Pregenerated sensors for GBX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034486Ensembl transcript IDs: ENSMUST00000036954.9
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGATGTCCACATCTAGGAGGTGCCTCTGAGTTCTGCTTTAAACAGTaGAGTCTGACACGGGTTCCTTCAGGTGTTAGGGCCTCTCCATGG | + |
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Preference number: 1 (lower is better) Translates to: GCPHLGGASEFCFKQ*SLTRVPSGVRASPW Trigger: CCATGGAGAGGCCCTAACACCTGAAGGAACCCGTGTCAGACTCCACTGTTTAAAGCAGAACTCAGAGGCACCTCCTAGATGTGGACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR GCA 90 bp | CTCAATTTGCTTGGATGTCCACATCTAGGAGGTGCCTCTGAGTTCTaGTTTAAACAGTGGAGTCTGACACGGGTTCCTTCAGGTGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: LNLLGCPHLGGASEF*FKQWSLTRVPSGVR Trigger: CCTAACACCTGAAGGAACCCGTGTCAGACTCCACTGTTTAAAGCAGAACTCAGAGGCACCTCCTAGATGTGGACATCCAAGCAAATTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR CCA 90 bp | TTTGTCCTTGTGTCTCCTGTTTACCTTTGGGCACGTATGGGAAGGTaGTCGCTGAAGGCGACAGAGTACAGTGGTGGTTTTGTTTCATCT | + |
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Preference number: 1 (lower is better) Translates to: FVLVSPVYLWARMGR*SLKATEYSGGFVSS Trigger: AGATGAAACAAAACCACCACTGTACTCTGTCGCCTTCAGCGACCACCTTCCCATACGTGCCCAAAGGTAAACAGGAGACACAAGGACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCGTTAGGGCCTCTCCATaGTGGTGTCCACCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GQERQPGKANEQSRVLDCVRASP*WCPPWL Trigger: CAGCCAGGGTGGACACCACCATGGAGAGGCCCTAAC...GCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTCAGATAGGATATACAAGGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCTGGGAAGGTGGTCGCTaGAGGCGACAGAGTACAGTG | + |
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Preference number: 2 (lower is better) Translates to: GSDRIYKARKDSQAKQTSWEGGR*RRQSTV Trigger: CACTGTACTCTGTCGCCTTCAGCGACCACCTTCCCA...GCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCCTTGTATATCCTATCTGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR CAA 90 bp | AGAAGGTTAAACCGCAGTGTTTGTCCTTGTGTCTCCTGTTTACCTTaGGGCACGTATGGGAAGGTGGTCGCTGAAGGCGACAGAGTACAG | + |
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Preference number: 2 (lower is better) Translates to: RRLNRSVCPCVSCLP*GTYGKVVAEGDRVQ Trigger: CTGTACTCTGTCGCCTTCAGCGACCACCTTCCCATACGTGCCCAAAGGTAAACAGGAGACACAAGGACAAACACTGCGGTTTAACCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGAGGCGACAGAGTACAGTaGTGGTTTTGTTTCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: TRPGKTARQSKRAEQSSRGDRVQ*WFCFIW Trigger: CCAGATGAAACAAAACCACCACTGTACTCTGTCGCC...TCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR CAA 90 bp | GGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATaGCTCCAAAATCAACCGACTGCTCTGCACTCAACTCAAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GKTARQSKRAEQSSR*LQNQPTALHSTQKA Trigger: GGCTTTTTGAGTTGAGTGCAGAGCAGTCGGTTGATTTTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCGACAGAGTACAGTGGTGGTTTTGTTTCATCTGGAAAGTGTAAGGAGAGAGTTAAACAGTGGAGTCTaGCACGGGTTCCTTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: RRQSTVVVLFHLESVRRELNSGV*HGFLQV Trigger: CACCTGAAGGAACCCGTGTCAGACTCCACTGTTTAA...CTCTCTCCTTACACTTTCCAGATGAAACAAAACCACCACTGTACTCTGTCGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR TCA 72 bp | GAGGTGCCTCTGAGTTCTGCTTTAAACAGTGGAGTCTaGCACGGGTTCCTTCAGGTGTTAGGGCCTCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: EVPLSSALNSGV*HGFLQVLGPLH Trigger: ATGGAGAGGCCCTAACACCTGAAGGAACCCGTGTCAGACTCCACTGTTTAAAGCAGAACTCAGAGGCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR CCA 72 bp | CATCTAGGAGGTGCCTCTGAGTTCTGCTTTAAACAGTaGAGTCTGACACGGGTTCCTTCAGGTGTTAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: HLGGASEFCFKQ*SLTRVPSGVRA Trigger: GGCCCTAACACCTGAAGGAACCCGTGTCAGACTCCACTGTTTAAAGCAGAACTCAGAGGCACCTCCTAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR CCA 72 bp | GTGTCTCCTGTTTACCTTTGGGCACGTATGGGAAGGTaGTCGCTGAAGGCGACAGAGTACAGTGGTGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: VSPVYLWARMGR*SLKATEYSGGF Trigger: AAAACCACCACTGTACTCTGTCGCCTTCAGCGACCACCTTCCCATACGTGCCCAAAGGTAAACAGGAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCTCCAAGTCTCCTGTTTACCTTaGGGCACGTATGGGAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: GKTARQSKRAEQSSRLLQVSCLP*GTYGKV Trigger: CACCTTCCCATACGTGCCCAAAGGTAAACAGGAGAC...TTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR GCA 72 bp | CCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTaGTCCAAAATCAACCGACTGCTCTGCACTCAACTC | + |
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Preference number: 3 (lower is better) Translates to: PGKANEQSRVLD*SKINRLLCTQL Trigger: GAGTTGAGTGCAGAGCAGTCGGTTGATTTTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR TCA 72 bp | GTTTTGTTTCATCTGGAAAGTGTAAGGAGAGAGATTTaGTCCTATCCCTTTCAAAACACTGCAGCTGAGATC | + |
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Preference number: 3 (lower is better) Translates to: VLFHLESVRREI*SYPFQNTAAEI Trigger: GATCTCAGCTGCAGTGTTTTGAAAGGGATAGGATCAAATCTCTCTCCTTACACTTTCCAGATGAAACAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR TCA 90 bp | GGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCCTGGGGATCTGGTGGTaGGGGTGCGCGGGCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GQERQPGKANEQSRVLDCLGIWW*GCAGGR Trigger: TCTGCCGCCCGCGCACCCTCACCACCAGATCCCCAG...GCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | GGCACGTATGGGAAGGTGGTCGCTGAAGGCGACAGAGTACAGTGGTGGTTTTGTTGCCCTGCGCCAGGCTaGAGCAGAAGCCGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GTYGKVVAEGDRVQWWFCCPAPG*SRSRWA Trigger: TGCCCACCGGCTTCTGCTCCAGCCTGGCGCAGGGCA...ACAAAACCACCACTGTACTCTGTCGCCTTCAGCGACCACCTTCCCATACGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | GGCTCAGATAGGATATACAAGGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCGCCGCCGCCTCTTGGTaGTGGGGCGACGCAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GSDRIYKARKDSQAKQTSAAASW*WGDAEK Trigger: CTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGC...GCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCCTTGTATATCCTATCTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR TCA 90 bp | GGCACGTATGGGAAGGTGGTCGCTGAAGGCGACAGAGTACAGTGGTGGTTTTGTTGGCGTTGCCTGCCTTaGCACGTTTCCACTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GTYGKVVAEGDRVQWWFCWRCLP*HVSTWP Trigger: GGGCCAAGTGGAAACGTGTCAAGGCAGGCAACGCCA...ACAAAACCACCACTGTACTCTGTCGCCTTCAGCGACCACCTTCCCATACGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | ACAAGGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGAGCTGTGGAGCGAACTTaGGGGCAGCCGCCGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: TRPGKTARQSKRAEQSSRAVERT*GQPPPL Trigger: AAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGC...TCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | ATAGGATATACAAGGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGGCCGCCGCCGGTTCTTaGCTGTGGACGTGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IGYTRPGKTARQSKRAEQAAAGS*LWTWCC Trigger: GCAGCACCACGTCCACAGGCAAGAACCGGCGGCGGC...CTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCCTTGTATATCCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | CTTGGATGTCCACATCTAGGAGGTGCCTCTGAGTTCTGCTTTAAACAGTGGAGTCGAAATGGCCGGGACTaGGCTGCGGCGGGCTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LGCPHLGGASEFCFKQWSRNGRD*AAAGCR Trigger: TCGGCAGCCCGCCGCAGCCCAGTCCCGGCCATTTCG...ACTCCACTGTTTAAAGCAGAACTCAGAGGCACCTCCTAGATGTGGACATCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | TTAAACCGCAGTGTTTGTCCTTGTGTCTCCTGTTTACCTTTGGGCACGTATGGGGCAGCCGCCGCCTCTTaGTGCTGGGGCGACGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LNRSVCPCVSCLPLGTYGAAAAS*CWGDAE Trigger: CTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGC...CCCATACGTGCCCAAAGGTAAACAGGAGACACAAGGACAAACACTGCGGTTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | GGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCTCCAAGCCGCCTCCGGGCAGTaGCTGTGGAGCGAACTTGCG | + |
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Preference number: 4 (lower is better) Translates to: GKTARQSKRAEQSSRLLQAASGQ*LWSELA Trigger: CGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGC...TTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | GGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCTCCAACGGGGTCTCCTCCAGTaGGTGGCCGGGGTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GKTARQSKRAEQSSRLLQRGLLQ*VAGVFF Trigger: GAAGAAGACCCCGGCCACGCACTGGAGGAGACCCCG...TTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | GGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCCTGAGTTTGAGGGCGTaGGCGATCTGTGAGCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: GQERQPGKANEQSRVLDCLSLRA*AICERS Trigger: CGAGCGCTCACAGATCGCCCACGCCCTCAAACTCAG...GCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | AGAAGGTTAAACCGCAGTGTTTGTCCTTGTGTCTCCTGTTTACCTTTGGGCACGCTGTGGACGTGGTGCTaGCTGCTGCACCGCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RRLNRSVCPCVSCLPLGTLWTWC*LLHRRS Trigger: AGAGCGGCGGTGCAGCAGGCAGCACCACGTCCACAG...CGTGCCCAAAGGTAAACAGGAGACACAAGGACAAACACTGCGGTTTAACCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | ATAGGATATACAAGGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGTGGAGCAGAAGCCGGTaGGCAGGCTGGGGATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: IGYTRPGKTARQSKRAEQWSRSR*AGWGSG Trigger: ACCAGATCCCCAGCCTGCCCACCGGCTTCTGCTCCA...CTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCCTTGTATATCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | AGAAGGTTAAACCGCAGTGTTTGTCCTTGTGTCTCCTGTTTACCTTTGGGCACGTCCGGGCAGTGGCTGTaGAGCGAACTTGCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RRLNRSVCPCVSCLPLGTSGQWL*SELAGS Trigger: GCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGA...CGTGCCCAAAGGTAAACAGGAGACACAAGGACAAACACTGCGGTTTAACCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | GGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCGTCTCCTCCAGTGCGTaGCCGGGGTCTTCTTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: GQERQPGKANEQSRVLDCVSSSA*PGSSSL Trigger: TAAGGAAGAAGACCCCGGCCACGCACTGGAGGAGAC...GCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | ATAGGATATACAAGGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGGCCGGTTCTTGCCTGTaGACGTGGTGCTGCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IGYTRPGKTARQSKRAEQAGSCL*TWCCLL Trigger: CAGCAGGCAGCACCACGTCCACAGGCAAGAACCGGC...CTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCCTTGTATATCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | TCGCTGAAGGCGACAGAGTACAGTGGTGGTTTTGTTTCATCTGGAAAGTGTAAGTGGGCTGCGGCGGGCTaGCGATCAGCGAGTCTATGC | + |
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Preference number: 4 (lower is better) Translates to: SLKATEYSGGFVSSGKCKWAAAG*RSASLC Trigger: GCATAGACTCGCTGATCGGCAGCCCGCCGCAGCCCA...CTTACACTTTCCAGATGAAACAAAACCACCACTGTACTCTGTCGCCTTCAGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | CAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCTCCAAAATCAACCGGCTTTGTCGAAGTTaGCGCCTCCGGGCAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QPGKANEQSRVLDCSKINRLCRS*RLRAVA Trigger: AGCCACTGCCCGGAGGCGGCAACTTCGACAAAGCCG...GTTGATTTTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | GGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCTCCAATGGGGACGACAATCTTaGGGTTCCGAGAGGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GKTARQSKRAEQSSRLLQWGRQS*GSERAP Trigger: GGGAGCCCTCTCGGAACCCCAAGATTGTCGTCCCCA...TTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR CAA 72 bp | AACCGCAGTGTTTGTCCTTGTGTCTCCTGTTTACCTTaGGGCACGTATGGGAAGGTGGTCGCTGAAGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: NRSVCPCVSCLP*GTYGKVVAEGD Trigger: GTCGCCTTCAGCGACCACCTTCCCATACGTGCCCAAAGGTAAACAGGAGACACAAGGACAAACACTGCGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | AGGCGACAGAGTACAGTGGTGGTTTTGTTTCATCTGGAAAGTGTAAGGAGAGAGGACTCGTCTTTCCCTTaGCCTCGGACAGCCCCGACG | + |
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Preference number: 4 (lower is better) Translates to: RRQSTVVVLFHLESVRREDSSFP*PRTAPT Trigger: CGTCGGGGCTGTCCGAGGGCAAGGGAAAGACGAGTC...CTCTCTCCTTACACTTTCCAGATGAAACAAAACCACCACTGTACTCTGTCGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | AAACAGTGGAGTCTGACACGGGTTCCTTCAGGTGTTAGGGCCTCTCCATGGTGGGGAATTGGCGTTGCCTaGCTTGACACGTTTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: KQWSLTRVPSGVRASPWWGIGVA*LDTFPL Trigger: AAGTGGAAACGTGTCAAGGCAGGCAACGCCAATTCC...CCACCATGGAGAGGCCCTAACACCTGAAGGAACCCGTGTCAGACTCCACTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | AGAAGGTTAAACCGCAGTGTTTGTCCTTGTGTCTCCTGTTTACCTTTGGGCACGGCAGCGAGCCCTCCTTaGCCAAGAAGGCTTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: RRLNRSVCPCVSCLPLGTAASPP*PRRLCR Trigger: ACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGC...CGTGCCCAAAGGTAAACAGGAGACACAAGGACAAACACTGCGGTTTAACCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR TCA 90 bp | CAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCTCCAAAATCAACGCGAACCTGCTAACGTaGACAGGGATGGGGACGACA | + |
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Preference number: 4 (lower is better) Translates to: QPGKANEQSRVLDCSKINANLLT*TGMGTT Trigger: TGTCGTCCCCATCCCTGTTCACGTTAGCAGGTTCGC...GTTGATTTTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | GGCTCAGATAGGATATACAAGGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAAGCTCTCCTCCTTaGCCTTCGGGTCATCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GSDRIYKARKDSQAKQTSRSSPP*PSGHLP Trigger: TGGAAGATGACCCGAAGGGCAAGGAGGAGAGCTTCT...GCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCCTTGTATATCCTATCTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CCA 90 bp | ATCCCTTTCAAAACACTGCAGCTGAGATCCAGTCTAGATAGAGATCTATGTACAGCCGCCTCTTGGTGCTaGGGCGACGCAGAGAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: IPFKTLQLRSSLDRDLCTAASWC*GDAEKP Trigger: CGGCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGC...TGTACATAGATCTCTATCTAGACTGGATCTCAGCTGCAGTGTTTTGAAAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | ATCCCTTTCAAAACACTGCAGCTGAGATCCAGTCTAGATAGAGATCTATGTACACTCCCCAGCGGGCGCTaGATCATCATCAGCGACGGC | + |
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Preference number: 4 (lower is better) Translates to: IPFKTLQLRSSLDRDLCTLPSGR*IIISDG Trigger: GCCGTCGCTGATGATGATGCAGCGCCCGCTGGGGAG...TGTACATAGATCTCTATCTAGACTGGATCTCAGCTGCAGTGTTTTGAAAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR TCA 90 bp | CTGAAGGCGACAGAGTACAGTGGTGGTTTTGTTTCATCTGGAAAGTGTAAGGAGTCAGCGAGTCTATGCTaGAGGCGGTACTACTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LKATEYSGGFVSSGKCKESASLC*RRYYSP Trigger: TGGGGAGTAGTACCGCCTTCAGCATAGACTCGCTGA...CTCCTTACACTTTCCAGATGAAACAAAACCACCACTGTACTCTGTCGCCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR GCA 90 bp | AAACAGTGGAGTCTGACACGGGTTCCTTCAGGTGTTAGGGCCTCTCCATGGTGGAACCAGATTTTTACTTaGACCTCGCTGAGTTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: KQWSLTRVPSGVRASPWWNQIFT*TSLSLR Trigger: CCTCAAACTCAGCGAGGTGCAAGTAAAAATCTGGTT...CCACCATGGAGAGGCCCTAACACCTGAAGGAACCCGTGTCAGACTCCACTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| 3UTR CAA 72 bp | GCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATaGCTCCAAAATCAACCGACTGCTCTGCACTCAACT | + |
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Preference number: 4 (lower is better) Translates to: ARQSKRAEQSSR*LQNQPTALHST Trigger: AGTTGAGTGCAGAGCAGTCGGTTGATTTTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR TCA 90 bp | GAATATACTCTCAATTTGCTTGGATGTCCACATCTAGGAGGTGCCTCTGAGTTCAGGCAAATTGTCATCTaGGCTGTAATCCACATCGCT | + |
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Preference number: 4 (lower is better) Translates to: EYTLNLLGCPHLGGASEFRQIVI*AVIHIA Trigger: AGCGATGTGGATTACAGCTCAGATGACAATTTGCCT...GAACTCAGAGGCACCTCCTAGATGTGGACATCCAAGCAAATTGAGAGTATATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 90 bp | GGCAGTCCGCCGCCGCCGGTTCTTGCCTGTGGACGTGGTGCTGCCTaGTGCACCGCCGCTCTGCGGGGTCTCCTCCAGTGCGTGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSPPPPVLACGRGAA*CTAALRGLLQCVAG Trigger: CCCGGCCACGCACTGGAGGAGACCCCGCAGAGCGGCGGTGCAGCAGGCAGCACCACGTCCACAGGCAAGAACCGGCGGCGGCGGACTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 90 bp | AGTCCGCCGCCGCCGGTTCTTGCCTGTGGACGTGGTGCTGCCTGCTaGACCGCCGCTCTGCGGGGTCTCCTCCAGTGCGTGGCCGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPPPPVLACGRGAAC*TAALRGLLQCVAGV Trigger: GACCCCGGCCACGCACTGGAGGAGACCCCGCAGAGCGGCGGTGCAGCAGGCAGCACCACGTCCACAGGCAAGAACCGGCGGCGGCGGACT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 90 bp | CCGGGCAGTGGCTGTGGAGCGAACTTGCGGGCAGCCGCCGCCTCTTaGTGCTGGGGCGACGCAGAGAAGCCGCCGGGCAGAGTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PGSGCGANLRAAAAS*CWGDAEKPPGRVAM Trigger: CATGGCCACTCTGCCCGGCGGCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 90 bp | GGCAGTGGCTGTGGAGCGAACTTGCGGGCAGCCGCCGCCTCTTGGTaGTGGGGCGACGCAGAGAAGCCGCCGGGCAGAGTGGCCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSGCGANLRAAAASW*WGDAEKPPGRVAMS Trigger: GCTCATGGCCACTCTGCCCGGCGGCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 90 bp | AGTGGCTGTGGAGCGAACTTGCGGGCAGCCGCCGCCTCTTGGTGCTaGGGCGACGCAGAGAAGCCGCCGGGCAGAGTGGCCATGAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGCGANLRAAAASWC*GDAEKPPGRVAMSV Trigger: CACGCTCATGGCCACTCTGCCCGGCGGCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 90 bp | GAGCGCCTCGGCTTTGTCGAAGTTGCCGCCTCCGGGCAGTGGCTGTaGAGCGAACTTGCGGGCAGCCGCCGCCTCTTGGTGCTGGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ERLGFVEVAASGQWL*SELAGSRRLLVLGR Trigger: TCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAAAGCCGAGGCGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 90 bp | CGCTTGGAGCGCCTCGGCTTTGTCGAAGTTGCCGCCTCCGGGCAGTaGCTGTGGAGCGAACTTGCGGGCAGCCGCCGCCTCTTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLERLGFVEVAASGQ*LWSELAGSRRLLVL Trigger: CAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAAAGCCGAGGCGCTCCAAGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS TCA 90 bp | GGCCGGGACTGGGCTGCGGCGGGCTGCCGATCAGCGAGTCTATGCTaGAGGCGGTACTACTCCCCAGCGGGCGCTGCATCATCATCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GRDWAAAGCRSASLC*RRYYSPAGAASSSA Trigger: CGCTGATGATGATGCAGCGCCCGCTGGGGAGTAGTACCGCCTTCAGCATAGACTCGCTGATCGGCAGCCCGCCGCAGCCCAGTCCCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 90 bp | CTTTGTCGAAGTTGCCGCCTCCGGGCAGTGGCTGTGGAGCGAACTTaGGGGCAGCCGCCGCCTCTTGGTGCTGGGGCGACGCAGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCRSCRLRAVAVERT*GQPPPLGAGATQRS Trigger: GCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 90 bp | TGCCGTCTTCCGCATCCGCTTGGAGCGCCTCGGCTTTGTCGAAGTTaGCGCCTCCGGGCAGTGGCTGTGGAGCGAACTTGCGGGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CRLPHPLGAPRLCRS*RLRAVAVERTCGQP Trigger: CGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAAAGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 90 bp | CGTGGTGCTGCCTGCTGCACCGCCGCTCTGCGGGGTCTCCTCCAGTaGGTGGCCGGGGTCTTCTTCCTTATGAGCAGTCTGACCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RGAACCTAALRGLLQ*VAGVFFLMSSLTRQ Trigger: TTGCCTGGTCAGACTGCTCATAAGGAAGAAGACCCCGGCCACGCACTGGAGGAGACCCCGCAGAGCGGCGGTGCAGCAGGCAGCACCACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 90 bp | GAGCCCTCCTTGGCCAAGAAGGCTTTGCCGTCTTCCGCATCCGCTTaGAGCGCCTCGGCTTTGTCGAAGTTGCCGCCTCCGGGCAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPSLAKKALPSSASA*SASALSKLPPPGSG Trigger: GCCACTGCCCGGAGGCGGCAACTTCGACAAAGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 90 bp | CCTGCACCGCTTCGGCCGCAGAGAAAGCGAGCAGCGAGCCCTCCTTaGCCAAGAAGGCTTTGCCGTCTTCCGCATCCGCTTGGAGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PAPLRPQRKRAASPP*PRRLCRLPHPLGAP Trigger: AGGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGCTCGCTTTCTCTGCGGCCGAAGCGGTGCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 90 bp | TCCTTGCCCTTCGGGTCATCTTCCACCTTTGACTCGTCTTTCCCTTaGCCTCGGACAGCCCCGACGAGCGACGCCTGCACCGCTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLPFGSSSTFDSSFP*PRTAPTSDACTASA Trigger: GGCCGAAGCGGTGCAGGCGTCGCTCGTCGGGGCTGTCCGAGGGCAAGGGAAAGACGAGTCAAAGGTGGAAGATGACCCGAAGGGCAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 90 bp | CCGCAGAGAAAGCGAGCAGCGAGCCCTCCTTGGCCAAGAAGGCTTTaGCGTCTTCCGCATCCGCTTGGAGCGCCTCGGCTTTGTCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PQRKRAASPPWPRRL*RLPHPLGAPRLCRS Trigger: ACTTCGACAAAGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGCTCGCTTTCTCTGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | GGCACGTATGGGAAGGTGGTCGCTGAAGGCGACAGAGTACAGTGGTGGTTTTGTCGCCGCCGCCGGTTCTaGCCTGTGGACGTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTYGKVVAEGDRVQWWFCRRRRF*PVDVVL Trigger: CAGCACCACGTCCACAGGCAAGAACCGGCGGCGGCG...ACAAAACCACCACTGTACTCTGTCGCCTTCAGCGACCACCTTCCCATACGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS TCA 90 bp | CAGAGAGAAGCTCTCCTCCTTGCCCTTCGGGTCATCTTCCACCTTTaGCTCGTCTTTCCCTTGCCCTCGGACAGCCCCGACGAGCGACGC | + |
|
Preference number: 5 (lower is better) Translates to: QREALLLALRVIFHL*LVFPLPSDSPDERR Trigger: GCGTCGCTCGTCGGGGCTGTCCGAGGGCAAGGGAAAGACGAGTCAAAGGTGGAAGATGACCCGAAGGGCAAGGAGGAGAGCTTCTCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | AAACAGTGGAGTCTGACACGGGTTCCTTCAGGTGTTAGGGCCTCTCCATGGTGGGAGGGCTCCCCCGTCTaGGAATTGGCGTTGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQWSLTRVPSGVRASPWWEGSPV*ELALPA Trigger: GGCAGGCAACGCCAATTCCAAGACGGGGGAGCCCTC...CCACCATGGAGAGGCCCTAACACCTGAAGGAACCCGTGTCAGACTCCACTGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | AGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCTCCAAAATCAACCGACTGGCAGCCGCCGCCTCTaGGTGCTGGGGCGACGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RQSKRAEQSSRLLQNQPTGSRRL*VLGRRR Trigger: TCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCC...AGTCGGTTGATTTTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | AAACAGTGGAGTCTGACACGGGTTCCTTCAGGTGTTAGGGCCTCTCCATGGTGGGAGAAGCTCTCCTCCTaGCCCTTCGGGTCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQWSLTRVPSGVRASPWWEKLSS*PFGSSS Trigger: GGAAGATGACCCGAAGGGCAAGGAGGAGAGCTTCTC...CCACCATGGAGAGGCCCTAACACCTGAAGGAACCCGTGTCAGACTCCACTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | GGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGATTGCTCCAATCCCCCGTCTTGGAATaGGCGTTGCCTGCCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: GKTARQSKRAEQSSRLLQSPVLE*ALPALT Trigger: TGTCAAGGCAGGCAACGCCAATTCCAAGACGGGGGA...TTGGAGCAATCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | GAATATACTCTCAATTTGCTTGGATGTCCACATCTAGGAGGTGCCTCTGAGTTCAGCAGCGAGCCCTCCTaGGCCAAGAAGGCTTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: EYTLNLLGCPHLGGASEFSSEPS*AKKALP Trigger: CGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGCT...GAACTCAGAGGCACCTCCTAGATGTGGACATCCAAGCAAATTGAGAGTATATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | ACAAGGCCAGGAAAGACAGCCAGGCAAAGCAAACGAGCAGAGCAGAGTTCTAGAGGTCATCTTCCACCTTaGACTCGTCTTTCCCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRPGKTARQSKRAEQSSRGHLPP*TRLSLA Trigger: GGCAAGGGAAAGACGAGTCAAAGGTGGAAGATGACC...TCTAGAACTCTGCTCTGCTCGTTTGCTTTGCCTGGCTGTCTTTCCTGGCCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | GAATATACTCTCAATTTGCTTGGATGTCCACATCTAGGAGGTGCCTCTGAGTTCTTGACACGTTTCCACTaGGCCCGGCGGTTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EYTLNLLGCPHLGGASEFLTRFH*ARRFWN Trigger: GTTCCAGAACCGCCGGGCCAAGTGGAAACGTGTCAA...GAACTCAGAGGCACCTCCTAGATGTGGACATCCAAGCAAATTGAGAGTATATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | AGAAGGTTAAACCGCAGTGTTTGTCCTTGTGTCTCCTGTTTACCTTTGGGCACGGTCTTGGAATTGGCGTaGCCTGCCTTGACACGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRLNRSVCPCVSCLPLGTVLELA*PALTRF Trigger: GAAACGTGTCAAGGCAGGCAACGCCAATTCCAAGAC...CGTGCCCAAAGGTAAACAGGAGACACAAGGACAAACACTGCGGTTTAACCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | CTTGGATGTCCACATCTAGGAGGTGCCTCTGAGTTCTGCTTTAAACAGTGGAGTCTCCAGCTGCTGGTGTaGACTTCGAATAGCGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LGCPHLGGASEFCFKQWSLQLLV*TSNSEP Trigger: AGGTTCGCTATTCGAAGTCAACACCAGCAGCTGGAG...ACTCCACTGTTTAAAGCAGAACTCAGAGGCACCTCCTAGATGTGGACATCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | ATCCCTTTCAAAACACTGCAGCTGAGATCCAGTCTAGATAGAGATCTATGTACAATGGGGACGACAATCTaGGGGTTCCGAGAGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IPFKTLQLRSSLDRDLCTMGTTI*GFREGS Trigger: GGAGCCCTCTCGGAACCCCAAGATTGTCGTCCCCAT...TGTACATAGATCTCTATCTAGACTGGATCTCAGCTGCAGTGTTTTGAAAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS-3UTR CAA 90 bp | GAATATACTCTCAATTTGCTTGGATGTCCACATCTAGGAGGTGCCTCTGAGTTCGAACCAGATTTTTACTaGCACCTCGCTGAGTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EYTLNLLGCPHLGGASEFEPDFY*HLAEFE Trigger: CTCAAACTCAGCGAGGTGCAAGTAAAAATCTGGTTC...GAACTCAGAGGCACCTCCTAGATGTGGACATCCAAGCAAATTGAGAGTATATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 72 bp | GGAGCGAACTTGCGGGCAGCCGCCGCCTCTTGGTGCTaGGGCGACGCAGAGAAGCCGCCGGGCAGAGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GANLRAAAASWC*GDAEKPPGRVA Trigger: GGCCACTCTGCCCGGCGGCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 72 bp | AGTTGCCGCCTCCGGGCAGTGGCTGTGGAGCGAACTTaGGGGCAGCCGCCGCCTCTTGGTGCTGGGGCGACG | + |
|
Preference number: 6 (lower is better) Translates to: SCRLRAVAVERT*GQPPPLGAGAT Trigger: CGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 72 bp | CCGCCGCCGGTTCTTGCCTGTGGACGTGGTGCTGCCTaGTGCACCGCCGCTCTGCGGGGTCTCCTCCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPPVLACGRGAA*CTAALRGLLQC Trigger: GCACTGGAGGAGACCCCGCAGAGCGGCGGTGCAGCAGGCAGCACCACGTCCACAGGCAAGAACCGGCGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 72 bp | GGCTGTGGAGCGAACTTGCGGGCAGCCGCCGCCTCTTaGTGCTGGGGCGACGCAGAGAAGCCGCCGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GCGANLRAAAAS*CWGDAEKPPGR Trigger: TCTGCCCGGCGGCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 72 bp | AGGCAGTCCGCCGCCGCCGGTTCTTGCCTGTGGACGTaGTGCTGCCTGCTGCACCGCCGCTCTGCGGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RQSAAAGSCLWT*CCLLHRRSAGS Trigger: AGACCCCGCAGAGCGGCGGTGCAGCAGGCAGCACCACGTCCACAGGCAAGAACCGGCGGCGGCGGACTGCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 72 bp | TGGCTGTGGAGCGAACTTGCGGGCAGCCGCCGCCTCTaGGTGCTGGGGCGACGCAGAGAAGCCGCCGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WLWSELAGSRRL*VLGRRREAAGQ Trigger: CTGCCCGGCGGCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 90 bp | TCCGGGCAGTGGCTGTGGAGCGAACTTGCGGGCAGCCGCCGCCTCTaGGTGCTGGGGCGACGCAGAGAAGCCGCCGGGCAGAGTGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SGQWLWSELAGSRRL*VLGRRREAAGQSGH Trigger: ATGGCCACTCTGCCCGGCGGCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 72 bp | TGTGGAGCGAACTTGCGGGCAGCCGCCGCCTCTTGGTaGTGGGGCGACGCAGAGAAGCCGCCGGGCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CGANLRAAAASW*WGDAEKPPGRV Trigger: CACTCTGCCCGGCGGCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 72 bp | CCTGTGGACGTGGTGCTGCCTGCTGCACCGCCGCTCTaGGGGGTCTCCTCCAGTGCGTGGCCGGGGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PVDVVLPAAPPL*GVSSSAWPGSS Trigger: AGAAGACCCCGGCCACGCACTGGAGGAGACCCCGCAGAGCGGCGGTGCAGCAGGCAGCACCACGTCCACAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 72 bp | CCGCCGGTTCTTGCCTGTGGACGTGGTGCTGCCTGCTaGACCGCCGCTCTGCGGGGTCTCCTCCAGTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PPVLACGRGAAC*TAALRGLLQCV Trigger: CACGCACTGGAGGAGACCCCGCAGAGCGGCGGTGCAGCAGGCAGCACCACGTCCACAGGCAAGAACCGGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 72 bp | CGCCTCGGCTTTGTCGAAGTTGCCGCCTCCGGGCAGTaGCTGTGGAGCGAACTTGCGGGCAGCCGCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLGFVEVAASGQ*LWSELAGSRRL Trigger: GAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAAAGCCGAGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 72 bp | AAGTTGCCGCCTCCGGGCAGTGGCTGTGGAGCGAACTaGCGGGCAGCCGCCGCCTCTTGGTGCTGGGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: KLPPPGSGCGAN*RAAAASWCWGD Trigger: GTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 90 bp | GCTTTGTCGAAGTTGCCGCCTCCGGGCAGTGGCTGTGGAGCGAACTaGCGGGCAGCCGCCGCCTCTTGGTGCTGGGGCGACGCAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALSKLPPPGSGCGAN*RAAAASWCWGDAEK Trigger: CTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 72 bp | GGCTTTGTCGAAGTTGCCGCCTCCGGGCAGTGGCTGTaGAGCGAACTTGCGGGCAGCCGCCGCCTCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GFVEVAASGQWL*SELAGSRRLLV Trigger: CACCAAGAGGCGGCGGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAAAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 90 bp | TTGCCGTCTTCCGCATCCGCTTGGAGCGCCTCGGCTTTGTCGAAGTaGCCGCCTCCGGGCAGTGGCTGTGGAGCGAACTTGCGGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPSSASAWSASALSK*PPPGSGCGANLRAA Trigger: GGCTGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAAAGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 90 bp | GCCTGCACCGCTTCGGCCGCAGAGAAAGCGAGCAGCGAGCCCTCCTaGGCCAAGAAGGCTTTGCCGTCTTCCGCATCCGCTTGGAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ACTASAAEKASSEPS*AKKALPSSASAWSA Trigger: GGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGCTCGCTTTCTCTGCGGCCGAAGCGGTGCAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS TCA 72 bp | TGGGCTGCGGCGGGCTGCCGATCAGCGAGTCTATGCTaGAGGCGGTACTACTCCCCAGCGGGCGCTGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: WAAAGCRSASLC*RRYYSPAGAAS Trigger: TGATGCAGCGCCCGCTGGGGAGTAGTACCGCCTTCAGCATAGACTCGCTGATCGGCAGCCCGCCGCAGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 72 bp | CCGCATCCGCTTGGAGCGCCTCGGCTTTGTCGAAGTTaGCGCCTCCGGGCAGTGGCTGTGGAGCGAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PHPLGAPRLCRS*RLRAVAVERTC Trigger: GCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAAAGCCGAGGCGCTCCAAGCGGATGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 72 bp | GCCTGCTGCACCGCCGCTCTGCGGGGTCTCCTCCAGTaGGTGGCCGGGGTCTTCTTCCTTATGAGCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ACCTAALRGLLQ*VAGVFFLMSSL Trigger: CAGACTGCTCATAAGGAAGAAGACCCCGGCCACGCACTGGAGGAGACCCCGCAGAGCGGCGGTGCAGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 90 bp | CGAGCCCTCCTTGGCCAAGAAGGCTTTGCCGTCTTCCGCATCCGCTaGGAGCGCCTCGGCTTTGTCGAAGTTGCCGCCTCCGGGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RALLGQEGFAVFRIR*ERLGFVEVAASGQW Trigger: CCACTGCCCGGAGGCGGCAACTTCGACAAAGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 72 bp | GGGTTCCGAGAGGGCTCCCCCGTCTTGGAATTGGCGTaGCCTGCCTTGACACGTTTCCACTTGGCCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GFREGSPVLELA*PALTRFHLARR Trigger: CCGCCGGGCCAAGTGGAAACGTGTCAAGGCAGGCAACGCCAATTCCAAGACGGGGGAGCCCTCTCGGAACCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 72 bp | TCTATGCTGAAGGCGGTACTACTCCCCAGCGGGCGCTaGATCATCATCAGCGACGGCGGGAACGCTGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: SMLKAVLLPSGR*IIISDGGNAAL Trigger: GAGCGCAGCGTTCCCGCCGTCGCTGATGATGATGCAGCGCCCGCTGGGGAGTAGTACCGCCTTCAGCATAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 72 bp | AAGCGAGCAGCGAGCCCTCCTTGGCCAAGAAGGCTTTaGCGTCTTCCGCATCCGCTTGGAGCGCCTCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: KRAASPPWPRRL*RLPHPLGAPRL Trigger: AAGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGCTCGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 72 bp | AAAGCGAGCAGCGAGCCCTCCTTGGCCAAGAAGGCTTaGCCGTCTTCCGCATCCGCTTGGAGCGCCTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: KASSEPSLAKKA*PSSASAWSASA Trigger: AGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGCTCGCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 90 bp | GCCGCAGAGAAAGCGAGCAGCGAGCCCTCCTTGGCCAAGAAGGCTTaGCCGTCTTCCGCATCCGCTTGGAGCGCCTCGGCTTTGTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: AAEKASSEPSLAKKA*PSSASAWSASALSK Trigger: CTTCGACAAAGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGCTCGCTTTCTCTGCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS GCA 72 bp | TTCGGGTCATCTTCCACCTTTGACTCGTCTTTCCCTTaGCCTCGGACAGCCCCGACGAGCGACGCCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: FGSSSTFDSSFP*PRTAPTSDACT Trigger: GGTGCAGGCGTCGCTCGTCGGGGCTGTCCGAGGGCAAGGGAAAGACGAGTCAAAGGTGGAAGATGACCCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 72 bp | TTGGCCAAGAAGGCTTTGCCGTCTTCCGCATCCGCTTaGAGCGCCTCGGCTTTGTCGAAGTTGCCGCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: LAKKALPSSASA*SASALSKLPPP Trigger: CGGAGGCGGCAACTTCGACAAAGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CCA 72 bp | CTTCGGCCGCAGAGAAAGCGAGCAGCGAGCCCTCCTTaGCCAAGAAGGCTTTGCCGTCTTCCGCATCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: LRPQRKRAASPP*PRRLCRLPHPL Trigger: AAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGCTCGCTTTCTCTGCGGCCGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 72 bp | CTTGGCCAAGAAGGCTTTGCCGTCTTCCGCATCCGCTaGGAGCGCCTCGGCTTTGTCGAAGTTGCCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LGQEGFAVFRIR*ERLGFVEVAAS Trigger: GGAGGCGGCAACTTCGACAAAGCCGAGGCGCTCCAAGCGGATGCGGAAGACGGCAAAGCCTTCTTGGCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 90 bp | CCAGAGAGAAGCTCTCCTCCTTGCCCTTCGGGTCATCTTCCACCTTaGACTCGTCTTTCCCTTGCCCTCGGACAGCCCCGACGAGCGACG | + |
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Preference number: 6 (lower is better) Translates to: PERSSPPCPSGHLPP*TRLSLALGQPRRAT Trigger: CGTCGCTCGTCGGGGCTGTCCGAGGGCAAGGGAAAGACGAGTCAAAGGTGGAAGATGACCCGAAGGGCAAGGAGGAGAGCTTCTCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS TCA 72 bp | GCTCTCCTCCTTGCCCTTCGGGTCATCTTCCACCTTTaGCTCGTCTTTCCCTTGCCCTCGGACAGCCCCGAC | + |
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Preference number: 6 (lower is better) Translates to: ALLLALRVIFHL*LVFPLPSDSPD Trigger: GTCGGGGCTGTCCGAGGGCAAGGGAAAGACGAGTCAAAGGTGGAAGATGACCCGAAGGGCAAGGAGGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 72 bp | AGCTCTCCTCCTTGCCCTTCGGGTCATCTTCCACCTTaGACTCGTCTTTCCCTTGCCCTCGGACAGCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: SSPPCPSGHLPP*TRLSLALGQPR Trigger: TCGGGGCTGTCCGAGGGCAAGGGAAAGACGAGTCAAAGGTGGAAGATGACCCGAAGGGCAAGGAGGAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 72 bp | ATCTTGGGGTTCCGAGAGGGCTCCCCCGTCTTGGAATaGGCGTTGCCTGCCTTGACACGTTTCCACTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ILGFREGSPVLE*ALPALTRFHLA Trigger: GGCCAAGTGGAAACGTGTCAAGGCAGGCAACGCCAATTCCAAGACGGGGGAGCCCTCTCGGAACCCCAAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS CAA 72 bp | ACGACAATCTTGGGGTTCCGAGAGGGCTCCCCCGTCTaGGAATTGGCGTTGCCTGCCTTGACACGTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TTILGFREGSPV*ELALPALTRFH Trigger: GTGGAAACGTGTCAAGGCAGGCAACGCCAATTCCAAGACGGGGGAGCCCTCTCGGAACCCCAAGATTGTCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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| CDS TCA 72 bp | TTCCTTATGAGCAGTCTGACCAGGCAAATTGTCATCTaGGCTGTAATCCACATCGCTCTCCAGAGAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: FLMSSLTRQIVI*AVIHIALQREA Trigger: AGCTTCTCTCTGGAGAGCGATGTGGATTACAGCTCAGATGACAATTTGCCTGGTCAGACTGCTCATAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036954.9 |
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