Pregenerated sensors for GCC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029708Ensembl transcript IDs: ENSMUST00000064377.7, ENSMUST00000090511.4, ENSMUST00000165455.2
Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTGGACCAAACAGGACCACTTTGGAGATCGCTAAGCTCACATGGCTaGTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTT | + |
Preference number: 1 (lower is better) Translates to: LDQTGPLWRSLSSHG*SGPSLGWAQRAQLV Trigger: AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAGCTTAGCGATCTCCAAAGTGGTCCTGTTTGGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR CCA 90 bp | CTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCTaGAAGCAAGGTTCCAAGTTTTGGGAGGAACTCACTAGTCCTCAG | + |
Preference number: 1 (lower is better) Translates to: LGTLSGMGTKGSAGS*KQGSKFWEELTSPQ Trigger: CTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCAGGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR CCA 90 bp | GGCACAAAGGGCTCAGCTGGTTCCTGGAAGCAAGGTTCCAAGTTTTaGGAGGAACTCACTAGTCCTCAGCCCTTGGGACAAACCGTCACT | + |
Preference number: 1 (lower is better) Translates to: GTKGSAGSWKQGSKF*EELTSPQPLGQTVT Trigger: AGTGACGGTTTGTCCCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCAGGAACCAGCTGAGCCCTTTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR GCA 90 bp | CATGTTGAAGGGAAGACCATGAAGTCATCACTCCCACTCTCTGCCTaGCTTAAGCAGGAGAGGTTTGTTTTTAACCCCGTCCTGGACCAA | + |
Preference number: 1 (lower is better) Translates to: HVEGKTMKSSLPLSA*LKQERFVFNPVLDQ Trigger: TTGGTCCAGGACGGGGTTAAAAACAAACCTCTCCTGCTTAAGGCAGGCAGAGAGTGGGAGTGATGACTTCATGGTCTTCCCTTCAACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR CCA 90 bp | CTTTTTCCTGTCCCTGCAAAAGCAAACACAGCTGGGAATACATCTTaGCAGAAATTCCTCGTATCCCTGCAGGTCCCGGCTTACTGTCCA | + |
Preference number: 1 (lower is better) Translates to: LFPVPAKANTAGNTS*QKFLVSLQVPAYCP Trigger: TGGACAGTAAGCCGGGACCTGCAGGGATACGAGGAATTTCTGCCAAGATGTATTCCCAGCTGTGTTTGCTTTTGCAGGGACAGGAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR GCA 90 bp | AACCTCTGCCAGGATCATAGGGCAGAAAGTATTTCAGCTGAACTCTaGTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCA | + |
Preference number: 1 (lower is better) Translates to: NLCQDHRAESISAEL*FSWEGPNSVLESAA Trigger: TGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTATGATCCTGGCAGAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR TCA 90 bp | AAAGATGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATaGAGTCATCACTCCCACTCTCTGCCTGCCTTAAGCAGGAGAGGT | + |
Preference number: 1 (lower is better) Translates to: KDVISSTSSMLKGRP*SHHSHSLPALSRRG Trigger: ACCTCTCCTGCTTAAGGCAGGCAGAGAGTGGGAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACATCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR GCA 90 bp | GCAGAAATTCCTCGTATCCCTGCAGGTCCCGGCTTACTGTCCAAATaGTCTGAAAGAAGCAAAGATGTCATCTCTTCTACAAGCTCCATG | + |
Preference number: 1 (lower is better) Translates to: AEIPRIPAGPGLLSK*SERSKDVISSTSSM Trigger: CATGGAGCTTGTAGAAGAGATGACATCTTTGCTTCTTTCAGAGCATTTGGACAGTAAGCCGGGACCTGCAGGGATACGAGGAATTTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR CCA 90 bp | AGCAAATTACCTCCTTTTTCCTGTCCCTGCAAAAGCAAACACAGCTaGGAATACATCTTGGCAGAAATTCCTCGTATCCCTGCAGGTCCC | + |
Preference number: 1 (lower is better) Translates to: SKLPPFSCPCKSKHS*EYILAEIPRIPAGP Trigger: GGGACCTGCAGGGATACGAGGAATTTCTGCCAAGATGTATTCCCAGCTGTGTTTGCTTTTGCAGGGACAGGAAAAAGGAGGTAATTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR CCA 90 bp | CAGGATCATAGGGCAGAAAGTATTTCAGCTGAACTCTGCTTTTCCTaGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACCTC | + |
Preference number: 1 (lower is better) Translates to: QDHRAESISAELCFS*EGPNSVLESAANYL Trigger: GAGGTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTATGATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR TCA 90 bp | AATTCCTCGTATCCCTGCAGGTCCCGGCTTACTGTCCAAATGCTCTaGAAGAAGCAAAGATGTCATCTCTTCTACAAGCTCCATGTTGAA | + |
Preference number: 1 (lower is better) Translates to: NSSYPCRSRLTVQML*KKQRCHLFYKLHVE Trigger: TTCAACATGGAGCTTGTAGAAGAGATGACATCTTTGCTTCTTTCAGAGCATTTGGACAGTAAGCCGGGACCTGCAGGGATACGAGGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR GCA 90 bp | GAAATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTaGCCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGT | + |
Preference number: 1 (lower is better) Translates to: EINKNAREEAVEIRA*PSHNKRGTEISGVG Trigger: ACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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3UTR-3UTR CCA 90 bp | TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTTGCATTAATGGCACTTaGCAGATAATCCCATTCTAC | + |
Preference number: 2 (lower is better) Translates to: SHGCSGPSLGWAQRAQLVCINGT*QIIPFY Trigger: GTAGAATGGGATTATCTGCCAAGTGCCATTAATGCA...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR TCA 90 bp | ACCATTTCCCTAACTCGCACCTCCTACCCCCAGCCTTTCTCCCTAACCTGCTCCAATCCCATTCTACTTTaGACTGCTCTGAGTTCAACA | + |
Preference number: 2 (lower is better) Translates to: TISLTRTSYPQPFSLTCSNPILL*TALSST Trigger: TGTTGAACTCAGAGCAGTTCAAAGTAGAATGGGATT...GGAGCAGGTTAGGGAGAAAGGCTGGGGGTAGGAGGTGCGAGTTAGGGAAATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR CCA 90 bp | CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACCTAGTCCTCAGCCCTTaGGACAAACCGTCACTGTTT | + |
Preference number: 2 (lower is better) Translates to: LCFSWEGPNSVLESAANYLVLSP*DKPSLF Trigger: AAACAGTGACGGTTTGTCCCAAGGGCTGAGGACTAG...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR GCA 90 bp | CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTATTTCAGCTGAACTCTaGTTTTCCTGGGAGGGTCCT | + |
Preference number: 2 (lower is better) Translates to: QQPQDIFSEGARQRNEGSISAEL*FSWEGP Trigger: AGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAAT...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR TCA 90 bp | CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTGGTCTCTTCCTAGCTTaGTGTATGTCCCCAGAGAAT | + |
Preference number: 2 (lower is better) Translates to: QLKSLRFNDHCYYYKDITGLFLA*CMSPEN Trigger: ATTCTCTGGGGACATACATCAAGCTAGGAAGAGACC...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR GCA 90 bp | CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTTTAATCAAAGTTTTCTaGACCCCAAACCCTCACAAA | + |
Preference number: 2 (lower is better) Translates to: QQPQDIFSEGARQRNEGSLIKVF*TPNPHK Trigger: TTTGTGAGGGTTTGGGGTGCAGAAAACTTTGATTAA...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR CCA 90 bp | TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGACTGTTTTTAACTCCCTaGTCTCTTCCTAGCTTGATG | + |
Preference number: 2 (lower is better) Translates to: LLLLQRHHFCSIEVCSRRLFLTP*SLPSLM Trigger: CATCAAGCTAGGAAGAGACCAGGGAGTTAAAAACAG...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR TCA 90 bp | CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTACTGTCCAAATGCTCTaGAAGAAGCAAAGATGTCAT | + |
Preference number: 2 (lower is better) Translates to: QLKSLRFNDHCYYYKDITTVQML*KKQRCH Trigger: ATGACATCTTTGCTTCTTTCAGAGCATTTGGACAGT...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR CCA 90 bp | AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATAAAAGCAAACACAGCTaGGAATACATCTTGGCAGAA | + |
Preference number: 2 (lower is better) Translates to: RCIDTTIKKTQLKSLRFNKSKHS*EYILAE Trigger: TTCTGCCAAGATGTATTCCCAGCTGTGTTTGCTTTT...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR CCA 72 bp | CTAAGCTCACATGGCTGCTCGGGACCCTCTCTGGGATaGGCACAAAGGGCTCAGCTGGTTCCTGGAAGCAAG | + |
Preference number: 3 (lower is better) Translates to: LSSHGCSGPSLG*AQRAQLVPGSK Trigger: CTTGCTTCCAGGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAGCTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR GCA 72 bp | ACAGGACCACTTTGGAGATCGCTAAGCTCACATGGCTaGTCGGGACCCTCTCTGGGATGGGCACAAAGGGCT | + |
Preference number: 3 (lower is better) Translates to: TGPLWRSLSSHG*SGPSLGWAQRA Trigger: AGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAGCTTAGCGATCTCCAAAGTGGTCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR CCA 72 bp | GGCTCAGCTGGTTCCTGGAAGCAAGGTTCCAAGTTTTaGGAGGAACTCACTAGTCCTCAGCCCTTGGGACAA | + |
Preference number: 3 (lower is better) Translates to: GSAGSWKQGSKF*EELTSPQPLGQ Trigger: TTGTCCCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCAGGAACCAGCTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR GCA 72 bp | GGGAAGACCATGAAGTCATCACTCCCACTCTCTGCCTaGCTTAAGCAGGAGAGGTTTGTTTTTAACCCCGTC | + |
Preference number: 3 (lower is better) Translates to: GKTMKSSLPLSA*LKQERFVFNPV Trigger: GACGGGGTTAAAAACAAACCTCTCCTGCTTAAGGCAGGCAGAGAGTGGGAGTGATGACTTCATGGTCTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR GCA 72 bp | CCTCGTATCCCTGCAGGTCCCGGCTTACTGTCCAAATaGTCTGAAAGAAGCAAAGATGTCATCTCTTCTACA | + |
Preference number: 3 (lower is better) Translates to: PRIPAGPGLLSK*SERSKDVISST Trigger: TGTAGAAGAGATGACATCTTTGCTTCTTTCAGAGCATTTGGACAGTAAGCCGGGACCTGCAGGGATACGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR TCA 72 bp | CCACTACGAGATGCTGTCTCAATACTGGCAGTACCCTaGGAGCCCAAGGATAAAACTGCATTAATGGCACTT | + |
Preference number: 3 (lower is better) Translates to: PLRDAVSILAVP*EPKDKTALMAL Trigger: AAGTGCCATTAATGCAGTTTTATCCTTGGGCTCTCAGGGTACTGCCAGTATTGAGACAGCATCTCGTAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR TCA 72 bp | TATCCCTGCAGGTCCCGGCTTACTGTCCAAATGCTCTaGAAGAAGCAAAGATGTCATCTCTTCTACAAGCTC | + |
Preference number: 3 (lower is better) Translates to: YPCRSRLTVQML*KKQRCHLFYKL Trigger: GAGCTTGTAGAAGAGATGACATCTTTGCTTCTTTCAGAGCATTTGGACAGTAAGCCGGGACCTGCAGGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR GCA 72 bp | CAGGATCATAGGGCAGAAAGTATTTCAGCTGAACTCTaGTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAA | + |
Preference number: 3 (lower is better) Translates to: QDHRAESISAEL*FSWEGPNSVLE Trigger: TTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTATGATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR CCA 72 bp | CCTCCTTTTTCCTGTCCCTGCAAAAGCAAACACAGCTaGGAATACATCTTGGCAGAAATTCCTCGTATCCCT | + |
Preference number: 3 (lower is better) Translates to: PPFSCPCKSKHS*EYILAEIPRIP Trigger: AGGGATACGAGGAATTTCTGCCAAGATGTATTCCCAGCTGTGTTTGCTTTTGCAGGGACAGGAAAAAGGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR TCA 72 bp | GAAGCAAAGATGTCATCTCTTCTACAAGCTCCATGTTaGAGGGAAGACCATGAAGTCATCACTCCCACTCTC | + |
Preference number: 3 (lower is better) Translates to: EAKMSSLLQAPC*REDHEVITPTL Trigger: GAGAGTGGGAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACATCTTTGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR TCA 72 bp | CTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTaGGGTATCCCTCCCTGGAGTGAAGCTCATGGATTT | + |
Preference number: 3 (lower is better) Translates to: LRNLLSVRQLKP*GIPPWSEAHGF Trigger: AAATCCATGAGCTTCACTCCAGGGAGGGATACCTCAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR CAA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACCGGAGATTTCAGGAGTaGGTAAGAAAACAAAAAGTA | + |
Preference number: 3 (lower is better) Translates to: INKNAREEAVEIRACPSHRRFQE*VRKQKV Trigger: TACTTTTTGTTTTCTTACCAACTCCTGAAATCTCCG...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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3UTR TCA 72 bp | TACATACATAGTTACTGTATATGTTCCAAAGTCAGATaGCCTCCCCTGGGAGTCACATTTATTCCTAGCTCT | + |
Preference number: 3 (lower is better) Translates to: YIHSYCICSKVR*PPLGVTFIPSS Trigger: AGAGCTAGGAATAAATGTGACTCCCAGGGGAGGTCATCTGACTTTGGAACATATACAGTAACTATGTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR CAA 90 bp | ATAACTTTCCAGGGTACCATGAATCCTGATTGTAGTGAAAAAGAAGCACTCATAATTAATGGCCAAACATaGATCTTTCAGGTCCAAAGG | + |
Preference number: 3 (lower is better) Translates to: ITFQGTMNPDCSEKEALIINGQT*IFQVQR Trigger: CCTTTGGACCTGAAAGATCAATGTTTGGCCATTAAT...TATGAGTGCTTCTTTTTCACTACAATCAGGATTCATGGTACCCTGGAAAGTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR-3UTR CAA 90 bp | CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTCGGAGATTTCAGGAGTaGGTAAGAAAACAAAAAGTA | + |
Preference number: 3 (lower is better) Translates to: QLKSLRFNDHCYYYKDITRRFQE*VRKQKV Trigger: TACTTTTTGTTTTCTTACCAACTCCTGAAATCTCCG...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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3UTR TCA 72 bp | GAATTGGCAACTCATAGTGCTTTGACCCAAATTTTCTaGGAGCTACTTTCCTTAAAGAACAGAATTAACCAA | + |
Preference number: 3 (lower is better) Translates to: ELATHSALTQIF*ELLSLKNRINQ Trigger: TTGGTTAATTCTGTTCTTTAAGGAAAGTAGCTCTCAGAAAATTTGGGTCAAAGCACTATGAGTTGCCAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | CTCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTAGCCTTTCCTGCAGCTaGTGGGCTTCTACCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: LTWLLGTLSGMGTKGSAGSLSCS*WASTSS Trigger: GCTGGAGGTAGAAGCCCATCAGCTGCAGGAAAGGCT...ACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTAGACTTTGGGGGAAGTaGTCCACGGGCCGCTCTGTC | + |
Preference number: 4 (lower is better) Translates to: SHGCSGPSLGWAQRAQLVRLWGK*STGRSV Trigger: GACAGAGCGGCCCGTGGACCACTTCCCCCAAAGTCT...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTTCCCTGAAGTCCAGCTaGCTGCGCTCCAGTTCCTGC | + |
Preference number: 4 (lower is better) Translates to: SHGCSGPSLGWAQRAQLVSLKSS*LRSSSC Trigger: GCAGGAACTGGAGCGCAGCCAGCTGGACTTCAGGGA...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ACCATTTCCCTAACTCGCACCTCCTACCCCCAGCCTTTCTCCCTAACCTGCTCCCGAAGTTCCAGGTCCTaGCGCTGGGTCCTCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: TISLTRTSYPQPFSLTCSRSSRS*RWVLSS Trigger: GGAGGAGAGGACCCAGCGCCAGGACCTGGAACTTCG...GGAGCAGGTTAGGGAGAAAGGCTGGGGGTAGGAGGTGCGAGTTAGGGAAATGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTACTAACGCCACTCTCTaGCCCACTGGCCTCTTCAGA | + |
Preference number: 4 (lower is better) Translates to: SHGCSGPSLGWAQRAQLVTNATL*PTGLFR Trigger: TCTGAAGAGGCCAGTGGGTCAGAGAGTGGCGTTAGT...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | ACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCACCTCTCGGGTCAGCTaGTTGGTCTGCAGTTCAAAC | + |
Preference number: 4 (lower is better) Translates to: TWLLGTLSGMGTKGSAGSTSRVS*LVCSSN Trigger: GTTTGAACTGCAGACCAAGCAGCTGACCCGAGAGGT...GGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCCCTTCAGCTTCTGGATaGCCAGCTGGTCTTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: TWLLGTLSGMGTKGSAGSPSASG*PAGLSA Trigger: AGCAGAAAGACCAGCTGGCCATCCAGAAGCTGAAGG...GGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTGCTGGTCTTTCTGCTTaGCTTTCTCGTAGGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: SHGCSGPSLGWAQRAQLVAGLSA*LSRRCP Trigger: TGGGCACCTACGAGAAAGCCAAGCAGAAAGACCAGC...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CTCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCATCTCGAATGGTTTaGAGCTCACCTTTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: LTWLLGTLSGMGTKGSAGSSRMV*SSPFSS Trigger: GGAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGA...ACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | TGGAAGCAAGGTTCCAAGTTTTGGGAGGAACTCACTAGTCCTCAGCCCTTGGGAAGCCGGGCCAGTTCCTaGTTCCAGTCCTCAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: WKQGSKFWEELTSPQPLGSRASS*FQSSAS Trigger: GGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCT...TCCCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACATGGCGGTGAGCGTCTaGTGGCGGCCCAGGCTGTCG | + |
Preference number: 4 (lower is better) Translates to: LCFSWEGPNSVLESAANYMAVSV*WRPRLS Trigger: CGACAGCCTGGGCCGCCAGCAGACGCTCACCGCCAT...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCACATACAGACCACTACGAGATGCTGTCTCAATACTGGCAGTACCCTGAGAGCCAGTCCTCAGCCTCCTaGTGGTGCTGGCTTTCCAGC | + |
Preference number: 4 (lower is better) Translates to: PHTDHYEMLSQYWQYPESQSSAS*WCWLSS Trigger: GCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGACTG...GCTCTCAGGGTACTGCCAGTATTGAGACAGCATCTCGTAGTGGTCTGTATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
||
CDS-3UTR GCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATGCCGATGGAGCTGCTaGAGCCGGGCCAGTTCCTGC | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRCRWSC*SRASSC Trigger: GCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR GCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATTCCTGCCGATGGAGCTaGTGCAGCCGGGCCAGTTCC | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNSCRWS*CSRASS Trigger: GGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGA...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR GCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGGGCCCGGTCCCGCTaGTTGTGTAGCTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKRARSR*LCSSSS Trigger: GGAGGAGGAGCTACACAAGCAGCGGGACCGGGCCCT...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCTCCCACGGGGCTTCTaGGTCCTGGCAACCCAGAGG | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNLPRGF*VLATQR Trigger: CCTCTGGGTTGCCAGGACGCAGAAGCCCCGTGGGAG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR CCA 90 bp | CTCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTCCTCTGCCTTTTTATTaGCATCCTCTAAGTCCTGCT | + |
Preference number: 4 (lower is better) Translates to: LTWLLGTLSGMGTKGSAGPLPFY*HPLSPA Trigger: AGCAGGACTTAGAGGATGCCAATAAAAAGGCAGAGG...ACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
||
CDS-3UTR GCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGCCGGGCCAGTTCCTaGTTCCAGTCCTCAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKSRASS*FQSSAS Trigger: GGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCT...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR CCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTCCAGGTCCTGGCGCTaGGTCCTCTCCTCCTGCAAG | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHSRSWR*VLSSCK Trigger: CTTGCAGGAGGAGAGGACCCAGCGCCAGGACCTGGA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATTCCAGGTCCTGGCGCTaGGTCCTCTCCTCCTGCAAG | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNSRSWR*VLSSCK Trigger: CTTGCAGGAGGAGAGGACCCAGCGCCAGGACCTGGA...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR CCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCGAAGTTCCAGGTCCTaGCGCTGGGTCCTCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNRSSRS*RWVLSS Trigger: GGAGGAGAGGACCCAGCGCCAGGACCTGGAACTTCG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACGGGGCTTCTGCGTCCTaGCAACCCAGAGGACAAGGC | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHGASAS*QPRGQG Trigger: GCCTTGTCCTCTGGGTTGCCAGGACGCAGAAGCCCC...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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3UTR CAA 72 bp | CACTCCCACTCTCTGCCTGCCTTAAGCAGGAGAGGTTaGTTTTTAACCCCGTCCTGGACCAAACAGGACCAC | + |
Preference number: 4 (lower is better) Translates to: HSHSLPALSRRG*FLTPSWTKQDH Trigger: GTGGTCCTGTTTGGTCCAGGACGGGGTTAAAAACAAACCTCTCCTGCTTAAGGCAGGCAGAGAGTGGGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGAGTGCTGTCCTCACTGTaGGTGGAGCACCGGTCATCC | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRVLSSL*VEHRSS Trigger: GGATGACCGGTGCTCCACTCACAGTGAGGACAGCAC...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTTGTCCTTCAAGACATTaGTATCCAGACTGGATTCGT | + |
Preference number: 4 (lower is better) Translates to: SHGCSGPSLGWAQRAQLVCPSRH*YPDWIR Trigger: ACGAATCCAGTCTGGATATCAATGTCTTGAAGGACA...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAACTGGGTCAAGCTATCTaGGGAGGCTGTGTCGGCTGG | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKLGQAI*GGCVGW Trigger: CCAGCCGACACAGCCTCCTCAGATAGCTTGACCCAG...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTGGAAGCAAGGTTCCAAGTTTTGGGAGGAACTCACTAGTCCTCAGCCCTTGGGCGGGCTTTGGTTTCTaGTATCTGCTCTTGCAGCAC | + |
Preference number: 4 (lower is better) Translates to: PGSKVPSFGRNSLVLSPWAGFGF*YLLLQH Trigger: GTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGC...CCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGAGGCATATGCCCGCCCTaGCAAGGCTTCTCTGGTCTC | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRGICPP*QGFSGL Trigger: GAGACCAGAGAAGCCTTGGCAGGGCGGGCATATGCC...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCTGATCAGCGGCATATaGCCGCCCTGCCAAGGCTTC | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNLISGI*PPCQGF Trigger: GAAGCCTTGGCAGGGCGGGCATATGCCGCTGATCAG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATTCAGCTCTGCGAGCTaGTCCTGTGCTGCCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKFSSAS*SCAASS Trigger: GCTGGAGGCAGCACAGGAGCAGCTCGCAGAGCTGAA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACTTCAGCTCTGCGAGCTaGTCCTGTGCTGCCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: LCFSWEGPNSVLESAANYFSSAS*SCAASS Trigger: GCTGGAGGCAGCACAGGAGCAGCTCGCAGAGCTGAA...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCTCCTGCCGATGGAGCTaGTGCAGCCGGGCCAGTTCC | + |
Preference number: 4 (lower is better) Translates to: CHLFYKLHVEGKTMKSSLSCRWS*CSRASS Trigger: GGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGA...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCAGGGCCCGGTCCCGCTaGTTGTGTAGCTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: CHLFYKLHVEGKTMKSSLRARSR*LCSSSS Trigger: GGAGGAGGAGCTACACAAGCAGCGGGACCGGGCCCT...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAGGCCTCTTCAGACTTTaGGGGAAGTGGTCCACGGGC | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKGLFRL*GKWSTG Trigger: GCCCGTGGACCACTTCCCCCAAAGTCTGAAGAGGCC...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACCTGCAGCCGGGGGTCTaGTCGGTTCTTCTCATCTCG | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHLQPGV*SVLLIS Trigger: CGAGATGAGAAGAACCGACCAGACCCCCGGCTGCAG...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGAGCCTCCTGCTGGTGCTaGCTTTCCAGCTCCTCACAG | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRASCWC*LSSSSQ Trigger: CTGTGAGGAGCTGGAAAGCCAGCACCAGCAGGAGGC...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTTCCAGTTCCTGCCGATaGAGCTGCTGCAGCCGGGCC | + |
Preference number: 4 (lower is better) Translates to: QQPQDIFSEGARQRNEGSSSSCR*SCCSRA Trigger: GGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGA...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTCCCTGAAGTCCAGCTaGCTGCGCTCCAGTTCCTGC | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHSLKSS*LRSSSC Trigger: GCAGGAACTGGAGCGCAGCCAGCTGGACTTCAGGGA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAGGGCAGAAAGTATTTCAGCTGAACTCTGCTTTTCCTGGGAGGGTCCTAACAGGGGCTTCTGCGTCCTaGCAACCCAGAGGACAAGGC | + |
Preference number: 4 (lower is better) Translates to: IGQKVFQLNSAFPGRVLTGASAS*QPRGQG Trigger: GCCTTGTCCTCTGGGTTGCCAGGACGCAGAAGCCCC...TGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGAAGAAGGTGGGCTCGTTaGCTGCAGCAAGCTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRRRWAR*LQQAAG Trigger: CCCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCT...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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3UTR CAA 72 bp | TGTCCCTGCAAAAGCAAACACAGCTGGGAATACATCTaGGCAGAAATTCCTCGTATCCCTGCAGGTCCCGGC | + |
Preference number: 4 (lower is better) Translates to: CPCKSKHSWEYI*AEIPRIPAGPG Trigger: GCCGGGACCTGCAGGGATACGAGGAATTTCTGCCAAGATGTATTCCCAGCTGTGTTTGCTTTTGCAGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATGCTTCCTCAGAGATGTaGTCTCCACCTCCTTGCGGG | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNASSEM*SPPPCG Trigger: CCCGCAAGGAGGTGGAGATCACATCTCTGAGGAAGC...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAGCCTTTCCTGCAGCTaGTGGGCTTCTACCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNSLSCS*WASTSS Trigger: GCTGGAGGTAGAAGCCCATCAGCTGCAGGAAAGGCT...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATGGGCACGATCGTGCTaGTGTGTAATGAGGCGGGCT | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRWARSC*CVMRRA Trigger: AGCCCGCCTCATTACACAGCAGCACGATCGTGCCCA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGAAAGGCATGGTCACTCTaGTCCTGGGCACGATCGTGC | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRKAWSL*SWARSC Trigger: GCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTT...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAACTTGTCCTTCAGCTCTaGGAGCTGCTCCTGTGCTGC | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKLVLQL*ELLLCC Trigger: GCAGCACAGGAGCAGCTCGCAGAGCTGAAGGACAAG...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCTTGTCCTTCAGCTCTaGGAGCTGCTCCTGTGCTGC | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNLVLQL*ELLLCC Trigger: GCAGCACAGGAGCAGCTCGCAGAGCTGAAGGACAAG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATTGGCTGCAGCAAGCTaGAGGGCCTGGGTCAAGCTA | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRLAAAS*RAWVKL Trigger: TAGCTTGACCCAGGCCCTGCAGCTTGCTGCAGCCAA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATGGCGGTGAGCGTCTaGTGGCGGCCCAGGCTGTCG | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKMAVSV*WRPRLS Trigger: CGACAGCCTGGGCCGCCAGCAGACGCTCACCGCCAT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTAGTCCTCAGCCCTTGGGACAAACCGTCACTGTTTTTAACTCCCTGGTCTCTTCCTACATCCGCCTCGTaGGATACCGACAGTACCTTG | + |
Preference number: 4 (lower is better) Translates to: LVLSPWDKPSLFLTPWSLPTSAS*DTDSTL Trigger: CAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGG...AAGAGACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCAAGGGCTGAGGACTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACCTCACTACCGGCAGATaGCCCATCCCCACTGCTACT | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHLTTGR*PIPTAT Trigger: AGTAGCAGTGGGGATGGGCCATCTGCCGGTAGTGAG...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGACTCACTACCGGCAGATaGCCCATCCCCACTGCTACT | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRLTTGR*PIPTAT Trigger: AGTAGCAGTGGGGATGGGCCATCTGCCGGTAGTGAG...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTGGTCACTCTGCTCCTaGGCACGATCGTGCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHWSLCS*ARSCCC Trigger: ACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAACGCAGCATCAAGGCATaGTCACTCTGCTCCTGGGCA | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKRSIKA*SLCSWA Trigger: TGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCG...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTGACTGCTGGCGGAGCTaGTCCTCTGCAAGGGCTGTC | + |
Preference number: 4 (lower is better) Translates to: QQPQDIFSEGARQRNEGSDCWRS*SSARAV Trigger: GACAGCCCTTGCAGAGGACCAGCTCCGCCAGCAGTC...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CCACATACAGACCACTACGAGATGCTGTCTCAATACTGGCAGTACCCTGAGAGCACATCCAGGGTCACCTaGCTTTTCCTAGCTGCAACC | + |
Preference number: 4 (lower is better) Translates to: PHTDHYEMLSQYWQYPESTSRVT*LFLAAT Trigger: GGTTGCAGCTAGGAAAAGCCAGGTGACCCTGGATGT...GCTCTCAGGGTACTGCCAGTATTGAGACAGCATCTCGTAGTGGTCTGTATGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
||
CDS-3UTR TCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACCACGCACCACATCCTTaGGTCTTGCCTGGTACTGGA | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHHAPHP*VLPGTG Trigger: TCCAGTACCAGGCAAGACTCAAGGATGTGGTGCGTG...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACACTAACGCCACTCTCTaGCCCACTGGCCTCTTCAGA | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHTNATL*PTGLFR Trigger: TCTGAAGAGGCCAGTGGGTCAGAGAGTGGCGTTAGT...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATCCTGCAAGAGCTTCTaGAGCTCGCGCAGCATCAAG | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRSCKSF*SSRSIK Trigger: CTTGATGCTGCGCGAGCTTCAGAAGCTCTTGCAGGA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTTCTCCAGGTCCAGCTaGAGAAGTCGCTCCTTCAGC | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHFSRSS*RSRSFS Trigger: GCTGAAGGAGCGACTTCTGCAGCTGGACCTGGAGAA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTGCCGATGGAGCTGCTaGAGCCGGGCCAGTTCCTGC | + |
Preference number: 4 (lower is better) Translates to: HTQFQPKKFVICQAVKALCRWSC*SRASSC Trigger: GCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAACTCCCACGGGGCTTCTaGGTCCTGGCAACCCAGAGG | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKLPRGF*VLATQR Trigger: CCTCTGGGTTGCCAGGACGCAGAAGCCCCGTGGGAG...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTGTCCTCACTGTGAGTaGAGCACCGGTCATCCACAG | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHCPHCE*STGHPQ Trigger: CTGTGGATGACCGGTGCTCCACTCACAGTGAGGACA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATGTCCTCACTGTGAGTaGAGCACCGGTCATCCACAG | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRCPHCE*STGHPQ Trigger: CTGTGGATGACCGGTGCTCCACTCACAGTGAGGACA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAGGGCAGAAAGTATTTCAGCTGAACTCTGCTTTTCCTGGGAGGGTCCTAACACGCAGCATCAAGGCATaGTCACTCTGCTCCTGGGCA | + |
Preference number: 4 (lower is better) Translates to: IGQKVFQLNSAFPGRVLTRSIKA*SLCSWA Trigger: TGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCG...TGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACCGCTCCTTCAGCTTCTaGATGGCCAGCTGGTCTTTC | + |
Preference number: 4 (lower is better) Translates to: LCFSWEGPNSVLESAANYRSFSF*MASWSF Trigger: GAAAGACCAGCTGGCCATCCAGAAGCTGAAGGAGCG...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCGCCTCCTGCTGGTGCTaGCTTTCCAGCTCCTCACAG | + |
Preference number: 4 (lower is better) Translates to: CHLFYKLHVEGKTMKSSLASCWC*LSSSSQ Trigger: CTGTGAGGAGCTGGAAAGCCAGCACCAGCAGGAGGC...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | ATAGGGCAGAAAGTATTTCAGCTGAACTCTGCTTTTCCTGGGAGGGTCCTAACACACGCACCACATCCTTaGGTCTTGCCTGGTACTGGA | + |
Preference number: 4 (lower is better) Translates to: IGQKVFQLNSAFPGRVLTHAPHP*VLPGTG Trigger: TCCAGTACCAGGCAAGACTCAAGGATGTGGTGCGTG...TGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATCAGTGTGCGGTCCCTaGAGTCCAGCTGGCTGCGCT | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKSVCGP*SPAGCA Trigger: AGCGCAGCCAGCTGGACTTCAGGGACCGCACACTGA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTTCAGTGTGCGGTCCCTaGAGTCCAGCTGGCTGCGCT | + |
Preference number: 4 (lower is better) Translates to: QVGQMLTVKEYIHSYCICSVCGP*SPAGCA Trigger: AGCGCAGCCAGCTGGACTTCAGGGACCGCACACTGA...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACGTCAGCTGCTTGGTCTaGAGTTCAAACCCTTCGACC | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHVSCLV*SSNPST Trigger: GGTCGAAGGGTTTGAACTGCAGACCAAGCAGCTGAC...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAACCTCTCGGGTCAGCTaGTTGGTCTGCAGTTCAAAC | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKTSRVS*LVCSSN Trigger: GTTTGAACTGCAGACCAAGCAGCTGACCCGAGAGGT...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | ATAGGGCAGAAAGTATTTCAGCTGAACTCTGCTTTTCCTGGGAGGGTCCTAACAGGTTGGCTCCCTCCCTaGTCTGGTCCCTCATATTCT | + |
Preference number: 4 (lower is better) Translates to: IGQKVFQLNSAFPGRVLTGWLPP*SGPSYS Trigger: AGAATATGAGGGACCAGAGCAGGGAGGGAGCCAACC...TGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCTCGGGTCAGCTGCTTaGTCTGCAGTTCAAACCCTT | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNLGSAA*SAVQTL Trigger: AAGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAGACTGCTGGCGGAGCTaGTCCTCTGCAAGGGCTGTC | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKDCWRS*SSARAV Trigger: GACAGCCCTTGCAGAGGACCAGCTCCGCCAGCAGTC...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACGATACCTCAGAGATCTaGCTCTCCAGGGCTGCTACT | + |
Preference number: 4 (lower is better) Translates to: LCFSWEGPNSVLESAANYDTSEI*LSRAAT Trigger: AGTAGCAGCCCTGGAGAGCCAGATCTCTGAGGTATC...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAGCTGGTCTTTCTGCTTaGCTTTCTCGTAGGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKAGLSA*LSRRCP Trigger: TGGGCACCTACGAGAAAGCCAAGCAGAAAGACCAGC...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAACCTTCAGCTTCTGGATaGCCAGCTGGTCTTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKPSASG*PAGLSA Trigger: AGCAGAAAGACCAGCTGGCCATCCAGAAGCTGAAGG...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATCCAGTTCCTGCCGATaGAGCTGCTGCAGCCGGGCC | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKSSSCR*SCCSRA Trigger: GGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGA...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | TGGAAGCAAGGTTCCAAGTTTTGGGAGGAACTCACTAGTCCTCAGCCCTTGGGACATAAAGAAAGAAGGTaGGCTCGTTGGCTGCAGCAA | + |
Preference number: 4 (lower is better) Translates to: WKQGSKFWEELTSPQPLGHKERR*ARWLQQ Trigger: TTGCTGCAGCCAACGAGCCCACCTTCTTTCTTTATG...TCCCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATTTTTCGATGTGGCTCTaGAGGGCTCCAACCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNFSMWL*RAPTSS Trigger: AGAGGAGGTTGGAGCCCTCCAGAGCCACATCGAAAA...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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3UTR CAA 72 bp | TCCAAGTTTTGGGAGGAACTCACTAGTCCTCAGCCCTaGGGACAAACCGTCACTGTTTTTAACTCCCTGGTC | + |
Preference number: 4 (lower is better) Translates to: SKFWEELTSPQP*GQTVTVFNSLV Trigger: GACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | TGGGACAAACCGTCACTGTTTTTAACTCCCTGGTCTCTTCCTAGCTTGATGTATATACCGACAGTACCTTaGTGCTGGCCTCCAGGGCTT | + |
Preference number: 4 (lower is better) Translates to: WDKPSLFLTPWSLPSLMYIPTVP*CWPPGL Trigger: AAGCCCTGGAGGCCAGCATCAAGGTACTGTCGGTAT...ATACATCAAGCTAGGAAGAGACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTGGTGTTCTTGCTTTTaGGCACAACTTGGGCTCGCA | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHWCSCF*AQLGLA Trigger: TGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAACTTGTAAGACTGGCTaGGGTATCCAAGCTAGTGGC | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKTCKTG*GIQASG Trigger: GCCACTAGCTTGGATACCGCAGCCAGTCTTACAAGT...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACACCCCGCTCTTCCTCTaGCTTTTTATTGGCATCCTC | + |
Preference number: 4 (lower is better) Translates to: LCFSWEGPNSVLESAANYTPLFL*LFIGIL Trigger: GAGGATGCCAATAAAAAGGCAGAGGAAGAGCGGGGT...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATCTGCTATCTGCTCTTaGAGCACCTTCAAGTCTCCC | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKSAICS*STFKSP Trigger: GGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGGGCATATGCCCGCCCTaGCAAGGCTTCTCTGGTCTC | + |
Preference number: 4 (lower is better) Translates to: HTQFQPKKFVICQAVKALGICPP*QGFSGL Trigger: GAGACCAGAGAAGCCTTGGCAGGGCGGGCATATGCC...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTCTGATCAGCGGCATATaGCCGCCCTGCCAAGGCTTC | + |
Preference number: 4 (lower is better) Translates to: QVGQMLTVKEYIHSYCICLISGI*PPCQGF Trigger: GAAGCCTTGGCAGGGCGGGCATATGCCGCTGATCAG...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAACAGTCCTCAGCCTCCTaGTGGTGCTGGCTTTCCAGC | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKQSSAS*WCWLSS Trigger: GCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGACTG...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CTAGTCCTCAGCCCTTGGGACAAACCGTCACTGTTTTTAACTCCCTGGTCTCTTTCCAGCCTGTGTTTCTaGTTCCTCAGAGATGTGATC | + |
Preference number: 4 (lower is better) Translates to: LVLSPWDKPSLFLTPWSLSSLCF*FLRDVI Trigger: GATCACATCTCTGAGGAAGCAGAAACACAGGCTGGA...AAGAGACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCAAGGGCTGAGGACTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATGAGATCCTTCTTACTTaGGCCGCCCCCGAAATTCAT | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNEILLT*AAPEIH Trigger: ATGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTC...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACGAGATCCTTCTTACTTaGGCCGCCCCCGAAATTCAT | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHEILLT*AAPEIH Trigger: ATGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTC...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGACTTTGGGGGAAGTaGTCCACGGGCCGCTCTGTC | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKRLWGK*STGRSV Trigger: GACAGAGCGGCCCGTGGACCACTTCCCCCAAAGTCT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CCTGGAAGCAAGGTTCCAAGTTTTGGGAGGAACTCACTAGTCCTCAGCCCTTGGTCTTCTCATCTCGAATaGTTTGCAGCTCACCTTTCA | + |
Preference number: 4 (lower is better) Translates to: PGSKVPSFGRNSLVLSPWSSHLE*FAAHLS Trigger: TGAAAGGTGAGCTGCAAACCATTCGAGATGAGAAGA...CCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTCTGCAGCCGGGGGTCTaGTCGGTTCTTCTCATCTCG | + |
Preference number: 4 (lower is better) Translates to: QVGQMLTVKEYIHSYCICLQPGV*SVLLIS Trigger: CGAGATGAGAAGAACCGACCAGACCCCCGGCTGCAG...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATTGGGCCTGGAAATaGCTTTTAAGACGGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHNWAWK*LLRRAA Trigger: GGCTGCCCGTCTTAAAAGCCATTTCCAGGCCCAATT...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATTCTGGATGGCCAGCTaGTCTTTCTGCTTGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRFWMAS*SFCLAF Trigger: GAAAGCCAAGCAGAAAGACCAGCTGGCCATCCAGAA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATCCTCAGCCTCCTGCTaGTGCTGGCTTTCCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKSSASC*CWLSSS Trigger: GGAGCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTCCTCAGCCTCCTGCTaGTGCTGGCTTTCCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: HTQFQPKKFVICQAVKALSSASC*CWLSSS Trigger: GGAGCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCCTGTAGTAGCTTCTTaGGCTTCTCCATCTTGTCCT | + |
Preference number: 4 (lower is better) Translates to: NKNAREEAVEIRACPSHNPVVAS*ASPSCP Trigger: AGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTGCTTCCTCAGAGATGTaGTCTCCACCTCCTTGCGGG | + |
Preference number: 4 (lower is better) Translates to: QVGQMLTVKEYIHSYCICASSEM*SPPPCG Trigger: CCCGCAAGGAGGTGGAGATCACATCTCTGAGGAAGC...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATGGGCACGATCGTGCTaGTGTGTAATGAGGCGGGCT | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKWARSC*CVMRRA Trigger: AGCCCGCCTCATTACACAGCAGCACGATCGTGCCCA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR GCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATCATCTCGAATGGTTTaGAGCTCACCTTTCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKSSRMV*SSPFSS Trigger: GGAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR GCA 90 bp | CTAGTCCTCAGCCCTTGGGACAAACCGTCACTGTTTTTAACTCCCTGGTCTCTTTTCCTCATTTCTTGCTaGAATTGGGCCTGGAAATGG | + |
Preference number: 4 (lower is better) Translates to: LVLSPWDKPSLFLTPWSLFLISC*NWAWKW Trigger: CCATTTCCAGGCCCAATTGCAGCAAGAAATGAGGAA...AAGAGACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCAAGGGCTGAGGACTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTGGTCACTCTGCTCCTaGGCACGATCGTGCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: HTQFQPKKFVICQAVKALWSLCS*ARSCCC Trigger: ACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACCTGCCAAGGCTTCTCTaGTCTCTTCTAAGCGAAGTT | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHLPRLL*SLLSEV Trigger: AACTTCGCTTAGAAGAGACCAGAGAAGCCTTGGCAG...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAAGAAGGTGGGCTCGTTaGCTGCAGCAAGCTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKRRWAR*LQQAAG Trigger: CCCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACATATTCTTTTCGATGTaGCTCTGGAGGGCTCCAACC | + |
Preference number: 4 (lower is better) Translates to: LCFSWEGPNSVLESAANYIFFSM*LWRAPT Trigger: GGTTGGAGCCCTCCAGAGCCACATCGAAAAGAATAT...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | ATAACTTTCCAGGGTACCATGAATCCTGATTGTAGTGAAAAAGAAGCACTCATAGTGCTGTCCTCACTGTaGGTGGAGCACCGGTCATCC | + |
Preference number: 4 (lower is better) Translates to: ITFQGTMNPDCSEKEALIVLSSL*VEHRSS Trigger: GGATGACCGGTGCTCCACTCACAGTGAGGACAGCAC...TATGAGTGCTTCTTTTTCACTACAATCAGGATTCATGGTACCCTGGAAAGTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGATCCTGCAAGAGCTTCTaGAGCTCGCGCAGCATCAAG | + |
Preference number: 4 (lower is better) Translates to: LLLLQRHHFCSIEVCSRRSCKSF*SSRSIK Trigger: CTTGATGCTGCGCGAGCTTCAGAAGCTCTTGCAGGA...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
||
CDS-3UTR TCA 90 bp | CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTCTGGGTCAAGCTATCTaGGGAGGCTGTGTCGGCTGG | + |
Preference number: 4 (lower is better) Translates to: QLKSLRFNDHCYYYKDITLGQAI*GGCVGW Trigger: CCAGCCGACACAGCCTCCTCAGATAGCTTGACCCAG...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
||
CDS-3UTR GCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATGGTACTGGAGAAGCTaGTTTTTCTGTGTCTCGATG | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKWYWRS*FFCVSM Trigger: CATCGAGACACAGAAAAAGCAGCTTCTCCAGTACCA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTTCCTCATTTCTTGCTaGAATTGGGCCTGGAAATGG | + |
Preference number: 4 (lower is better) Translates to: INKNAREEAVEIRACPSHFLISC*NWAWKW Trigger: CCATTTCCAGGCCCAATTGCAGCAAGAAATGAGGAA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR GCA 90 bp | CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTTGGCTTTCTCGTAGGTaGCCAGCAGTTCAGATACCT | + |
Preference number: 4 (lower is better) Translates to: QQPQDIFSEGARQRNEGSWLSRR*PAVQIP Trigger: AGGTATCTGAACTGCTGGGCACCTACGAGAAAGCCA...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGATTCTCCAGGTCCAGCTaGAGAAGTCGCTCCTTCAGC | + |
Preference number: 4 (lower is better) Translates to: LLLLQRHHFCSIEVCSRRFSRSS*RSRSFS Trigger: GCTGAAGGAGCGACTTCTGCAGCTGGACCTGGAGAA...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
||
CDS-3UTR CCA 90 bp | AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATGGCCTCTTCAGACTTTaGGGGAAGTGGTCCACGGGC | + |
Preference number: 4 (lower is better) Translates to: RCIDTTIKKTQLKSLRFNGLFRL*GKWSTG Trigger: GCCCGTGGACCACTTCCCCCAAAGTCTGAAGAGGCC...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | TGGGACAAACCGTCACTGTTTTTAACTCCCTGGTCTCTTCCTAGCTTGATGTATAATTGGGCCTGGAAATaGCTTTTAAGACGGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: WDKPSLFLTPWSLPSLMYNWAWK*LLRRAA Trigger: GGCTGCCCGTCTTAAAAGCCATTTCCAGGCCCAATT...ATACATCAAGCTAGGAAGAGACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAATACCGACAGTACCTTaGTGCTGGCCTCCAGGGCTT | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKIPTVP*CWPPGL Trigger: AAGCCCTGGAGGCCAGCATCAAGGTACTGTCGGTAT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACAGAATCAGGAAACGTaGGACCTGGAGGCTGCACAC | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKQNQET*DLEAAH Trigger: GTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTG...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR TCA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATGTCCTTCAAGACATTaGTATCCAGACTGGATTCGT | + |
Preference number: 4 (lower is better) Translates to: KNAREEAVEIRACPSHNKCPSRH*YPDWIR Trigger: ACGAATCCAGTCTGGATATCAATGTCTTGAAGGACA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATAAGGCATGGTCACTCTaGTCCTGGGCACGATCGTGC | + |
Preference number: 4 (lower is better) Translates to: RCIDTTIKKTQLKSLRFNKAWSL*SWARSC Trigger: GCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTT...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGGTCAGCTGCTTGGTCTaGAGTTCAAACCCTTCGACC | + |
Preference number: 4 (lower is better) Translates to: HTQFQPKKFVICQAVKALVSCLV*SSNPST Trigger: GGTCGAAGGGTTTGAACTGCAGACCAAGCAGCTGAC...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATTTGGCTGCAGCAAGCTaGAGGGCCTGGGTCAAGCTA | + |
Preference number: 4 (lower is better) Translates to: RCIDTTIKKTQLKSLRFNLAAAS*RAWVKL Trigger: TAGCTTGACCCAGGCCCTGCAGCTTGCTGCAGCCAA...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGGTTGGCTCCCTCCCTaGTCTGGTCCCTCATATTCT | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKGWLPP*SGPSYS Trigger: AGAATATGAGGGACCAGAGCAGGGAGGGAGCCAACC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACCTACATCCGCCTCGTaGGATACCGACAGTACCTTG | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKPTSAS*DTDSTL Trigger: CAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGG...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGACTCGGGTCAGCTGCTTaGTCTGCAGTTCAAACCCTT | + |
Preference number: 4 (lower is better) Translates to: LLLLQRHHFCSIEVCSRRLGSAA*SAVQTL Trigger: AAGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAG...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATCTTCTCATCTCGAATaGTTTGCAGCTCACCTTTCA | + |
Preference number: 4 (lower is better) Translates to: NAREEAVEIRACPSHNKRSSHLE*FAAHLS Trigger: TGAAAGGTGAGCTGCAAACCATTCGAGATGAGAAGA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACGCTCCTTCAGCTTCTaGATGGCCAGCTGGTCTTTC | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKRSFSF*MASWSF Trigger: GAAAGACCAGCTGGCCATCCAGAAGCTGAAGGAGCG...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACATCCAGGGTCACCTaGCTTTTCCTAGCTGCAACC | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKTSRVT*LFLAAT Trigger: GGTTGCAGCTAGGAAAAGCCAGGTGACCCTGGATGT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACTTGTAAGACTGGCTaGGGTATCCAAGCTAGTGGC | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKTCKTG*GIQASG Trigger: GCCACTAGCTTGGATACCGCAGCCAGTCTTACAAGT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACCCCGCTCTTCCTCTaGCTTTTTATTGGCATCCTC | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKTPLFL*LFIGIL Trigger: GAGGATGCCAATAAAAAGGCAGAGGAAGAGCGGGGT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGATCTGCTATCTGCTCTTaGAGCACCTTCAAGTCTCCC | + |
Preference number: 4 (lower is better) Translates to: LLLLQRHHFCSIEVCSRRSAICS*STFKSP Trigger: GGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGA...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGCGGGCTTTGGTTTCTaGTATCTGCTCTTGCAGCAC | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKAGFGF*YLLLQH Trigger: GTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTGTCTTCCTCATTTCTTaGTGCAATTGGGCCTGGAAA | + |
Preference number: 4 (lower is better) Translates to: QQPQDIFSEGARQRNEGSVFLIS*CNWAWK Trigger: TTTCCAGGCCCAATTGCAGCAAGAAATGAGGAAGAC...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATGGCTTTCTCGTAGGTaGCCAGCAGTTCAGATACCT | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKWLSRR*PAVQIP Trigger: AGGTATCTGAACTGCTGGGCACCTACGAGAAAGCCA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGCCACAGAACGTAGTTaGTCCAGCTCCAAGTCCTTC | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKATERS*SSSKSF Trigger: GAAGGACTTGGAGCTGGAGCAACTACGTTCTGTGGC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGATACCTCAGAGATCTaGCTCTCCAGGGCTGCTACT | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKDTSEI*LSRAAT Trigger: AGTAGCAGCCCTGGAGAGCCAGATCTCTGAGGTATC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTCCTGTAGTAGCTTCTTaGGCTTCTCCATCTTGTCCT | + |
Preference number: 4 (lower is better) Translates to: QVGQMLTVKEYIHSYCICPVVAS*ASPSCP Trigger: AGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGG...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTGCCACAGAACGTAGTTaGTCCAGCTCCAAGTCCTTC | + |
Preference number: 4 (lower is better) Translates to: QLKSLRFNDHCYYYKDITATERS*SSSKSF Trigger: GAAGGACTTGGAGCTGGAGCAACTACGTTCTGTGGC...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATCCAGCCTGTGTTTCTaGTTCCTCAGAGATGTGATC | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKSSLCF*FLRDVI Trigger: GATCACATCTCTGAGGAAGCAGAAACACAGGCTGGA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGACTGCCAAGGCTTCTCTaGTCTCTTCTAAGCGAAGTT | + |
Preference number: 4 (lower is better) Translates to: LLLLQRHHFCSIEVCSRRLPRLL*SLLSEV Trigger: AACTTCGCTTAGAAGAGACCAGAGAAGCCTTGGCAG...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTTGCTGCAATTGGGCCTaGAAATGGCTTTTAAGACGG | + |
Preference number: 4 (lower is better) Translates to: QVGQMLTVKEYIHSYCICCCNWA*KWLLRR Trigger: CCGTCTTAAAAGCCATTTCCAGGCCCAATTGCAGCA...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTTTTTCGATGTGGCTCTaGAGGGCTCCAACCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: QLKSLRFNDHCYYYKDITFSMWL*RAPTSS Trigger: AGAGGAGGTTGGAGCCCTCCAGAGCCACATCGAAAA...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR TCA 90 bp | AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATTGGTGTTCTTGCTTTTaGGCACAACTTGGGCTCGCA | + |
Preference number: 4 (lower is better) Translates to: RCIDTTIKKTQLKSLRFNWCSCF*AQLGLA Trigger: TGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCA...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATGGTACTGGAGAAGCTaGTTTTTCTGTGTCTCGATG | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKWYWRS*FFCVSM Trigger: CATCGAGACACAGAAAAAGCAGCTTCTCCAGTACCA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATTGGTTTCTGCTATCTaGTCTTGCAGCACCTTCAAG | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKLVSAI*SCSTFK Trigger: CTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAGTCTTCCTCATTTCTTaGTGCAATTGGGCCTGGAAA | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKVFLIS*CNWAWK Trigger: TTTCCAGGCCCAATTGCAGCAAGAAATGAGGAAGAC...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGAAGTCTTGCCTGGTACTaGAGAAGCTGCTTTTTCTGT | + |
Preference number: 4 (lower is better) Translates to: LLLLQRHHFCSIEVCSRRSLAWY*RSCFFC Trigger: ACAGAAAAAGCAGCTTCTCCAGTACCAGGCAAGACT...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATCCTTGAGTCTTGCCTaGTACTGGAGAAGCTGCTTT | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKSLSLA*YWRSCF Trigger: AAAGCAGCTTCTCCAGTACCAGGCAAGACTCAAGGA...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAACCTCTGCCTTTTTATTaGCATCCTCTAAGTCCTGCT | + |
Preference number: 4 (lower is better) Translates to: PSHNKRGTEISGVGKKTKPLPFY*HPLSPA Trigger: AGCAGGACTTAGAGGATGCCAATAAAAAGGCAGAGG...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATGCTGCAATTGGGCCTaGAAATGGCTTTTAAGACGG | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKCCNWA*KWLLRR Trigger: CCGTCTTAAAAGCCATTTCCAGGCCCAATTGCAGCA...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCATTTCTTGCTGCAATTaGGCCTGGAAATGGCTTTTA | + |
Preference number: 4 (lower is better) Translates to: CHLFYKLHVEGKTMKSSLISCCN*AWKWLL Trigger: TAAAAGCCATTTCCAGGCCCAATTGCAGCAAGAAAT...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACATAAAGAAAGAAGGTaGGCTCGTTGGCTGCAGCAA | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKHKERR*ARWLQQ Trigger: TTGCTGCAGCCAACGAGCCCACCTTCTTTCTTTATG...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAATATTCTTTTCGATGTaGCTCTGGAGGGCTCCAACC | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKIFFSM*LWRAPT Trigger: GGTTGGAGCCCTCCAGAGCCACATCGAAAAGAATAT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAAGTCTTGCCTGGTACTaGAGAAGCTGCTTTTTCTGT | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKSLAWY*RSCFFC Trigger: ACAGAAAAAGCAGCTTCTCCAGTACCAGGCAAGACT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGCATCCTCTAAGTCCTaGTTCATCTTCTTCTTATCC | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKASSKS*FIFFLS Trigger: GGATAAGAAGAAGATGAAGCAGGACTTAGAGGATGC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR GCA 90 bp | CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTTTGGTTTCTGCTATCTaGTCTTGCAGCACCTTCAAG | + |
Preference number: 4 (lower is better) Translates to: QLKSLRFNDHCYYYKDITLVSAI*SCSTFK Trigger: CTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAA...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CCA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAATTTCTTGCTGCAATTaGGCCTGGAAATGGCTTTTA | + |
Preference number: 4 (lower is better) Translates to: LPTIKEARRFQELVRKQKISCCN*AWKWLL Trigger: TAAAAGCCATTTCCAGGCCCAATTGCAGCAAGAAAT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS TCA 90 bp | GGGCTCGTTGGCTGCAGCAAGCTGCAGGGCCTGGGTCAAGCTATCTaGGGAGGCTGTGTCGGCTGGGTCCCCAAGACCTCCACCACCCAC | + |
Preference number: 5 (lower is better) Translates to: GLVGCSKLQGLGQAI*GGCVGWVPKTSTTH Trigger: GTGGGTGGTGGAGGTCTTGGGGACCCAGCCGACACAGCCTCCTCAGATAGCTTGACCCAGGCCCTGCAGCTTGCTGCAGCCAACGAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | AGCTGCTGCAGCCGGGCCAGTTCCTGCTTCCAGTCCTCAGCCTCCTaGTGGTGCTGGCTTTCCAGCTCCTCACAGGACAGCCGCAGGGAG | + |
Preference number: 5 (lower is better) Translates to: SCCSRASSCFQSSAS*WCWLSSSSQDSRRE Trigger: CTCCCTGCGGCTGTCCTGTGAGGAGCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | CTGAAGTCCAGCTGGCTGCGCTCCAGTTCCTGCCGATGGAGCTGCTaGAGCCGGGCCAGTTCCTGCTTCCAGTCCTCAGCCTCCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: LKSSWLRSSSCRWSC*SRASSCFQSSASCW Trigger: CCAGCAGGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGAGCGCAGCCAGCTGGACTTCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | TCCCTGAAGTCCAGCTGGCTGCGCTCCAGTTCCTGCCGATGGAGCTaGTGCAGCCGGGCCAGTTCCTGCTTCCAGTCCTCAGCCTCCTGC | + |
Preference number: 5 (lower is better) Translates to: SLKSSWLRSSSCRWS*CSRASSCFQSSASC Trigger: GCAGGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGAGCGCAGCCAGCTGGACTTCAGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | AGCTCCAAGTCCTTCTCCGCGAGCACAGCCAGGGCCCGGTCCCGCTaGTTGTGTAGCTCCTCCTCCAGTTTCAGTGTGCGGTCCCTGAAG | + |
Preference number: 5 (lower is better) Translates to: SSKSFSASTARARSR*LCSSSSSFSVRSLK Trigger: CTTCAGGGACCGCACACTGAAACTGGAGGAGGAGCTACACAAGCAGCGGGACCGGGCCCTGGCTGTGCTCGCGGAGAAGGACTTGGAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | CTTCTGCGTCCTGGCAACCCAGAGGACAAGGCCACAGAACGTAGTTaGTCCAGCTCCAAGTCCTTCTCCGCGAGCACAGCCAGGGCCCGG | + |
Preference number: 5 (lower is better) Translates to: LLRPGNPEDKATERS*SSSKSFSASTARAR Trigger: CCGGGCCCTGGCTGTGCTCGCGGAGAAGGACTTGGAGCTGGAGCAACTACGTTCTGTGGCCTTGTCCTCTGGGTTGCCAGGACGCAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CTCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTAAGACGGGCAGCCTCTaGCTGAAGCTCCTGCAGCCG | + |
Preference number: 5 (lower is better) Translates to: LTWLLGTLSGMGTKGSAGKTGSL*LKLLQP Trigger: CGGCTGCAGGAGCTTCAGCAAGAGGCTGCCCGTCTT...ACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS TCA 90 bp | AGTTCCAGGTCCTGGCGCTGGGTCCTCTCCTCCTGCAAGAGCTTCTaGAGCTCGCGCAGCATCAAGGCATGGTCACTCTGCTCCTGGGCA | + |
Preference number: 5 (lower is better) Translates to: SSRSWRWVLSSCKSF*SSRSIKAWSLCSWA Trigger: TGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCGCGAGCTTCAGAAGCTCTTGCAGGAGGAGAGGACCCAGCGCCAGGACCTGGAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS-3UTR CAA 90 bp | ACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCCTGCTTCAGCTCCTGTaGGTAGTAGAGCGCGGTAGC | + |
Preference number: 5 (lower is better) Translates to: TWLLGTLSGMGTKGSAGSLLQLL*VVERGS Trigger: GCTACCGCGCTCTACTACCAACAGGAGCTGAAGCAG...GGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS GCA 90 bp | CGGCTAGAGGCTGCGAGGGCCAGTGTCTTGTTCTCCAGGTCCAGCTaGAGAAGTCGCTCCTTCAGCTTCTGGATGGCCAGCTGGTCTTTC | + |
Preference number: 5 (lower is better) Translates to: RLEAARASVLFSRSS*RSRSFSFWMASWSF Trigger: GAAAGACCAGCTGGCCATCCAGAAGCTGAAGGAGCGACTTCTGCAGCTGGACCTGGAGAACAAGACACTGGCCCTCGCAGCCTCTAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | ACTGGATTCGTCGCCATGGATGTCAAGGGAGGACCGGCTAGAGGCTaGGAGGGCCAGTGTCTTGTTCTCCAGGTCCAGCTGCAGAAGTCG | + |
Preference number: 5 (lower is better) Translates to: TGFVAMDVKGGPARG*EGQCLVLQVQLQKS Trigger: CGACTTCTGCAGCTGGACCTGGAGAACAAGACACTGGCCCTCGCAGCCTCTAGCCGGTCCTCCCTTGACATCCATGGCGACGAATCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | CCGCTTGGGAGCCGCATTAGCACTTGTTTCTCTTCAGGACTGAAGTaGAAGATCGTGAGGATGGCGGTGAGCGTCTGCTGGCGGCCCAGG | + |
Preference number: 5 (lower is better) Translates to: PLGSRISTCFSSGLK*KIVRMAVSVCWRPR Trigger: CCTGGGCCGCCAGCAGACGCTCACCGCCATCCTCACGATCTTGCACTTCAGTCCTGAAGAGAAACAAGTGCTAATGCGGCTCCCAAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 90 bp | GTGAGACCTGGAGGCTGCACACCTGAGAGGCCTACATCCGCCTCGTaGGATACCGACAGTACCTTGATGCTGGCCTCCAGGGCTTCTTTC | + |
Preference number: 5 (lower is better) Translates to: VRPGGCTPERPTSAS*DTDSTLMLASRASF Trigger: GAAAGAAGCCCTGGAGGCCAGCATCAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 90 bp | CTTCGACCTGATCAGCGGCATATGCCCGCCCTGCCAAGGCTTCTCTaGTCTCTTCTAAGCGAAGTTCCAGGTCCTGGCGCTGGGTCCTCT | + |
Preference number: 5 (lower is better) Translates to: LRPDQRHMPALPRLL*SLLSEVPGPGAGSS Trigger: AGAGGACCCAGCGCCAGGACCTGGAACTTCGCTTAGAAGAGACCAGAGAAGCCTTGGCAGGGCGGGCATATGCCGCTGATCAGGTCGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS-3UTR CAA 90 bp | CTCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCTCGGGTCAGCTGCTaGGTCTGCAGTTCAAACCCT | + |
Preference number: 5 (lower is better) Translates to: LTWLLGTLSGMGTKGSAGSRVSC*VCSSNP Trigger: AGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAGA...ACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS TCA 90 bp | CCTCACTGTGAGTGGAGCACCGGTCATCCACAGAATCAGGAAACGTaGGACCTGGAGGCTGCACACCTGAGAGGCCTACATCCGCCTCGT | + |
Preference number: 5 (lower is better) Translates to: PHCEWSTGHPQNQET*DLEAAHLRGLHPPR Trigger: ACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTGTGGATGACCGGTGCTCCACTCACAGTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS TCA 90 bp | ACCTCTCGGGTCAGCTGCTTGGTCTGCAGTTCAAACCCTTCGACCTaGTCAGCGGCATATGCCCGCCCTGCCAAGGCTTCTCTGGTCTCT | + |
Preference number: 5 (lower is better) Translates to: TSRVSCLVCSSNPST*SAAYARPAKASLVS Trigger: AGAGACCAGAGAAGCCTTGGCAGGGCGGGCATATGCCGCTGATCAGGTCGAAGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS TCA 90 bp | TCAGAGATCTGGCTCTCCAGGGCTGCTACTCTCTGCTCTTCTACCTaGGACTGCTGGCGGAGCTGGTCCTCTGCAAGGGCTGTCTTCCTC | + |
Preference number: 5 (lower is better) Translates to: SEIWLSRAATLCSST*DCWRSWSSARAVFL Trigger: GAGGAAGACAGCCCTTGCAGAGGACCAGCTCCGCCAGCAGTCTCAGGTAGAAGAGCAGAGAGTAGCAGCCCTGGAGAGCCAGATCTCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | GAGCACCGGTCATCCACAGAATCAGGAAACGTGAGACCTGGAGGCTaGACACCTGAGAGGCCTACATCCGCCTCGTGGGATACCGACAGT | + |
Preference number: 5 (lower is better) Translates to: EHRSSTESGNVRPGG*TPERPTSASWDTDS Trigger: ACTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTGTGGATGACCGGTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | GGTGCCCAGCAGTTCAGATACCTCAGAGATCTGGCTCTCCAGGGCTaGTACTCTCTGCTCTTCTACCTGAGACTGCTGGCGGAGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: GAQQFRYLRDLALQG*YSLLFYLRLLAELV Trigger: GACCAGCTCCGCCAGCAGTCTCAGGTAGAAGAGCAGAGAGTAGCAGCCCTGGAGAGCCAGATCTCTGAGGTATCTGAACTGCTGGGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | ACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCAGAGATCCTTCTTACTaGGGCCGCCCCCGAAATTCA | + |
Preference number: 5 (lower is better) Translates to: TWLLGTLSGMGTKGSAGSRDPSY*GRPRNS Trigger: TGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTCT...GGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCGCAGGGAGATATACTaGTCCTTCAGCTCTGCGAGC | + |
Preference number: 5 (lower is better) Translates to: SHGCSGPSLGWAQRAQLVRREIY*SFSSAS Trigger: GCTCGCAGAGCTGAAGGACAAGTATATCTCCCTGCG...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS GCA 90 bp | CGATCGTGCTGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTaGTCTTGCAGCACCTTCAAGTCTCCCTCCAGGCGACCCCGCTCT | + |
Preference number: 5 (lower is better) Translates to: RSCCCVMRRALVSAI*SCSTFKSPSRRPRS Trigger: AGAGCGGGGTCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS GCA 90 bp | CTGGGCACGATCGTGCTGCTGTGTAATGAGGCGGGCTTTGGTTTCTaGTATCTGCTCTTGCAGCACCTTCAAGTCTCCCTCCAGGCGACC | + |
Preference number: 5 (lower is better) Translates to: LGTIVLLCNEAGFGF*YLLLQHLQVSLQAT Trigger: GGTCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS CCA 90 bp | TCTCCACCTCCTTGCGGGCCAACTGCTCAGCATAAAGAAAGAAGGTaGGCTCGTTGGCTGCAGCAAGCTGCAGGGCCTGGGTCAAGCTAT | + |
Preference number: 5 (lower is better) Translates to: SPPPCGPTAQHKERR*ARWLQQAAGPGSSY Trigger: ATAGCTTGACCCAGGCCCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCTTTCTTTATGCTGAGCAGTTGGCCCGCAAGGAGGTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | ACCATTTCCCTAACTCGCACCTCCTACCCCCAGCCTTTCTCCCTAACCTGCTCCTCAGCAGCCTCGGAGTaGGCCATTATCTCAGGGTCG | + |
Preference number: 5 (lower is better) Translates to: TISLTRTSYPQPFSLTCSSAASE*AIISGS Trigger: CGACCCTGAGATAATGGCCAACTCCGAGGCTGCTGA...GGAGCAGGTTAGGGAGAAAGGCTGGGGGTAGGAGGTGCGAGTTAGGGAAATGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS TCA 90 bp | GCTGCGGTATCCAAGCTAGTGGCAGTTCCGGTGCTGTCCTCACTGTaGGTGGAGCACCGGTCATCCACAGAATCAGGAAACGTGAGACCT | + |
Preference number: 5 (lower is better) Translates to: AAVSKLVAVPVLSSL*VEHRSSTESGNVRP Trigger: AGGTCTCACGTTTCCTGATTCTGTGGATGACCGGTGCTCCACTCACAGTGAGGACAGCACCGGAACTGCCACTAGCTTGGATACCGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | TGCTGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTGCTCTTaGAGCACCTTCAAGTCTCCCTCCAGGCGACCCCGCTCTTCCTCT | + |
Preference number: 5 (lower is better) Translates to: CCCVMRRALVSAICS*STFKSPSRRPRSSS Trigger: AGAGGAAGAGCGGGGTCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS GCA 90 bp | CGCAGCATCAAGGCATGGTCACTCTGCTCCTGGGCACGATCGTGCTaGTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTGCTCTTGC | + |
Preference number: 5 (lower is better) Translates to: RSIKAWSLCSWARSC*CVMRRALVSAICSC Trigger: GCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS GCA 90 bp | TCGCGCAGCATCAAGGCATGGTCACTCTGCTCCTGGGCACGATCGTaGTGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: SRSIKAWSLCSWARS*CCVMRRALVSAICS Trigger: AGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS TCA 90 bp | CACCTGAGAGGCCTACATCCGCCTCGTGGGATACCGACAGTACCTTaGTGCTGGCCTCCAGGGCTTCTTTCTCCTTCAGCAGGCTTTTAT | + |
Preference number: 5 (lower is better) Translates to: HLRGLHPPRGIPTVP*CWPPGLLSPSAGFY Trigger: ATAAAAGCCTGCTGAAGGAGAAAGAAGCCCTGGAGGCCAGCATCAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS TCA 90 bp | GTCATCCACAGAATCAGGAAACGTGAGACCTGGAGGCTGCACACCTaGGAGGCCTACATCCGCCTCGTGGGATACCGACAGTACCTTGAT | + |
Preference number: 5 (lower is better) Translates to: VIHRIRKRETWRLHT*EAYIRLVGYRQYLD Trigger: ATCAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTGTGGATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS CCA 90 bp | TTTAAGACGGGCAGCCTCTTGCTGAAGCTCCTGCAGCCGGGGGTCTaGTCGGTTCTTCTCATCTCGAATGGTTTGCAGCTCACCTTTCAG | + |
Preference number: 5 (lower is better) Translates to: FKTGSLLLKLLQPGV*SVLLISNGLQLTFQ Trigger: CTGAAAGGTGAGCTGCAAACCATTCGAGATGAGAAGAACCGACCAGACCCCCGGCTGCAGGAGCTTCAGCAAGAGGCTGCCCGTCTTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS-3UTR CAA 90 bp | ACCATTTCCCTAACTCGCACCTCCTACCCCCAGCCTTTCTCCCTAACCTGCTCCCCCAGGCTCCCATCTTaGGTGTTCTTGCTTTTGAGC | + |
Preference number: 5 (lower is better) Translates to: TISLTRTSYPQPFSLTCSPRLPS*VFLLLS Trigger: GCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGG...GGAGCAGGTTAGGGAGAAAGGCTGGGGGTAGGAGGTGCGAGTTAGGGAAATGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAGCCCGGTCCCGCTGCTaGTGTAGCTCCTCCTCCAGT | + |
Preference number: 5 (lower is better) Translates to: KNAREEAVEIRACPSHNKARSRC*CSSSSS Trigger: ACTGGAGGAGGAGCTACACAAGCAGCGGGACCGGGC...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 90 bp | ATCTTGTCCTTCAAGACATTGATATCCAGACTGGATTCGTCGCCATaGATGTCAAGGGAGGACCGGCTAGAGGCTGCGAGGGCCAGTGTC | + |
Preference number: 5 (lower is better) Translates to: ILSFKTLISRLDSSP*MSREDRLEAARASV Trigger: GACACTGGCCCTCGCAGCCTCTAGCCGGTCCTCCCTTGACATCCATGGCGACGAATCCAGTCTGGATATCAATGTCTTGAAGGACAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAAGACGGGCAGCCTCTaGCTGAAGCTCCTGCAGCCG | + |
Preference number: 5 (lower is better) Translates to: KNAREEAVEIRACPSHNKKTGSL*LKLLQP Trigger: CGGCTGCAGGAGCTTCAGCAAGAGGCTGCCCGTCTT...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | ACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCTTGTCCTTCAAGACATaGATATCCAGACTGGATTCG | + |
Preference number: 5 (lower is better) Translates to: TWLLGTLSGMGTKGSAGSLSFKT*ISRLDS Trigger: CGAATCCAGTCTGGATATCAATGTCTTGAAGGACAA...GGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS CCA 90 bp | GAAGTCGCTCCTTCAGCTTCTGGATGGCCAGCTGGTCTTTCTGCTTaGCTTTCTCGTAGGTGCCCAGCAGTTCAGATACCTCAGAGATCT | + |
Preference number: 5 (lower is better) Translates to: EVAPSASGWPAGLSA*LSRRCPAVQIPQRS Trigger: AGATCTCTGAGGTATCTGAACTGCTGGGCACCTACGAGAAAGCCAAGCAGAAAGACCAGCTGGCCATCCAGAAGCTGAAGGAGCGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 90 bp | GCCATTATCTCAGGGTCGCAGAGCTTCTCCACATCCAGGGTCACCTaGCTTTTCCTAGCTGCAACCTGTAGTAGCTTCTTGAGCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: AIISGSQSFSTSRVT*LFLAATCSSFLSFS Trigger: GGAGAAGCTCAAGAAGCTACTACAGGTTGCAGCTAGGAAAAGCCAGGTGACCCTGGATGTGGAGAAGCTCTGCGACCCTGAGATAATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATGGCCTCTTCAGACTTaGGGGGAAGTGGTCCACGGG | + |
Preference number: 5 (lower is better) Translates to: KNAREEAVEIRACPSHNKWPLQT*GEVVHG Trigger: CCCGTGGACCACTTCCCCCAAAGTCTGAAGAGGCCA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAGAAGGTGGGCTCGTaGGCTGCAGCAAGCTGCAGG | + |
Preference number: 5 (lower is better) Translates to: NKNAREEAVEIRACPSHNKKVGS*AAASCR Trigger: CCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCTT...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 90 bp | GTCATCTTCAACCCCAAATTCACCCTTGACACTTGTAAGACTGGCTaGGGTATCCAAGCTAGTGGCAGTTCCGGTGCTGTCCTCACTGTG | + |
Preference number: 5 (lower is better) Translates to: VIFNPKFTLDTCKTG*GIQASGSSGAVLTV Trigger: CACAGTGAGGACAGCACCGGAACTGCCACTAGCTTGGATACCGCAGCCAGTCTTACAAGTGTCAAGGGTGAATTTGGGGTTGAAGATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATGCACGCACCACATCCTaGAGTCTTGCCTGGTACTGG | + |
Preference number: 5 (lower is better) Translates to: NKNAREEAVEIRACPSHNARTTS*SLAWYW Trigger: CCAGTACCAGGCAAGACTCAAGGATGTGGTGCGTGC...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATGATACCGACAGTACCTaGATGCTGGCCTCCAGGGCT | + |
Preference number: 5 (lower is better) Translates to: NKNAREEAVEIRACPSHNDTDST*MLASRA Trigger: AGCCCTGGAGGCCAGCATCAAGGTACTGTCGGTATC...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | ACCATTTCCCTAACTCGCACCTCCTACCCCCAGCCTTTCTCCCTAACCTGCTCCCATTTCTTGCTGCAATaGGGCCTGGAAATGGCTTTT | + |
Preference number: 5 (lower is better) Translates to: TISLTRTSYPQPFSLTCSHFLLQ*GLEMAF Trigger: AAAAGCCATTTCCAGGCCCAATTGCAGCAAGAAATG...GGAGCAGGTTAGGGAGAAAGGCTGGGGGTAGGAGGTGCGAGTTAGGGAAATGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATCAGCAGCCTCGGAGTaGGCCATTATCTCAGGGTCG | + |
Preference number: 5 (lower is better) Translates to: NAREEAVEIRACPSHNKRSAASE*AIISGS Trigger: CGACCCTGAGATAATGGCCAACTCCGAGGCTGCTGA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAACGCAGGGAGATATACTaGTCCTTCAGCTCTGCGAGC | + |
Preference number: 5 (lower is better) Translates to: KNAREEAVEIRACPSHNKRREIY*SFSSAS Trigger: GCTCGCAGAGCTGAAGGACAAGTATATCTCCCTGCG...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 90 bp | TTCCCCAGGCTCCCATCTTTGGTGTTCTTGCTTTTGAGCACAACTTaGGCTCGCATCTTATACCGCTCAAACTCTTCCTTCAGCTGCTTC | + |
Preference number: 5 (lower is better) Translates to: FPRLPSLVFLLLSTT*ARILYRSNSSFSCF Trigger: GAAGCAGCTGAAGGAAGAGTTTGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCCCAGGCTCCCATCTTaGGTGTTCTTGCTTTTGAGC | + |
Preference number: 5 (lower is better) Translates to: NKNAREEAVEIRACPSHNPRLPS*VFLLLS Trigger: GCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTGGCCTCTTCAGACTTaGGGGGAAGTGGTCCACGGG | + |
Preference number: 5 (lower is better) Translates to: HTQFQPKKFVICQAVKALWPLQT*GEVVHG Trigger: CCCGTGGACCACTTCCCCCAAAGTCTGAAGAGGCCA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATGTAATGAGGCGGGCTTaGGTTTCTGCTATCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: NKNAREEAVEIRACPSHNVMRRA*VSAICS Trigger: AGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTAC...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATGCCCGGTCCCGCTGCTaGTGTAGCTCCTCCTCCAGT | + |
Preference number: 5 (lower is better) Translates to: RCIDTTIKKTQLKSLRFNARSRC*CSSSSS Trigger: ACTGGAGGAGGAGCTACACAAGCAGCGGGACCGGGC...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAAGAAGGTGGGCTCGTaGGCTGCAGCAAGCTGCAGG | + |
Preference number: 5 (lower is better) Translates to: PSHNKRGTEISGVGKKTKKKVGS*AAASCR Trigger: CCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCTT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACACCCCAAATTCACCCTaGACACTTGTAAGACTGGCT | + |
Preference number: 5 (lower is better) Translates to: INKNAREEAVEIRACPSHTPNSP*TLVRLA Trigger: AGCCAGTCTTACAAGTGTCAAGGGTGAATTTGGGGT...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATCCTCTGCCTTTTTATaGGCATCCTCTAAGTCCTGC | + |
Preference number: 5 (lower is better) Translates to: NAREEAVEIRACPSHNKRSSAFL*ASSKSC Trigger: GCAGGACTTAGAGGATGCCAATAAAAAGGCAGAGGA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACTCCTCTGCCTTTTTATaGGCATCCTCTAAGTCCTGC | + |
Preference number: 5 (lower is better) Translates to: LCFSWEGPNSVLESAANYSSAFL*ASSKSC Trigger: GCAGGACTTAGAGGATGCCAATAAAAAGGCAGAGGA...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACACCTGTAGTAGCTTCTaGAGCTTCTCCATCTTGTCC | + |
Preference number: 5 (lower is better) Translates to: INKNAREEAVEIRACPSHTCSSF*SFSILS Trigger: GGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGT...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAACTGCTTCAGCTCCTGTaGGTAGTAGAGCGCGGTAGC | + |
Preference number: 5 (lower is better) Translates to: PSHNKRGTEISGVGKKTKLLQLL*VVERGS Trigger: GCTACCGCGCTCTACTACCAACAGGAGCTGAAGCAG...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGCACGCACCACATCCTaGAGTCTTGCCTGGTACTGG | + |
Preference number: 5 (lower is better) Translates to: LPTIKEARRFQELVRKQKARTTS*SLAWYW Trigger: CCAGTACCAGGCAAGACTCAAGGATGTGGTGCGTGC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCCTCATCTCGAATGGTTaGCAGCTCACCTTTCAGCTC | + |
Preference number: 5 (lower is better) Translates to: CHLFYKLHVEGKTMKSSLLISNG*QLTFQL Trigger: GAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGAG...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCATTTCTTGCTGCAATaGGGCCTGGAAATGGCTTTT | + |
Preference number: 5 (lower is better) Translates to: NKNAREEAVEIRACPSHNHFLLQ*GLEMAF Trigger: AAAAGCCATTTCCAGGCCCAATTGCAGCAAGAAATG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCCATCTTTGGTGTTCTaGCTTTTGAGCACAACTTGG | + |
Preference number: 5 (lower is better) Translates to: NKNAREEAVEIRACPSHNPSLVF*LLSTTW Trigger: CCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGACCATCTTTGGTGTTCTaGCTTTTGAGCACAACTTGG | + |
Preference number: 5 (lower is better) Translates to: NAREEAVEIRACPSHNKRPSLVF*LLSTTW Trigger: CCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGG...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGAGATCCTTCTTACTaGGGCCGCCCCCGAAATTCA | + |
Preference number: 5 (lower is better) Translates to: PSHNKRGTEISGVGKKTKRDPSY*GRPRNS Trigger: TGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTCT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATCTCGGGTCAGCTGCTaGGTCTGCAGTTCAAACCCT | + |
Preference number: 5 (lower is better) Translates to: LPTIKEARRFQELVRKQKSRVSC*VCSSNP Trigger: AGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAGA...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTTGTCCTTCAAGACATaGATATCCAGACTGGATTCG | + |
Preference number: 5 (lower is better) Translates to: INKNAREEAVEIRACPSHLSFKT*ISRLDS Trigger: CGAATCCAGTCTGGATATCAATGTCTTGAAGGACAA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATTCTGCTATCTGCTCTaGCAGCACCTTCAAGTCTCC | + |
Preference number: 5 (lower is better) Translates to: PSHNKRGTEISGVGKKTKFCYLL*QHLQVS Trigger: GGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTTCTGCTATCTGCTCTaGCAGCACCTTCAAGTCTCC | + |
Preference number: 5 (lower is better) Translates to: HTQFQPKKFVICQAVKALFCYLL*QHLQVS Trigger: GGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAACTCATCTCGAATGGTTaGCAGCTCACCTTTCAGCTC | + |
Preference number: 5 (lower is better) Translates to: PSHNKRGTEISGVGKKTKLISNG*QLTFQL Trigger: GAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGAG...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTTGAGCTTCTCCATCTaGTCCTTCAAGACATTGATA | + |
Preference number: 5 (lower is better) Translates to: INKNAREEAVEIRACPSHLSFSI*SFKTLI Trigger: TATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTGTCTTCCTCATTTCTaGCTGCAATTGGGCCTGGAA | + |
Preference number: 5 (lower is better) Translates to: HTQFQPKKFVICQAVKALCLPHF*LQLGLE Trigger: TTCCAGGCCCAATTGCAGCAAGAAATGAGGAAGACA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGACCTGTAGTAGCTTCTaGAGCTTCTCCATCTTGTCC | + |
Preference number: 5 (lower is better) Translates to: HTQFQPKKFVICQAVKALTCSSF*SFSILS Trigger: GGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGT...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAACCCCAAATTCACCCTaGACACTTGTAAGACTGGCT | + |
Preference number: 5 (lower is better) Translates to: LPTIKEARRFQELVRKQKTPNSP*TLVRLA Trigger: AGCCAGTCTTACAAGTGTCAAGGGTGAATTTGGGGT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS-3UTR CAA 90 bp | AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATGTAATGAGGCGGGCTTaGGTTTCTGCTATCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: RCIDTTIKKTQLKSLRFNVMRRA*VSAICS Trigger: AGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTAC...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
||
CDS-3UTR CAA 90 bp | CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATGTCTTCCTCATTTCTaGCTGCAATTGGGCCTGGAA | + |
Preference number: 5 (lower is better) Translates to: LPTIKEARRFQELVRKQKCLPHF*LQLGLE Trigger: TTCCAGGCCCAATTGCAGCAAGAAATGAGGAAGACA...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
||
CDS-3UTR CAA 90 bp | TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCTTGAGCTTCTCCATCTaGTCCTTCAAGACATTGATA | + |
Preference number: 5 (lower is better) Translates to: CHLFYKLHVEGKTMKSSLLSFSI*SFKTLI Trigger: TATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAA...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090511.4 |
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CDS GCA 72 bp | AGCTGGCTGCGCTCCAGTTCCTGCCGATGGAGCTGCTaGAGCCGGGCCAGTTCCTGCTTCCAGTCCTCAGCC | + |
Preference number: 6 (lower is better) Translates to: SWLRSSSCRWSC*SRASSCFQSSA Trigger: GGCTGAGGACTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGAGCGCAGCCAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 72 bp | AAGTGCAAGATCGTGAGGATGGCGGTGAGCGTCTGCTaGCGGCCCAGGCTGTCGGGCAGGGTCAGGAAGCGG | + |
Preference number: 6 (lower is better) Translates to: KCKIVRMAVSVC*RPRLSGRVRKR Trigger: CCGCTTCCTGACCCTGCCCGACAGCCTGGGCCGCCAGCAGACGCTCACCGCCATCCTCACGATCTTGCACTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | TCCAGCTGGCTGCGCTCCAGTTCCTGCCGATGGAGCTaGTGCAGCCGGGCCAGTTCCTGCTTCCAGTCCTCA | + |
Preference number: 6 (lower is better) Translates to: SSWLRSSSCRWS*CSRASSCFQSS Trigger: TGAGGACTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGAGCGCAGCCAGCTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | TCCTTCTCCGCGAGCACAGCCAGGGCCCGGTCCCGCTaGTTGTGTAGCTCCTCCTCCAGTTTCAGTGTGCGG | + |
Preference number: 6 (lower is better) Translates to: SFSASTARARSR*LCSSSSSFSVR Trigger: CCGCACACTGAAACTGGAGGAGGAGCTACACAAGCAGCGGGACCGGGCCCTGGCTGTGCTCGCGGAGAAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | CTGAAGTGCAAGATCGTGAGGATGGCGGTGAGCGTCTaGTGGCGGCCCAGGCTGTCGGGCAGGGTCAGGAAG | + |
Preference number: 6 (lower is better) Translates to: LKCKIVRMAVSV*WRPRLSGRVRK Trigger: CTTCCTGACCCTGCCCGACAGCCTGGGCCGCCAGCAGACGCTCACCGCCATCCTCACGATCTTGCACTTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 72 bp | CTGAAGTCCAGCTGGCTGCGCTCCAGTTCCTGCCGATaGAGCTGCTGCAGCCGGGCCAGTTCCTGCTTCCAG | + |
Preference number: 6 (lower is better) Translates to: LKSSWLRSSSCR*SCCSRASSCFQ Trigger: CTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGAGCGCAGCCAGCTGGACTTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | GCCAGTTCCTGCTTCCAGTCCTCAGCCTCCTGCTGGTaGTGGCTTTCCAGCTCCTCACAGGACAGCCGCAGG | + |
Preference number: 6 (lower is better) Translates to: ASSCFQSSASCW*WLSSSSQDSRR Trigger: CCTGCGGCTGTCCTGTGAGGAGCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGACTGGAAGCAGGAACTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | AGCCGGGCCAGTTCCTGCTTCCAGTCCTCAGCCTCCTaGTGGTGCTGGCTTTCCAGCTCCTCACAGGACAGC | + |
Preference number: 6 (lower is better) Translates to: SRASSCFQSSAS*WCWLSSSSQDS Trigger: GCTGTCCTGTGAGGAGCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | GTCGCCATGGATGTCAAGGGAGGACCGGCTAGAGGCTaGGAGGGCCAGTGTCTTGTTCTCCAGGTCCAGCTG | + |
Preference number: 6 (lower is better) Translates to: VAMDVKGGPARG*EGQCLVLQVQL Trigger: CAGCTGGACCTGGAGAACAAGACACTGGCCCTCGCAGCCTCTAGCCGGTCCTCCCTTGACATCCATGGCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 72 bp | GGAGGCTGCACACCTGAGAGGCCTACATCCGCCTCGTaGGATACCGACAGTACCTTGATGCTGGCCTCCAGG | + |
Preference number: 6 (lower is better) Translates to: GGCTPERPTSAS*DTDSTLMLASR Trigger: CCTGGAGGCCAGCATCAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS TCA 72 bp | TCCTGGCGCTGGGTCCTCTCCTCCTGCAAGAGCTTCTaGAGCTCGCGCAGCATCAAGGCATGGTCACTCTGC | + |
Preference number: 6 (lower is better) Translates to: SWRWVLSSCKSF*SSRSIKAWSLC Trigger: GCAGAGTGACCATGCCTTGATGCTGCGCGAGCTTCAGAAGCTCTTGCAGGAGGAGAGGACCCAGCGCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS GCA 72 bp | GCTGCGAGGGCCAGTGTCTTGTTCTCCAGGTCCAGCTaGAGAAGTCGCTCCTTCAGCTTCTGGATGGCCAGC | + |
Preference number: 6 (lower is better) Translates to: AARASVLFSRSS*RSRSFSFWMAS Trigger: GCTGGCCATCCAGAAGCTGAAGGAGCGACTTCTGCAGCTGGACCTGGAGAACAAGACACTGGCCCTCGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 72 bp | AGCTCGCGCAGCATCAAGGCATGGTCACTCTGCTCCTaGGCACGATCGTGCTGCTGTGTAATGAGGCGGGCT | + |
Preference number: 6 (lower is better) Translates to: SSRSIKAWSLCS*ARSCCCVMRRA Trigger: AGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCGCGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS CAA 90 bp | TGCTGGCTTTCCAGCTCCTCACAGGACAGCCGCAGGGAGATATACTaGTCCTTCAGCTCTGCGAGCTGCTCCTGTGCTGCCTCCAGCTCC | + |
Preference number: 6 (lower is better) Translates to: CWLSSSSQDSRREIY*SFSSASCSCAASSS Trigger: GGAGCTGGAGGCAGCACAGGAGCAGCTCGCAGAGCTGAAGGACAAGTATATCTCCCTGCGGCTGTCCTGTGAGGAGCTGGAAAGCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 72 bp | GATCAGCGGCATATGCCCGCCCTGCCAAGGCTTCTCTaGTCTCTTCTAAGCGAAGTTCCAGGTCCTGGCGCT | + |
Preference number: 6 (lower is better) Translates to: DQRHMPALPRLL*SLLSEVPGPGA Trigger: AGCGCCAGGACCTGGAACTTCGCTTAGAAGAGACCAGAGAAGCCTTGGCAGGGCGGGCATATGCCGCTGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS CAA 72 bp | AGCGCGGTAGCCTTTTCCCCGTCAGCAGCCTCGGAGTaGGCCATTATCTCAGGGTCGCAGAGCTTCTCCACA | + |
Preference number: 6 (lower is better) Translates to: SAVAFSPSAASE*AIISGSQSFST Trigger: TGTGGAGAAGCTCTGCGACCCTGAGATAATGGCCAACTCCGAGGCTGCTGACGGGGAAAAGGCTACCGCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 72 bp | TCCAGCTCCTCACAGGACAGCCGCAGGGAGATATACTaGTCCTTCAGCTCTGCGAGCTGCTCCTGTGCTGCC | + |
Preference number: 6 (lower is better) Translates to: SSSSQDSRREIY*SFSSASCSCAA Trigger: GGCAGCACAGGAGCAGCTCGCAGAGCTGAAGGACAAGTATATCTCCCTGCGGCTGTCCTGTGAGGAGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 90 bp | GTGCTGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTGCTCTaGCAGCACCTTCAAGTCTCCCTCCAGGCGACCCCGCTCTTCCTC | + |
Preference number: 6 (lower is better) Translates to: VLLCNEAGFGFCYLL*QHLQVSLQATPLFL Trigger: GAGGAAGAGCGGGGTCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS TCA 72 bp | AGAATCAGGAAACGTGAGACCTGGAGGCTGCACACCTaGGAGGCCTACATCCGCCTCGTGGGATACCGACAG | + |
Preference number: 6 (lower is better) Translates to: RIRKRETWRLHT*EAYIRLVGYRQ Trigger: CTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS TCA 72 bp | GTCAGCTGCTTGGTCTGCAGTTCAAACCCTTCGACCTaGTCAGCGGCATATGCCCGCCCTGCCAAGGCTTCT | + |
Preference number: 6 (lower is better) Translates to: VSCLVCSSNPST*SAAYARPAKAS Trigger: AGAAGCCTTGGCAGGGCGGGCATATGCCGCTGATCAGGTCGAAGGGTTTGAACTGCAGACCAAGCAGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS GCA 72 bp | GTAATGAGGCGGGCTTTGGTTTCTGCTATCTGCTCTTaGAGCACCTTCAAGTCTCCCTCCAGGCGACCCCGC | + |
Preference number: 6 (lower is better) Translates to: VMRRALVSAICS*STFKSPSRRPR Trigger: GCGGGGTCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS CAA 90 bp | CTCTGCTCCTGGGCACGATCGTGCTGCTGTGTAATGAGGCGGGCTTaGGTTTCTGCTATCTGCTCTTGCAGCACCTTCAAGTCTCCCTCC | + |
Preference number: 6 (lower is better) Translates to: LCSWARSCCCVMRRA*VSAICSCSTFKSPS Trigger: GGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS TCA 72 bp | GAGTGGAGCACCGGTCATCCACAGAATCAGGAAACGTaGGACCTGGAGGCTGCACACCTGAGAGGCCTACAT | + |
Preference number: 6 (lower is better) Translates to: EWSTGHPQNQET*DLEAAHLRGLH Trigger: ATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTGTGGATGACCGGTGCTCCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | TCATCCACAGAATCAGGAAACGTGAGACCTGGAGGCTaGACACCTGAGAGGCCTACATCCGCCTCGTGGGAT | + |
Preference number: 6 (lower is better) Translates to: SSTESGNVRPGG*TPERPTSASWD Trigger: ATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTGTGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | CGGGGGTCTGGTCGGTTCTTCTCATCTCGAATGGTTTaGAGCTCACCTTTCAGCTCCTCTACCTCTCGGGTC | + |
Preference number: 6 (lower is better) Translates to: RGSGRFFSSRMV*SSPFSSSTSRV Trigger: GACCCGAGAGGTAGAGGAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGAGAAGAACCGACCAGACCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS CCA 72 bp | CACCTTTCAGCTCCTCTACCTCTCGGGTCAGCTGCTTaGTCTGCAGTTCAAACCCTTCGACCTGATCAGCGG | + |
Preference number: 6 (lower is better) Translates to: HLSAPLPLGSAA*SAVQTLRPDQR Trigger: CCGCTGATCAGGTCGAAGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAGAGGTAGAGGAGCTGAAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS CCA 72 bp | GCAGCCGGGGGTCTGGTCGGTTCTTCTCATCTCGAATaGTTTGCAGCTCACCTTTCAGCTCCTCTACCTCTC | + |
Preference number: 6 (lower is better) Translates to: AAGGLVGSSHLE*FAAHLSAPLPL Trigger: GAGAGGTAGAGGAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGAGAAGAACCGACCAGACCCCCGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS CAA 72 bp | CCGCTCAAACTCTTCCTTCAGCTGCTTCAGCTCCTGTaGGTAGTAGAGCGCGGTAGCCTTTTCCCCGTCAGC | + |
Preference number: 6 (lower is better) Translates to: PLKLFLQLLQLL*VVERGSLFPVS Trigger: GCTGACGGGGAAAAGGCTACCGCGCTCTACTACCAACAGGAGCTGAAGCAGCTGAAGGAAGAGTTTGAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS TCA 72 bp | TCCAAGCTAGTGGCAGTTCCGGTGCTGTCCTCACTGTaGGTGGAGCACCGGTCATCCACAGAATCAGGAAAC | + |
Preference number: 6 (lower is better) Translates to: SKLVAVPVLSSL*VEHRSSTESGN Trigger: GTTTCCTGATTCTGTGGATGACCGGTGCTCCACTCACAGTGAGGACAGCACCGGAACTGCCACTAGCTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | AAGGCATGGTCACTCTGCTCCTGGGCACGATCGTGCTaGTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATC | + |
Preference number: 6 (lower is better) Translates to: KAWSLCSWARSC*CVMRRALVSAI Trigger: GATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS GCA 72 bp | ATCAAGGCATGGTCACTCTGCTCCTGGGCACGATCGTaGTGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCT | + |
Preference number: 6 (lower is better) Translates to: IKAWSLCSWARS*CCVMRRALVSA Trigger: AGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS GCA 72 bp | CAGTTCAGATACCTCAGAGATCTGGCTCTCCAGGGCTaGTACTCTCTGCTCTTCTACCTGAGACTGCTGGCG | + |
Preference number: 6 (lower is better) Translates to: QFRYLRDLALQG*YSLLFYLRLLA Trigger: CGCCAGCAGTCTCAGGTAGAAGAGCAGAGAGTAGCAGCCCTGGAGAGCCAGATCTCTGAGGTATCTGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 72 bp | CCAACTGCTCAGCATAAAGAAAGAAGGTGGGCTCGTTaGCTGCAGCAAGCTGCAGGGCCTGGGTCAAGCTAT | + |
Preference number: 6 (lower is better) Translates to: PTAQHKERRWAR*LQQAAGPGSSY Trigger: ATAGCTTGACCCAGGCCCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCTTTCTTTATGCTGAGCAGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 90 bp | CATCTTATACCGCTCAAACTCTTCCTTCAGCTGCTTCAGCTCCTGTaGGTAGTAGAGCGCGGTAGCCTTTTCCCCGTCAGCAGCCTCGGA | + |
Preference number: 6 (lower is better) Translates to: HLIPLKLFLQLLQLL*VVERGSLFPVSSLG Trigger: TCCGAGGCTGCTGACGGGGAAAAGGCTACCGCGCTCTACTACCAACAGGAGCTGAAGCAGCTGAAGGAAGAGTTTGAGCGGTATAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | TGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTaGTCTTGCAGCACCTTCAAGTCTCCCTCCAGGCGA | + |
Preference number: 6 (lower is better) Translates to: CCVMRRALVSAI*SCSTFKSPSRR Trigger: TCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS CCA 72 bp | CCTTCAGCTTCTGGATGGCCAGCTGGTCTTTCTGCTTaGCTTTCTCGTAGGTGCCCAGCAGTTCAGATACCT | + |
Preference number: 6 (lower is better) Translates to: PSASGWPAGLSA*LSRRCPAVQIP Trigger: AGGTATCTGAACTGCTGGGCACCTACGAGAAAGCCAAGCAGAAAGACCAGCTGGCCATCCAGAAGCTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 72 bp | TTCAAGACATTGATATCCAGACTGGATTCGTCGCCATaGATGTCAAGGGAGGACCGGCTAGAGGCTGCGAGG | + |
Preference number: 6 (lower is better) Translates to: FKTLISRLDSSP*MSREDRLEAAR Trigger: CCTCGCAGCCTCTAGCCGGTCCTCCCTTGACATCCATGGCGACGAATCCAGTCTGGATATCAATGTCTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 72 bp | TCAGGGTCGCAGAGCTTCTCCACATCCAGGGTCACCTaGCTTTTCCTAGCTGCAACCTGTAGTAGCTTCTTG | + |
Preference number: 6 (lower is better) Translates to: SGSQSFSTSRVT*LFLAATCSSFL Trigger: CAAGAAGCTACTACAGGTTGCAGCTAGGAAAAGCCAGGTGACCCTGGATGTGGAGAAGCTCTGCGACCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 72 bp | TGGGCACGATCGTGCTGCTGTGTAATGAGGCGGGCTTaGGTTTCTGCTATCTGCTCTTGCAGCACCTTCAAG | + |
Preference number: 6 (lower is better) Translates to: WARSCCCVMRRA*VSAICSCSTFK Trigger: CTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS CAA 90 bp | AGTGGTCCACGGGCCGCTCTGTCATCTTCAACCCCAAATTCACCCTaGACACTTGTAAGACTGGCTGCGGTATCCAAGCTAGTGGCAGTT | + |
Preference number: 6 (lower is better) Translates to: SGPRAALSSSTPNSP*TLVRLAAVSKLVAV Trigger: AACTGCCACTAGCTTGGATACCGCAGCCAGTCTTACAAGTGTCAAGGGTGAATTTGGGGTTGAAGATGACAGAGCGGCCCGTGGACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 90 bp | GAGCTGGTCCTCTGCAAGGGCTGTCTTCCTCATTTCTTGCTGCAATaGGGCCTGGAAATGGCTTTTAAGACGGGCAGCCTCTTGCTGAAG | + |
Preference number: 6 (lower is better) Translates to: ELVLCKGCLPHFLLQ*GLEMAFKTGSLLLK Trigger: CTTCAGCAAGAGGCTGCCCGTCTTAAAAGCCATTTCCAGGCCCAATTGCAGCAAGAAATGAGGAAGACAGCCCTTGCAGAGGACCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | AACCCCAAATTCACCCTTGACACTTGTAAGACTGGCTaGGGTATCCAAGCTAGTGGCAGTTCCGGTGCTGTC | + |
Preference number: 6 (lower is better) Translates to: NPKFTLDTCKTG*GIQASGSSGAV Trigger: GACAGCACCGGAACTGCCACTAGCTTGGATACCGCAGCCAGTCTTACAAGTGTCAAGGGTGAATTTGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS GCA 72 bp | ATCGTGCTGCTGTGTAATGAGGCGGGCTTTGGTTTCTaGTATCTGCTCTTGCAGCACCTTCAAGTCTCCCTC | + |
Preference number: 6 (lower is better) Translates to: IVLLCNEAGFGF*YLLLQHLQVSL Trigger: GAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 ENSMUST00000165455.2 |
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CDS TCA 72 bp | CCTTCCCCAGGCTCCCATCTTTGGTGTTCTTGCTTTTaGGCACAACTTGGGCTCGCATCTTATACCGCTCAA | + |
Preference number: 6 (lower is better) Translates to: PSPGSHLWCSCF*AQLGLASYTAQ Trigger: TTGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 72 bp | CTGTGTCTCGATGGTCTCCAAGAGATCCTTCTTACTTaGGCCGCCCCCGAAATTCATCCCAAACTTCTCCAT | + |
Preference number: 6 (lower is better) Translates to: LCLDGLQEILLT*AAPEIHPKLLH Trigger: ATGGAGAAGTTTGGGATGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTCTTGGAGACCATCGAGACACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 72 bp | TCTGTGTCTCGATGGTCTCCAAGAGATCCTTCTTACTaGGGCCGCCCCCGAAATTCATCCCAAACTTCTCCA | + |
Preference number: 6 (lower is better) Translates to: SVSRWSPRDPSY*GRPRNSSQTSP Trigger: TGGAGAAGTTTGGGATGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTCTTGGAGACCATCGAGACACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 72 bp | TCCTTCCCCAGGCTCCCATCTTTGGTGTTCTTGCTTTaGAGCACAACTTGGGCTCGCATCTTATACCGCTCA | + |
Preference number: 6 (lower is better) Translates to: SFPRLPSLVFLL*STTWARILYRS Trigger: TGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 90 bp | CTTCCCCAGGCTCCCATCTTTGGTGTTCTTGCTTTTGAGCACAACTaGGGCTCGCATCTTATACCGCTCAAACTCTTCCTTCAGCTGCTT | + |
Preference number: 6 (lower is better) Translates to: LPQAPIFGVLAFEHN*GSHLIPLKLFLQLL Trigger: AAGCAGCTGAAGGAAGAGTTTGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 90 bp | ACCTGTAGTAGCTTCTTGAGCTTCTCCATCTTGTCCTTCAAGACATaGATATCCAGACTGGATTCGTCGCCATGGATGTCAAGGGAGGAC | + |
Preference number: 6 (lower is better) Translates to: TCSSFLSFSILSFKT*ISRLDSSPWMSRED Trigger: GTCCTCCCTTGACATCCATGGCGACGAATCCAGTCTGGATATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 90 bp | TCCAGGGTCACCTGGCTTTTCCTAGCTGCAACCTGTAGTAGCTTCTaGAGCTTCTCCATCTTGTCCTTCAAGACATTGATATCCAGACTG | + |
Preference number: 6 (lower is better) Translates to: SRVTWLFLAATCSSF*SFSILSFKTLISRL Trigger: CAGTCTGGATATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGTTGCAGCTAGGAAAAGCCAGGTGACCCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 90 bp | CTTTTCCTAGCTGCAACCTGTAGTAGCTTCTTGAGCTTCTCCATCTaGTCCTTCAAGACATTGATATCCAGACTGGATTCGTCGCCATGG | + |
Preference number: 6 (lower is better) Translates to: LFLAATCSSFLSFSI*SFKTLISRLDSSPW Trigger: CCATGGCGACGAATCCAGTCTGGATATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGTTGCAGCTAGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CCA 72 bp | CTCCCATCTTTGGTGTTCTTGCTTTTGAGCACAACTTaGGCTCGCATCTTATACCGCTCAAACTCTTCCTTC | + |
Preference number: 6 (lower is better) Translates to: LPSLVFLLLSTT*ARILYRSNSSF Trigger: GAAGGAAGAGTTTGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 72 bp | GCTCCCATCTTTGGTGTTCTTGCTTTTGAGCACAACTaGGGCTCGCATCTTATACCGCTCAAACTCTTCCTT | + |
Preference number: 6 (lower is better) Translates to: APIFGVLAFEHN*GSHLIPLKLFL Trigger: AAGGAAGAGTTTGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 72 bp | AGCTTCTTGAGCTTCTCCATCTTGTCCTTCAAGACATaGATATCCAGACTGGATTCGTCGCCATGGATGTCA | + |
Preference number: 6 (lower is better) Translates to: SFLSFSILSFKT*ISRLDSSPWMS Trigger: TGACATCCATGGCGACGAATCCAGTCTGGATATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 72 bp | GCTGCAACCTGTAGTAGCTTCTTGAGCTTCTCCATCTaGTCCTTCAAGACATTGATATCCAGACTGGATTCG | + |
Preference number: 6 (lower is better) Translates to: AATCSSFLSFSI*SFKTLISRLDS Trigger: CGAATCCAGTCTGGATATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGTTGCAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |
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CDS CAA 72 bp | ACCTGGCTTTTCCTAGCTGCAACCTGTAGTAGCTTCTaGAGCTTCTCCATCTTGTCCTTCAAGACATTGATA | + |
Preference number: 6 (lower is better) Translates to: TWLFLAATCSSF*SFSILSFKTLI Trigger: TATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGTTGCAGCTAGGAAAAGCCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064377.7 ENSMUST00000090511.4 |