Pregenerated sensors for GBP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029298Ensembl transcript IDs: ENSMUST00000031238.13, ENSMUST00000100961.5
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAATACACACTATCAAGCCAGTCAACATCCAGTGTGGAGAGGCAGTaGGCTCATGAGACCCCACCCCTAGCTGAAGAACTACTAGCATTT | + |
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Preference number: 1 (lower is better) Translates to: KYTLSSQSTSSVERQ*AHETPPLAEELLAF Trigger: AAATGCTAGTAGTTCTTCAGCTAGGGGTGGGGTCTCATGAGCTCACTGCCTCTCCACACTGGATGTTGACTGGCTTGATAGTGTGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR CCA 90 bp | TACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACACATAGGATaGGTTCCCTACTGTATTAATCTGAGATACTCCCCCACAAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: YCVFSPQEWSRPHIG*VPYCINLRYSPTSK Trigger: TTTGCTTGTGGGGGAGTATCTCAGATTAATACAGTAGGGAACCCATCCTATGTGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR CCA 90 bp | GAGCGTGTGTTTTCTATGGGGGTGTGCTTCATGATAAATTGTTCATaGTCTGATAGATGGTGTCTAATGCCCAGGGACATGAGGCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: ERVFSMGVCFMINCS*SDRWCLMPRDMRPA Trigger: TGCTGGCCTCATGTCCCTGGGCATTAGACACCATCTATCAGACCATGAACAATTTATCATGAAGCACACCCCCATAGAAAACACACGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR TCA 90 bp | AAAAATGTGTCCTCTAAAGGCAAGCATTGTCTGTACAGCCATGCATaGGCTGTTCTGTTCATGTGTGCAGGACACAGCCACCCTCAAATC | + |
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Preference number: 1 (lower is better) Translates to: KNVSSKGKHCLYSHA*AVLFMCAGHSHPQI Trigger: GATTTGAGGGTGGCTGTGTCCTGCACACATGAACAGAACAGCTCATGCATGGCTGTACAGACAATGCTTGCCTTTAGAGGACACATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR CCA 90 bp | GGAAGATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATaGTCCCGTCCACACATAGGATGGGTTCCCTACTGTATTAATCTG | + |
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Preference number: 1 (lower is better) Translates to: GRLLSSFYCVFSPQE*SRPHIGWVPYCINL Trigger: CAGATTAATACAGTAGGGAACCCATCCTATGTGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCAATCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR GCA 90 bp | GCACTCTTGACAACTGAGCCATCTCTGAGCTGTCCACCTCCCTTGTaGCCCATAGATTCTCTTATACTCTATATTATCATATGTTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ALLTTEPSLSCPPPL*PIDSLILYIIICFL Trigger: TAAGAAACATATGATAATATAGAGTATAAGAGAATCTATGGGGCACAAGGGAGGTGGACAGCTCAGAGATGGCTCAGTTGTCAAGAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR CCA 90 bp | TCTATGGGGGTGTGCTTCATGATAAATTGTTCATGGTCTGATAGATaGTGTCTAATGCCCAGGGACATGAGGCCAGCATTAATTTATTCA | + |
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Preference number: 1 (lower is better) Translates to: SMGVCFMINCSWSDR*CLMPRDMRPALIYS Trigger: TGAATAAATTAATGCTGGCCTCATGTCCCTGGGCATTAGACACCATCTATCAGACCATGAACAATTTATCATGAAGCACACCCCCATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR-3UTR TCA 90 bp | CACAGGATATCAGTACCCATCCAGAGGCTTCCCTGTTCCTTCCACCGAGATTCAAGAACTACTAGCATTTaGTATGTGGTCACTGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: HRISVPIQRLPCSFHRDSRTTSI*YVVTGS Trigger: GCTCCCAGTGACCACATATCAAATGCTAGTAGTTCT...TGAATCTCGGTGGAAGGAACAGGGAAGCCTCTGGATGGGTACTGATATCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR-3UTR TCA 90 bp | ACCCATCCAGAGGCTTCCCTGTTCCTTCCACCGAGATTCATAGAATGTTCATCCGGTCAGAAAAGGAAGTaGGTTCCCTTGGAGTTAGAT | + |
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Preference number: 2 (lower is better) Translates to: THPEASLFLPPRFIECSSGQKRK*VPLELD Trigger: ATCTAACTCCAAGGGAACTCACTTCCTTTTCTGACC...GGATGAACATTCTATGAATCTCGGTGGAAGGAACAGGGAAGCCTCTGGATGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR-3UTR CCA 90 bp | TGGTCTGATAGATGGTGTCTAATGCCCAGGGACATGAGGCCAGCATTAATTTATCTGGTACTCAAGTCTTaGTCTGCGGTGGCTTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: WSDRWCLMPRDMRPALIYLVLKS*SAVAFA Trigger: GGCAAAAGCCACCGCAGACCAAGACTTGAGTACCAG...ATAAATTAATGCTGGCCTCATGTCCCTGGGCATTAGACACCATCTATCAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACACTGTACAGCCATGCATaGGCTGTTCTGTTCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: IAFIFLLCLQSTGMVPSTLYSHA*AVLFMC Trigger: ACACATGAACAGAACAGCTCATGCATGGCTGTACAG...TGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR-3UTR TCA 90 bp | TGGTCTGATAGATGGTGTCTAATGCCCAGGGACATGAGGCCAGCATTAATTTATCTGGATAATGCATTCTaGGAGAAGTCGAGGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: WSDRWCLMPRDMRPALIYLDNAF*EKSRLA Trigger: AGCCAGCCTCGACTTCTCTCAGAATGCATTATCCAG...ATAAATTAATGCTGGCCTCATGTCCCTGGGCATTAGACACCATCTATCAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACACACCCCACAAGCAAACTTaGGCTACATATTCCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: CFHLSTVSSVHRNGPVHTPHKQT*ATYSSK Trigger: CTTTGAGGAATATGTAGCCCAAGTTTGCTTGTGGGG...TGTGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR-3UTR GCA 90 bp | CACAGGATATCAGTACCCATCCAGAGGCTTCCCTGTTCCTTCCACCGAGATTCAGAAAAAGTCATGGAATaGAGGCATCACTTCAACTTT | + |
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Preference number: 2 (lower is better) Translates to: HRISVPIQRLPCSFHRDSEKVME*RHHFNF Trigger: AAAGTTGAAGTGATGCCTGCATTCCATGACTTTTTC...TGAATCTCGGTGGAAGGAACAGGGAAGCCTCTGGATGGGTACTGATATCCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCACAAGTGGTAGGAAGATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCCCCCACAAGCAAACTTaGGCTACATATTCCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: EATSGRKIAFIFLLCLQSPHKQT*ATYSSK Trigger: CTTTGAGGAATATGTAGCCCAAGTTTGCTTGTGGGG...GGACTGAAGACACAGTAGAAAGATGAAAGCAATCTTCCTACCACTTGTGGCTTC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR CAA 90 bp | TGTGCACTCTTGACAACTGAGCCATCTCTGAGCTGTCCACCTCCCTaGTGCCCCATAGATTCTCTTATACTCTATATTATCATATGTTTC | + |
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Preference number: 2 (lower is better) Translates to: CALLTTEPSLSCPPP*CPIDSLILYIIICF Trigger: GAAACATATGATAATATAGAGTATAAGAGAATCTATGGGGCACAAGGGAGGTGGACAGCTCAGAGATGGCTCAGTTGTCAAGAGTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCACAAGTGGTAGGAAGATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCCGTCCACACATAGGATaGGTTCCCTACTGTATTAAT | + |
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Preference number: 2 (lower is better) Translates to: EATSGRKIAFIFLLCLQSRPHIG*VPYCIN Trigger: ATTAATACAGTAGGGAACCCATCCTATGTGTGGACG...GGACTGAAGACACAGTAGAAAGATGAAAGCAATCTTCCTACCACTTGTGGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR-3UTR TCA 90 bp | TTGTTGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGATAATGCATCTGTACAGCCATGCATaGGCTGTTCTGTTCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: LLWSMNHDNTFCQGWIMHLYSHA*AVLFMC Trigger: ACACATGAACAGAACAGCTCATGCATGGCTGTACAG...ATGCATTATCCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR CAA 90 bp | GCTGAGATGAAATACCCTCACAAAACCAACTTAAGAAAGGATTTGTaGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGATA | + |
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Preference number: 2 (lower is better) Translates to: AEMKYPHKTNLRKDL*WSMNHDNTFCQGWI Trigger: TATCCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAAATCCTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATCTCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR CAA 90 bp | AAATGTAAATTCCCTTTCCCAGCACTCTTCATTAAATGTGTAAGATaGAAAAAGTCATGGAATGCAGGCATCACTTCAACTTTTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: KCKFPFPALFIKCVR*KKSWNAGITSTFDS Trigger: GGAGTCAAAAGTTGAAGTGATGCCTGCATTCCATGACTTTTTCAATCTTACACATTTAATGAAGAGTGCTGGGAAAGGGAATTTACATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR TCA 72 bp | AGGCCAGAAAATCTGCCAGTAGATGCTGACCTGCCTTaGCTCTGCCTGGCAGGCAGAAGCAAACAAAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: RPENLPVDADLP*LCLAGRSKQNG Trigger: GCCATTTTGTTTGCTTCTGCCTGCCAGGCAGAGTCAAGGCAGGTCAGCATCTACTGGCAGATTTTCTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR-3UTR CAA 90 bp | ACCCATCCAGAGGCTTCCCTGTTCCTTCCACCGAGATTCATAGAATGTTCATCCAGCTGTCCACCTCCCTaGTGCCCCATAGATTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: THPEASLFLPPRFIECSSSCPPP*CPIDSL Trigger: AAGAGAATCTATGGGGCACAAGGGAGGTGGACAGCT...GGATGAACATTCTATGAATCTCGGTGGAAGGAACAGGGAAGCCTCTGGATGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR CCA 72 bp | TTCAGTCCACAGGAATGGTCCCGTCCACACATAGGATaGGTTCCCTACTGTATTAATCTGAGATACTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: FSPQEWSRPHIG*VPYCINLRYSP Trigger: GGGGGAGTATCTCAGATTAATACAGTAGGGAACCCATCCTATGTGTGGACGGGACCATTCCTGTGGACTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR CCA 72 bp | CAAGGCTGGATAATGCATTCTGAGAGAAGTCGAGGCTaGCTTGTTGTATTGCATCCACAGTCAGGAAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: QGWIMHSERSRG*LVVLHPQSGSH Trigger: GTGGCTTCCTGACTGTGGATGCAATACAACAAGCCAGCCTCGACTTCTCTCAGAATGCATTATCCAGCCTTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR CCA 72 bp | CTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATaGTCCCGTCCACACATAGGATGGGTTCCCTACTGT | + |
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Preference number: 3 (lower is better) Translates to: LSSFYCVFSPQE*SRPHIGWVPYC Trigger: ACAGTAGGGAACCCATCCTATGTGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR CCA 72 bp | GCCTTGACTCTGCCTGGCAGGCAGAAGCAAACAAAATaGCTCCCAATAAAACAGCACCAAGAACTCTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: ALTLPGRQKQTK*LPIKQHQELSF Trigger: AAAGGAGAGTTCTTGGTGCTGTTTTATTGGGAGCCATTTTGTTTGCTTCTGCCTGCCAGGCAGAGTCAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR-3UTR CAA 90 bp | TGGTCTGATAGATGGTGTCTAATGCCCAGGGACATGAGGCCAGCATTAATTTATGGTCTGCGGTGGCTTTaGCCATTTCTAGAAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: WSDRWCLMPRDMRPALIYGLRWL*PFLEAE Trigger: CTCTGCTTCTAGAAATGGCAAAAGCCACCGCAGACC...ATAAATTAATGCTGGCCTCATGTCCCTGGGCATTAGACACCATCTATCAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR CCA 72 bp | AAGCCACAAAAGTTATACTTCCTGGTACTCAAGTCTTaGTCTGCGGTGGCTTTTGCCATTTCTAGAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: KPQKLYFLVLKS*SAVAFAISRSR Trigger: TCTGCTTCTAGAAATGGCAAAAGCCACCGCAGACCAAGACTTGAGTACCAGGAAGTATAACTTTTGTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR CCA 72 bp | GTGTGCTTCATGATAAATTGTTCATGGTCTGATAGATaGTGTCTAATGCCCAGGGACATGAGGCCAGCATTA | + |
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Preference number: 3 (lower is better) Translates to: VCFMINCSWSDR*CLMPRDMRPAL Trigger: TAATGCTGGCCTCATGTCCCTGGGCATTAGACACCATCTATCAGACCATGAACAATTTATCATGAAGCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGGATTTGTTGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGGAAGTCGAGGCTGGCTaGTTGTATTGCATCCACAGT | + |
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Preference number: 3 (lower is better) Translates to: RKDLLWSMNHDNTFCQGWEVEAG*LYCIHS Trigger: ACTGTGGATGCAATACAACAAGCCAGCCTCGACTTC...CCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAAATCCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGTCCACCTCCCTTGTGCCCCATAGATTCTCTTATACTCTATATTATCATTGTGGCATGCATAAATaGTATTGCCTGCCTGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: ELSTSLVPHRFSYTLYYHCGMHK*YCLPVE Trigger: TTCCACAGGCAGGCAATACAATTTATGCATGCCACA...ATGATAATATAGAGTATAAGAGAATCTATGGGGCACAAGGGAGGTGGACAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR GCA 72 bp | ACAACTGAGCCATCTCTGAGCTGTCCACCTCCCTTGTaGCCCATAGATTCTCTTATACTCTATATTATCATA | + |
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Preference number: 3 (lower is better) Translates to: TTEPSLSCPPPL*PIDSLILYIII Trigger: TATGATAATATAGAGTATAAGAGAATCTATGGGGCACAAGGGAGGTGGACAGCTCAGAGATGGCTCAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR CCA 72 bp | TGGTCCATGAATCATGATAATACATTCTGTCAAGGCTaGATAATGCATTCTGAGAGAAGTCGAGGCTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: WSMNHDNTFCQG*IMHSERSRGWL Trigger: AAGCCAGCCTCGACTTCTCTCAGAATGCATTATCCAGCCTTGACAGAATGTATTATCATGATTCATGGACCA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| 3UTR CCA 72 bp | ACCATGGGAAACAAAGTCACAAGGTATCAGAAACAATaGCTGATGTACACACAGGATATCAGTACCCATCCA | + |
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Preference number: 3 (lower is better) Translates to: TMGNKVTRYQKQ*LMYTQDISTHP Trigger: TGGATGGGTACTGATATCCTGTGTGTACATCAGCCATTGTTTCTGATACCTTGTGACTTTGTTTCCCATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR CCA 72 bp | TGCACTAATAAGGGTCCTTGGGTCTCTTTACCTATATaGCCCATTATCAATGTTAACAGTACATTCCTTTAC | + |
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Preference number: 3 (lower is better) Translates to: CTNKGPWVSLPI*PIINVNSTFLY Trigger: GTAAAGGAATGTACTGTTAACATTGATAATGGGCCATATAGGTAAAGAGACCCAAGGACCCTTATTAGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR CCA 72 bp | TACCCTCACAAAACCAACTTAAGAAAGGATTTGTTGTaGTCCATGAATCATGATAATACATTCTGTCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: YPHKTNLRKDLL*SMNHDNTFCQG Trigger: GCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAAATCCTTTCTTAAGTTGGTTTTGTGAGGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR CCA 90 bp | CTGACCTGCCTTGACTCTGCCTGGCAGGCAGAAGCAAACAAAATGGCTCCCAATCCTTCACCCCTTTCCTaGGAACCTGCCAGTAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LTCLDSAWQAEANKMAPNPSPLS*EPASSH Trigger: GTGACTACTGGCAGGTTCCCAGGAAAGGGGTGAAGG...ATTGGGAGCCATTTTGTTTGCTTCTGCCTGCCAGGCAGAGTCAAGGCAGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| CDS-3UTR CCA 90 bp | CAGAAACAATGGCTGATGTACACACAGGATATCAGTACCCATCCAGAGGCTTCCTGTGCTCTGGCTTGGTaGGGTGGGGCATGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: QKQWLMYTQDISTHPEASCALAW*GGACTT Trigger: TGTGGTGCATGCCCCACCCCACCAAGCCAGAGCACA...GGAAGCCTCTGGATGGGTACTGATATCCTGTGTGTACATCAGCCATTGTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| CDS-3UTR CCA 90 bp | ATGTGTGCAGGACACAGCCACCCTCAAATCAGCACTTTTATATTTAACCTTCGCGGGTGTGCTCTGGCTTaGTGGGGTGGGGCATGCACC | + |
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Preference number: 4 (lower is better) Translates to: MCAGHSHPQISTFIFNLRGCALA*WGGACT Trigger: GGTGCATGCCCCACCCCACCAAGCCAGAGCACACCC...GCGAAGGTTAAATATAAAAGTGCTGATTTGAGGGTGGCTGTGTCCTGCACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR CCA 90 bp | CTGTTCATGTGTGCAGGACACAGCCACCCTCAAATCAGCACTTTTATATTTAACGGGTGTGCTCTGGCTTaGTGGGGTGGGGCATGCACC | + |
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Preference number: 4 (lower is better) Translates to: LFMCAGHSHPQISTFIFNGCALA*WGGACT Trigger: GGTGCATGCCCCACCCCACCAAGCCAGAGCACACCC...GTTAAATATAAAAGTGCTGATTTGAGGGTGGCTGTGTCCTGCACACATGAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR TCA 90 bp | ATCCACAGTCAGGAAGCCACAAGTGGTAGGAAGATTGCTTTCATCTTTCTACTGCCTTCTCCCCAGCAGTaGGGGCTCTATCTGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: IHSQEATSGRKIAFIFLLPSPQQ*GLYLPA Trigger: TGCAGGCAGATAGAGCCCTCACTGCTGGGGAGAAGG...CAGTAGAAAGATGAAAGCAATCTTCCTACCACTTGTGGCTTCCTGACTGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR GCA 90 bp | TCGAGGCTGGCTTGTTGTATTGCATCCACAGTCAGGAAGCCACAAGTGGTAGGATGTAGACGAAGGTGCTaGTCAGAAGCACACTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: SRLACCIASTVRKPQVVGCRRRC*SEAHLG Trigger: CCCTAAGTGTGCTTCTGAGCAGCACCTTCGTCTACA...TCCTACCACTTGTGGCTTCCTGACTGTGGATGCAATACAACAAGCCAGCCTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCACAAGTGGTAGGAAGATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCTTGGGCACGCTCCTCTaGAATGGCCTTCTCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EATSGRKIAFIFLLCLQSLGTLL*NGLLPS Trigger: GCTGGGGAGAAGGCCATTGCAGAGGAGCGTGCCCAA...GGACTGAAGACACAGTAGAAAGATGAAAGCAATCTTCCTACCACTTGTGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR CCA 90 bp | TGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACACACCTTCACCCCTTTCCTaGGAACCTGCCAGTAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: CFHLSTVSSVHRNGPVHTPSPLS*EPASSH Trigger: GTGACTACTGGCAGGTTCCCAGGAAAGGGGTGAAGG...TGTGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR TCA 90 bp | CTGACCTGCCTTGACTCTGCCTGGCAGGCAGAAGCAAACAAAATGGCTCCCAATTCAAGGAAAGCCTTTTaGTCCTTCAGTTGCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTCLDSAWQAEANKMAPNSRKAF*SFSCFS Trigger: GGAGAAGCAACTGAAGGATCAAAAGGCTTTCCTTGA...ATTGGGAGCCATTTTGTTTGCTTCTGCCTGCCAGGCAGAGTCAAGGCAGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| 3UTR CAA 72 bp | GGAGGAAGAGAAGAAGACATGAAGTTTGTAGGGGTATaGCAGGATGTCTTAGAGGAGCTGCGGCGGGTACAT | + |
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Preference number: 4 (lower is better) Translates to: GGREEDMKFVGV*QDVLEELRRVH Trigger: ATGTACCCGCCGCAGCTCCTCTAAGACATCCTGCAATACCCCTACAAACTTCATGTCTTCTTCTCTTCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
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| CDS-3UTR TCA 90 bp | TCGAGGCTGGCTTGTTGTATTGCATCCACAGTCAGGAAGCCACAAGTGGTAGGATTGTTCCTTTTCTCTTaGGCCTCCATATACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLACCIASTVRKPQVVGLFLFS*ASIYSC Trigger: GCAGGAGTATATGGAGGCTCAAGAGAAAAGGAACAA...TCCTACCACTTGTGGCTTCCTGACTGTGGATGCAATACAACAAGCCAGCCTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACACAAGGGCTCTATCTGCCTaGAGGATGGAACTCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CFHLSTVSSVHRNGPVHTRALSA*RMELSM Trigger: CATTGAGAGTTCCATCCTGCAGGCAGATAGAGCCCT...TGTGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGATTTGTTGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGCCTTCTCCCCAGCAGTaGGGGCTCTATCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKDLLWSMNHDNTFCQGWPSPQQ*GLYLPA Trigger: TGCAGGCAGATAGAGCCCTCACTGCTGGGGAGAAGG...CCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAAATCCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGATTTGTTGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGTTGGGCACGCTCCTCTaGAATGGCCTTCTCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKDLLWSMNHDNTFCQGWLGTLL*NGLLPS Trigger: GCTGGGGAGAAGGCCATTGCAGAGGAGCGTGCCCAA...CCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAAATCCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR GCA 90 bp | TCGAGGCTGGCTTGTTGTATTGCATCCACAGTCAGGAAGCCACAAGTGGTAGGAAGCTTTCTCCTCAGTTaGTCTAGGTTTTCCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRLACCIASTVRKPQVVGSFLLS*SRFSLF Trigger: GAACAAGGAAAACCTAGAGCAACTGAGGAGAAAGCT...TCCTACCACTTGTGGCTTCCTGACTGTGGATGCAATACAACAAGCCAGCCTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR TCA 90 bp | TTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACACATAGGATTTCGGGAAGACTTTaGTCTGATCAGCTCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIFLLCLQSTGMVPSTHRISGRL*SDQLSE Trigger: CTCACTGAGCTGATCAGATCAAAGTCTTCCCGAAAT...CCTATGTGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR TCA 90 bp | TGTTGTATTGCATCCACAGTCAGGAAGCCACAAGTGGTAGGAAGATTGCTTTCAGATGCATTCCCTGGCTaGATTGGATGCTTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CCIASTVRKPQVVGRLLSDAFPG*IGCLHS Trigger: AGAGTGCAAGCATCCAATTCAGCCAGGGAATGCATC...TGAAAGCAATCTTCCTACCACTTGTGGCTTCCTGACTGTGGATGCAATACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR TCA 90 bp | CACAGGATATCAGTACCCATCCAGAGGCTTCCCTGTTCCTTCCACCGAGATTCAATCCAGTTGGTCTTCTaGGATAGTCTCAAGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRISVPIQRLPCSFHRDSIQLVF*DSLKFL Trigger: CAAAAACTTGAGACTATCTCAGAAGACCAACTGGAT...TGAATCTCGGTGGAAGGAACAGGGAAGCCTCTGGATGGGTACTGATATCCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
||
| CDS-3UTR TCA 90 bp | CAGAAACAATGGCTGATGTACACACAGGATATCAGTACCCATCCAGAGGCTTCCTTGTTCCTTTTCTCTTaGGCCTCCATATACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKQWLMYTQDISTHPEASLFLFS*ASIYSC Trigger: GCAGGAGTATATGGAGGCTCAAGAGAAAAGGAACAA...GGAAGCCTCTGGATGGGTACTGATATCCTGTGTGTACATCAGCCATTGTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGCAGGACACAGCCACCCTCAAATCAGCACTTTTATATTTAACCTTCGCAGGGCTCTATCTGCCTaGAGGATGGAACTCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: MCAGHSHPQISTFIFNLRRALSA*RMELSM Trigger: CATTGAGAGTTCCATCCTGCAGGCAGATAGAGCCCT...GCGAAGGTTAAATATAAAAGTGCTGATTTGAGGGTGGCTGTGTCCTGCACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGCAGGACACAGCCACCCTCAAATCAGCACTTTTATATTTAACCTTCGCTCCTGCTGCTCCTTCTaGTTCTGTCTTAGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MCAGHSHPQISTFIFNLRSCCSF*FCLSSS Trigger: GGAGCTACTAAGACAGAAGCAGAAGGAGCAGCAGGA...GCGAAGGTTAAATATAAAAGTGCTGATTTGAGGGTGGCTGTGTCCTGCACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR GCA 90 bp | TGTTGTATTGCATCCACAGTCAGGAAGCCACAAGTGGTAGGAAGATTGCTTTCATCCTGCTGCTCCTTCTaGTTCTGTCTTAGTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CCIASTVRKPQVVGRLLSSCCSF*FCLSSS Trigger: GGAGCTACTAAGACAGAAGCAGAAGGAGCAGCAGGA...TGAAAGCAATCTTCCTACCACTTGTGGCTTCCTGACTGTGGATGCAATACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR GCA 90 bp | GAAGCCACAAGTGGTAGGAAGATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCTCCTGCTCTCTCTCCTaGATCAGCTTTCTCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EATSGRKIAFIFLLCLQSSCSLS*ISFLLS Trigger: ACTGAGGAGAAAGCTGATGCAGGAGAGAGAGCAGGA...GGACTGAAGACACAGTAGAAAGATGAAAGCAATCTTCCTACCACTTGTGGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | TGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACACATTTCCACAAGACAAATaGGAGCCATTTGTGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFHLSTVSSVHRNGPVHTFPQDK*EPFVVG Trigger: CCCAACCACAAATGGCTCCCATTTGTCTTGTGGAAA...TGTGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | CACAGGATATCAGTACCCATCCAGAGGCTTCCCTGTTCCTTCCACCGAGATTCAAACTCACAAACTCTGTaGAATTCTTTATTCCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRISVPIQRLPCSFHRDSNSQTL*NSLFRG Trigger: CCCACGGAATAAAGAATTCCACAGAGTTTGTGAGTT...TGAATCTCGGTGGAAGGAACAGGGAAGCCTCTGGATGGGTACTGATATCCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACATGGATGCTTGCACTCTaGGATTGTAACCTGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: IAFIFLLCLQSTGMVPSTWMLAL*DCNLGS Trigger: TGATCCCAGGTTACAATCCCAGAGTGCAAGCATCCA...TGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| 3UTR CAA 72 bp | GCATCCACAGTCAGGAAGCCACAAGTGGTAGGAAGATaGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ASTVRKPQVVGR*LSSFYCVFSPQ Trigger: CTGTGGACTGAAGACACAGTAGAAAGATGAAAGCAATCTTCCTACCACTTGTGGCTTCCTGACTGTGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR TCA 90 bp | AGCTGTTCTGTTCATGTGTGCAGGACACAGCCACCCTCAAATCAGCACTTTTATGGATGGAACTCTCAATaGTGTACTGTGACTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCSVHVCRTQPPSNQHFYGWNSQ*CTVTGE Trigger: TTCTCCAGTCACAGTACATCATTGAGAGTTCCATCC...ATAAAAGTGCTGATTTGAGGGTGGCTGTGTCCTGCACACATGAACAGAACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACATCAAGGAAAGCCTTTTaGTCCTTCAGTTGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IAFIFLLCLQSTGMVPSTSRKAF*SFSCFS Trigger: GGAGAAGCAACTGAAGGATCAAAAGGCTTTCCTTGA...TGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR GCA 90 bp | AGTCAGGAAGCCACAAGTGGTAGGAAGATTGCTTTCATCTTTCTACTGTGTCTTTGTAGACGAAGGTGCTaGTCAGAAGCACACTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQEATSGRKIAFIFLLCLCRRRC*SEAHLG Trigger: CCCTAAGTGTGCTTCTGAGCAGCACCTTCGTCTACA...AAGACACAGTAGAAAGATGAAAGCAATCTTCCTACCACTTGTGGCTTCCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACATTTCCACAAGACAAATaGGAGCCATTTGTGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IAFIFLLCLQSTGMVPSTFPQDK*EPFVVG Trigger: CCCAACCACAAATGGCTCCCATTTGTCTTGTGGAAA...TGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | TGGTCTGATAGATGGTGTCTAATGCCCAGGGACATGAGGCCAGCATTAATTTATTCTGGGATTGTAACCTaGGATCAGCTTCAGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: WSDRWCLMPRDMRPALIYSGIVT*DQLQGI Trigger: AATGCCCTGAAGCTGATCCCAGGTTACAATCCCAGA...ATAAATTAATGCTGGCCTCATGTCCCTGGGCATTAGACACCATCTATCAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
||
| CDS-3UTR CCA 90 bp | TGTTGTATTGCATCCACAGTCAGGAAGCCACAAGTGGTAGGAAGATTGCTTTCATCTGGGATTGTAACCTaGGATCAGCTTCAGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: CCIASTVRKPQVVGRLLSSGIVT*DQLQGI Trigger: AATGCCCTGAAGCTGATCCCAGGTTACAATCCCAGA...TGAAAGCAATCTTCCTACCACTTGTGGCTTCCTGACTGTGGATGCAATACAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | TCGAGGCTGGCTTGTTGTATTGCATCCACAGTCAGGAAGCCACAAGTGGTAGGAAACTTAAGATCCAGTTaGTCTTCTGAGATAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRLACCIASTVRKPQVVGNLRSS*SSEIVS Trigger: TGAGACTATCTCAGAAGACCAACTGGATCTTAAGTT...TCCTACCACTTGTGGCTTCCTGACTGTGGATGCAATACAACAAGCCAGCCTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGATAGATGGTGTCTAATGCCCAGGGACATGAGGCCAGCATTAATTTATTCATATCATGGTCTTTaGTGTCCTGCTCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WSDRWCLMPRDMRPALIYSYHGL*CPALSP Trigger: AGGAGAGAGAGCAGGACATCAAAGACCATGATATGA...ATAAATTAATGCTGGCCTCATGTCCCTGGGCATTAGACACCATCTATCAGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACATTCTCTGTCATGAGTTaGCCGGTCAAAGACAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: IAFIFLLCLQSTGMVPSTFSVMS*PVKDKT Trigger: TGTTTTGTCTTTGACCGGCCAACTCATGACAGAGAA...TGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | AGCTGTTCTGTTCATGTGTGCAGGACACAGCCACCCTCAAATCAGCACTTTTATTCCAGCATCATATCATaGTCTTTGATGTCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCSVHVCRTQPPSNQHFYSSIIS*SLMSCS Trigger: AGAGCAGGACATCAAAGACCATGATATGATGCTGGA...ATAAAAGTGCTGATTTGAGGGTGGCTGTGTCCTGCACACATGAACAGAACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| 3UTR CAA 72 bp | TTGACAACTGAGCCATCTCTGAGCTGTCCACCTCCCTaGTGCCCCATAGATTCTCTTATACTCTATATTATC | + |
|
Preference number: 4 (lower is better) Translates to: LTTEPSLSCPPP*CPIDSLILYII Trigger: GATAATATAGAGTATAAGAGAATCTATGGGGCACAAGGGAGGTGGACAGCTCAGAGATGGCTCAGTTGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGATTTGTTGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGGATGCATTCCCTGGCTaGATTGGATGCTTGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKDLLWSMNHDNTFCQGWDAFPG*IGCLHS Trigger: AGAGTGCAAGCATCCAATTCAGCCAGGGAATGCATC...CCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAAATCCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR GCA 90 bp | ATGAATCATGATAATACATTCTGTCAAGGCTGGATAATGCATTCTGAGAGAAGTTTCTCGCAGGCAGCATaGACATCCAGCAACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MNHDNTFCQGWIMHSERSFSQAA*TSSNSW Trigger: CCAGGAGTTGCTGGATGTGCATGCTGCCTGCGAGAA...ACTTCTCTCAGAATGCATTATCCAGCCTTGACAGAATGTATTATCATGATTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | TGCTTTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACACAAACTTAAGATCCAGTTaGTCTTCTGAGATAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CFHLSTVSSVHRNGPVHTNLRSS*SSEIVS Trigger: TGAGACTATCTCAGAAGACCAACTGGATCTTAAGTT...TGTGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | TTCATCTTTCTACTGTGTCTTCAGTCCACAGGAATGGTCCCGTCCACACATAGGATGATGTACTGTGACTaGAGAAAGTTTTGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FIFLLCLQSTGMVPSTHRMMYCD*RKFWKT Trigger: AGTCTTCCAAAACTTTCTCCAGTCACAGTACATCAT...CCTATGTGTGGACGGGACCATTCCTGTGGACTGAAGACACAGTAGAAAGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | ATCCACAGTCAGGAAGCCACAAGTGGTAGGAAGATTGCTTTCATCTTTCTACTGTCCAGCATCATATCATaGTCTTTGATGTCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IHSQEATSGRKIAFIFLLSSIIS*SLMSCS Trigger: AGAGCAGGACATCAAAGACCATGATATGATGCTGGA...CAGTAGAAAGATGAAAGCAATCTTCCTACCACTTGTGGCTTCCTGACTGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR GCA 90 bp | TTACAAGACATGAAGACAGAGGAAGTAAGCTACTCCAAGATTCCAGTAATCATATCCTGCTCTCTCTCCTaGATCAGCTTTCTCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQDMKTEEVSYSKIPVIISCSLS*ISFLLS Trigger: ACTGAGGAGAAAGCTGATGCAGGAGAGAGAGCAGGA...TATGATTACTGGAATCTTGGAGTAGCTTACTTCCTCTGTCTTCATGTCTTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGATTTGTTGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGTGGATGCTTGCACTCTaGGATTGTAACCTGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RKDLLWSMNHDNTFCQGWWMLAL*DCNLGS Trigger: TGATCCCAGGTTACAATCCCAGAGTGCAAGCATCCA...CCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAAATCCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | GAAGCCACAAGTGGTAGGAAGATTGCTTTCATCTTTCTACTGTGTCTTCAGTCCAACAGCTGTTCATTGTaGTTTTCCACAAGACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: EATSGRKIAFIFLLCLQSNSCSL*FSTRQM Trigger: CATTTGTCTTGTGGAAAACCACAATGAACAGCTGTT...GGACTGAAGACACAGTAGAAAGATGAAAGCAATCTTCCTACCACTTGTGGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR TCA 90 bp | TTGTTGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGATAATGCATATTTCGGGAAGACTTTaGTCTGATCAGCTCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLWSMNHDNTFCQGWIMHISGRL*SDQLSE Trigger: CTCACTGAGCTGATCAGATCAAAGTCTTCCCGAAAT...ATGCATTATCCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR TCA 90 bp | TTGTTGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGATAATGCATTCATATCATGGTCTTTaGTGTCCTGCTCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLWSMNHDNTFCQGWIMHSYHGL*CPALSP Trigger: AGGAGAGAGAGCAGGACATCAAAGACCATGATATGA...ATGCATTATCCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGCAGGACACAGCCACCCTCAAATCAGCACTTTTATATTTAACCTTCGCCAGTCTCTCTATCTCTaGATTTATTTCTTCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MCAGHSHPQISTFIFNLRQSLYL*IYFFSF Trigger: AAAGCTGAAGAAATAAATGCAGAGATAGAGAGACTG...GCGAAGGTTAAATATAAAAGTGCTGATTTGAGGGTGGCTGTGTCCTGCACACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | CTGTTCATGTGTGCAGGACACAGCCACCCTCAAATCAGCACTTTTATATTTAACATGATGTACTGTGACTaGAGAAAGTTTTGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LFMCAGHSHPQISTFIFNMMYCD*RKFWKT Trigger: AGTCTTCCAAAACTTTCTCCAGTCACAGTACATCAT...GTTAAATATAAAAGTGCTGATTTGAGGGTGGCTGTGTCCTGCACACATGAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR TCA 90 bp | ATGAATCATGATAATACATTCTGTCAAGGCTGGATAATGCATTCTGAGAGAAGTGGATGGAACTCTCAATaGTGTACTGTGACTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MNHDNTFCQGWIMHSERSGWNSQ*CTVTGE Trigger: TTCTCCAGTCACAGTACATCATTGAGAGTTCCATCC...ACTTCTCTCAGAATGCATTATCCAGCCTTGACAGAATGTATTATCATGATTCAT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | TTACAAGACATGAAGACAGAGGAAGTAAGCTACTCCAAGATTCCAGTAATCATATTCTCTGTCATGAGTTaGCCGGTCAAAGACAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQDMKTEEVSYSKIPVIIFSVMS*PVKDKT Trigger: TGTTTTGTCTTTGACCGGCCAACTCATGACAGAGAA...TATGATTACTGGAATCTTGGAGTAGCTTACTTCCTCTGTCTTCATGTCTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031238.13 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGATTTGTTGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGCAGTCTCTCTATCTCTaGATTTATTTCTTCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKDLLWSMNHDNTFCQGWQSLYL*IYFFSF Trigger: AAAGCTGAAGAAATAAATGCAGAGATAGAGAGACTG...CCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAAATCCTTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
||
| CDS-3UTR CCA 90 bp | TTGTTGTGGTCCATGAATCATGATAATACATTCTGTCAAGGCTGGATAATGCATAACAGCTGTTCATTGTaGTTTTCCACAAGACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LLWSMNHDNTFCQGWIMHNSCSL*FSTRQM Trigger: CATTTGTCTTGTGGAAAACCACAATGAACAGCTGTT...ATGCATTATCCAGCCTTGACAGAATGTATTATCATGATTCATGGACCACAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR CCA 90 bp | ATGAATCATGATAATACATTCTGTCAAGGCTGGATAATGCATTCTGAGAGAAGTAACTCACAAACTCTGTaGAATTCTTTATTCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: MNHDNTFCQGWIMHSERSNSQTL*NSLFRG Trigger: CCCACGGAATAAAGAATTCCACAGAGTTTGTGAGTT...ACTTCTCTCAGAATGCATTATCCAGCCTTGACAGAATGTATTATCATGATTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS CCA 90 bp | ACTGGAGAAAGTTTTGGAAGACTTCACATGCCTTCACCCCTTTCCTaGGAACCTGCCAGTAGTCACGTTCAATCTTCTTCCTCATGTCCG | + |
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Preference number: 5 (lower is better) Translates to: TGESFGRLHMPSPLS*EPASSHVQSSSSCP Trigger: CGGACATGAGGAAGAAGATTGAACGTGACTACTGGCAGGTTCCCAGGAAAGGGGTGAAGGCATGTGAAGTCTTCCAAAACTTTCTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS TCA 90 bp | AAAACACTTCCGGTTAGGAAAGAAACATCTGATGCATTCCCTGGCTaGATTGGATGCTTGCACTCTGGGATTGTAACCTGGGATCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: KTLPVRKETSDAFPG*IGCLHSGIVTWDQL Trigger: AAGCTGATCCCAGGTTACAATCCCAGAGTGCAAGCATCCAATTCAGCCAGGGAATGCATCAGATGTTTCTTTCCTAACCGGAAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR CAA 90 bp | CTGTTCATGTGTGCAGGACACAGCCACCCTCAAATCAGCACTTTTATATTTAACCTCAAGGAAAGCCTTTaGATCCTTCAGTTGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LFMCAGHSHPQISTFIFNLKESL*ILQLLL Trigger: GAGAAGCAACTGAAGGATCAAAAGGCTTTCCTTGAG...GTTAAATATAAAAGTGCTGATTTGAGGGTGGCTGTGTCCTGCACACATGAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR CAA 90 bp | AGTCAGGAAGCCACAAGTGGTAGGAAGATTGCTTTCATCTTTCTACTGTGTCTTCTTTTGATCCTTCAGTaGCTTCTCCAGCATCATATC | + |
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Preference number: 5 (lower is better) Translates to: SQEATSGRKIAFIFLLCLLLILQ*LLQHHI Trigger: GATATGATGCTGGAGAAGCAACTGAAGGATCAAAAG...AAGACACAGTAGAAAGATGAAAGCAATCTTCCTACCACTTGTGGCTTCCTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR CAA 90 bp | CTGTTCATGTGTGCAGGACACAGCCACCCTCAAATCAGCACTTTTATATTTAACCTTAAAAGTGAAGGATaGTGTGTTAACAATGCAACC | + |
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Preference number: 5 (lower is better) Translates to: LFMCAGHSHPQISTFIFNLKSEG*CVNNAT Trigger: GGTTGCATTGTTAACACACAATCCTTCACTTTTAAG...GTTAAATATAAAAGTGCTGATTTGAGGGTGGCTGTGTCCTGCACACATGAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS-3UTR CAA 90 bp | ATGAATCATGATAATACATTCTGTCAAGGCTGGATAATGCATTCTGAGAGAAGTCTCAAGGAAAGCCTTTaGATCCTTCAGTTGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: MNHDNTFCQGWIMHSERSLKESL*ILQLLL Trigger: GAGAAGCAACTGAAGGATCAAAAGGCTTTCCTTGAG...ACTTCTCTCAGAATGCATTATCCAGCCTTGACAGAATGTATTATCATGATTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS GCA 90 bp | GTTTTCTTTCTTATCCTTGATGTTATGTTCCAGTCTCTCTATCTCTaGATTTATTTCTTCAGCTTTGTTCGTAAATCCTTCCTCAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: VFFLILDVMFQSLYL*IYFFSFVRKSFLKE Trigger: TTCCTTGAGGAAGGATTTACGAACAAAGCTGAAGAAATAAATGCAGAGATAGAGAGACTGGAACATAACATCAAGGATAAGAAAGAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS TCA 72 bp | CTCACTGTAGTGGTCGGCTGCCTTCTGCACAGCTACTaGGTTCTCACGCCGGGCCACACTTGTCATAGCATC | + |
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Preference number: 6 (lower is better) Translates to: LTVVVGCLLHSY*VLTPGHTCHSI Trigger: GATGCTATGACAAGTGTGGCCCGGCGTGAGAACTCAGTAGCTGTGCAGAAGGCAGCCGACCACTACAGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS TCA 72 bp | CGGTACAATCCAACAATAGCCACGACTACCACTGGCTaGGAAATCTTCTCCAGAATCTCTATGGCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RYNPTIATTTTG*EIFSRISMASW Trigger: CCAGGAAGCCATAGAGATTCTGGAGAAGATTTCTCAGCCAGTGGTAGTCGTGGCTATTGTTGGATTGTACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS TCA 72 bp | CCGGTTAGGAAAGAAACATCTGATGCATTCCCTGGCTaGATTGGATGCTTGCACTCTGGGATTGTAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: PVRKETSDAFPG*IGCLHSGIVTW Trigger: CCAGGTTACAATCCCAGAGTGCAAGCATCCAATTCAGCCAGGGAATGCATCAGATGTTTCTTTCCTAACCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS GCA 72 bp | TGCTTCTCCAGCATCATATCATGGTCTTTGATGTCCTaGTCTCTCTCCTGCATCAGCTTTCTCCTCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: CFSSIISWSLMS*SLSCISFLLSC Trigger: GCAACTGAGGAGAAAGCTGATGCAGGAGAGAGAGCAGGACATCAAAGACCATGATATGATGCTGGAGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS CCA 72 bp | AGTTTTGGAAGACTTCACATGCCTTCACCCCTTTCCTaGGAACCTGCCAGTAGTCACGTTCAATCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SFGRLHMPSPLS*EPASSHVQSSS Trigger: GGAAGAAGATTGAACGTGACTACTGGCAGGTTCCCAGGAAAGGGGTGAAGGCATGTGAAGTCTTCCAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS CCA 72 bp | GCCTGCAGGATGGAACTCTCAATGATGTACTGTGACTaGAGAAAGTTTTGGAAGACTTCACATGCCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: ACRMELSMMYCD*RKFWKTSHAFT Trigger: GGTGAAGGCATGTGAAGTCTTCCAAAACTTTCTCCAGTCACAGTACATCATTGAGAGTTCCATCCTGCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS CAA 72 bp | TCCTTCAGTTGCTTCTCCAGCATCATATCATGGTCTTaGATGTCCTGCTCTCTCTCCTGCATCAGCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SFSCFSSIISWS*MSCSLSCISFL Trigger: GAGAAAGCTGATGCAGGAGAGAGAGCAGGACATCAAAGACCATGATATGATGCTGGAGAAGCAACTGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS GCA 72 bp | ATCATATCATGGTCTTTGATGTCCTGCTCTCTCTCCTaGATCAGCTTTCTCCTCAGTTGCTCTAGGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: IISWSLMSCSLS*ISFLLSCSRFS Trigger: GGAAAACCTAGAGCAACTGAGGAGAAAGCTGATGCAGGAGAGAGAGCAGGACATCAAAGACCATGATATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS CCA 72 bp | GAACTCTCAATGATGTACTGTGACTGGAGAAAGTTTTaGAAGACTTCACATGCCTTCACCCCTTTCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ELSMMYCDWRKF*KTSHAFTPFLG Trigger: TCCCAGGAAAGGGGTGAAGGCATGTGAAGTCTTCCAAAACTTTCTCCAGTCACAGTACATCATTGAGAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS TCA 72 bp | ATCTGCCTGCAGGATGGAACTCTCAATGATGTACTGTaGCTGGAGAAAGTTTTGGAAGACTTCACATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: ICLQDGTLNDVL*LEKVLEDFTCL Trigger: AAGGCATGTGAAGTCTTCCAAAACTTTCTCCAGTCACAGTACATCATTGAGAGTTCCATCCTGCAGGCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS TCA 72 bp | GGAATTCTTTATTCCGTGGGGATTTCGGGAAGACTTTaGTCTGATCAGCTCAGTGAGTTCTGTGACATAATG | + |
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Preference number: 6 (lower is better) Translates to: GILYSVGISGRL*SDQLSEFCDIM Trigger: CATTATGTCACAGAACTCACTGAGCTGATCAGATCAAAGTCTTCCCGAAATCCCCACGGAATAAAGAATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS CAA 90 bp | TTTGTTCGTAAATCCTTCCTCAAGGAAAGCCTTTTGATCCTTCAGTaGCTTCTCCAGCATCATATCATGGTCTTTGATGTCCTGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FVRKSFLKESLLILQ*LLQHHIMVFDVLLS Trigger: AGAGAGCAGGACATCAAAGACCATGATATGATGCTGGAGAAGCAACTGAAGGATCAAAAGGCTTTCCTTGAGGAAGGATTTACGAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS CCA 72 bp | AAGAAACTCACAAACTCTGTGGAATTCTTTATTCCGTaGGGATTTCGGGAAGACTTTGATCTGATCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: KKLTNSVEFFIP*GFREDFDLISS Trigger: TGAGCTGATCAGATCAAAGTCTTCCCGAAATCCCCACGGAATAAAGAATTCCACAGAGTTTGTGAGTTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS CAA 72 bp | ATCCTGTGTCCCCCAGGAACAGAGAATGTTGAGATATaGTCCATAAAATCCTTTGAAAGTCGATCCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: ILCPPGTENVEI*SIKSFESRSSS Trigger: AGAACTGGATCGACTTTCAAAGGATTTTATGGACAATATCTCAACATTCTCTGTTCCTGGGGGACACAGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS CAA 72 bp | AAATCCTTCCTCAAGGAAAGCCTTTTGATCCTTCAGTaGCTTCTCCAGCATCATATCATGGTCTTTGATGTC | + |
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Preference number: 6 (lower is better) Translates to: KSFLKESLLILQ*LLQHHIMVFDV Trigger: GACATCAAAGACCATGATATGATGCTGGAGAAGCAACTGAAGGATCAAAAGGCTTTCCTTGAGGAAGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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| CDS CCA 72 bp | AAAGCCTTTGTTCCTTCCCGGAACTTAAGATCCAGTTaGTCTTCTGAGATAGTCTCAAGTTTTTGTAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: KAFVPSRNLRSS*SSEIVSSFCKS Trigger: ACTCTTACAAAAACTTGAGACTATCTCAGAAGACCAACTGGATCTTAAGTTCCGGGAAGGAACAAAGGCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031238.13 ENSMUST00000100961.5 |
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