RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GCC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029708

Ensembl transcript IDs: ENSMUST00000064377.7, ENSMUST00000090511.4, ENSMUST00000165455.2

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGACCAAACAGGACCACTTTGGAGATCGCTAAGCTCACATGGCTaGTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTT +
Preference number: 1 (lower is better)
Translates to: LDQTGPLWRSLSSHG*SGPSLGWAQRAQLV
Trigger: AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAGCTTAGCGATCTCCAAAGTGGTCCTGTTTGGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR CCA 90 bp CTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCTaGAAGCAAGGTTCCAAGTTTTGGGAGGAACTCACTAGTCCTCAG +
Preference number: 1 (lower is better)
Translates to: LGTLSGMGTKGSAGS*KQGSKFWEELTSPQ
Trigger: CTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCAGGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR CCA 90 bp GGCACAAAGGGCTCAGCTGGTTCCTGGAAGCAAGGTTCCAAGTTTTaGGAGGAACTCACTAGTCCTCAGCCCTTGGGACAAACCGTCACT +
Preference number: 1 (lower is better)
Translates to: GTKGSAGSWKQGSKF*EELTSPQPLGQTVT
Trigger: AGTGACGGTTTGTCCCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCAGGAACCAGCTGAGCCCTTTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR GCA 90 bp CATGTTGAAGGGAAGACCATGAAGTCATCACTCCCACTCTCTGCCTaGCTTAAGCAGGAGAGGTTTGTTTTTAACCCCGTCCTGGACCAA +
Preference number: 1 (lower is better)
Translates to: HVEGKTMKSSLPLSA*LKQERFVFNPVLDQ
Trigger: TTGGTCCAGGACGGGGTTAAAAACAAACCTCTCCTGCTTAAGGCAGGCAGAGAGTGGGAGTGATGACTTCATGGTCTTCCCTTCAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR CCA 90 bp CTTTTTCCTGTCCCTGCAAAAGCAAACACAGCTGGGAATACATCTTaGCAGAAATTCCTCGTATCCCTGCAGGTCCCGGCTTACTGTCCA +
Preference number: 1 (lower is better)
Translates to: LFPVPAKANTAGNTS*QKFLVSLQVPAYCP
Trigger: TGGACAGTAAGCCGGGACCTGCAGGGATACGAGGAATTTCTGCCAAGATGTATTCCCAGCTGTGTTTGCTTTTGCAGGGACAGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR GCA 90 bp AACCTCTGCCAGGATCATAGGGCAGAAAGTATTTCAGCTGAACTCTaGTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCA +
Preference number: 1 (lower is better)
Translates to: NLCQDHRAESISAEL*FSWEGPNSVLESAA
Trigger: TGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTATGATCCTGGCAGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR TCA 90 bp AAAGATGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATaGAGTCATCACTCCCACTCTCTGCCTGCCTTAAGCAGGAGAGGT +
Preference number: 1 (lower is better)
Translates to: KDVISSTSSMLKGRP*SHHSHSLPALSRRG
Trigger: ACCTCTCCTGCTTAAGGCAGGCAGAGAGTGGGAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR GCA 90 bp GCAGAAATTCCTCGTATCCCTGCAGGTCCCGGCTTACTGTCCAAATaGTCTGAAAGAAGCAAAGATGTCATCTCTTCTACAAGCTCCATG +
Preference number: 1 (lower is better)
Translates to: AEIPRIPAGPGLLSK*SERSKDVISSTSSM
Trigger: CATGGAGCTTGTAGAAGAGATGACATCTTTGCTTCTTTCAGAGCATTTGGACAGTAAGCCGGGACCTGCAGGGATACGAGGAATTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR CCA 90 bp AGCAAATTACCTCCTTTTTCCTGTCCCTGCAAAAGCAAACACAGCTaGGAATACATCTTGGCAGAAATTCCTCGTATCCCTGCAGGTCCC +
Preference number: 1 (lower is better)
Translates to: SKLPPFSCPCKSKHS*EYILAEIPRIPAGP
Trigger: GGGACCTGCAGGGATACGAGGAATTTCTGCCAAGATGTATTCCCAGCTGTGTTTGCTTTTGCAGGGACAGGAAAAAGGAGGTAATTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR CCA 90 bp CAGGATCATAGGGCAGAAAGTATTTCAGCTGAACTCTGCTTTTCCTaGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACCTC +
Preference number: 1 (lower is better)
Translates to: QDHRAESISAELCFS*EGPNSVLESAANYL
Trigger: GAGGTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTATGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR TCA 90 bp AATTCCTCGTATCCCTGCAGGTCCCGGCTTACTGTCCAAATGCTCTaGAAGAAGCAAAGATGTCATCTCTTCTACAAGCTCCATGTTGAA +
Preference number: 1 (lower is better)
Translates to: NSSYPCRSRLTVQML*KKQRCHLFYKLHVE
Trigger: TTCAACATGGAGCTTGTAGAAGAGATGACATCTTTGCTTCTTTCAGAGCATTTGGACAGTAAGCCGGGACCTGCAGGGATACGAGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR GCA 90 bp GAAATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTaGCCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGT +
Preference number: 1 (lower is better)
Translates to: EINKNAREEAVEIRA*PSHNKRGTEISGVG
Trigger: ACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
3UTR-3UTR CCA 90 bp TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTTGCATTAATGGCACTTaGCAGATAATCCCATTCTAC +
Preference number: 2 (lower is better)
Translates to: SHGCSGPSLGWAQRAQLVCINGT*QIIPFY
Trigger: GTAGAATGGGATTATCTGCCAAGTGCCATTAATGCA...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR TCA 90 bp ACCATTTCCCTAACTCGCACCTCCTACCCCCAGCCTTTCTCCCTAACCTGCTCCAATCCCATTCTACTTTaGACTGCTCTGAGTTCAACA +
Preference number: 2 (lower is better)
Translates to: TISLTRTSYPQPFSLTCSNPILL*TALSST
Trigger: TGTTGAACTCAGAGCAGTTCAAAGTAGAATGGGATT...GGAGCAGGTTAGGGAGAAAGGCTGGGGGTAGGAGGTGCGAGTTAGGGAAATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR CCA 90 bp CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACCTAGTCCTCAGCCCTTaGGACAAACCGTCACTGTTT +
Preference number: 2 (lower is better)
Translates to: LCFSWEGPNSVLESAANYLVLSP*DKPSLF
Trigger: AAACAGTGACGGTTTGTCCCAAGGGCTGAGGACTAG...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR GCA 90 bp CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTATTTCAGCTGAACTCTaGTTTTCCTGGGAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: QQPQDIFSEGARQRNEGSISAEL*FSWEGP
Trigger: AGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAAT...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR TCA 90 bp CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTGGTCTCTTCCTAGCTTaGTGTATGTCCCCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: QLKSLRFNDHCYYYKDITGLFLA*CMSPEN
Trigger: ATTCTCTGGGGACATACATCAAGCTAGGAAGAGACC...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR GCA 90 bp CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTTTAATCAAAGTTTTCTaGACCCCAAACCCTCACAAA +
Preference number: 2 (lower is better)
Translates to: QQPQDIFSEGARQRNEGSLIKVF*TPNPHK
Trigger: TTTGTGAGGGTTTGGGGTGCAGAAAACTTTGATTAA...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR CCA 90 bp TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGACTGTTTTTAACTCCCTaGTCTCTTCCTAGCTTGATG +
Preference number: 2 (lower is better)
Translates to: LLLLQRHHFCSIEVCSRRLFLTP*SLPSLM
Trigger: CATCAAGCTAGGAAGAGACCAGGGAGTTAAAAACAG...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR TCA 90 bp CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTACTGTCCAAATGCTCTaGAAGAAGCAAAGATGTCAT +
Preference number: 2 (lower is better)
Translates to: QLKSLRFNDHCYYYKDITTVQML*KKQRCH
Trigger: ATGACATCTTTGCTTCTTTCAGAGCATTTGGACAGT...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR CCA 90 bp AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATAAAAGCAAACACAGCTaGGAATACATCTTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: RCIDTTIKKTQLKSLRFNKSKHS*EYILAE
Trigger: TTCTGCCAAGATGTATTCCCAGCTGTGTTTGCTTTT...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR CCA 72 bp CTAAGCTCACATGGCTGCTCGGGACCCTCTCTGGGATaGGCACAAAGGGCTCAGCTGGTTCCTGGAAGCAAG +
Preference number: 3 (lower is better)
Translates to: LSSHGCSGPSLG*AQRAQLVPGSK
Trigger: CTTGCTTCCAGGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAGCTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR GCA 72 bp ACAGGACCACTTTGGAGATCGCTAAGCTCACATGGCTaGTCGGGACCCTCTCTGGGATGGGCACAAAGGGCT +
Preference number: 3 (lower is better)
Translates to: TGPLWRSLSSHG*SGPSLGWAQRA
Trigger: AGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAGCTTAGCGATCTCCAAAGTGGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR CCA 72 bp GGCTCAGCTGGTTCCTGGAAGCAAGGTTCCAAGTTTTaGGAGGAACTCACTAGTCCTCAGCCCTTGGGACAA +
Preference number: 3 (lower is better)
Translates to: GSAGSWKQGSKF*EELTSPQPLGQ
Trigger: TTGTCCCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCAGGAACCAGCTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR GCA 72 bp GGGAAGACCATGAAGTCATCACTCCCACTCTCTGCCTaGCTTAAGCAGGAGAGGTTTGTTTTTAACCCCGTC +
Preference number: 3 (lower is better)
Translates to: GKTMKSSLPLSA*LKQERFVFNPV
Trigger: GACGGGGTTAAAAACAAACCTCTCCTGCTTAAGGCAGGCAGAGAGTGGGAGTGATGACTTCATGGTCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR GCA 72 bp CCTCGTATCCCTGCAGGTCCCGGCTTACTGTCCAAATaGTCTGAAAGAAGCAAAGATGTCATCTCTTCTACA +
Preference number: 3 (lower is better)
Translates to: PRIPAGPGLLSK*SERSKDVISST
Trigger: TGTAGAAGAGATGACATCTTTGCTTCTTTCAGAGCATTTGGACAGTAAGCCGGGACCTGCAGGGATACGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR TCA 72 bp CCACTACGAGATGCTGTCTCAATACTGGCAGTACCCTaGGAGCCCAAGGATAAAACTGCATTAATGGCACTT +
Preference number: 3 (lower is better)
Translates to: PLRDAVSILAVP*EPKDKTALMAL
Trigger: AAGTGCCATTAATGCAGTTTTATCCTTGGGCTCTCAGGGTACTGCCAGTATTGAGACAGCATCTCGTAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR TCA 72 bp TATCCCTGCAGGTCCCGGCTTACTGTCCAAATGCTCTaGAAGAAGCAAAGATGTCATCTCTTCTACAAGCTC +
Preference number: 3 (lower is better)
Translates to: YPCRSRLTVQML*KKQRCHLFYKL
Trigger: GAGCTTGTAGAAGAGATGACATCTTTGCTTCTTTCAGAGCATTTGGACAGTAAGCCGGGACCTGCAGGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR GCA 72 bp CAGGATCATAGGGCAGAAAGTATTTCAGCTGAACTCTaGTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: QDHRAESISAEL*FSWEGPNSVLE
Trigger: TTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTATGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR CCA 72 bp CCTCCTTTTTCCTGTCCCTGCAAAAGCAAACACAGCTaGGAATACATCTTGGCAGAAATTCCTCGTATCCCT +
Preference number: 3 (lower is better)
Translates to: PPFSCPCKSKHS*EYILAEIPRIP
Trigger: AGGGATACGAGGAATTTCTGCCAAGATGTATTCCCAGCTGTGTTTGCTTTTGCAGGGACAGGAAAAAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR TCA 72 bp GAAGCAAAGATGTCATCTCTTCTACAAGCTCCATGTTaGAGGGAAGACCATGAAGTCATCACTCCCACTCTC +
Preference number: 3 (lower is better)
Translates to: EAKMSSLLQAPC*REDHEVITPTL
Trigger: GAGAGTGGGAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACATCTTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR TCA 72 bp CTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTaGGGTATCCCTCCCTGGAGTGAAGCTCATGGATTT +
Preference number: 3 (lower is better)
Translates to: LRNLLSVRQLKP*GIPPWSEAHGF
Trigger: AAATCCATGAGCTTCACTCCAGGGAGGGATACCTCAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR CAA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACCGGAGATTTCAGGAGTaGGTAAGAAAACAAAAAGTA +
Preference number: 3 (lower is better)
Translates to: INKNAREEAVEIRACPSHRRFQE*VRKQKV
Trigger: TACTTTTTGTTTTCTTACCAACTCCTGAAATCTCCG...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
3UTR TCA 72 bp TACATACATAGTTACTGTATATGTTCCAAAGTCAGATaGCCTCCCCTGGGAGTCACATTTATTCCTAGCTCT +
Preference number: 3 (lower is better)
Translates to: YIHSYCICSKVR*PPLGVTFIPSS
Trigger: AGAGCTAGGAATAAATGTGACTCCCAGGGGAGGTCATCTGACTTTGGAACATATACAGTAACTATGTATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR CAA 90 bp ATAACTTTCCAGGGTACCATGAATCCTGATTGTAGTGAAAAAGAAGCACTCATAATTAATGGCCAAACATaGATCTTTCAGGTCCAAAGG +
Preference number: 3 (lower is better)
Translates to: ITFQGTMNPDCSEKEALIINGQT*IFQVQR
Trigger: CCTTTGGACCTGAAAGATCAATGTTTGGCCATTAAT...TATGAGTGCTTCTTTTTCACTACAATCAGGATTCATGGTACCCTGGAAAGTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR-3UTR CAA 90 bp CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTCGGAGATTTCAGGAGTaGGTAAGAAAACAAAAAGTA +
Preference number: 3 (lower is better)
Translates to: QLKSLRFNDHCYYYKDITRRFQE*VRKQKV
Trigger: TACTTTTTGTTTTCTTACCAACTCCTGAAATCTCCG...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
3UTR TCA 72 bp GAATTGGCAACTCATAGTGCTTTGACCCAAATTTTCTaGGAGCTACTTTCCTTAAAGAACAGAATTAACCAA +
Preference number: 3 (lower is better)
Translates to: ELATHSALTQIF*ELLSLKNRINQ
Trigger: TTGGTTAATTCTGTTCTTTAAGGAAAGTAGCTCTCAGAAAATTTGGGTCAAAGCACTATGAGTTGCCAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp CTCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTAGCCTTTCCTGCAGCTaGTGGGCTTCTACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTWLLGTLSGMGTKGSAGSLSCS*WASTSS
Trigger: GCTGGAGGTAGAAGCCCATCAGCTGCAGGAAAGGCT...ACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTAGACTTTGGGGGAAGTaGTCCACGGGCCGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SHGCSGPSLGWAQRAQLVRLWGK*STGRSV
Trigger: GACAGAGCGGCCCGTGGACCACTTCCCCCAAAGTCT...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTTCCCTGAAGTCCAGCTaGCTGCGCTCCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SHGCSGPSLGWAQRAQLVSLKSS*LRSSSC
Trigger: GCAGGAACTGGAGCGCAGCCAGCTGGACTTCAGGGA...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ACCATTTCCCTAACTCGCACCTCCTACCCCCAGCCTTTCTCCCTAACCTGCTCCCGAAGTTCCAGGTCCTaGCGCTGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TISLTRTSYPQPFSLTCSRSSRS*RWVLSS
Trigger: GGAGGAGAGGACCCAGCGCCAGGACCTGGAACTTCG...GGAGCAGGTTAGGGAGAAAGGCTGGGGGTAGGAGGTGCGAGTTAGGGAAATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTACTAACGCCACTCTCTaGCCCACTGGCCTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SHGCSGPSLGWAQRAQLVTNATL*PTGLFR
Trigger: TCTGAAGAGGCCAGTGGGTCAGAGAGTGGCGTTAGT...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp ACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCACCTCTCGGGTCAGCTaGTTGGTCTGCAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: TWLLGTLSGMGTKGSAGSTSRVS*LVCSSN
Trigger: GTTTGAACTGCAGACCAAGCAGCTGACCCGAGAGGT...GGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCCCTTCAGCTTCTGGATaGCCAGCTGGTCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TWLLGTLSGMGTKGSAGSPSASG*PAGLSA
Trigger: AGCAGAAAGACCAGCTGGCCATCCAGAAGCTGAAGG...GGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTGCTGGTCTTTCTGCTTaGCTTTCTCGTAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SHGCSGPSLGWAQRAQLVAGLSA*LSRRCP
Trigger: TGGGCACCTACGAGAAAGCCAAGCAGAAAGACCAGC...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CTCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCATCTCGAATGGTTTaGAGCTCACCTTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LTWLLGTLSGMGTKGSAGSSRMV*SSPFSS
Trigger: GGAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGA...ACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp TGGAAGCAAGGTTCCAAGTTTTGGGAGGAACTCACTAGTCCTCAGCCCTTGGGAAGCCGGGCCAGTTCCTaGTTCCAGTCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: WKQGSKFWEELTSPQPLGSRASS*FQSSAS
Trigger: GGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCT...TCCCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACATGGCGGTGAGCGTCTaGTGGCGGCCCAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LCFSWEGPNSVLESAANYMAVSV*WRPRLS
Trigger: CGACAGCCTGGGCCGCCAGCAGACGCTCACCGCCAT...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCACATACAGACCACTACGAGATGCTGTCTCAATACTGGCAGTACCCTGAGAGCCAGTCCTCAGCCTCCTaGTGGTGCTGGCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PHTDHYEMLSQYWQYPESQSSAS*WCWLSS
Trigger: GCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGACTG...GCTCTCAGGGTACTGCCAGTATTGAGACAGCATCTCGTAGTGGTCTGTATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATGCCGATGGAGCTGCTaGAGCCGGGCCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRCRWSC*SRASSC
Trigger: GCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATTCCTGCCGATGGAGCTaGTGCAGCCGGGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNSCRWS*CSRASS
Trigger: GGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGA...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGGGCCCGGTCCCGCTaGTTGTGTAGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKRARSR*LCSSSS
Trigger: GGAGGAGGAGCTACACAAGCAGCGGGACCGGGCCCT...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCTCCCACGGGGCTTCTaGGTCCTGGCAACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNLPRGF*VLATQR
Trigger: CCTCTGGGTTGCCAGGACGCAGAAGCCCCGTGGGAG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTCCTCTGCCTTTTTATTaGCATCCTCTAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LTWLLGTLSGMGTKGSAGPLPFY*HPLSPA
Trigger: AGCAGGACTTAGAGGATGCCAATAAAAAGGCAGAGG...ACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGCCGGGCCAGTTCCTaGTTCCAGTCCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKSRASS*FQSSAS
Trigger: GGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCT...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTCCAGGTCCTGGCGCTaGGTCCTCTCCTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHSRSWR*VLSSCK
Trigger: CTTGCAGGAGGAGAGGACCCAGCGCCAGGACCTGGA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATTCCAGGTCCTGGCGCTaGGTCCTCTCCTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNSRSWR*VLSSCK
Trigger: CTTGCAGGAGGAGAGGACCCAGCGCCAGGACCTGGA...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCGAAGTTCCAGGTCCTaGCGCTGGGTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNRSSRS*RWVLSS
Trigger: GGAGGAGAGGACCCAGCGCCAGGACCTGGAACTTCG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACGGGGCTTCTGCGTCCTaGCAACCCAGAGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHGASAS*QPRGQG
Trigger: GCCTTGTCCTCTGGGTTGCCAGGACGCAGAAGCCCC...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
3UTR CAA 72 bp CACTCCCACTCTCTGCCTGCCTTAAGCAGGAGAGGTTaGTTTTTAACCCCGTCCTGGACCAAACAGGACCAC +
Preference number: 4 (lower is better)
Translates to: HSHSLPALSRRG*FLTPSWTKQDH
Trigger: GTGGTCCTGTTTGGTCCAGGACGGGGTTAAAAACAAACCTCTCCTGCTTAAGGCAGGCAGAGAGTGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGAGTGCTGTCCTCACTGTaGGTGGAGCACCGGTCATCC +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRVLSSL*VEHRSS
Trigger: GGATGACCGGTGCTCCACTCACAGTGAGGACAGCAC...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTTGTCCTTCAAGACATTaGTATCCAGACTGGATTCGT +
Preference number: 4 (lower is better)
Translates to: SHGCSGPSLGWAQRAQLVCPSRH*YPDWIR
Trigger: ACGAATCCAGTCTGGATATCAATGTCTTGAAGGACA...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAACTGGGTCAAGCTATCTaGGGAGGCTGTGTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKLGQAI*GGCVGW
Trigger: CCAGCCGACACAGCCTCCTCAGATAGCTTGACCCAG...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTGGAAGCAAGGTTCCAAGTTTTGGGAGGAACTCACTAGTCCTCAGCCCTTGGGCGGGCTTTGGTTTCTaGTATCTGCTCTTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PGSKVPSFGRNSLVLSPWAGFGF*YLLLQH
Trigger: GTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGC...CCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGAGGCATATGCCCGCCCTaGCAAGGCTTCTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRGICPP*QGFSGL
Trigger: GAGACCAGAGAAGCCTTGGCAGGGCGGGCATATGCC...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCTGATCAGCGGCATATaGCCGCCCTGCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNLISGI*PPCQGF
Trigger: GAAGCCTTGGCAGGGCGGGCATATGCCGCTGATCAG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATTCAGCTCTGCGAGCTaGTCCTGTGCTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKFSSAS*SCAASS
Trigger: GCTGGAGGCAGCACAGGAGCAGCTCGCAGAGCTGAA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACTTCAGCTCTGCGAGCTaGTCCTGTGCTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LCFSWEGPNSVLESAANYFSSAS*SCAASS
Trigger: GCTGGAGGCAGCACAGGAGCAGCTCGCAGAGCTGAA...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCTCCTGCCGATGGAGCTaGTGCAGCCGGGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: CHLFYKLHVEGKTMKSSLSCRWS*CSRASS
Trigger: GGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGA...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCAGGGCCCGGTCCCGCTaGTTGTGTAGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CHLFYKLHVEGKTMKSSLRARSR*LCSSSS
Trigger: GGAGGAGGAGCTACACAAGCAGCGGGACCGGGCCCT...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAGGCCTCTTCAGACTTTaGGGGAAGTGGTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKGLFRL*GKWSTG
Trigger: GCCCGTGGACCACTTCCCCCAAAGTCTGAAGAGGCC...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACCTGCAGCCGGGGGTCTaGTCGGTTCTTCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHLQPGV*SVLLIS
Trigger: CGAGATGAGAAGAACCGACCAGACCCCCGGCTGCAG...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGAGCCTCCTGCTGGTGCTaGCTTTCCAGCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRASCWC*LSSSSQ
Trigger: CTGTGAGGAGCTGGAAAGCCAGCACCAGCAGGAGGC...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTTCCAGTTCCTGCCGATaGAGCTGCTGCAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QQPQDIFSEGARQRNEGSSSSCR*SCCSRA
Trigger: GGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGA...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTCCCTGAAGTCCAGCTaGCTGCGCTCCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHSLKSS*LRSSSC
Trigger: GCAGGAACTGGAGCGCAGCCAGCTGGACTTCAGGGA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAGGGCAGAAAGTATTTCAGCTGAACTCTGCTTTTCCTGGGAGGGTCCTAACAGGGGCTTCTGCGTCCTaGCAACCCAGAGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: IGQKVFQLNSAFPGRVLTGASAS*QPRGQG
Trigger: GCCTTGTCCTCTGGGTTGCCAGGACGCAGAAGCCCC...TGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGAAGAAGGTGGGCTCGTTaGCTGCAGCAAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRRRWAR*LQQAAG
Trigger: CCCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCT...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
3UTR CAA 72 bp TGTCCCTGCAAAAGCAAACACAGCTGGGAATACATCTaGGCAGAAATTCCTCGTATCCCTGCAGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: CPCKSKHSWEYI*AEIPRIPAGPG
Trigger: GCCGGGACCTGCAGGGATACGAGGAATTTCTGCCAAGATGTATTCCCAGCTGTGTTTGCTTTTGCAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATGCTTCCTCAGAGATGTaGTCTCCACCTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNASSEM*SPPPCG
Trigger: CCCGCAAGGAGGTGGAGATCACATCTCTGAGGAAGC...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAGCCTTTCCTGCAGCTaGTGGGCTTCTACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNSLSCS*WASTSS
Trigger: GCTGGAGGTAGAAGCCCATCAGCTGCAGGAAAGGCT...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATGGGCACGATCGTGCTaGTGTGTAATGAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRWARSC*CVMRRA
Trigger: AGCCCGCCTCATTACACAGCAGCACGATCGTGCCCA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGAAAGGCATGGTCACTCTaGTCCTGGGCACGATCGTGC +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRKAWSL*SWARSC
Trigger: GCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTT...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAACTTGTCCTTCAGCTCTaGGAGCTGCTCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKLVLQL*ELLLCC
Trigger: GCAGCACAGGAGCAGCTCGCAGAGCTGAAGGACAAG...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCTTGTCCTTCAGCTCTaGGAGCTGCTCCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNLVLQL*ELLLCC
Trigger: GCAGCACAGGAGCAGCTCGCAGAGCTGAAGGACAAG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATTGGCTGCAGCAAGCTaGAGGGCCTGGGTCAAGCTA +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRLAAAS*RAWVKL
Trigger: TAGCTTGACCCAGGCCCTGCAGCTTGCTGCAGCCAA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATGGCGGTGAGCGTCTaGTGGCGGCCCAGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKMAVSV*WRPRLS
Trigger: CGACAGCCTGGGCCGCCAGCAGACGCTCACCGCCAT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTAGTCCTCAGCCCTTGGGACAAACCGTCACTGTTTTTAACTCCCTGGTCTCTTCCTACATCCGCCTCGTaGGATACCGACAGTACCTTG +
Preference number: 4 (lower is better)
Translates to: LVLSPWDKPSLFLTPWSLPTSAS*DTDSTL
Trigger: CAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGG...AAGAGACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCAAGGGCTGAGGACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACCTCACTACCGGCAGATaGCCCATCCCCACTGCTACT +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHLTTGR*PIPTAT
Trigger: AGTAGCAGTGGGGATGGGCCATCTGCCGGTAGTGAG...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGACTCACTACCGGCAGATaGCCCATCCCCACTGCTACT +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRLTTGR*PIPTAT
Trigger: AGTAGCAGTGGGGATGGGCCATCTGCCGGTAGTGAG...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTGGTCACTCTGCTCCTaGGCACGATCGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHWSLCS*ARSCCC
Trigger: ACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAACGCAGCATCAAGGCATaGTCACTCTGCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKRSIKA*SLCSWA
Trigger: TGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCG...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTGACTGCTGGCGGAGCTaGTCCTCTGCAAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QQPQDIFSEGARQRNEGSDCWRS*SSARAV
Trigger: GACAGCCCTTGCAGAGGACCAGCTCCGCCAGCAGTC...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CCACATACAGACCACTACGAGATGCTGTCTCAATACTGGCAGTACCCTGAGAGCACATCCAGGGTCACCTaGCTTTTCCTAGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: PHTDHYEMLSQYWQYPESTSRVT*LFLAAT
Trigger: GGTTGCAGCTAGGAAAAGCCAGGTGACCCTGGATGT...GCTCTCAGGGTACTGCCAGTATTGAGACAGCATCTCGTAGTGGTCTGTATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACCACGCACCACATCCTTaGGTCTTGCCTGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHHAPHP*VLPGTG
Trigger: TCCAGTACCAGGCAAGACTCAAGGATGTGGTGCGTG...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACACTAACGCCACTCTCTaGCCCACTGGCCTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHTNATL*PTGLFR
Trigger: TCTGAAGAGGCCAGTGGGTCAGAGAGTGGCGTTAGT...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATCCTGCAAGAGCTTCTaGAGCTCGCGCAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRSCKSF*SSRSIK
Trigger: CTTGATGCTGCGCGAGCTTCAGAAGCTCTTGCAGGA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTTCTCCAGGTCCAGCTaGAGAAGTCGCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHFSRSS*RSRSFS
Trigger: GCTGAAGGAGCGACTTCTGCAGCTGGACCTGGAGAA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTGCCGATGGAGCTGCTaGAGCCGGGCCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HTQFQPKKFVICQAVKALCRWSC*SRASSC
Trigger: GCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAACTCCCACGGGGCTTCTaGGTCCTGGCAACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKLPRGF*VLATQR
Trigger: CCTCTGGGTTGCCAGGACGCAGAAGCCCCGTGGGAG...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTGTCCTCACTGTGAGTaGAGCACCGGTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHCPHCE*STGHPQ
Trigger: CTGTGGATGACCGGTGCTCCACTCACAGTGAGGACA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATGTCCTCACTGTGAGTaGAGCACCGGTCATCCACAG +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRCPHCE*STGHPQ
Trigger: CTGTGGATGACCGGTGCTCCACTCACAGTGAGGACA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAGGGCAGAAAGTATTTCAGCTGAACTCTGCTTTTCCTGGGAGGGTCCTAACACGCAGCATCAAGGCATaGTCACTCTGCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: IGQKVFQLNSAFPGRVLTRSIKA*SLCSWA
Trigger: TGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCG...TGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACCGCTCCTTCAGCTTCTaGATGGCCAGCTGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LCFSWEGPNSVLESAANYRSFSF*MASWSF
Trigger: GAAAGACCAGCTGGCCATCCAGAAGCTGAAGGAGCG...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCGCCTCCTGCTGGTGCTaGCTTTCCAGCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: CHLFYKLHVEGKTMKSSLASCWC*LSSSSQ
Trigger: CTGTGAGGAGCTGGAAAGCCAGCACCAGCAGGAGGC...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp ATAGGGCAGAAAGTATTTCAGCTGAACTCTGCTTTTCCTGGGAGGGTCCTAACACACGCACCACATCCTTaGGTCTTGCCTGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: IGQKVFQLNSAFPGRVLTHAPHP*VLPGTG
Trigger: TCCAGTACCAGGCAAGACTCAAGGATGTGGTGCGTG...TGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATCAGTGTGCGGTCCCTaGAGTCCAGCTGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKSVCGP*SPAGCA
Trigger: AGCGCAGCCAGCTGGACTTCAGGGACCGCACACTGA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTTCAGTGTGCGGTCCCTaGAGTCCAGCTGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: QVGQMLTVKEYIHSYCICSVCGP*SPAGCA
Trigger: AGCGCAGCCAGCTGGACTTCAGGGACCGCACACTGA...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACGTCAGCTGCTTGGTCTaGAGTTCAAACCCTTCGACC +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHVSCLV*SSNPST
Trigger: GGTCGAAGGGTTTGAACTGCAGACCAAGCAGCTGAC...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAACCTCTCGGGTCAGCTaGTTGGTCTGCAGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKTSRVS*LVCSSN
Trigger: GTTTGAACTGCAGACCAAGCAGCTGACCCGAGAGGT...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp ATAGGGCAGAAAGTATTTCAGCTGAACTCTGCTTTTCCTGGGAGGGTCCTAACAGGTTGGCTCCCTCCCTaGTCTGGTCCCTCATATTCT +
Preference number: 4 (lower is better)
Translates to: IGQKVFQLNSAFPGRVLTGWLPP*SGPSYS
Trigger: AGAATATGAGGGACCAGAGCAGGGAGGGAGCCAACC...TGTTAGGACCCTCCCAGGAAAAGCAGAGTTCAGCTGAAATACTTTCTGCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCTCGGGTCAGCTGCTTaGTCTGCAGTTCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNLGSAA*SAVQTL
Trigger: AAGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAGACTGCTGGCGGAGCTaGTCCTCTGCAAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKDCWRS*SSARAV
Trigger: GACAGCCCTTGCAGAGGACCAGCTCCGCCAGCAGTC...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACGATACCTCAGAGATCTaGCTCTCCAGGGCTGCTACT +
Preference number: 4 (lower is better)
Translates to: LCFSWEGPNSVLESAANYDTSEI*LSRAAT
Trigger: AGTAGCAGCCCTGGAGAGCCAGATCTCTGAGGTATC...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAGCTGGTCTTTCTGCTTaGCTTTCTCGTAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKAGLSA*LSRRCP
Trigger: TGGGCACCTACGAGAAAGCCAAGCAGAAAGACCAGC...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAACCTTCAGCTTCTGGATaGCCAGCTGGTCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKPSASG*PAGLSA
Trigger: AGCAGAAAGACCAGCTGGCCATCCAGAAGCTGAAGG...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATCCAGTTCCTGCCGATaGAGCTGCTGCAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKSSSCR*SCCSRA
Trigger: GGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGA...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp TGGAAGCAAGGTTCCAAGTTTTGGGAGGAACTCACTAGTCCTCAGCCCTTGGGACATAAAGAAAGAAGGTaGGCTCGTTGGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: WKQGSKFWEELTSPQPLGHKERR*ARWLQQ
Trigger: TTGCTGCAGCCAACGAGCCCACCTTCTTTCTTTATG...TCCCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATTTTTCGATGTGGCTCTaGAGGGCTCCAACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNFSMWL*RAPTSS
Trigger: AGAGGAGGTTGGAGCCCTCCAGAGCCACATCGAAAA...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
3UTR CAA 72 bp TCCAAGTTTTGGGAGGAACTCACTAGTCCTCAGCCCTaGGGACAAACCGTCACTGTTTTTAACTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SKFWEELTSPQP*GQTVTVFNSLV
Trigger: GACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp TGGGACAAACCGTCACTGTTTTTAACTCCCTGGTCTCTTCCTAGCTTGATGTATATACCGACAGTACCTTaGTGCTGGCCTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: WDKPSLFLTPWSLPSLMYIPTVP*CWPPGL
Trigger: AAGCCCTGGAGGCCAGCATCAAGGTACTGTCGGTAT...ATACATCAAGCTAGGAAGAGACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTGGTGTTCTTGCTTTTaGGCACAACTTGGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHWCSCF*AQLGLA
Trigger: TGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAACTTGTAAGACTGGCTaGGGTATCCAAGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKTCKTG*GIQASG
Trigger: GCCACTAGCTTGGATACCGCAGCCAGTCTTACAAGT...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACACCCCGCTCTTCCTCTaGCTTTTTATTGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LCFSWEGPNSVLESAANYTPLFL*LFIGIL
Trigger: GAGGATGCCAATAAAAAGGCAGAGGAAGAGCGGGGT...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATCTGCTATCTGCTCTTaGAGCACCTTCAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKSAICS*STFKSP
Trigger: GGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGGGCATATGCCCGCCCTaGCAAGGCTTCTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: HTQFQPKKFVICQAVKALGICPP*QGFSGL
Trigger: GAGACCAGAGAAGCCTTGGCAGGGCGGGCATATGCC...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTCTGATCAGCGGCATATaGCCGCCCTGCCAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: QVGQMLTVKEYIHSYCICLISGI*PPCQGF
Trigger: GAAGCCTTGGCAGGGCGGGCATATGCCGCTGATCAG...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAACAGTCCTCAGCCTCCTaGTGGTGCTGGCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKQSSAS*WCWLSS
Trigger: GCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGACTG...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CTAGTCCTCAGCCCTTGGGACAAACCGTCACTGTTTTTAACTCCCTGGTCTCTTTCCAGCCTGTGTTTCTaGTTCCTCAGAGATGTGATC +
Preference number: 4 (lower is better)
Translates to: LVLSPWDKPSLFLTPWSLSSLCF*FLRDVI
Trigger: GATCACATCTCTGAGGAAGCAGAAACACAGGCTGGA...AAGAGACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCAAGGGCTGAGGACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATGAGATCCTTCTTACTTaGGCCGCCCCCGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNEILLT*AAPEIH
Trigger: ATGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTC...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACGAGATCCTTCTTACTTaGGCCGCCCCCGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHEILLT*AAPEIH
Trigger: ATGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTC...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGACTTTGGGGGAAGTaGTCCACGGGCCGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKRLWGK*STGRSV
Trigger: GACAGAGCGGCCCGTGGACCACTTCCCCCAAAGTCT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CCTGGAAGCAAGGTTCCAAGTTTTGGGAGGAACTCACTAGTCCTCAGCCCTTGGTCTTCTCATCTCGAATaGTTTGCAGCTCACCTTTCA +
Preference number: 4 (lower is better)
Translates to: PGSKVPSFGRNSLVLSPWSSHLE*FAAHLS
Trigger: TGAAAGGTGAGCTGCAAACCATTCGAGATGAGAAGA...CCAAGGGCTGAGGACTAGTGAGTTCCTCCCAAAACTTGGAACCTTGCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTCTGCAGCCGGGGGTCTaGTCGGTTCTTCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: QVGQMLTVKEYIHSYCICLQPGV*SVLLIS
Trigger: CGAGATGAGAAGAACCGACCAGACCCCCGGCTGCAG...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATTGGGCCTGGAAATaGCTTTTAAGACGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHNWAWK*LLRRAA
Trigger: GGCTGCCCGTCTTAAAAGCCATTTCCAGGCCCAATT...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATTCTGGATGGCCAGCTaGTCTTTCTGCTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRFWMAS*SFCLAF
Trigger: GAAAGCCAAGCAGAAAGACCAGCTGGCCATCCAGAA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATCCTCAGCCTCCTGCTaGTGCTGGCTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKSSASC*CWLSSS
Trigger: GGAGCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTCCTCAGCCTCCTGCTaGTGCTGGCTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HTQFQPKKFVICQAVKALSSASC*CWLSSS
Trigger: GGAGCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCCTGTAGTAGCTTCTTaGGCTTCTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: NKNAREEAVEIRACPSHNPVVAS*ASPSCP
Trigger: AGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTGCTTCCTCAGAGATGTaGTCTCCACCTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: QVGQMLTVKEYIHSYCICASSEM*SPPPCG
Trigger: CCCGCAAGGAGGTGGAGATCACATCTCTGAGGAAGC...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATGGGCACGATCGTGCTaGTGTGTAATGAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKWARSC*CVMRRA
Trigger: AGCCCGCCTCATTACACAGCAGCACGATCGTGCCCA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATCATCTCGAATGGTTTaGAGCTCACCTTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKSSRMV*SSPFSS
Trigger: GGAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CTAGTCCTCAGCCCTTGGGACAAACCGTCACTGTTTTTAACTCCCTGGTCTCTTTTCCTCATTTCTTGCTaGAATTGGGCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: LVLSPWDKPSLFLTPWSLFLISC*NWAWKW
Trigger: CCATTTCCAGGCCCAATTGCAGCAAGAAATGAGGAA...AAGAGACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCAAGGGCTGAGGACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTGGTCACTCTGCTCCTaGGCACGATCGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HTQFQPKKFVICQAVKALWSLCS*ARSCCC
Trigger: ACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACCTGCCAAGGCTTCTCTaGTCTCTTCTAAGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHLPRLL*SLLSEV
Trigger: AACTTCGCTTAGAAGAGACCAGAGAAGCCTTGGCAG...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAAGAAGGTGGGCTCGTTaGCTGCAGCAAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKRRWAR*LQQAAG
Trigger: CCCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACATATTCTTTTCGATGTaGCTCTGGAGGGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: LCFSWEGPNSVLESAANYIFFSM*LWRAPT
Trigger: GGTTGGAGCCCTCCAGAGCCACATCGAAAAGAATAT...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp ATAACTTTCCAGGGTACCATGAATCCTGATTGTAGTGAAAAAGAAGCACTCATAGTGCTGTCCTCACTGTaGGTGGAGCACCGGTCATCC +
Preference number: 4 (lower is better)
Translates to: ITFQGTMNPDCSEKEALIVLSSL*VEHRSS
Trigger: GGATGACCGGTGCTCCACTCACAGTGAGGACAGCAC...TATGAGTGCTTCTTTTTCACTACAATCAGGATTCATGGTACCCTGGAAAGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGATCCTGCAAGAGCTTCTaGAGCTCGCGCAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: LLLLQRHHFCSIEVCSRRSCKSF*SSRSIK
Trigger: CTTGATGCTGCGCGAGCTTCAGAAGCTCTTGCAGGA...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTCTGGGTCAAGCTATCTaGGGAGGCTGTGTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QLKSLRFNDHCYYYKDITLGQAI*GGCVGW
Trigger: CCAGCCGACACAGCCTCCTCAGATAGCTTGACCCAG...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATGGTACTGGAGAAGCTaGTTTTTCTGTGTCTCGATG +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKWYWRS*FFCVSM
Trigger: CATCGAGACACAGAAAAAGCAGCTTCTCCAGTACCA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTTCCTCATTTCTTGCTaGAATTGGGCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: INKNAREEAVEIRACPSHFLISC*NWAWKW
Trigger: CCATTTCCAGGCCCAATTGCAGCAAGAAATGAGGAA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTTGGCTTTCTCGTAGGTaGCCAGCAGTTCAGATACCT +
Preference number: 4 (lower is better)
Translates to: QQPQDIFSEGARQRNEGSWLSRR*PAVQIP
Trigger: AGGTATCTGAACTGCTGGGCACCTACGAGAAAGCCA...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGATTCTCCAGGTCCAGCTaGAGAAGTCGCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLLLQRHHFCSIEVCSRRFSRSS*RSRSFS
Trigger: GCTGAAGGAGCGACTTCTGCAGCTGGACCTGGAGAA...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATGGCCTCTTCAGACTTTaGGGGAAGTGGTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: RCIDTTIKKTQLKSLRFNGLFRL*GKWSTG
Trigger: GCCCGTGGACCACTTCCCCCAAAGTCTGAAGAGGCC...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp TGGGACAAACCGTCACTGTTTTTAACTCCCTGGTCTCTTCCTAGCTTGATGTATAATTGGGCCTGGAAATaGCTTTTAAGACGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: WDKPSLFLTPWSLPSLMYNWAWK*LLRRAA
Trigger: GGCTGCCCGTCTTAAAAGCCATTTCCAGGCCCAATT...ATACATCAAGCTAGGAAGAGACCAGGGAGTTAAAAACAGTGACGGTTTGTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAATACCGACAGTACCTTaGTGCTGGCCTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKIPTVP*CWPPGL
Trigger: AAGCCCTGGAGGCCAGCATCAAGGTACTGTCGGTAT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACAGAATCAGGAAACGTaGGACCTGGAGGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKQNQET*DLEAAH
Trigger: GTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTG...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATGTCCTTCAAGACATTaGTATCCAGACTGGATTCGT +
Preference number: 4 (lower is better)
Translates to: KNAREEAVEIRACPSHNKCPSRH*YPDWIR
Trigger: ACGAATCCAGTCTGGATATCAATGTCTTGAAGGACA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATAAGGCATGGTCACTCTaGTCCTGGGCACGATCGTGC +
Preference number: 4 (lower is better)
Translates to: RCIDTTIKKTQLKSLRFNKAWSL*SWARSC
Trigger: GCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTT...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGGTCAGCTGCTTGGTCTaGAGTTCAAACCCTTCGACC +
Preference number: 4 (lower is better)
Translates to: HTQFQPKKFVICQAVKALVSCLV*SSNPST
Trigger: GGTCGAAGGGTTTGAACTGCAGACCAAGCAGCTGAC...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATTTGGCTGCAGCAAGCTaGAGGGCCTGGGTCAAGCTA +
Preference number: 4 (lower is better)
Translates to: RCIDTTIKKTQLKSLRFNLAAAS*RAWVKL
Trigger: TAGCTTGACCCAGGCCCTGCAGCTTGCTGCAGCCAA...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGGTTGGCTCCCTCCCTaGTCTGGTCCCTCATATTCT +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKGWLPP*SGPSYS
Trigger: AGAATATGAGGGACCAGAGCAGGGAGGGAGCCAACC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACCTACATCCGCCTCGTaGGATACCGACAGTACCTTG +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKPTSAS*DTDSTL
Trigger: CAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGG...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGACTCGGGTCAGCTGCTTaGTCTGCAGTTCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: LLLLQRHHFCSIEVCSRRLGSAA*SAVQTL
Trigger: AAGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAG...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATCTTCTCATCTCGAATaGTTTGCAGCTCACCTTTCA +
Preference number: 4 (lower is better)
Translates to: NAREEAVEIRACPSHNKRSSHLE*FAAHLS
Trigger: TGAAAGGTGAGCTGCAAACCATTCGAGATGAGAAGA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACGCTCCTTCAGCTTCTaGATGGCCAGCTGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKRSFSF*MASWSF
Trigger: GAAAGACCAGCTGGCCATCCAGAAGCTGAAGGAGCG...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACATCCAGGGTCACCTaGCTTTTCCTAGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKTSRVT*LFLAAT
Trigger: GGTTGCAGCTAGGAAAAGCCAGGTGACCCTGGATGT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACTTGTAAGACTGGCTaGGGTATCCAAGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKTCKTG*GIQASG
Trigger: GCCACTAGCTTGGATACCGCAGCCAGTCTTACAAGT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACCCCGCTCTTCCTCTaGCTTTTTATTGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKTPLFL*LFIGIL
Trigger: GAGGATGCCAATAAAAAGGCAGAGGAAGAGCGGGGT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGATCTGCTATCTGCTCTTaGAGCACCTTCAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLLLQRHHFCSIEVCSRRSAICS*STFKSP
Trigger: GGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGA...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGCGGGCTTTGGTTTCTaGTATCTGCTCTTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKAGFGF*YLLLQH
Trigger: GTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CAGCAACCACAGGATATCTTCTCAGAGGGAGCAAGACAAAGAAATGAAGGAAGTGTCTTCCTCATTTCTTaGTGCAATTGGGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QQPQDIFSEGARQRNEGSVFLIS*CNWAWK
Trigger: TTTCCAGGCCCAATTGCAGCAAGAAATGAGGAAGAC...ACTTCCTTCATTTCTTTGTCTTGCTCCCTCTGAGAAGATATCCTGTGGTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATGGCTTTCTCGTAGGTaGCCAGCAGTTCAGATACCT +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKWLSRR*PAVQIP
Trigger: AGGTATCTGAACTGCTGGGCACCTACGAGAAAGCCA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGCCACAGAACGTAGTTaGTCCAGCTCCAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKATERS*SSSKSF
Trigger: GAAGGACTTGGAGCTGGAGCAACTACGTTCTGTGGC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGATACCTCAGAGATCTaGCTCTCCAGGGCTGCTACT +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKDTSEI*LSRAAT
Trigger: AGTAGCAGCCCTGGAGAGCCAGATCTCTGAGGTATC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTCCTGTAGTAGCTTCTTaGGCTTCTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QVGQMLTVKEYIHSYCICPVVAS*ASPSCP
Trigger: AGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGG...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTGCCACAGAACGTAGTTaGTCCAGCTCCAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QLKSLRFNDHCYYYKDITATERS*SSSKSF
Trigger: GAAGGACTTGGAGCTGGAGCAACTACGTTCTGTGGC...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATCCAGCCTGTGTTTCTaGTTCCTCAGAGATGTGATC +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKSSLCF*FLRDVI
Trigger: GATCACATCTCTGAGGAAGCAGAAACACAGGCTGGA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGACTGCCAAGGCTTCTCTaGTCTCTTCTAAGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLLLQRHHFCSIEVCSRRLPRLL*SLLSEV
Trigger: AACTTCGCTTAGAAGAGACCAGAGAAGCCTTGGCAG...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CAAGTGGGCCAGATGCTGACTGTGAAGGAATACATACATAGTTACTGTATATGTTGCTGCAATTGGGCCTaGAAATGGCTTTTAAGACGG +
Preference number: 4 (lower is better)
Translates to: QVGQMLTVKEYIHSYCICCCNWA*KWLLRR
Trigger: CCGTCTTAAAAGCCATTTCCAGGCCCAATTGCAGCA...ACATATACAGTAACTATGTATGTATTCCTTCACAGTCAGCATCTGGCCCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTTTTTCGATGTGGCTCTaGAGGGCTCCAACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QLKSLRFNDHCYYYKDITFSMWL*RAPTSS
Trigger: AGAGGAGGTTGGAGCCCTCCAGAGCCACATCGAAAA...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR TCA 90 bp AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATTGGTGTTCTTGCTTTTaGGCACAACTTGGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: RCIDTTIKKTQLKSLRFNWCSCF*AQLGLA
Trigger: TGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCA...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATGGTACTGGAGAAGCTaGTTTTTCTGTGTCTCGATG +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKWYWRS*FFCVSM
Trigger: CATCGAGACACAGAAAAAGCAGCTTCTCCAGTACCA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATTGGTTTCTGCTATCTaGTCTTGCAGCACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKLVSAI*SCSTFK
Trigger: CTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAGTCTTCCTCATTTCTTaGTGCAATTGGGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKVFLIS*CNWAWK
Trigger: TTTCCAGGCCCAATTGCAGCAAGAAATGAGGAAGAC...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp TTGTTATTACTACAAAGACATCACTTCTGTTCCATTGAAGTCTGCTCCCGCAGAAGTCTTGCCTGGTACTaGAGAAGCTGCTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLLLQRHHFCSIEVCSRRSLAWY*RSCFFC
Trigger: ACAGAAAAAGCAGCTTCTCCAGTACCAGGCAAGACT...TCTGCGGGAGCAGACTTCAATGGAACAGAAGTGATGTCTTTGTAGTAATAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATCCTTGAGTCTTGCCTaGTACTGGAGAAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKSLSLA*YWRSCF
Trigger: AAAGCAGCTTCTCCAGTACCAGGCAAGACTCAAGGA...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAACCTCTGCCTTTTTATTaGCATCCTCTAAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKPLPFY*HPLSPA
Trigger: AGCAGGACTTAGAGGATGCCAATAAAAAGGCAGAGG...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATGCTGCAATTGGGCCTaGAAATGGCTTTTAAGACGG +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKCCNWA*KWLLRR
Trigger: CCGTCTTAAAAGCCATTTCCAGGCCCAATTGCAGCA...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCATTTCTTGCTGCAATTaGGCCTGGAAATGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: CHLFYKLHVEGKTMKSSLISCCN*AWKWLL
Trigger: TAAAAGCCATTTCCAGGCCCAATTGCAGCAAGAAAT...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAACATAAAGAAAGAAGGTaGGCTCGTTGGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKHKERR*ARWLQQ
Trigger: TTGCTGCAGCCAACGAGCCCACCTTCTTTCTTTATG...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAATATTCTTTTCGATGTaGCTCTGGAGGGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKIFFSM*LWRAPT
Trigger: GGTTGGAGCCCTCCAGAGCCACATCGAAAAGAATAT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAAGTCTTGCCTGGTACTaGAGAAGCTGCTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKSLAWY*RSCFFC
Trigger: ACAGAAAAAGCAGCTTCTCCAGTACCAGGCAAGACT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGCATCCTCTAAGTCCTaGTTCATCTTCTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKASSKS*FIFFLS
Trigger: GGATAAGAAGAAGATGAAGCAGGACTTAGAGGATGC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR GCA 90 bp CAGCTCAAGTCACTCAGGTTTAATGACCATTGTTATTACTACAAAGACATCACTTTGGTTTCTGCTATCTaGTCTTGCAGCACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QLKSLRFNDHCYYYKDITLVSAI*SCSTFK
Trigger: CTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAA...AGTGATGTCTTTGTAGTAATAACAATGGTCATTAAACCTGAGTGACTTGAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CCA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAATTTCTTGCTGCAATTaGGCCTGGAAATGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LPTIKEARRFQELVRKQKISCCN*AWKWLL
Trigger: TAAAAGCCATTTCCAGGCCCAATTGCAGCAAGAAAT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS TCA 90 bp GGGCTCGTTGGCTGCAGCAAGCTGCAGGGCCTGGGTCAAGCTATCTaGGGAGGCTGTGTCGGCTGGGTCCCCAAGACCTCCACCACCCAC +
Preference number: 5 (lower is better)
Translates to: GLVGCSKLQGLGQAI*GGCVGWVPKTSTTH
Trigger: GTGGGTGGTGGAGGTCTTGGGGACCCAGCCGACACAGCCTCCTCAGATAGCTTGACCCAGGCCCTGCAGCTTGCTGCAGCCAACGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp AGCTGCTGCAGCCGGGCCAGTTCCTGCTTCCAGTCCTCAGCCTCCTaGTGGTGCTGGCTTTCCAGCTCCTCACAGGACAGCCGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SCCSRASSCFQSSAS*WCWLSSSSQDSRRE
Trigger: CTCCCTGCGGCTGTCCTGTGAGGAGCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp CTGAAGTCCAGCTGGCTGCGCTCCAGTTCCTGCCGATGGAGCTGCTaGAGCCGGGCCAGTTCCTGCTTCCAGTCCTCAGCCTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LKSSWLRSSSCRWSC*SRASSCFQSSASCW
Trigger: CCAGCAGGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGAGCGCAGCCAGCTGGACTTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp TCCCTGAAGTCCAGCTGGCTGCGCTCCAGTTCCTGCCGATGGAGCTaGTGCAGCCGGGCCAGTTCCTGCTTCCAGTCCTCAGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SLKSSWLRSSSCRWS*CSRASSCFQSSASC
Trigger: GCAGGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGAGCGCAGCCAGCTGGACTTCAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp AGCTCCAAGTCCTTCTCCGCGAGCACAGCCAGGGCCCGGTCCCGCTaGTTGTGTAGCTCCTCCTCCAGTTTCAGTGTGCGGTCCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SSKSFSASTARARSR*LCSSSSSFSVRSLK
Trigger: CTTCAGGGACCGCACACTGAAACTGGAGGAGGAGCTACACAAGCAGCGGGACCGGGCCCTGGCTGTGCTCGCGGAGAAGGACTTGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp CTTCTGCGTCCTGGCAACCCAGAGGACAAGGCCACAGAACGTAGTTaGTCCAGCTCCAAGTCCTTCTCCGCGAGCACAGCCAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: LLRPGNPEDKATERS*SSSKSFSASTARAR
Trigger: CCGGGCCCTGGCTGTGCTCGCGGAGAAGGACTTGGAGCTGGAGCAACTACGTTCTGTGGCCTTGTCCTCTGGGTTGCCAGGACGCAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CTCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTAAGACGGGCAGCCTCTaGCTGAAGCTCCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: LTWLLGTLSGMGTKGSAGKTGSL*LKLLQP
Trigger: CGGCTGCAGGAGCTTCAGCAAGAGGCTGCCCGTCTT...ACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS TCA 90 bp AGTTCCAGGTCCTGGCGCTGGGTCCTCTCCTCCTGCAAGAGCTTCTaGAGCTCGCGCAGCATCAAGGCATGGTCACTCTGCTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SSRSWRWVLSSCKSF*SSRSIKAWSLCSWA
Trigger: TGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCGCGAGCTTCAGAAGCTCTTGCAGGAGGAGAGGACCCAGCGCCAGGACCTGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS-3UTR CAA 90 bp ACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCCTGCTTCAGCTCCTGTaGGTAGTAGAGCGCGGTAGC +
Preference number: 5 (lower is better)
Translates to: TWLLGTLSGMGTKGSAGSLLQLL*VVERGS
Trigger: GCTACCGCGCTCTACTACCAACAGGAGCTGAAGCAG...GGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS GCA 90 bp CGGCTAGAGGCTGCGAGGGCCAGTGTCTTGTTCTCCAGGTCCAGCTaGAGAAGTCGCTCCTTCAGCTTCTGGATGGCCAGCTGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: RLEAARASVLFSRSS*RSRSFSFWMASWSF
Trigger: GAAAGACCAGCTGGCCATCCAGAAGCTGAAGGAGCGACTTCTGCAGCTGGACCTGGAGAACAAGACACTGGCCCTCGCAGCCTCTAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp ACTGGATTCGTCGCCATGGATGTCAAGGGAGGACCGGCTAGAGGCTaGGAGGGCCAGTGTCTTGTTCTCCAGGTCCAGCTGCAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: TGFVAMDVKGGPARG*EGQCLVLQVQLQKS
Trigger: CGACTTCTGCAGCTGGACCTGGAGAACAAGACACTGGCCCTCGCAGCCTCTAGCCGGTCCTCCCTTGACATCCATGGCGACGAATCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp CCGCTTGGGAGCCGCATTAGCACTTGTTTCTCTTCAGGACTGAAGTaGAAGATCGTGAGGATGGCGGTGAGCGTCTGCTGGCGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PLGSRISTCFSSGLK*KIVRMAVSVCWRPR
Trigger: CCTGGGCCGCCAGCAGACGCTCACCGCCATCCTCACGATCTTGCACTTCAGTCCTGAAGAGAAACAAGTGCTAATGCGGCTCCCAAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 90 bp GTGAGACCTGGAGGCTGCACACCTGAGAGGCCTACATCCGCCTCGTaGGATACCGACAGTACCTTGATGCTGGCCTCCAGGGCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: VRPGGCTPERPTSAS*DTDSTLMLASRASF
Trigger: GAAAGAAGCCCTGGAGGCCAGCATCAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 90 bp CTTCGACCTGATCAGCGGCATATGCCCGCCCTGCCAAGGCTTCTCTaGTCTCTTCTAAGCGAAGTTCCAGGTCCTGGCGCTGGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LRPDQRHMPALPRLL*SLLSEVPGPGAGSS
Trigger: AGAGGACCCAGCGCCAGGACCTGGAACTTCGCTTAGAAGAGACCAGAGAAGCCTTGGCAGGGCGGGCATATGCCGCTGATCAGGTCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS-3UTR CAA 90 bp CTCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCTCGGGTCAGCTGCTaGGTCTGCAGTTCAAACCCT +
Preference number: 5 (lower is better)
Translates to: LTWLLGTLSGMGTKGSAGSRVSC*VCSSNP
Trigger: AGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAGA...ACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS TCA 90 bp CCTCACTGTGAGTGGAGCACCGGTCATCCACAGAATCAGGAAACGTaGGACCTGGAGGCTGCACACCTGAGAGGCCTACATCCGCCTCGT +
Preference number: 5 (lower is better)
Translates to: PHCEWSTGHPQNQET*DLEAAHLRGLHPPR
Trigger: ACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTGTGGATGACCGGTGCTCCACTCACAGTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS TCA 90 bp ACCTCTCGGGTCAGCTGCTTGGTCTGCAGTTCAAACCCTTCGACCTaGTCAGCGGCATATGCCCGCCCTGCCAAGGCTTCTCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: TSRVSCLVCSSNPST*SAAYARPAKASLVS
Trigger: AGAGACCAGAGAAGCCTTGGCAGGGCGGGCATATGCCGCTGATCAGGTCGAAGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS TCA 90 bp TCAGAGATCTGGCTCTCCAGGGCTGCTACTCTCTGCTCTTCTACCTaGGACTGCTGGCGGAGCTGGTCCTCTGCAAGGGCTGTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SEIWLSRAATLCSST*DCWRSWSSARAVFL
Trigger: GAGGAAGACAGCCCTTGCAGAGGACCAGCTCCGCCAGCAGTCTCAGGTAGAAGAGCAGAGAGTAGCAGCCCTGGAGAGCCAGATCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp GAGCACCGGTCATCCACAGAATCAGGAAACGTGAGACCTGGAGGCTaGACACCTGAGAGGCCTACATCCGCCTCGTGGGATACCGACAGT +
Preference number: 5 (lower is better)
Translates to: EHRSSTESGNVRPGG*TPERPTSASWDTDS
Trigger: ACTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTGTGGATGACCGGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp GGTGCCCAGCAGTTCAGATACCTCAGAGATCTGGCTCTCCAGGGCTaGTACTCTCTGCTCTTCTACCTGAGACTGCTGGCGGAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: GAQQFRYLRDLALQG*YSLLFYLRLLAELV
Trigger: GACCAGCTCCGCCAGCAGTCTCAGGTAGAAGAGCAGAGAGTAGCAGCCCTGGAGAGCCAGATCTCTGAGGTATCTGAACTGCTGGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp ACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCAGAGATCCTTCTTACTaGGGCCGCCCCCGAAATTCA +
Preference number: 5 (lower is better)
Translates to: TWLLGTLSGMGTKGSAGSRDPSY*GRPRNS
Trigger: TGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTCT...GGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp TCACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCGCAGGGAGATATACTaGTCCTTCAGCTCTGCGAGC +
Preference number: 5 (lower is better)
Translates to: SHGCSGPSLGWAQRAQLVRREIY*SFSSAS
Trigger: GCTCGCAGAGCTGAAGGACAAGTATATCTCCCTGCG...AACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS GCA 90 bp CGATCGTGCTGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTaGTCTTGCAGCACCTTCAAGTCTCCCTCCAGGCGACCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: RSCCCVMRRALVSAI*SCSTFKSPSRRPRS
Trigger: AGAGCGGGGTCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS GCA 90 bp CTGGGCACGATCGTGCTGCTGTGTAATGAGGCGGGCTTTGGTTTCTaGTATCTGCTCTTGCAGCACCTTCAAGTCTCCCTCCAGGCGACC +
Preference number: 5 (lower is better)
Translates to: LGTIVLLCNEAGFGF*YLLLQHLQVSLQAT
Trigger: GGTCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS CCA 90 bp TCTCCACCTCCTTGCGGGCCAACTGCTCAGCATAAAGAAAGAAGGTaGGCTCGTTGGCTGCAGCAAGCTGCAGGGCCTGGGTCAAGCTAT +
Preference number: 5 (lower is better)
Translates to: SPPPCGPTAQHKERR*ARWLQQAAGPGSSY
Trigger: ATAGCTTGACCCAGGCCCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCTTTCTTTATGCTGAGCAGTTGGCCCGCAAGGAGGTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp ACCATTTCCCTAACTCGCACCTCCTACCCCCAGCCTTTCTCCCTAACCTGCTCCTCAGCAGCCTCGGAGTaGGCCATTATCTCAGGGTCG +
Preference number: 5 (lower is better)
Translates to: TISLTRTSYPQPFSLTCSSAASE*AIISGS
Trigger: CGACCCTGAGATAATGGCCAACTCCGAGGCTGCTGA...GGAGCAGGTTAGGGAGAAAGGCTGGGGGTAGGAGGTGCGAGTTAGGGAAATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS TCA 90 bp GCTGCGGTATCCAAGCTAGTGGCAGTTCCGGTGCTGTCCTCACTGTaGGTGGAGCACCGGTCATCCACAGAATCAGGAAACGTGAGACCT +
Preference number: 5 (lower is better)
Translates to: AAVSKLVAVPVLSSL*VEHRSSTESGNVRP
Trigger: AGGTCTCACGTTTCCTGATTCTGTGGATGACCGGTGCTCCACTCACAGTGAGGACAGCACCGGAACTGCCACTAGCTTGGATACCGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp TGCTGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTGCTCTTaGAGCACCTTCAAGTCTCCCTCCAGGCGACCCCGCTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: CCCVMRRALVSAICS*STFKSPSRRPRSSS
Trigger: AGAGGAAGAGCGGGGTCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS GCA 90 bp CGCAGCATCAAGGCATGGTCACTCTGCTCCTGGGCACGATCGTGCTaGTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: RSIKAWSLCSWARSC*CVMRRALVSAICSC
Trigger: GCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS GCA 90 bp TCGCGCAGCATCAAGGCATGGTCACTCTGCTCCTGGGCACGATCGTaGTGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SRSIKAWSLCSWARS*CCVMRRALVSAICS
Trigger: AGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS TCA 90 bp CACCTGAGAGGCCTACATCCGCCTCGTGGGATACCGACAGTACCTTaGTGCTGGCCTCCAGGGCTTCTTTCTCCTTCAGCAGGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: HLRGLHPPRGIPTVP*CWPPGLLSPSAGFY
Trigger: ATAAAAGCCTGCTGAAGGAGAAAGAAGCCCTGGAGGCCAGCATCAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS TCA 90 bp GTCATCCACAGAATCAGGAAACGTGAGACCTGGAGGCTGCACACCTaGGAGGCCTACATCCGCCTCGTGGGATACCGACAGTACCTTGAT +
Preference number: 5 (lower is better)
Translates to: VIHRIRKRETWRLHT*EAYIRLVGYRQYLD
Trigger: ATCAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTGTGGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 90 bp TTTAAGACGGGCAGCCTCTTGCTGAAGCTCCTGCAGCCGGGGGTCTaGTCGGTTCTTCTCATCTCGAATGGTTTGCAGCTCACCTTTCAG +
Preference number: 5 (lower is better)
Translates to: FKTGSLLLKLLQPGV*SVLLISNGLQLTFQ
Trigger: CTGAAAGGTGAGCTGCAAACCATTCGAGATGAGAAGAACCGACCAGACCCCCGGCTGCAGGAGCTTCAGCAAGAGGCTGCCCGTCTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS-3UTR CAA 90 bp ACCATTTCCCTAACTCGCACCTCCTACCCCCAGCCTTTCTCCCTAACCTGCTCCCCCAGGCTCCCATCTTaGGTGTTCTTGCTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: TISLTRTSYPQPFSLTCSPRLPS*VFLLLS
Trigger: GCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGG...GGAGCAGGTTAGGGAGAAAGGCTGGGGGTAGGAGGTGCGAGTTAGGGAAATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAGCCCGGTCCCGCTGCTaGTGTAGCTCCTCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: KNAREEAVEIRACPSHNKARSRC*CSSSSS
Trigger: ACTGGAGGAGGAGCTACACAAGCAGCGGGACCGGGC...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 90 bp ATCTTGTCCTTCAAGACATTGATATCCAGACTGGATTCGTCGCCATaGATGTCAAGGGAGGACCGGCTAGAGGCTGCGAGGGCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: ILSFKTLISRLDSSP*MSREDRLEAARASV
Trigger: GACACTGGCCCTCGCAGCCTCTAGCCGGTCCTCCCTTGACATCCATGGCGACGAATCCAGTCTGGATATCAATGTCTTGAAGGACAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAAGACGGGCAGCCTCTaGCTGAAGCTCCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: KNAREEAVEIRACPSHNKKTGSL*LKLLQP
Trigger: CGGCTGCAGGAGCTTCAGCAAGAGGCTGCCCGTCTT...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp ACATGGCTGCTCGGGACCCTCTCTGGGATGGGCACAAAGGGCTCAGCTGGTTCCTTGTCCTTCAAGACATaGATATCCAGACTGGATTCG +
Preference number: 5 (lower is better)
Translates to: TWLLGTLSGMGTKGSAGSLSFKT*ISRLDS
Trigger: CGAATCCAGTCTGGATATCAATGTCTTGAAGGACAA...GGAACCAGCTGAGCCCTTTGTGCCCATCCCAGAGAGGGTCCCGAGCAGCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS CCA 90 bp GAAGTCGCTCCTTCAGCTTCTGGATGGCCAGCTGGTCTTTCTGCTTaGCTTTCTCGTAGGTGCCCAGCAGTTCAGATACCTCAGAGATCT +
Preference number: 5 (lower is better)
Translates to: EVAPSASGWPAGLSA*LSRRCPAVQIPQRS
Trigger: AGATCTCTGAGGTATCTGAACTGCTGGGCACCTACGAGAAAGCCAAGCAGAAAGACCAGCTGGCCATCCAGAAGCTGAAGGAGCGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 90 bp GCCATTATCTCAGGGTCGCAGAGCTTCTCCACATCCAGGGTCACCTaGCTTTTCCTAGCTGCAACCTGTAGTAGCTTCTTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: AIISGSQSFSTSRVT*LFLAATCSSFLSFS
Trigger: GGAGAAGCTCAAGAAGCTACTACAGGTTGCAGCTAGGAAAAGCCAGGTGACCCTGGATGTGGAGAAGCTCTGCGACCCTGAGATAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAATGGCCTCTTCAGACTTaGGGGGAAGTGGTCCACGGG +
Preference number: 5 (lower is better)
Translates to: KNAREEAVEIRACPSHNKWPLQT*GEVVHG
Trigger: CCCGTGGACCACTTCCCCCAAAGTCTGAAGAGGCCA...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAGAAGGTGGGCTCGTaGGCTGCAGCAAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NKNAREEAVEIRACPSHNKKVGS*AAASCR
Trigger: CCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCTT...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 90 bp GTCATCTTCAACCCCAAATTCACCCTTGACACTTGTAAGACTGGCTaGGGTATCCAAGCTAGTGGCAGTTCCGGTGCTGTCCTCACTGTG +
Preference number: 5 (lower is better)
Translates to: VIFNPKFTLDTCKTG*GIQASGSSGAVLTV
Trigger: CACAGTGAGGACAGCACCGGAACTGCCACTAGCTTGGATACCGCAGCCAGTCTTACAAGTGTCAAGGGTGAATTTGGGGTTGAAGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATGCACGCACCACATCCTaGAGTCTTGCCTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: NKNAREEAVEIRACPSHNARTTS*SLAWYW
Trigger: CCAGTACCAGGCAAGACTCAAGGATGTGGTGCGTGC...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATGATACCGACAGTACCTaGATGCTGGCCTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: NKNAREEAVEIRACPSHNDTDST*MLASRA
Trigger: AGCCCTGGAGGCCAGCATCAAGGTACTGTCGGTATC...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp ACCATTTCCCTAACTCGCACCTCCTACCCCCAGCCTTTCTCCCTAACCTGCTCCCATTTCTTGCTGCAATaGGGCCTGGAAATGGCTTTT +
Preference number: 5 (lower is better)
Translates to: TISLTRTSYPQPFSLTCSHFLLQ*GLEMAF
Trigger: AAAAGCCATTTCCAGGCCCAATTGCAGCAAGAAATG...GGAGCAGGTTAGGGAGAAAGGCTGGGGGTAGGAGGTGCGAGTTAGGGAAATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATCAGCAGCCTCGGAGTaGGCCATTATCTCAGGGTCG +
Preference number: 5 (lower is better)
Translates to: NAREEAVEIRACPSHNKRSAASE*AIISGS
Trigger: CGACCCTGAGATAATGGCCAACTCCGAGGCTGCTGA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAACGCAGGGAGATATACTaGTCCTTCAGCTCTGCGAGC +
Preference number: 5 (lower is better)
Translates to: KNAREEAVEIRACPSHNKRREIY*SFSSAS
Trigger: GCTCGCAGAGCTGAAGGACAAGTATATCTCCCTGCG...TTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 90 bp TTCCCCAGGCTCCCATCTTTGGTGTTCTTGCTTTTGAGCACAACTTaGGCTCGCATCTTATACCGCTCAAACTCTTCCTTCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: FPRLPSLVFLLLSTT*ARILYRSNSSFSCF
Trigger: GAAGCAGCTGAAGGAAGAGTTTGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCCCAGGCTCCCATCTTaGGTGTTCTTGCTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: NKNAREEAVEIRACPSHNPRLPS*VFLLLS
Trigger: GCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTGGCCTCTTCAGACTTaGGGGGAAGTGGTCCACGGG +
Preference number: 5 (lower is better)
Translates to: HTQFQPKKFVICQAVKALWPLQT*GEVVHG
Trigger: CCCGTGGACCACTTCCCCCAAAGTCTGAAGAGGCCA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATGTAATGAGGCGGGCTTaGGTTTCTGCTATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: NKNAREEAVEIRACPSHNVMRRA*VSAICS
Trigger: AGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTAC...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATGCCCGGTCCCGCTGCTaGTGTAGCTCCTCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RCIDTTIKKTQLKSLRFNARSRC*CSSSSS
Trigger: ACTGGAGGAGGAGCTACACAAGCAGCGGGACCGGGC...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAAGAAGGTGGGCTCGTaGGCTGCAGCAAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKKKVGS*AAASCR
Trigger: CCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCTT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACACCCCAAATTCACCCTaGACACTTGTAAGACTGGCT +
Preference number: 5 (lower is better)
Translates to: INKNAREEAVEIRACPSHTPNSP*TLVRLA
Trigger: AGCCAGTCTTACAAGTGTCAAGGGTGAATTTGGGGT...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGATCCTCTGCCTTTTTATaGGCATCCTCTAAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: NAREEAVEIRACPSHNKRSSAFL*ASSKSC
Trigger: GCAGGACTTAGAGGATGCCAATAAAAAGGCAGAGGA...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CTCTGCTTTTCCTGGGAGGGTCCTAACAGTGTTCTGGAATCTGCAGCAAATTACTCCTCTGCCTTTTTATaGGCATCCTCTAAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LCFSWEGPNSVLESAANYSSAFL*ASSKSC
Trigger: GCAGGACTTAGAGGATGCCAATAAAAAGGCAGAGGA...GTAATTTGCTGCAGATTCCAGAACACTGTTAGGACCCTCCCAGGAAAAGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACACCTGTAGTAGCTTCTaGAGCTTCTCCATCTTGTCC +
Preference number: 5 (lower is better)
Translates to: INKNAREEAVEIRACPSHTCSSF*SFSILS
Trigger: GGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGT...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAACTGCTTCAGCTCCTGTaGGTAGTAGAGCGCGGTAGC +
Preference number: 5 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKLLQLL*VVERGS
Trigger: GCTACCGCGCTCTACTACCAACAGGAGCTGAAGCAG...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGCACGCACCACATCCTaGAGTCTTGCCTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: LPTIKEARRFQELVRKQKARTTS*SLAWYW
Trigger: CCAGTACCAGGCAAGACTCAAGGATGTGGTGCGTGC...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCCTCATCTCGAATGGTTaGCAGCTCACCTTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: CHLFYKLHVEGKTMKSSLLISNG*QLTFQL
Trigger: GAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGAG...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCATTTCTTGCTGCAATaGGGCCTGGAAATGGCTTTT +
Preference number: 5 (lower is better)
Translates to: NKNAREEAVEIRACPSHNHFLLQ*GLEMAF
Trigger: AAAAGCCATTTCCAGGCCCAATTGCAGCAAGAAATG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATCCATCTTTGGTGTTCTaGCTTTTGAGCACAACTTGG +
Preference number: 5 (lower is better)
Translates to: NKNAREEAVEIRACPSHNPSLVF*LLSTTW
Trigger: CCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGG...ATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACAATAAAAGACCATCTTTGGTGTTCTaGCTTTTGAGCACAACTTGG +
Preference number: 5 (lower is better)
Translates to: NAREEAVEIRACPSHNKRPSLVF*LLSTTW
Trigger: CCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGG...TCTTTTATTGTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAGAGATCCTTCTTACTaGGGCCGCCCCCGAAATTCA +
Preference number: 5 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKRDPSY*GRPRNS
Trigger: TGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTCT...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATCTCGGGTCAGCTGCTaGGTCTGCAGTTCAAACCCT +
Preference number: 5 (lower is better)
Translates to: LPTIKEARRFQELVRKQKSRVSC*VCSSNP
Trigger: AGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAGA...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTTGTCCTTCAAGACATaGATATCCAGACTGGATTCG +
Preference number: 5 (lower is better)
Translates to: INKNAREEAVEIRACPSHLSFKT*ISRLDS
Trigger: CGAATCCAGTCTGGATATCAATGTCTTGAAGGACAA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAATTCTGCTATCTGCTCTaGCAGCACCTTCAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKFCYLL*QHLQVS
Trigger: GGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAA...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTTCTGCTATCTGCTCTaGCAGCACCTTCAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: HTQFQPKKFVICQAVKALFCYLL*QHLQVS
Trigger: GGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CCTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAACTCATCTCGAATGGTTaGCAGCTCACCTTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: PSHNKRGTEISGVGKKTKLISNG*QLTFQL
Trigger: GAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGAG...TTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp ATAAATAAGAATGCAAGAGAAGAGGCCGTAGAAATCCGAGCCTGCCCTTCCCACTTGAGCTTCTCCATCTaGTCCTTCAAGACATTGATA +
Preference number: 5 (lower is better)
Translates to: INKNAREEAVEIRACPSHLSFSI*SFKTLI
Trigger: TATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAA...GTGGGAAGGGCAGGCTCGGATTTCTACGGCCTCTTCTCTTGCATTCTTATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGTGTCTTCCTCATTTCTaGCTGCAATTGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HTQFQPKKFVICQAVKALCLPHF*LQLGLE
Trigger: TTCCAGGCCCAATTGCAGCAAGAAATGAGGAAGACA...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CACACACAATTCCAACCTAAGAAATTTGTTATCTGTCAGGCAGTTAAAGCCCTGACCTGTAGTAGCTTCTaGAGCTTCTCCATCTTGTCC +
Preference number: 5 (lower is better)
Translates to: HTQFQPKKFVICQAVKALTCSSF*SFSILS
Trigger: GGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGT...CAGGGCTTTAACTGCCTGACAGATAACAAATTTCTTAGGTTGGAATTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAAACCCCAAATTCACCCTaGACACTTGTAAGACTGGCT +
Preference number: 5 (lower is better)
Translates to: LPTIKEARRFQELVRKQKTPNSP*TLVRLA
Trigger: AGCCAGTCTTACAAGTGTCAAGGGTGAATTTGGGGT...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp AGATGTATAGACACCACCATTAAGAAAACACAGCTCAAGTCACTCAGGTTTAATGTAATGAGGCGGGCTTaGGTTTCTGCTATCTGCTCT +
Preference number: 5 (lower is better)
Translates to: RCIDTTIKKTQLKSLRFNVMRRA*VSAICS
Trigger: AGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTAC...ATTAAACCTGAGTGACTTGAGCTGTGTTTTCTTAATGGTGGTGTCTATACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp CTTCCCACAATAAAAGAGGCACGGAGATTTCAGGAGTTGGTAAGAAAACAAAAATGTCTTCCTCATTTCTaGCTGCAATTGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LPTIKEARRFQELVRKQKCLPHF*LQLGLE
Trigger: TTCCAGGCCCAATTGCAGCAAGAAATGAGGAAGACA...TTTTTGTTTTCTTACCAACTCCTGAAATCTCCGTGCCTCTTTTATTGTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS-3UTR CAA 90 bp TGTCATCTCTTCTACAAGCTCCATGTTGAAGGGAAGACCATGAAGTCATCACTCTTGAGCTTCTCCATCTaGTCCTTCAAGACATTGATA +
Preference number: 5 (lower is better)
Translates to: CHLFYKLHVEGKTMKSSLLSFSI*SFKTLI
Trigger: TATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAA...GAGTGATGACTTCATGGTCTTCCCTTCAACATGGAGCTTGTAGAAGAGATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090511.4
CDS GCA 72 bp AGCTGGCTGCGCTCCAGTTCCTGCCGATGGAGCTGCTaGAGCCGGGCCAGTTCCTGCTTCCAGTCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SWLRSSSCRWSC*SRASSCFQSSA
Trigger: GGCTGAGGACTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGAGCGCAGCCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 72 bp AAGTGCAAGATCGTGAGGATGGCGGTGAGCGTCTGCTaGCGGCCCAGGCTGTCGGGCAGGGTCAGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: KCKIVRMAVSVC*RPRLSGRVRKR
Trigger: CCGCTTCCTGACCCTGCCCGACAGCCTGGGCCGCCAGCAGACGCTCACCGCCATCCTCACGATCTTGCACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp TCCAGCTGGCTGCGCTCCAGTTCCTGCCGATGGAGCTaGTGCAGCCGGGCCAGTTCCTGCTTCCAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SSWLRSSSCRWS*CSRASSCFQSS
Trigger: TGAGGACTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGAGCGCAGCCAGCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp TCCTTCTCCGCGAGCACAGCCAGGGCCCGGTCCCGCTaGTTGTGTAGCTCCTCCTCCAGTTTCAGTGTGCGG +
Preference number: 6 (lower is better)
Translates to: SFSASTARARSR*LCSSSSSFSVR
Trigger: CCGCACACTGAAACTGGAGGAGGAGCTACACAAGCAGCGGGACCGGGCCCTGGCTGTGCTCGCGGAGAAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp CTGAAGTGCAAGATCGTGAGGATGGCGGTGAGCGTCTaGTGGCGGCCCAGGCTGTCGGGCAGGGTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LKCKIVRMAVSV*WRPRLSGRVRK
Trigger: CTTCCTGACCCTGCCCGACAGCCTGGGCCGCCAGCAGACGCTCACCGCCATCCTCACGATCTTGCACTTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 72 bp CTGAAGTCCAGCTGGCTGCGCTCCAGTTCCTGCCGATaGAGCTGCTGCAGCCGGGCCAGTTCCTGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: LKSSWLRSSSCR*SCCSRASSCFQ
Trigger: CTGGAAGCAGGAACTGGCCCGGCTGCAGCAGCTCCATCGGCAGGAACTGGAGCGCAGCCAGCTGGACTTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp GCCAGTTCCTGCTTCCAGTCCTCAGCCTCCTGCTGGTaGTGGCTTTCCAGCTCCTCACAGGACAGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: ASSCFQSSASCW*WLSSSSQDSRR
Trigger: CCTGCGGCTGTCCTGTGAGGAGCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGACTGGAAGCAGGAACTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp AGCCGGGCCAGTTCCTGCTTCCAGTCCTCAGCCTCCTaGTGGTGCTGGCTTTCCAGCTCCTCACAGGACAGC +
Preference number: 6 (lower is better)
Translates to: SRASSCFQSSAS*WCWLSSSSQDS
Trigger: GCTGTCCTGTGAGGAGCTGGAAAGCCAGCACCAGCAGGAGGCTGAGGACTGGAAGCAGGAACTGGCCCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp GTCGCCATGGATGTCAAGGGAGGACCGGCTAGAGGCTaGGAGGGCCAGTGTCTTGTTCTCCAGGTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: VAMDVKGGPARG*EGQCLVLQVQL
Trigger: CAGCTGGACCTGGAGAACAAGACACTGGCCCTCGCAGCCTCTAGCCGGTCCTCCCTTGACATCCATGGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 72 bp GGAGGCTGCACACCTGAGAGGCCTACATCCGCCTCGTaGGATACCGACAGTACCTTGATGCTGGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GGCTPERPTSAS*DTDSTLMLASR
Trigger: CCTGGAGGCCAGCATCAAGGTACTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS TCA 72 bp TCCTGGCGCTGGGTCCTCTCCTCCTGCAAGAGCTTCTaGAGCTCGCGCAGCATCAAGGCATGGTCACTCTGC +
Preference number: 6 (lower is better)
Translates to: SWRWVLSSCKSF*SSRSIKAWSLC
Trigger: GCAGAGTGACCATGCCTTGATGCTGCGCGAGCTTCAGAAGCTCTTGCAGGAGGAGAGGACCCAGCGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS GCA 72 bp GCTGCGAGGGCCAGTGTCTTGTTCTCCAGGTCCAGCTaGAGAAGTCGCTCCTTCAGCTTCTGGATGGCCAGC +
Preference number: 6 (lower is better)
Translates to: AARASVLFSRSS*RSRSFSFWMAS
Trigger: GCTGGCCATCCAGAAGCTGAAGGAGCGACTTCTGCAGCTGGACCTGGAGAACAAGACACTGGCCCTCGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 72 bp AGCTCGCGCAGCATCAAGGCATGGTCACTCTGCTCCTaGGCACGATCGTGCTGCTGTGTAATGAGGCGGGCT +
Preference number: 6 (lower is better)
Translates to: SSRSIKAWSLCS*ARSCCCVMRRA
Trigger: AGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTTGATGCTGCGCGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS CAA 90 bp TGCTGGCTTTCCAGCTCCTCACAGGACAGCCGCAGGGAGATATACTaGTCCTTCAGCTCTGCGAGCTGCTCCTGTGCTGCCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: CWLSSSSQDSRREIY*SFSSASCSCAASSS
Trigger: GGAGCTGGAGGCAGCACAGGAGCAGCTCGCAGAGCTGAAGGACAAGTATATCTCCCTGCGGCTGTCCTGTGAGGAGCTGGAAAGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 72 bp GATCAGCGGCATATGCCCGCCCTGCCAAGGCTTCTCTaGTCTCTTCTAAGCGAAGTTCCAGGTCCTGGCGCT +
Preference number: 6 (lower is better)
Translates to: DQRHMPALPRLL*SLLSEVPGPGA
Trigger: AGCGCCAGGACCTGGAACTTCGCTTAGAAGAGACCAGAGAAGCCTTGGCAGGGCGGGCATATGCCGCTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS CAA 72 bp AGCGCGGTAGCCTTTTCCCCGTCAGCAGCCTCGGAGTaGGCCATTATCTCAGGGTCGCAGAGCTTCTCCACA +
Preference number: 6 (lower is better)
Translates to: SAVAFSPSAASE*AIISGSQSFST
Trigger: TGTGGAGAAGCTCTGCGACCCTGAGATAATGGCCAACTCCGAGGCTGCTGACGGGGAAAAGGCTACCGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 72 bp TCCAGCTCCTCACAGGACAGCCGCAGGGAGATATACTaGTCCTTCAGCTCTGCGAGCTGCTCCTGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SSSSQDSRREIY*SFSSASCSCAA
Trigger: GGCAGCACAGGAGCAGCTCGCAGAGCTGAAGGACAAGTATATCTCCCTGCGGCTGTCCTGTGAGGAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 90 bp GTGCTGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTGCTCTaGCAGCACCTTCAAGTCTCCCTCCAGGCGACCCCGCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: VLLCNEAGFGFCYLL*QHLQVSLQATPLFL
Trigger: GAGGAAGAGCGGGGTCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS TCA 72 bp AGAATCAGGAAACGTGAGACCTGGAGGCTGCACACCTaGGAGGCCTACATCCGCCTCGTGGGATACCGACAG +
Preference number: 6 (lower is better)
Translates to: RIRKRETWRLHT*EAYIRLVGYRQ
Trigger: CTGTCGGTATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS TCA 72 bp GTCAGCTGCTTGGTCTGCAGTTCAAACCCTTCGACCTaGTCAGCGGCATATGCCCGCCCTGCCAAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: VSCLVCSSNPST*SAAYARPAKAS
Trigger: AGAAGCCTTGGCAGGGCGGGCATATGCCGCTGATCAGGTCGAAGGGTTTGAACTGCAGACCAAGCAGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS GCA 72 bp GTAATGAGGCGGGCTTTGGTTTCTGCTATCTGCTCTTaGAGCACCTTCAAGTCTCCCTCCAGGCGACCCCGC +
Preference number: 6 (lower is better)
Translates to: VMRRALVSAICS*STFKSPSRRPR
Trigger: GCGGGGTCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS CAA 90 bp CTCTGCTCCTGGGCACGATCGTGCTGCTGTGTAATGAGGCGGGCTTaGGTTTCTGCTATCTGCTCTTGCAGCACCTTCAAGTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: LCSWARSCCCVMRRA*VSAICSCSTFKSPS
Trigger: GGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS TCA 72 bp GAGTGGAGCACCGGTCATCCACAGAATCAGGAAACGTaGGACCTGGAGGCTGCACACCTGAGAGGCCTACAT +
Preference number: 6 (lower is better)
Translates to: EWSTGHPQNQET*DLEAAHLRGLH
Trigger: ATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTGTGGATGACCGGTGCTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp TCATCCACAGAATCAGGAAACGTGAGACCTGGAGGCTaGACACCTGAGAGGCCTACATCCGCCTCGTGGGAT +
Preference number: 6 (lower is better)
Translates to: SSTESGNVRPGG*TPERPTSASWD
Trigger: ATCCCACGAGGCGGATGTAGGCCTCTCAGGTGTGCAGCCTCCAGGTCTCACGTTTCCTGATTCTGTGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp CGGGGGTCTGGTCGGTTCTTCTCATCTCGAATGGTTTaGAGCTCACCTTTCAGCTCCTCTACCTCTCGGGTC +
Preference number: 6 (lower is better)
Translates to: RGSGRFFSSRMV*SSPFSSSTSRV
Trigger: GACCCGAGAGGTAGAGGAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGAGAAGAACCGACCAGACCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS CCA 72 bp CACCTTTCAGCTCCTCTACCTCTCGGGTCAGCTGCTTaGTCTGCAGTTCAAACCCTTCGACCTGATCAGCGG +
Preference number: 6 (lower is better)
Translates to: HLSAPLPLGSAA*SAVQTLRPDQR
Trigger: CCGCTGATCAGGTCGAAGGGTTTGAACTGCAGACCAAGCAGCTGACCCGAGAGGTAGAGGAGCTGAAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS CCA 72 bp GCAGCCGGGGGTCTGGTCGGTTCTTCTCATCTCGAATaGTTTGCAGCTCACCTTTCAGCTCCTCTACCTCTC +
Preference number: 6 (lower is better)
Translates to: AAGGLVGSSHLE*FAAHLSAPLPL
Trigger: GAGAGGTAGAGGAGCTGAAAGGTGAGCTGCAAACCATTCGAGATGAGAAGAACCGACCAGACCCCCGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS CAA 72 bp CCGCTCAAACTCTTCCTTCAGCTGCTTCAGCTCCTGTaGGTAGTAGAGCGCGGTAGCCTTTTCCCCGTCAGC +
Preference number: 6 (lower is better)
Translates to: PLKLFLQLLQLL*VVERGSLFPVS
Trigger: GCTGACGGGGAAAAGGCTACCGCGCTCTACTACCAACAGGAGCTGAAGCAGCTGAAGGAAGAGTTTGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS TCA 72 bp TCCAAGCTAGTGGCAGTTCCGGTGCTGTCCTCACTGTaGGTGGAGCACCGGTCATCCACAGAATCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: SKLVAVPVLSSL*VEHRSSTESGN
Trigger: GTTTCCTGATTCTGTGGATGACCGGTGCTCCACTCACAGTGAGGACAGCACCGGAACTGCCACTAGCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp AAGGCATGGTCACTCTGCTCCTGGGCACGATCGTGCTaGTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATC +
Preference number: 6 (lower is better)
Translates to: KAWSLCSWARSC*CVMRRALVSAI
Trigger: GATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS GCA 72 bp ATCAAGGCATGGTCACTCTGCTCCTGGGCACGATCGTaGTGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCT +
Preference number: 6 (lower is better)
Translates to: IKAWSLCSWARS*CCVMRRALVSA
Trigger: AGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCAGGAGCAGAGTGACCATGCCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS GCA 72 bp CAGTTCAGATACCTCAGAGATCTGGCTCTCCAGGGCTaGTACTCTCTGCTCTTCTACCTGAGACTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: QFRYLRDLALQG*YSLLFYLRLLA
Trigger: CGCCAGCAGTCTCAGGTAGAAGAGCAGAGAGTAGCAGCCCTGGAGAGCCAGATCTCTGAGGTATCTGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 72 bp CCAACTGCTCAGCATAAAGAAAGAAGGTGGGCTCGTTaGCTGCAGCAAGCTGCAGGGCCTGGGTCAAGCTAT +
Preference number: 6 (lower is better)
Translates to: PTAQHKERRWAR*LQQAAGPGSSY
Trigger: ATAGCTTGACCCAGGCCCTGCAGCTTGCTGCAGCCAACGAGCCCACCTTCTTTCTTTATGCTGAGCAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 90 bp CATCTTATACCGCTCAAACTCTTCCTTCAGCTGCTTCAGCTCCTGTaGGTAGTAGAGCGCGGTAGCCTTTTCCCCGTCAGCAGCCTCGGA +
Preference number: 6 (lower is better)
Translates to: HLIPLKLFLQLLQLL*VVERGSLFPVSSLG
Trigger: TCCGAGGCTGCTGACGGGGAAAAGGCTACCGCGCTCTACTACCAACAGGAGCTGAAGCAGCTGAAGGAAGAGTTTGAGCGGTATAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp TGCTGTGTAATGAGGCGGGCTTTGGTTTCTGCTATCTaGTCTTGCAGCACCTTCAAGTCTCCCTCCAGGCGA +
Preference number: 6 (lower is better)
Translates to: CCVMRRALVSAI*SCSTFKSPSRR
Trigger: TCGCCTGGAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS CCA 72 bp CCTTCAGCTTCTGGATGGCCAGCTGGTCTTTCTGCTTaGCTTTCTCGTAGGTGCCCAGCAGTTCAGATACCT +
Preference number: 6 (lower is better)
Translates to: PSASGWPAGLSA*LSRRCPAVQIP
Trigger: AGGTATCTGAACTGCTGGGCACCTACGAGAAAGCCAAGCAGAAAGACCAGCTGGCCATCCAGAAGCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 72 bp TTCAAGACATTGATATCCAGACTGGATTCGTCGCCATaGATGTCAAGGGAGGACCGGCTAGAGGCTGCGAGG +
Preference number: 6 (lower is better)
Translates to: FKTLISRLDSSP*MSREDRLEAAR
Trigger: CCTCGCAGCCTCTAGCCGGTCCTCCCTTGACATCCATGGCGACGAATCCAGTCTGGATATCAATGTCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 72 bp TCAGGGTCGCAGAGCTTCTCCACATCCAGGGTCACCTaGCTTTTCCTAGCTGCAACCTGTAGTAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: SGSQSFSTSRVT*LFLAATCSSFL
Trigger: CAAGAAGCTACTACAGGTTGCAGCTAGGAAAAGCCAGGTGACCCTGGATGTGGAGAAGCTCTGCGACCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 72 bp TGGGCACGATCGTGCTGCTGTGTAATGAGGCGGGCTTaGGTTTCTGCTATCTGCTCTTGCAGCACCTTCAAG +
Preference number: 6 (lower is better)
Translates to: WARSCCCVMRRA*VSAICSCSTFK
Trigger: CTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGATCGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS CAA 90 bp AGTGGTCCACGGGCCGCTCTGTCATCTTCAACCCCAAATTCACCCTaGACACTTGTAAGACTGGCTGCGGTATCCAAGCTAGTGGCAGTT +
Preference number: 6 (lower is better)
Translates to: SGPRAALSSSTPNSP*TLVRLAAVSKLVAV
Trigger: AACTGCCACTAGCTTGGATACCGCAGCCAGTCTTACAAGTGTCAAGGGTGAATTTGGGGTTGAAGATGACAGAGCGGCCCGTGGACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 90 bp GAGCTGGTCCTCTGCAAGGGCTGTCTTCCTCATTTCTTGCTGCAATaGGGCCTGGAAATGGCTTTTAAGACGGGCAGCCTCTTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: ELVLCKGCLPHFLLQ*GLEMAFKTGSLLLK
Trigger: CTTCAGCAAGAGGCTGCCCGTCTTAAAAGCCATTTCCAGGCCCAATTGCAGCAAGAAATGAGGAAGACAGCCCTTGCAGAGGACCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp AACCCCAAATTCACCCTTGACACTTGTAAGACTGGCTaGGGTATCCAAGCTAGTGGCAGTTCCGGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: NPKFTLDTCKTG*GIQASGSSGAV
Trigger: GACAGCACCGGAACTGCCACTAGCTTGGATACCGCAGCCAGTCTTACAAGTGTCAAGGGTGAATTTGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS GCA 72 bp ATCGTGCTGCTGTGTAATGAGGCGGGCTTTGGTTTCTaGTATCTGCTCTTGCAGCACCTTCAAGTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: IVLLCNEAGFGF*YLLLQHLQVSL
Trigger: GAGGGAGACTTGAAGGTGCTGCAAGAGCAGATAGCAGAAACCAAAGCCCGCCTCATTACACAGCAGCACGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
ENSMUST00000165455.2
CDS TCA 72 bp CCTTCCCCAGGCTCCCATCTTTGGTGTTCTTGCTTTTaGGCACAACTTGGGCTCGCATCTTATACCGCTCAA +
Preference number: 6 (lower is better)
Translates to: PSPGSHLWCSCF*AQLGLASYTAQ
Trigger: TTGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 72 bp CTGTGTCTCGATGGTCTCCAAGAGATCCTTCTTACTTaGGCCGCCCCCGAAATTCATCCCAAACTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: LCLDGLQEILLT*AAPEIHPKLLH
Trigger: ATGGAGAAGTTTGGGATGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTCTTGGAGACCATCGAGACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 72 bp TCTGTGTCTCGATGGTCTCCAAGAGATCCTTCTTACTaGGGCCGCCCCCGAAATTCATCCCAAACTTCTCCA +
Preference number: 6 (lower is better)
Translates to: SVSRWSPRDPSY*GRPRNSSQTSP
Trigger: TGGAGAAGTTTGGGATGAATTTCGGGGGCGGCCCAAGTAAGAAGGATCTCTTGGAGACCATCGAGACACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 72 bp TCCTTCCCCAGGCTCCCATCTTTGGTGTTCTTGCTTTaGAGCACAACTTGGGCTCGCATCTTATACCGCTCA +
Preference number: 6 (lower is better)
Translates to: SFPRLPSLVFLL*STTWARILYRS
Trigger: TGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 90 bp CTTCCCCAGGCTCCCATCTTTGGTGTTCTTGCTTTTGAGCACAACTaGGGCTCGCATCTTATACCGCTCAAACTCTTCCTTCAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: LPQAPIFGVLAFEHN*GSHLIPLKLFLQLL
Trigger: AAGCAGCTGAAGGAAGAGTTTGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAGCCTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 90 bp ACCTGTAGTAGCTTCTTGAGCTTCTCCATCTTGTCCTTCAAGACATaGATATCCAGACTGGATTCGTCGCCATGGATGTCAAGGGAGGAC +
Preference number: 6 (lower is better)
Translates to: TCSSFLSFSILSFKT*ISRLDSSPWMSRED
Trigger: GTCCTCCCTTGACATCCATGGCGACGAATCCAGTCTGGATATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 90 bp TCCAGGGTCACCTGGCTTTTCCTAGCTGCAACCTGTAGTAGCTTCTaGAGCTTCTCCATCTTGTCCTTCAAGACATTGATATCCAGACTG +
Preference number: 6 (lower is better)
Translates to: SRVTWLFLAATCSSF*SFSILSFKTLISRL
Trigger: CAGTCTGGATATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGTTGCAGCTAGGAAAAGCCAGGTGACCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 90 bp CTTTTCCTAGCTGCAACCTGTAGTAGCTTCTTGAGCTTCTCCATCTaGTCCTTCAAGACATTGATATCCAGACTGGATTCGTCGCCATGG +
Preference number: 6 (lower is better)
Translates to: LFLAATCSSFLSFSI*SFKTLISRLDSSPW
Trigger: CCATGGCGACGAATCCAGTCTGGATATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGTTGCAGCTAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CCA 72 bp CTCCCATCTTTGGTGTTCTTGCTTTTGAGCACAACTTaGGCTCGCATCTTATACCGCTCAAACTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: LPSLVFLLLSTT*ARILYRSNSSF
Trigger: GAAGGAAGAGTTTGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 72 bp GCTCCCATCTTTGGTGTTCTTGCTTTTGAGCACAACTaGGGCTCGCATCTTATACCGCTCAAACTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: APIFGVLAFEHN*GSHLIPLKLFL
Trigger: AAGGAAGAGTTTGAGCGGTATAAGATGCGAGCCCAAGTTGTGCTCAAAAGCAAGAACACCAAAGATGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 72 bp AGCTTCTTGAGCTTCTCCATCTTGTCCTTCAAGACATaGATATCCAGACTGGATTCGTCGCCATGGATGTCA +
Preference number: 6 (lower is better)
Translates to: SFLSFSILSFKT*ISRLDSSPWMS
Trigger: TGACATCCATGGCGACGAATCCAGTCTGGATATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 72 bp GCTGCAACCTGTAGTAGCTTCTTGAGCTTCTCCATCTaGTCCTTCAAGACATTGATATCCAGACTGGATTCG +
Preference number: 6 (lower is better)
Translates to: AATCSSFLSFSI*SFKTLISRLDS
Trigger: CGAATCCAGTCTGGATATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGTTGCAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4
CDS CAA 72 bp ACCTGGCTTTTCCTAGCTGCAACCTGTAGTAGCTTCTaGAGCTTCTCCATCTTGTCCTTCAAGACATTGATA +
Preference number: 6 (lower is better)
Translates to: TWLFLAATCSSF*SFSILSFKTLI
Trigger: TATCAATGTCTTGAAGGACAAGATGGAGAAGCTCAAGAAGCTACTACAGGTTGCAGCTAGGAAAAGCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064377.7
ENSMUST00000090511.4