLQGTLFSEGFGPQSQI*QGVIWE Trigger: CTCCCAGATGACACCTTGCAAGATCTGGGACTGGGG...GCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCAGCCCAGAGTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203959.2 |
||
| CDS GCA 90 bp | TTCCCCGCTGACATTCCGTCTTCCAAGGTGGCTCTGTTTGTGCCATaGGCCGGGATCCTGACTGCTTTCCTCATCTGCTGCTGCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FPADIPSSKVALFVP*AGILTAFLICCCSQ Trigger: CTGGGAGCAGCAGCAGATGAGGAAAGCAGTCAGGATCCCGGCGCATGGCACAAACAGAGCCACCTTGGAAGACGGAATGTCAGCGGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| CDS-3UTR CAA 90 bp | ACTCTGGGCTGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTGTTCTTGTCTGTGAGGTaGACAGGGGATCCCAAATGG | + |
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Preference number: 5 (lower is better) Translates to: TLGWEGLQGTLFSEGFGLFLSVR*TGDPKW Trigger: CCATTTGGGATCCCCTGTCAACCTCACAGACAAGAA...CAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCAGCCCAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203959.2 |
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| CDS-3UTR CAA 90 bp | CCTGGCCACACCCCAAGTGGGCACCCAGCAAAGGCGGCATCGGCTGTGACACGGGGAAAGGTCTGTATTTaGTCCTTGTCCAGAGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: PGHTPSGHPAKAASAVTRGKVCI*SLSRVQ Trigger: TTGGACTCTGGACAAGGACAAAATACAGACCTTTCC...CCGTGTCACAGCCGATGCCGCCTTTGCTGGGTGCCCACTTGGGGTGTGGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| CDS-3UTR CAA 90 bp | ACTCTGGGCTGGGAGGGGCTCCAGGGGACGCTCTTCTCTGAGGGATTCGGCTTGCGAGGAACAACTGTTTaGTTGATGACAGCAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: TLGWEGLQGTLFSEGFGLRGTTV*LMTAAK Trigger: CTTGGCTGCTGTCATCAACAAAACAGTTGTTCCTCG...CAAGCCGAATCCCTCAGAGAAGAGCGTCCCCTGGAGCCCCTCCCAGCCCAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203959.2 |
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| CDS-3UTR CAA 90 bp | TCCAAGCACATTAGATGGCCCACAACCTCCTGGATTCCAGTTCCAGGGGACCTGCCCCAGTCCCAGATCTaGCAAGGTGTCATCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SKHIRWPTTSWIPVPGDLPQSQI*QGVIWE Trigger: CTCCCAGATGACACCTTGCAAGATCTGGGACTGGGG...CAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGCCATCTAATGTGCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS TCA 90 bp | TTCCGTCTTCCAAGGTGGCTCTGTTTGTGCCATGCGCCGGGATCCTaGCTGCTTTCCTCATCTGCTGCTGCTCCCAGATGTCTTGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: FRLPRWLCLCHAPGS*LLSSSAAAPRCLGF Trigger: AAAACCAAGACATCTGGGAGCAGCAGCAGATGAGGAAAGCAGTCAGGATCCCGGCGCATGGCACAAACAGAGCCACCTTGGAAGACGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| CDS-3UTR CAA 90 bp | CTGGATTCCAGTTCCAGGGGACCTGATGCCCTCTGGCCCCTACATGGAGGTAGTAAACTTCTTCAGGGTTaGAGACTTACTGCTGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LDSSSRGPDALWPLHGGSKLLQG*RLTAVG Trigger: TCCCACAGCAGTAAGTCTCAAACCCTGAAGAAGTTT...ACTACCTCCATGTAGGGGCCAGAGGGCATCAGGTCCCCTGGAACTGGAATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS-3UTR CAA 90 bp | TCCAAGCACATTAGATGGCCCACAACCTCCTGGATTCCAGTTCCAGGGGACCTGCAGCCAAGCTTCCATTaGCCGATGTCTCATCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: SKHIRWPTTSWIPVPGDLQPSFH*PMSHLC Trigger: GCAAAGATGAGACATCGGCAAATGGAAGCTTGGCTG...CAGGTCCCCTGGAACTGGAATCCAGGAGGTTGTGGGCCATCTAATGTGCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS-3UTR CAA 90 bp | TGTGGGTGCTGGGAAGGGAATGCCACTGAGTCTGTCCAGTCTCTGAGACACACATTCTTGTCTGTGAGGTaGACAGGGGATCCCAAATGG | + |
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Preference number: 5 (lower is better) Translates to: CGCWEGNATESVQSLRHTFLSVR*TGDPKW Trigger: CCATTTGGGATCCCCTGTCAACCTCACAGACAAGAA...TGTGTGTCTCAGAGACTGGACAGACTCAGTGGCATTCCCTTCCCAGCACCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS TCA 90 bp | ACTTACTGCTGTGGGAAAGGTCTGTATTTTGTCCCGCCGGGATCCTaGCTGCTTTCCTCATCTGCTGCTGCTCCCAGATGTCTTGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: TYCCGKGLYFVPPGS*LLSSSAAAPRCLGF Trigger: AAAACCAAGACATCTGGGAGCAGCAGCAGATGAGGAAAGCAGTCAGGATCCCGGCGGGACAAAATACAGACCTTTCCCACAGCAGTAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS-3UTR CAA 90 bp | GGGAGGGTGAAGATCTCTTCTGAGGACCTGGGTTTGGTTCCAAGCACATTAGATTCTGGGTCCTCTTCATaGCTTCTCTTACAGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: GRVKISSEDLGLVPSTLDSGSSS*LLLQSE Trigger: TTCTGACTGTAAGAGAAGCAATGAAGAGGACCCAGA...ATCTAATGTGCTTGGAACCAAACCCAGGTCCTCAGAAGAGATCTTCACCCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| CDS TCA 90 bp | TCACTCCTGATTGACGTTTCTTCAGCCATTCTTTGCCGGAGTGTTTaGGGCTTTGGGGTAAACAGTATTCTCTTTTCGTGGTCATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SLLIDVSSAILCRSV*GFGVNSILFSWSSG Trigger: TCCTGATGACCACGAAAAGAGAATACTGTTTACCCCAAAGCCTCAAACACTCCGGCAAAGAATGGCTGAAGAAACGTCAATCAGGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| CDS TCA 90 bp | TTCCTCATCTGCTGCTGCTCCCAGATGTCTTGGTTTTCATCTTCCTaGCTCTCTTCACTTGATTCCTCACTCCTGATTGACGTTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: FLICCCSQMSWFSSS*LSSLDSSLLIDVSS Trigger: TGAAGAAACGTCAATCAGGAGTGAGGAATCAAGTGAAGAGAGTCAGGAAGATGAAAACCAAGACATCTGGGAGCAGCAGCAGATGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| CDS-3UTR CAA 90 bp | TTTGCTGAAGATGGTTTTGATTCAGGCATGCTTCTGTGTGTCAGATTGCTTCATCGAGGAACAACTGTTTaGTTGATGACAGCAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: FAEDGFDSGMLLCVRLLHRGTTV*LMTAAK Trigger: CTTGGCTGCTGTCATCAACAAAACAGTTGTTCCTCG...ATGAAGCAATCTGACACACAGAAGCATGCCTGAATCAAAACCATCTTCAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS CCA 90 bp | TCAAAAACTTTCTTACAATCCTGTAAAATGTCACCTTGGCACTTGTaGAAGTTAGTCATCTCTGCAGGAGACAGCTCATCATCACTAGAC | + |
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Preference number: 5 (lower is better) Translates to: SKTFLQSCKMSPWHL*KLVISAGDSSSSLD Trigger: GTCTAGTGATGATGAGCTGTCTCCTGCAGAGATGACTAACTTCCACAAGTGCCAAGGTGACATTTTACAGGATTGTAAGAAAGTTTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS-3UTR CAA 90 bp | AACTCTAAAAGGGCAGTAGAGTTAGCATCACAATATGTTTTAAAGACGCTTGGATCTGGGTCCTCTTCATaGCTTCTCTTACAGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: NSKRAVELASQYVLKTLGSGSSS*LLLQSE Trigger: TTCTGACTGTAAGAGAAGCAATGAAGAGGACCCAGA...TCCAAGCGTCTTTAAAACATATTGTGATGCTAACTCTACTGCCCTTTTAGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS GCA 72 bp | TTCCTTCCTCTTCATCCGTTGAGAGCTCAGCTGTTCTaGATTCTGCTCCGCCGTCCCCGCGGGGAGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: FLPLHPLRAQLF*ILLRRPRGEQL Trigger: GAGCTGCTCCCCGCGGGGACGGCGGAGCAGAATGCAGAACAGCTGAGCTCTCAACGGATGAAGAGGAAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| CDS TCA 72 bp | CCAAGGTGGCTCTGTTTGTGCCATGCGCCGGGATCCTaGCTGCTTTCCTCATCTGCTGCTGCTCCCAGATGT | + |
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Preference number: 6 (lower is better) Translates to: PRWLCLCHAPGS*LLSSSAAAPRC Trigger: ACATCTGGGAGCAGCAGCAGATGAGGAAAGCAGTCAGGATCCCGGCGCATGGCACAAACAGAGCCACCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| CDS GCA 72 bp | GTGCCATGCGCCGGGATCCTGACTGCTTTCCTCATCTaGTGCTGCTCCCAGATGTCTTGGTTTTCATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VPCAGILTAFLI*CCSQMSWFSSS Trigger: GGAAGATGAAAACCAAGACATCTGGGAGCAGCAGCAGATGAGGAAAGCAGTCAGGATCCCGGCGCATGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| CDS TCA 72 bp | ACAGTCAGAAGTGGAGCAGGAGTGGTTTACATCCAATaGAATGTAGTCCCCTGGGGTCCTGGCCAACTCCCG | + |
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Preference number: 6 (lower is better) Translates to: TVRSGAGVVYIQ*NVVPWGPGQLP Trigger: CGGGAGTTGGCCAGGACCCCAGGGGACTACATTTCATTGGATGTAAACCACTCCTGCTCCACTTCTGACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| CDS TCA 72 bp | TGTGGGAAAGGTCTGTATTTTGTCCCGCCGGGATCCTaGCTGCTTTCCTCATCTGCTGCTGCTCCCAGATGT | + |
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Preference number: 6 (lower is better) Translates to: CGKGLYFVPPGS*LLSSSAAAPRC Trigger: ACATCTGGGAGCAGCAGCAGATGAGGAAAGCAGTCAGGATCCCGGCGGGACAAAATACAGACCTTTCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS TCA 72 bp | TCCTGTCAAGGTATGTGTTCCTTCCTCTTCATCCGTTaGGAGCTCAGCTGTTCTGCATTCTGCTCCGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: SCQGMCSFLFIR*ELSCSAFCSAV Trigger: GACGGCGGAGCAGAATGCAGAACAGCTGAGCTCTCAACGGATGAAGAGGAAGGAACACATACCTTGACAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| CDS GCA 72 bp | TTTTGTCCCGCCGGGATCCTGACTGCTTTCCTCATCTaGTGCTGCTCCCAGATGTCTTGGTTTTCATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FCPAGILTAFLI*CCSQMSWFSSS Trigger: GGAAGATGAAAACCAAGACATCTGGGAGCAGCAGCAGATGAGGAAAGCAGTCAGGATCCCGGCGGGACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS CAA 90 bp | CTTCTTCAGGGTTTGAGACTTACTGCTGTGGGAAAGGTCTGTATTTaGTCCCGCCGGGATCCTGACTGCTTTCCTCATCTGCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LLQGLRLTAVGKVCI*SRRDPDCFPHLLLL Trigger: GAGCAGCAGCAGATGAGGAAAGCAGTCAGGATCCCGGCGGGACAAAATACAGACCTTTCCCACAGCAGTAAGTCTCAAACCCTGAAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS CAA 72 bp | TTCCTGTCAAGGTATGTGTTCCTTCCTCTTCATCCGTaGAGAGCTCAGCTGTTCTGCATTCTGCTCCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: FLSRYVFLPLHP*RAQLFCILLRR Trigger: ACGGCGGAGCAGAATGCAGAACAGCTGAGCTCTCAACGGATGAAGAGGAAGGAACACATACCTTGACAGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| CDS CAA 72 bp | GGTTTGAGACTTACTGCTGTGGGAAAGGTCTGTATTTaGTCCCGCCGGGATCCTGACTGCTTTCCTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: GLRLTAVGKVCI*SRRDPDCFPHL Trigger: CAGATGAGGAAAGCAGTCAGGATCCCGGCGGGACAAAATACAGACCTTTCCCACAGCAGTAAGTCTCAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS TCA 72 bp | GGTCTGTATTTTGTCCTTGTCCAGAGTCCAACTGGATaGATGCAGTTCCCCGCTGACATTCCGTCTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GLYFVLVQSPTG*MQFPADIPSSK Trigger: CTTGGAAGACGGAATGTCAGCGGGGAACTGCATTCATCCAGTTGGACTCTGGACAAGGACAAAATACAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| CDS GCA 72 bp | TGTATTTTGTCCTTGTCCAGAGTCCAACTGGATGAATaGAGTTCCCCGCTGACATTCCGTCTTCCAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: CILSLSRVQLDE*SSPLTFRLPRW Trigger: CCACCTTGGAAGACGGAATGTCAGCGGGGAACTGCATTCATCCAGTTGGACTCTGGACAAGGACAAAATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152996.8 |
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| CDS TCA 72 bp | CATCTTCCTGACTCTCTTCACTTGATTCCTCACTCCTaGTTGACGTTTCTTCAGCCATTCTTTGCCGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: HLPDSLHLIPHS*LTFLQPFFAGV Trigger: CACTCCGGCAAAGAATGGCTGAAGAAACGTCAATCAGGAGTGAGGAATCAAGTGAAGAGAGTCAGGAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| CDS GCA 72 bp | TGGAAGTATCAAACTTCTTCAGGGTTTGAGACTTACTaGTGTGGGAAAGGTCTGTATTTTGTCCCGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: WKYQTSSGFETY*CGKGLYFVPPG Trigger: TCCCGGCGGGACAAAATACAGACCTTTCCCACAGCAGTAAGTCTCAAACCCTGAAGAAGTTTGATACTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS GCA 72 bp | AATGTCACCTTGGCACTTGTGGAAGTTAGTCATCTCTaGAGGAGACAGCTCATCATCACTAGACATCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: NVTLALVEVSHL*RRQLIITRHPF Trigger: GAAGGGATGTCTAGTGATGATGAGCTGTCTCCTGCAGAGATGACTAACTTCCACAAGTGCCAAGGTGACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS TCA 72 bp | CTGAATAAAAGCTGCATCGGGGATCTCAACTATGGGTaGAACGTCTCTTTCTTCCAGAGAGCAAGAGCTATC | + |
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Preference number: 6 (lower is better) Translates to: LNKSCIGDLNYG*NVSFFQRARAI Trigger: GATAGCTCTTGCTCTCTGGAAGAAAGAGACGTTTCACCCATAGTTGAGATCCCCGATGCAGCTTTTATTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| CDS CCA 72 bp | TTCTTCAGCCATTCTTTGCCGGAGTGTTTGAGGCTTTaGGGTAAACAGTATTCTCTTTTCGTGGTCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: FFSHSLPECLRL*GKQYSLFVVIR Trigger: CCTGATGACCACGAAAAGAGAATACTGTTTACCCCAAAGCCTCAAACACTCCGGCAAAGAATGGCTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043195.11 ENSMUST00000152996.8 |
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| CDS CCA 72 bp | TTCTTACAATCCTGTAAAATGTCACCTTGGCACTTGTaGAAGTTAGTCATCTCTGCAGGAGACAGCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: FLQSCKMSPWHL*KLVISAGDSSS Trigger: TGATGAGCTGTCTCCTGCAGAGATGACTAACTTCCACAAGTGCCAAGGTGACATTTTACAGGATTGTAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS CAA 72 bp | ACTTTCTTACAATCCTGTAAAATGTCACCTTGGCACTaGTGGAAGTTAGTCATCTCTGCAGGAGACAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TFLQSCKMSPWH*WKLVISAGDSS Trigger: TGAGCTGTCTCCTGCAGAGATGACTAACTTCCACAAGTGCCAAGGTGACATTTTACAGGATTGTAAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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| CDS CCA 72 bp | TCAAAAACTTTCTTACAATCCTGTAAAATGTCACCTTaGCACTTGTGGAAGTTAGTCATCTCTGCAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: SKTFLQSCKMSP*HLWKLVISAGD Trigger: GTCTCCTGCAGAGATGACTAACTTCCACAAGTGCCAAGGTGACATTTTACAGGATTGTAAGAAAGTTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043195.11 |
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