Pregenerated sensors for GCAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006378, ENSMUSG00000116378Ensembl transcript IDs: ENSMUST00000006544.9, ENSMUST00000171999.9, ENSMUST00000229276.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGATCCGTGGTACTGCCCGGTTCCTGCCAGGCACTTGGGCCAGGCTaGAGAAGCACGGCCAACACCAGCCCATTACCCACCATGCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: RSVVLPGSCQALGPG*RSTANTSPLPTMPN Trigger: GTTGGGCATGGTGGGTAATGGGCTGGTGTTGGCCGTGCTTCTGCAGCCTGGCCCAAGTGCCTGGCAGGAACCGGGCAGTACCACGGATCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR GCA 90 bp | CCTTCTGCTAGGGCACAGGAGACAAGGTGCCCACCCAGCTTAGGCTaGAGAAAGGGTCCACAGGGCTGGTTCTCCACTGCCCTGCACAGC | + |
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Preference number: 1 (lower is better) Translates to: PSARAQETRCPPSLG*RKGPQGWFSTALHS Trigger: GCTGTGCAGGGCAGTGGAGAACCAGCCCTGTGGACCCTTTCTGCAGCCTAAGCTGGGTGGGCACCTTGTCTCCTGTGCCCTAGCAGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 90 bp | GCGCTGACACTTTGGGGCTTAGAAATGCCCTCTGGAAGTCCACACTaGAGGCCGGAAGGGCAGGTGCCACTAAGGCCTTCCTTTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: ALTLWGLEMPSGSPH*RPEGQVPLRPSFPP Trigger: GGGAGGAAAGGAAGGCCTTAGTGGCACCTGCCCTTCCGGCCTCCAGTGTGGACTTCCAGAGGGCATTTCTAAGCCCCAAAGTGTCAGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR GCA 90 bp | GGTCCACAGGGCTGGTTCTCCACTGCCCTGCACAGCAGCACAGAATaGTTTATGTACGAAACGGTGGCTCCCAGACACAGCATCCCGACT | + |
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Preference number: 1 (lower is better) Translates to: GPQGWFSTALHSSTE*FMYETVAPRHSIPT Trigger: AGTCGGGATGCTGTGTCTGGGAGCCACCGTTTCGTACATAAAGCATTCTGTGCTGCTGTGCAGGGCAGTGGAGAACCAGCCCTGTGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR TCA 90 bp | CAAAATGGGAAGGAGGCCACACCTATGGTAATGGAGCAGCAGGTGTaGTGGTTGCCGGTAGGAAGACAGGGTAGAAGGACAGGGCCTTCG | + |
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Preference number: 1 (lower is better) Translates to: QNGKEATPMVMEQQV*WLPVGRQGRRTGPS Trigger: CGAAGGCCCTGTCCTTCTACCCTGTCTTCCTACCGGCAACCATCACACCTGCTGCTCCATTACCATAGGTGTGGCCTCCTTCCCATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 90 bp | TTCAACCAGGCTCTAGAAGTCTGGGTTGAGTCACAGCCTCTGATCTaGGCTGACCAGAGGAGCCCTATGTCAGCGGCAGTGGAGGAACTT | + |
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Preference number: 1 (lower is better) Translates to: FNQALEVWVESQPLI*ADQRSPMSAAVEEL Trigger: AAGTTCCTCCACTGCCGCTGACATAGGGCTCCTCTGGTCAGCCCAGATCAGAGGCTGTGACTCAACCCAGACTTCTAGAGCCTGGTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 90 bp | TCTGATGACAAGTACAGGCCCATTTTCAACCAGGCTCTAGAAGTCTaGGTTGAGTCACAGCCTCTGATCTGGGCTGACCAGAGGAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: SDDKYRPIFNQALEV*VESQPLIWADQRSP Trigger: AGGGCTCCTCTGGTCAGCCCAGATCAGAGGCTGTGACTCAACCCAGACTTCTAGAGCCTGGTTGAAAATGGGCCTGTACTTGTCATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 90 bp | AACAAGGATTCGATGTCCTTCAGGGGTGATCTGCTTTCTTCTTTCTaGGGCCTGAACCTCTGCCCTCTCCTAGGGAACACAGGTCTAGGA | + |
|
Preference number: 1 (lower is better) Translates to: NKDSMSFRGDLLSSF*GLNLCPLLGNTGLG Trigger: TCCTAGACCTGTGTTCCCTAGGAGAGGGCAGAGGTTCAGGCCCCAGAAAGAAGAAAGCAGATCACCCCTGAAGGACATCGAATCCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 90 bp | GAGATTCCACCCCTCCTTTCCCACAGTAAAGCAAGGTCAGCAAAATaGGAAGGAGGCCACACCTATGGTAATGGAGCAGCAGGTGTGATG | + |
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Preference number: 1 (lower is better) Translates to: EIPPLLSHSKARSAK*EGGHTYGNGAAGVM Trigger: CATCACACCTGCTGCTCCATTACCATAGGTGTGGCCTCCTTCCCATTTTGCTGACCTTGCTTTACTGTGGGAAAGGAGGGGTGGAATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 90 bp | TACTACACAATTCCAATTTATACCTGGCCCCCTGCGCTGACACTTTaGGGCTTAGAAATGCCCTCTGGAAGTCCACACTGGAGGCCGGAA | + |
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Preference number: 1 (lower is better) Translates to: YYTIPIYTWPPALTL*GLEMPSGSPHWRPE Trigger: TTCCGGCCTCCAGTGTGGACTTCCAGAGGGCATTTCTAAGCCCCAAAGTGTCAGCGCAGGGGGCCAGGTATAAATTGGAATTGTGTAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR GCA 90 bp | TCCTTCAGGGGTGATCTGCTTTCTTCTTTCTGGGGCCTGAACCTCTaGCCTCTCCTAGGGAACACAGGTCTAGGAACAATTCTCATTTGG | + |
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Preference number: 1 (lower is better) Translates to: SFRGDLLSSFWGLNL*PLLGNTGLGTILIW Trigger: CCAAATGAGAATTGTTCCTAGACCTGTGTTCCCTAGGAGAGGGCAGAGGTTCAGGCCCCAGAAAGAAGAAAGCAGATCACCCCTGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR TCA 90 bp | GTTCTTCAGGTAGCCAGAGGTACGCCTACCCAGAATAAAGCAGACTaGAGTGTCATAGCCAAATTCCACATTGTTGTCTCTCTGATGACA | + |
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Preference number: 1 (lower is better) Translates to: VLQVARGTPTQNKAD*SVIAKFHIVVSLMT Trigger: TGTCATCAGAGAGACAACAATGTGGAATTTGGCTATGACACTTCAGTCTGCTTTATTCTGGGTAGGCGTACCTCTGGCTACCTGAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTTGAGGGCTGCCCAACAGCCTGATCCAAGGCCCCCAAGTAGCCAGCGGTTATGTACGAAACGGTaGCTCCCAGACACAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: PGLRAAQQPDPRPPSSQRLCTKR*LPDTAS Trigger: GGATGCTGTGTCTGGGAGCCACCGTTTCGTACATAA...CCGCTGGCTACTTGGGGGCCTTGGATCAGGCTGTTGGGCAGCCCTCAAGCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR-3UTR TCA 90 bp | TGCGCTGACACTTTGGGGCTTAGAAATGCCCTCTGGAAGTCCACACTGGAGGCCTGCCCAACAGGAAGATaGGGGCAAAGACCACCGGCA | + |
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Preference number: 2 (lower is better) Translates to: CADTLGLRNALWKSTLEACPTGR*GQRPPA Trigger: TGCCGGTGGTCTTTGCCCTCATCTTCCTGTTGGGCA...GGCCTCCAGTGTGGACTTCCAGAGGGCATTTCTAAGCCCCAAAGTGTCAGCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR CAA 90 bp | CGCTGCGCCCCCTGGCGGCTGAACCATCAGACAGACTATCGGCTTTaGAATCAGAGACAGAAAGGTGTCCCTATGGAACATCAGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: RCAPWRLNHQTDYRL*NQRQKGVPMEHQLS Trigger: AGAGAGCTGATGTTCCATAGGGACACCTTTCTGTCTCTGATTCAAAAGCCGATAGTCTGTCTGATGGTTCAGCCGCCAGGGGGCGCAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGCAGAAAGGGTCCACAGGGCTGGTTCTCCACTGCCCTGCACAGCAGCACCAGAATAAAGCAGACTaGAGTGTCATAGCCAAATTC | + |
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Preference number: 2 (lower is better) Translates to: RLQKGSTGLVLHCPAQQHQNKAD*SVIAKF Trigger: GAATTTGGCTATGACACTTCAGTCTGCTTTATTCTG...GTGCTGCTGTGCAGGGCAGTGGAGAACCAGCCCTGTGGACCCTTTCTGCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR-3UTR GCA 90 bp | CTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGAGACAAGGTGCCGGGCTGGTTCTCCACTaGCCTGCACAGCAGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LIWQLHFILLLGHRRQGAGLVLH*PAQQHR Trigger: TCTGTGCTGCTGTGCAGGGCAGTGGAGAACCAGCCC...GGCACCTTGTCTCCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CAA 90 bp | TTACTACACAATTCCAATTTATACCTGGCCCCCTGCGCTGACACTTaGGGGCTTAGAAATGCCCTCTGGAAGTCCACACTGGAGGCCGGA | + |
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Preference number: 2 (lower is better) Translates to: LLHNSNLYLAPCADT*GLRNALWKSTLEAG Trigger: TCCGGCCTCCAGTGTGGACTTCCAGAGGGCATTTCTAAGCCCCAAAGTGTCAGCGCAGGGGGCCAGGTATAAATTGGAATTGTGTAGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGGAGTTTCTTTTGTTACTACACAATTCCAATTTATACCTGGCCCCCTGCGCAGAGATCCGTGGTACTaGCCGGTTCCTGCCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LGVSFVTTQFQFIPGPLRRDPWY*PVPARH Trigger: GTGCCTGGCAGGAACCGGGCAGTACCACGGATCTCT...GCGCAGGGGGCCAGGTATAAATTGGAATTGTGTAGTAACAAAAGAAACTCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCCACACCTATGGTAATGGAGCAGCAGGTGTGATGGTTGCCGGTAGGAAGAGAAAGGTGTCCCTATaGAACATCAGCTCTCTAAAG | + |
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Preference number: 2 (lower is better) Translates to: GGHTYGNGAAGVMVAGRKRKVSL*NISSLK Trigger: CTTTAGAGAGCTGATGTTCCATAGGGACACCTTTCT...CTTCCTACCGGCAACCATCACACCTGCTGCTCCATTACCATAGGTGTGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR-3UTR CCA 90 bp | TTGGGAGTTTCTTTTGTTACTACACAATTCCAATTTATACCTGGCCCCCTGCGCTCTGGAAGTCCACACTaGAGGCCGGAAGGGCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LGVSFVTTQFQFIPGPLRSGSPH*RPEGQV Trigger: CACCTGCCCTTCCGGCCTCCAGTGTGGACTTCCAGA...GCGCAGGGGGCCAGGTATAAATTGGAATTGTGTAGTAACAAAAGAAACTCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGGAACAATTCTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGGCCTCTGATCTGGGCTaGCCAGAGGAGCCCTATGTC | + |
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Preference number: 2 (lower is better) Translates to: LGTILIWQLHFILLLGHRASDLG*PEEPYV Trigger: GACATAGGGCTCCTCTGGTCAGCCCAGATCAGAGGC...CCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAGAATTGTTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTATTGGGAGTTTCTTTTGTTACTACACAATTCCAATTTATACCTGGCCCCCGGTCCCTCTCTGGCCTaGCCCAGGTACAGCTCACCT | + |
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Preference number: 2 (lower is better) Translates to: VYWEFLLLLHNSNLYLAPGPSLA*PRYSSP Trigger: AGGTGAGCTGTACCTGGGTCAGGCCAGAGAGGGACC...GGGGGCCAGGTATAAATTGGAATTGTGTAGTAACAAAAGAAACTCCCAATACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR CAA 90 bp | CCTCTGCCCTCTCCTAGGGAACACAGGTCTAGGAACAATTCTCATTaGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGAGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: PLPSPREHRSRNNSH*AVTFYPSARAQETR Trigger: CCTTGTCTCCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAGAATTGTTCCTAGACCTGTGTTCCCTAGGAGAGGGCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGAATCAGAGACAGAAAGGTGTCCCTATGGAACATCAGCTCTCTAAAGTGGGAAGATGCACCTCATaGGAGATCCAGCCCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LLNQRQKGVPMEHQLSKVGRCTS*EIQPLP Trigger: AGGCAGGGGCTGGATCTCGCATGAGGTGCATCTTCC...CACTTTAGAGAGCTGATGTTCCATAGGGACACCTTTCTGTCTCTGATTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR-3UTR CCA 90 bp | AGTAAAGCAAGGTCAGCAAAATGGGAAGGAGGCCACACCTATGGTAATGGAGCACATCCCGACTTAGTTTaGGGGAAGATGCACCTCATG | + |
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Preference number: 2 (lower is better) Translates to: SKARSAKWEGGHTYGNGAHPDLV*GKMHLM Trigger: CATGAGGTGCATCTTCCCCCAAACTAAGTCGGGATG...TGCTCCATTACCATAGGTGTGGCCTCCTTCCCATTTTGCTGACCTTGCTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR TCA 72 bp | ATAGCTAGGGAGCTACCCAAGGCCACACCCCCACACTaGGCCTACAGCAGCAGTCATAAGCCTGCGGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: IARELPKATPPH*AYSSSHKPAGL Trigger: CAGCCCCGCAGGCTTATGACTGCTGCTGTAGGCTCAGTGTGGGGGTGTGGCCTTGGGTAGCTCCCTAGCTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 72 bp | AAGGACAGGGCCTTCGTAGCAGCAAACCAGCCCTTCTaGCCTGGCTTGAGGGCTGCCCAACAGCCTGATCCA | + |
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Preference number: 3 (lower is better) Translates to: KDRAFVAANQPF*PGLRAAQQPDP Trigger: TGGATCAGGCTGTTGGGCAGCCCTCAAGCCAGGCCAGAAGGGCTGGTTTGCTGCTACGAAGGCCCTGTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR-3UTR CAA 90 bp | AGATGCACCTCATGCGAGATCCAGCCCCTGCCTGGTTCTTCAGGTAGCCAGAGGGGCAGTGGAGGAACTTaGGCTCTGCAGGTCCCTACC | + |
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Preference number: 3 (lower is better) Translates to: RCTSCEIQPLPGSSGSQRGSGGT*ALQVPT Trigger: GGTAGGGACCTGCAGAGCCAAAGTTCCTCCACTGCC...CCTCTGGCTACCTGAAGAACCAGGCAGGGGCTGGATCTCGCATGAGGTGCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR TCA 72 bp | ACTGAGCCTACAGCAGCAGTCATAAGCCTGCGGGGCTaGGCCTGCGAGATTCCACCCCTCCTTTCCCACAGT | + |
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Preference number: 3 (lower is better) Translates to: TEPTAAVISLRG*ACEIPPLLSHS Trigger: ACTGTGGGAAAGGAGGGGTGGAATCTCGCAGGCTCAGCCCCGCAGGCTTATGACTGCTGCTGTAGGCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 72 bp | CTTTGGGGCTTAGAAATGCCCTCTGGAAGTCCACACTaGAGGCCGGAAGGGCAGGTGCCACTAAGGCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LWGLEMPSGSPH*RPEGQVPLRPS Trigger: GGAAGGCCTTAGTGGCACCTGCCCTTCCGGCCTCCAGTGTGGACTTCCAGAGGGCATTTCTAAGCCCCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR-3UTR CAA 90 bp | GAGGCCGGAAGGGCAGGTGCCACTAAGGCCTTCCTTTCCTCCCACCAAAGTCTGAGCAGATGTACCGTCTaGCACACGAAAGCCCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: EAGRAGATKAFLSSHQSLSRCTV*HTKAPK Trigger: CTTTGGGGCTTTCGTGTGCAAGACGGTACATCTGCT...CAGACTTTGGTGGGAGGAAAGGAAGGCCTTAGTGGCACCTGCCCTTCCGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR CCA 72 bp | GCTCTAGAAGTCTGGGTTGAGTCACAGCCTCTGATCTaGGCTGACCAGAGGAGCCCTATGTCAGCGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: ALEVWVESQPLI*ADQRSPMSAAV Trigger: CACTGCCGCTGACATAGGGCTCCTCTGGTCAGCCCAGATCAGAGGCTGTGACTCAACCCAGACTTCTAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR GCA 72 bp | GGCTGGTTCTCCACTGCCCTGCACAGCAGCACAGAATaGTTTATGTACGAAACGGTGGCTCCCAGACACAGC | + |
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Preference number: 3 (lower is better) Translates to: GWFSTALHSSTE*FMYETVAPRHS Trigger: GCTGTGTCTGGGAGCCACCGTTTCGTACATAAAGCATTCTGTGCTGCTGTGCAGGGCAGTGGAGAACCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR GCA 72 bp | AGGCTGCAGAAAGGGTCCACAGGGCTGGTTCTCCACTaGCCTGCACAGCAGCACAGAATGCTTTATGTACGA | + |
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Preference number: 3 (lower is better) Translates to: RLQKGSTGLVLH*PAQQHRMLYVR Trigger: TCGTACATAAAGCATTCTGTGCTGCTGTGCAGGGCAGTGGAGAACCAGCCCTGTGGACCCTTTCTGCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR TCA 72 bp | AAGGAGGCCACACCTATGGTAATGGAGCAGCAGGTGTaGTGGTTGCCGGTAGGAAGACAGGGTAGAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: KEATPMVMEQQV*WLPVGRQGRRT Trigger: TGTCCTTCTACCCTGTCTTCCTACCGGCAACCATCACACCTGCTGCTCCATTACCATAGGTGTGGCCTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR GCA 72 bp | ACATTTTATCCTTCTGCTAGGGCACAGGAGACAAGGTaGCCACCCAGCTTAGGCTGCAGAAAGGGTCCACAG | + |
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Preference number: 3 (lower is better) Translates to: TFYPSARAQETR*PPSLGCRKGPQ Trigger: CTGTGGACCCTTTCTGCAGCCTAAGCTGGGTGGGCACCTTGTCTCCTGTGCCCTAGCAGAAGGATAAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 72 bp | TCGATGTCCTTCAGGGGTGATCTGCTTTCTTCTTTCTaGGGCCTGAACCTCTGCCCTCTCCTAGGGAACACA | + |
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Preference number: 3 (lower is better) Translates to: SMSFRGDLLSSF*GLNLCPLLGNT Trigger: TGTGTTCCCTAGGAGAGGGCAGAGGTTCAGGCCCCAGAAAGAAGAAAGCAGATCACCCCTGAAGGACATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 72 bp | AAGTACAGGCCCATTTTCAACCAGGCTCTAGAAGTCTaGGTTGAGTCACAGCCTCTGATCTGGGCTGACCAG | + |
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Preference number: 3 (lower is better) Translates to: KYRPIFNQALEV*VESQPLIWADQ Trigger: CTGGTCAGCCCAGATCAGAGGCTGTGACTCAACCCAGACTTCTAGAGCCTGGTTGAAAATGGGCCTGTACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 72 bp | CCCCTCCTTTCCCACAGTAAAGCAAGGTCAGCAAAATaGGAAGGAGGCCACACCTATGGTAATGGAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PLLSHSKARSAK*EGGHTYGNGAA Trigger: TGCTGCTCCATTACCATAGGTGTGGCCTCCTTCCCATTTTGCTGACCTTGCTTTACTGTGGGAAAGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 72 bp | ATTCCAATTTATACCTGGCCCCCTGCGCTGACACTTTaGGGCTTAGAAATGCCCTCTGGAAGTCCACACTGG | + |
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Preference number: 3 (lower is better) Translates to: IPIYTWPPALTL*GLEMPSGSPHW Trigger: CCAGTGTGGACTTCCAGAGGGCATTTCTAAGCCCCAAAGTGTCAGCGCAGGGGGCCAGGTATAAATTGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR GCA 72 bp | GGTGATCTGCTTTCTTCTTTCTGGGGCCTGAACCTCTaGCCTCTCCTAGGGAACACAGGTCTAGGAACAATT | + |
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Preference number: 3 (lower is better) Translates to: GDLLSSFWGLNL*PLLGNTGLGTI Trigger: AATTGTTCCTAGACCTGTGTTCCCTAGGAGAGGGCAGAGGTTCAGGCCCCAGAAAGAAGAAAGCAGATCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR GCA 72 bp | TTGTTACTACACAATTCCAATTTATACCTGGCCCCCTaGGCTGACACTTTGGGGCTTAGAAATGCCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LLLHNSNLYLAP*ADTLGLRNALW Trigger: CCAGAGGGCATTTCTAAGCCCCAAAGTGTCAGCGCAGGGGGCCAGGTATAAATTGGAATTGTGTAGTAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| 3UTR TCA 72 bp | GTAGCCAGAGGTACGCCTACCCAGAATAAAGCAGACTaGAGTGTCATAGCCAAATTCCACATTGTTGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: VARGTPTQNKAD*SVIAKFHIVVS Trigger: AGAGACAACAATGTGGAATTTGGCTATGACACTTCAGTCTGCTTTATTCTGGGTAGGCGTACCTCTGGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR CCA 72 bp | CTCCTAGGGAACACAGGTCTAGGAACAATTCTCATTTaGCAGTTACATTTTATCCTTCTGCTAGGGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: LLGNTGLGTILI*QLHFILLLGHR Trigger: CCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAGAATTGTTCCTAGACCTGTGTTCCCTAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGGGAACACAGGTCTAGGAACAATTCTCATTTGGCAGTTACATTTTATCCTTGCATCCCGACTTAGTTaGGGGGAAGATGCACCTCAT | + |
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Preference number: 3 (lower is better) Translates to: LGNTGLGTILIWQLHFILASRLS*GEDAPH Trigger: ATGAGGTGCATCTTCCCCCAAACTAAGTCGGGATGC...AAGGATAAAATGTAACTGCCAAATGAGAATTGTTCCTAGACCTGTGTTCCCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| CDS-3UTR GCA 90 bp | AGATGCACCTCATGCGAGATCCAGCCCCTGCCTGGTTCTTCAGGTAGCCAGAGGGGGGACAGCGCCCCGTaGCACATGAAGCTGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RCTSCEIQPLPGSSGSQRGDSAP*HMKLAH Trigger: GTGGGCCAGCTTCATGTGGCACGGGGCGCTGTCCCC...CCTCTGGCTACCTGAAGAACCAGGCAGGGGCTGGATCTCGCATGAGGTGCATCT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| CDS-3UTR GCA 90 bp | GACTTAGTTTGGGGGAAGATGCACCTCATGCGAGATCCAGCCCCTGCCTGGTTCTGCCGTCCACGCGGATaGTCGGTCCCTGGCGGGACG | + |
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Preference number: 4 (lower is better) Translates to: DLVWGKMHLMRDPAPAWFCRPRG*SVPGGT Trigger: CGTCCCGCCAGGGACCGAGCATCCGCGTGGACGGCA...GAACCAGGCAGGGGCTGGATCTCGCATGAGGTGCATCTTCCCCCAAACTAAGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| CDS-3UTR CCA 90 bp | CAGGTCCCTCTCTGGCCTGACCCAGGTACAGCTCACCTATCCACTGAGACGGCCCAGGGGGCAGGCTGTTaGAGAAGAGGTAGGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVPLWPDPGTAHLSTETAQGAGC*RRGRAE Trigger: CTCGGCCCTACCTCTTCTCCAACAGCCTGCCCCCTG...GGCCGTCTCAGTGGATAGGTGAGCTGTACCTGGGTCAGGCCAGAGAGGGACCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCAGAAAGGGTCCACAGGGCTGGTTCTCCACTGCCCTGCACAGCAGCACCTAGCAGCTCATCTGTaGCCCGTCCTGTGGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLQKGSTGLVLHCPAQQHLAAHL*PVLWAQ Trigger: TTGGGCCCACAGGACGGGGCACAGATGAGCTGCTAG...GTGCTGCTGTGCAGGGCAGTGGAGAACCAGCCCTGTGGACCCTTTCTGCAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCCACACTGGAGGCCGGAAGGGCAGGTGCCACTAAGGCCTTCCTTTCCTCTAGCAGCTCATCTGTaGCCCGTCCTGTGGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSPHWRPEGQVPLRPSFPLAAHL*PVLWAQ Trigger: TTGGGCCCACAGGACGGGGCACAGATGAGCTGCTAG...AGGAAAGGAAGGCCTTAGTGGCACCTGCCCTTCCGGCCTCCAGTGTGGACTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| CDS-3UTR CCA 90 bp | TTCGTAGCAGCAAACCAGCCCTTCTGGCCTGGCTTGAGGGCTGCCCAACAGCCTGTGGCTCAGGCCCGGTaGTATATCCCCCTGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FVAANQPFWPGLRAAQQPVAQAR*YIPLML Trigger: GAGCATCAGGGGGATATACCACCGGGCCTGAGCCAC...AGGCTGTTGGGCAGCCCTCAAGCCAGGCCAGAAGGGCTGGTTTGCTGCTACGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| CDS-3UTR GCA 90 bp | TGGAGGCCGGAAGGGCAGGTGCCACTAAGGCCTTCCTTTCCTCCCACCAAAGTCCAGAGTCTGCAGACCTaGCTGGATCACTGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WRPEGQVPLRPSFPPTKVQSLQT*LDHCRV Trigger: CACCCTGCAGTGATCCAGGCAGGTCTGCAGACTCTG...GACTTTGGTGGGAGGAAAGGAAGGCCTTAGTGGCACCTGCCCTTCCGGCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| CDS-3UTR TCA 90 bp | AGGCTGCAGAAAGGGTCCACAGGGCTGGTTCTCCACTGCCCTGCACAGCAGCACGTCGGATGCCGTCAATaGTGGAAGCATGGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLQKGSTGLVLHCPAQQHVGCRQ*WKHGSA Trigger: AGCTGAACCATGCTTCCATCATTGACGGCATCCGAC...GTGCTGCTGTGCAGGGCAGTGGAGAACCAGCCCTGTGGACCCTTTCTGCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
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| CDS-3UTR TCA 90 bp | CTGCAGAAGCACGGCCAACACCAGCCCATTACCCACCATGCCCAACAGGAAGATGGGGTGATCGGCTCCTaGGACAGTAAAACCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQKHGQHQPITHHAQQEDGVIGS*DSKTSS Trigger: GCTGCTGGTTTTACTGTCTCAGGAGCCGATCACCCC...ATCTTCCTGTTGGGCATGGTGGGTAATGGGCTGGTGTTGGCCGTGCTTCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| CDS-3UTR TCA 90 bp | ATGAGCAGATGTACCGTCTTGCACACGAAAGCCCCAAAGAGCCAGGCATCCAGTAGGATGCAGCGCAACTaGGCCAGCGCTGAATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: MSRCTVLHTKAPKSQASSRMQRN*ASAECA Trigger: CGCACATTCAGCGCTGGCTCAGTTGCGCTGCATCCT...ACTGGATGCCTGGCTCTTTGGGGCTTTCGTGTGCAAGACGGTACATCTGCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| CDS-3UTR TCA 90 bp | GAAGAGATCCGTGGTACTGCCCGGTTCCTGCCAGGCACTTGGGCCAGGCTGCAGATGTCATCTGCCATTTaGGAAGACAACCGTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EEIRGTARFLPGTWARLQMSSAI*EDNRAS Trigger: AGATGCACGGTTGTCTTCTCAAATGGCAGATGACAT...CTGCAGCCTGGCCCAAGTGCCTGGCAGGAACCGGGCAGTACCACGGATCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| CDS-3UTR CCA 90 bp | GACTTAGTTTGGGGGAAGATGCACCTCATGCGAGATCCAGCCCCTGCCTGGTTCGAGCCTCCTTCAGCTTaGCTTCCAGGTCAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: DLVWGKMHLMRDPAPAWFEPPSA*LPGQPC Trigger: ACATGGCTGACCTGGAAGCCAAGCTGAAGGAGGCTC...GAACCAGGCAGGGGCTGGATCTCGCATGAGGTGCATCTTCCCCCAAACTAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGTGCCACTAAGGCCTTCCTTTCCTCCCACCAAAGTCTGGTCCCTAGTGAGCCTCCTTCAGCTTaGCTTCCAGGTCAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGATKAFLSSHQSLVPSEPPSA*LPGQPC Trigger: ACATGGCTGACCTGGAAGCCAAGCTGAAGGAGGCTC...ACTAGGGACCAGACTTTGGTGGGAGGAAAGGAAGGCCTTAGTGGCACCTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| CDS-3UTR TCA 90 bp | GCTGCTGGCATACATGGTGAGGTAGATGAGCAGATGTACCGTCTTGCACACGAACGCAGCCTGTGCTTCTaGGCCTCCTTCAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGIHGEVDEQMYRLAHERSLCF*ASFSLA Trigger: AGCCAAGCTGAAGGAGGCTCAGAAGCACAGGCTGCG...TTCGTGTGCAAGACGGTACATCTGCTCATCTACCTCACCATGTATGCCAGCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| CDS-3UTR GCA 90 bp | ATTCCAATTTATACCTGGCCCCCTGCGCTGACACTTTGGGGCTTAGAAATGCCCGTTCGCTGTCCAGGATaGAGCGCAACTGAGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IPIYTWPPALTLWGLEMPVRCPG*SATEPA Trigger: CGCTGGCTCAGTTGCGCTGCATCCTGGACAGCGAAC...GGGCATTTCTAAGCCCCAAAGTGTCAGCGCAGGGGGCCAGGTATAAATTGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| CDS-3UTR CCA 90 bp | AGATGCACCTCATGCGAGATCCAGCCCCTGCCTGGTTCTTCAGGTAGCCAGAGGTTGGCAGCCATAGACTaGATGATGGCATTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCTSCEIQPLPGSSGSQRLAAID*MMALLS Trigger: GGAGAGCAATGCCATCATCCAGTCTATGGCTGCCAA...CCTCTGGCTACCTGAAGAACCAGGCAGGGGCTGGATCTCGCATGAGGTGCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTGAGGATGAAGAGATCCGTGGTACTGCCCGGTTCCTGCCAGGCACTTGGGTATTGGCACAGAAGTTaGGGATTCCTCCCGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: KLRMKRSVVLPGSCQALGYWHRS*GFLPRC Trigger: GCATCTCGGGAGGAATCCTCAACTTCTGTGCCAATA...CCCAAGTGCCTGGCAGGAACCGGGCAGTACCACGGATCTCTTCATCCTCAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| CDS-3UTR GCA 90 bp | TTGGGAGTTTCTTTTGTTACTACACAATTCCAATTTATACCTGGCCCCCTGCGCGGGGACAGCGCCCCGTaGCACATGAAGCTGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGVSFVTTQFQFIPGPLRGDSAP*HMKLAH Trigger: GTGGGCCAGCTTCATGTGGCACGGGGCGCTGTCCCC...GCGCAGGGGGCCAGGTATAAATTGGAATTGTGTAGTAACAAAAGAAACTCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGGTTCTCCACTGCCCTGCACAGCAGCACAGAATGCTTTATGTACGAAATGTACAGCTGAGATCTaGACCCGGATCCGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAGSPLPCTAAQNALCTKCTAEI*TRIRAL Trigger: CAAGGCCCGGATCCGGGTGCAGATCTCAGCTGTACA...TTTCGTACATAAAGCATTCTGTGCTGCTGTGCAGGGCAGTGGAGAACCAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR TCA 90 bp | CTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGAGACAAGGTGCCAGGATGCAGCGCAACTaGGCCAGCGCTGAATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LIWQLHFILLLGHRRQGARMQRN*ASAECA Trigger: CGCACATTCAGCGCTGGCTCAGTTGCGCTGCATCCT...GGCACCTTGTCTCCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCACAGTAAAGCAAGGTCAGCAAAATGGGAAGGAGGCCACACCTATGGTCAGAGTCTGCAGACCTaGCTGGATCACTGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHSKARSAKWEGGHTYGQSLQT*LDHCRV Trigger: CACCCTGCAGTGATCCAGGCAGGTCTGCAGACTCTG...ACCATAGGTGTGGCCTCCTTCCCATTTTGCTGACCTTGCTTTACTGTGGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR GCA 90 bp | CCAATTTATACCTGGCCCCCTGCGCTGACACTTTGGGGCTTAGAAATGCCCTCTAACTCCTCCAGAGTCTaGAGACCTGCCTGGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: PIYTWPPALTLWGLEMPSNSSRV*RPAWIT Trigger: AGTGATCCAGGCAGGTCTGCAGACTCTGGAGGAGTT...AGAGGGCATTTCTAAGCCCCAAAGTGTCAGCGCAGGGGGCCAGGTATAAATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| CDS-3UTR CCA 90 bp | AAGTTGAGGATGAAGAGATCCGTGGTACTGCCCGGTTCCTGCCAGGCACTTGGGGCTTCTAGATTCTTATaGATGCTCTGGGTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRMKRSVVLPGSCQALGASRFL*MLWVPQ Trigger: CTGTGGGACCCAGAGCATCCATAAGAATCTAGAAGC...CCCAAGTGCCTGGCAGGAACCGGGCAGTACCACGGATCTCTTCATCCTCAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
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| CDS-3UTR TCA 90 bp | CTCTGCCCTCTCCTAGGGAACACAGGTCTAGGAACAATTCTCATTTGGCAGTTAGGGGTGATCGGCTCCTaGGACAGTAAAACCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCPLLGNTGLGTILIWQLGVIGS*DSKTSS Trigger: GCTGCTGGTTTTACTGTCTCAGGAGCCGATCACCCC...TAACTGCCAAATGAGAATTGTTCCTAGACCTGTGTTCCCTAGGAGAGGGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR GCA 90 bp | CTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGAGACAAGGTGCCCAGCTTCCATCTTACTaGGGAACCGCCGGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIWQLHFILLLGHRRQGAQLPSY*GTAGSW Trigger: CCAAGACCCGGCGGTTCCGCAGTAAGATGGAAGCTG...GGCACCTTGTCTCCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCACAGTAAAGCAAGGTCAGCAAAATGGGAAGGAGGCCACACCTATGGTAACTCCTCCAGAGTCTaGAGACCTGCCTGGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSHSKARSAKWEGGHTYGNSSRV*RPAWIT Trigger: AGTGATCCAGGCAGGTCTGCAGACTCTGGAGGAGTT...ACCATAGGTGTGGCCTCCTTCCCATTTTGCTGACCTTGCTTTACTGTGGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR CCA 90 bp | ATTCCAATTTATACCTGGCCCCCTGCGCTGACACTTTGGGGCTTAGAAATGCCCTTGGCAGCCATAGACTaGATGATGGCATTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPIYTWPPALTLWGLEMPLAAID*MMALLS Trigger: GGAGAGCAATGCCATCATCCAGTCTATGGCTGCCAA...GGGCATTTCTAAGCCCCAAAGTGTCAGCGCAGGGGGCCAGGTATAAATTGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| 3UTR CAA 72 bp | AATTCCAATTTATACCTGGCCCCCTGCGCTGACACTTaGGGGCTTAGAAATGCCCTCTGGAAGTCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: NSNLYLAPCADT*GLRNALWKSTL Trigger: CAGTGTGGACTTCCAGAGGGCATTTCTAAGCCCCAAAGTGTCAGCGCAGGGGGCCAGGTATAAATTGGAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGAACAATTCTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGCGCAGCCTGTGCTTCTaGGCCTCCTTCAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGTILIWQLHFILLLGHRRSLCF*ASFSLA Trigger: AGCCAAGCTGAAGGAGGCTCAGAAGCACAGGCTGCG...CCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAGAATTGTTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCACTGCCCTGCACAGCAGCACAGAATGCTTTATGTACGAAACGGTGGCATGTCATCTGCCATTTaGGAAGACAACCGTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VLHCPAQQHRMLYVRNGGMSSAI*EDNRAS Trigger: AGATGCACGGTTGTCTTCTCAAATGGCAGATGACAT...GCCACCGTTTCGTACATAAAGCATTCTGTGCTGCTGTGCAGGGCAGTGGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR GCA 90 bp | CTAGGAACAATTCTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGGTTCGCTGTCCAGGATaGAGCGCAACTGAGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGTILIWQLHFILLLGHRVRCPG*SATEPA Trigger: CGCTGGCTCAGTTGCGCTGCATCCTGGACAGCGAAC...CCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAGAATTGTTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR CCA 90 bp | ACAATTCTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGAGACAACAGGGGGCAGGCTGTTaGAGAAGAGGTAGGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TILIWQLHFILLLGHRRQQGAGC*RRGRAE Trigger: CTCGGCCCTACCTCTTCTCCAACAGCCTGCCCCCTG...TTGTCTCCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAGAATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| 3UTR CAA 72 bp | CCCTGGCGGCTGAACCATCAGACAGACTATCGGCTTTaGAATCAGAGACAGAAAGGTGTCCCTATGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PWRLNHQTDYRL*NQRQKGVPMEH Trigger: ATGTTCCATAGGGACACCTTTCTGTCTCTGATTCAAAAGCCGATAGTCTGTCTGATGGTTCAGCCGCCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR GCA 90 bp | GTGTATTGGGAGTTTCTTTTGTTACTACACAATTCCAATTTATACCTGGCCCCCCAGCTTCCATCTTACTaGGGAACCGCCGGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VYWEFLLLLHNSNLYLAPQLPSY*GTAGSW Trigger: CCAAGACCCGGCGGTTCCGCAGTAAGATGGAAGCTG...GGGGGCCAGGTATAAATTGGAATTGTGTAGTAACAAAAGAAACTCCCAATACAC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| CDS-3UTR CCA 90 bp | CTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGAGACAAGGTGCCGCTTCTAGATTCTTATaGATGCTCTGGGTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LIWQLHFILLLGHRRQGAASRFL*MLWVPQ Trigger: CTGTGGGACCCAGAGCATCCATAAGAATCTAGAAGC...GGCACCTTGTCTCCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR CCA 90 bp | ACTAAGGCCTTCCTTTCCTCCCACCAAAGTCTGGTCCCTAGTTATATTCCGCTATCCAGCGAAATGTTCTaGATGTCAGCCATTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKAFLSSHQSLVPSYIPLSSEMF*MSAIFL Trigger: AAGGAAAATGGCTGACATCCAGAACATTTCGCTGGA...TAGCGGAATATAACTAGGGACCAGACTTTGGTGGGAGGAAAGGAAGGCCTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| 3UTR CAA 72 bp | TCTCCTAGGGAACACAGGTCTAGGAACAATTCTCATTaGGCAGTTACATTTTATCCTTCTGCTAGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SPREHRSRNNSH*AVTFYPSARAQ Trigger: CTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAGAATTGTTCCTAGACCTGTGTTCCCTAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGGAACACAGGTCTAGGAACAATTCTCATTTGGCAGTTACATTTTATCCTTTATTGGCACAGAAGTTaGGGATTCCTCCCGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGNTGLGTILIWQLHFILYWHRS*GFLPRC Trigger: GCATCTCGGGAGGAATCCTCAACTTCTGTGCCAATA...AAGGATAAAATGTAACTGCCAAATGAGAATTGTTCCTAGACCTGTGTTCCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS TCA 90 bp | CCCTTCCAGTTCGCTGTCCAGGATGCAGCGCAACTGAGCCAGCGCTaGATGTGCGCGGCGGCCAGGGGACAGCGCCCCGTGCCACATGAA | + |
|
Preference number: 5 (lower is better) Translates to: PFQFAVQDAAQLSQR*MCAAARGQRPVPHE Trigger: TTCATGTGGCACGGGGCGCTGTCCCCTGGCCGCCGCGCACATTCAGCGCTGGCTCAGTTGCGCTGCATCCTGGACAGCGAACTGGAAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006544.9 ENSMUST00000171999.9 |
||
| CDS-3UTR CAA 90 bp | ACAATTCTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGAGACAAACCCGGATCCGGGCCTaGCCCTTAGGGACCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TILIWQLHFILLLGHRRQTRIRA*PLGTTG Trigger: CCCTGTGGTCCCTAAGGGCAAGGCCCGGATCCGGGT...TTGTCTCCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAGAATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR CAA 90 bp | AATTCCAATTTATACCTGGCCCCCTGCGCTGACACTTTGGGGCTTAGAAATGCCTTATTGGCACAGAAGTaGAGGATTCCTCCCGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: NSNLYLAPCADTLGLRNALLAQK*RIPPEM Trigger: CATCTCGGGAGGAATCCTCAACTTCTGTGCCAATAA...GGCATTTCTAAGCCCCAAAGTGTCAGCGCAGGGGGCCAGGTATAAATTGGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| CDS-3UTR CAA 90 bp | CTAGGAACAATTCTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGGACTGGATGATGGCATaGCTCTCCATGAGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGTILIWQLHFILLLGHRDWMMA*LSMSRS Trigger: GGACCTGCTCATGGAGAGCAATGCCATCATCCAGTC...CCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAGAATTGTTCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS-3UTR CAA 90 bp | CGAGTGTATTGGGAGTTTCTTTTGTTACTACACAATTCCAATTTATACCTGGCCGACTGGATGATGGCATaGCTCTCCATGAGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVYWEFLLLLHNSNLYLADWMMA*LSMSRS Trigger: GGACCTGCTCATGGAGAGCAATGCCATCATCCAGTC...GGCCAGGTATAAATTGGAATTGTGTAGTAACAAAAGAAACTCCCAATACACTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171999.9 |
||
| CDS-3UTR CAA 90 bp | CTAGGAACAATTCTCATTTGGCAGTTACATTTTATCCTTCTGCTAGGGCACAGGTTATTGGCACAGAAGTaGAGGATTCCTCCCGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGTILIWQLHFILLLGHRLLAQK*RIPPEM Trigger: CATCTCGGGAGGAATCCTCAACTTCTGTGCCAATAA...CCTGTGCCCTAGCAGAAGGATAAAATGTAACTGCCAAATGAGAATTGTTCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006544.9 |
||
| CDS TCA 72 bp | GATGCCGTCAATGATGGAAGCATGGTTCAGCTCATCTaGCAGAACCGCATCCTCTGGGGTCAGCAAAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DAVNDGSMVQLI*QNRILWGQQSL Trigger: GAGGCTTTGCTGACCCCAGAGGATGCGGTTCTGTCAGATGAGCTGAACCATGCTTCCATCATTGACGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006544.9 ENSMUST00000171999.9 ENSMUST00000229276.2 |
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