Pregenerated sensors for GBP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040253Ensembl transcript IDs: ENSMUST00000045097.11, ENSMUST00000171263.8
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGAACCAGGGACCTCCAGAAGAGCAGCCAGTGCTCTTGACCTCTaGGCCATCTCTCCAGCCCCCGCGAGGTGGGTGTTTTTCTTGGTG | + |
|
Preference number: 1 (lower is better) Translates to: TEPGTSRRAASALDL*AISPAPARWVFFLV Trigger: CACCAAGAAAAACACCCACCTCGCGGGGGCTGGAGAGATGGCTCAGAGGTCAAGAGCACTGGCTGCTCTTCTGGAGGTCCCTGGTTCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR GCA 90 bp | GTGTGCCTGATGTGGGATGTTCTGCCGCCTGCAACCAACAGCTCCTaGCCATCCTTGCCCAGTGTCTCCCAGTCCATGAAGGAAAATAAC | + |
|
Preference number: 1 (lower is better) Translates to: VCLMWDVLPPATNSS*PSLPSVSQSMKENN Trigger: GTTATTTTCCTTCATGGACTGGGAGACACTGGGCAAGGATGGGCAGGAGCTGTTGGTTGCAGGCGGCAGAACATCCCACATCAGGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR TCA 90 bp | CAACCAACAGCTCCTGCCCATCCTTGCCCAGTGTCTCCCAGTCCATaGAGGAAAATAACTGTGGCGTCAGGCAGCCCATTCCATGAGATG | + |
|
Preference number: 1 (lower is better) Translates to: QPTAPAHPCPVSPSP*RKITVASGSPFHEM Trigger: CATCTCATGGAATGGGCTGCCTGACGCCACAGTTATTTTCCTTCATGGACTGGGAGACACTGGGCAAGGATGGGCAGGAGCTGTTGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CCA 90 bp | TGTACAGTGTCTGGCTGTGGGCCTCTCTGCATTTGTTCCCATCTGTaGCAGGGGGAAGCTTCTGTGATGATGGCTGAGCAAGGCACTGAT | + |
|
Preference number: 1 (lower is better) Translates to: CTVSGCGPLCICSHL*QGEASVMMAEQGTD Trigger: ATCAGTGCCTTGCTCAGCCATCATCACAGAAGCTTCCCCCTGCCACAGATGGGAACAAATGCAGAGAGGCCCACAGCCAGACACTGTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CCA 90 bp | AGGTTGAGTGTTCCCAAGACTCTCATTCTCTCTCTGTACAGTGTCTaGCTGTGGGCCTCTCTGCATTTGTTCCCATCTGTGGCAGGGGGA | + |
|
Preference number: 1 (lower is better) Translates to: RLSVPKTLILSLYSV*LWASLHLFPSVAGG Trigger: TCCCCCTGCCACAGATGGGAACAAATGCAGAGAGGCCCACAGCCAGACACTGTACAGAGAGAGAATGAGAGTCTTGGGAACACTCAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR GCA 90 bp | CCACAGTTTGTGCCACCACTGCATTTGCATATTTTGCAGGCAGGATaGCATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: PQFVPPLHLHILQAG*HCRSKGLWLGWHLC Trigger: ACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCAAATGCAGTGGTGGCACAAACTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR GCA 90 bp | GTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATATTTTaGAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: VSYSHSLCHHCICIF*RQDAIVDQRACGWA Trigger: AGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CCA 90 bp | TTGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTaGCTGGGCTGGCATTTGTGTTTTTCCTTTGGTAGCATGCAGAGT | + |
|
Preference number: 1 (lower is better) Translates to: LHILQAGCHCRSKGL*LGWHLCFSFGSMQS Trigger: ACTCTGCATGCTACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR GCA 90 bp | GGCCTTAAATCAAATCAGATATTGGTTAGTTACTCCCACAGTTTGTaGCACCACTGCATTTGCATATTTTGCAGGCAGGATGCCATTGTA | + |
|
Preference number: 1 (lower is better) Translates to: GLKSNQILVSYSHSL*HHCICIFCRQDAIV Trigger: TACAATGGCATCCTGCCTGCAAAATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGATTTGATTTAAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CCA 90 bp | CATGGGTTTCATCCCGTGAAGTTGGCCTTAAATCAAATCAGATATTaGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATAT | + |
|
Preference number: 1 (lower is better) Translates to: HGFHPVKLALNQIRY*LVTPTVCATTAFAY Trigger: ATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGATTTGATTTAAGGCCAACTTCACGGGATGAAACCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR TCA 90 bp | AGGAGAAGGATCTATGGGCACCAGCTTGAGTTCTCCATCAATCAATaGGTTGTATACATTTGTTTTCAGCAATGGGGTCTTGCCATTAAT | + |
|
Preference number: 1 (lower is better) Translates to: RRRIYGHQLEFSINQ*VVYICFQQWGLAIN Trigger: ATTAATGGCAAGACCCCATTGCTGAAAACAAATGTATACAACTCATTGATTGATGGAGAACTCAAGCTGGTGCCCATAGATCCTTCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR TCA 90 bp | AGAAACTCTCTTGGAGTAAGATTAATTTCCATTTGTAAGTGGTTATaGATTGAAGATTGCTTCTGTGTCAGAGATGAGGGCTTGTGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: RNSLGVRLISICKWL*IEDCFCVRDEGLCP Trigger: TGGACACAAGCCCTCATCTCTGACACAGAAGCAATCTTCAATTCATAACCACTTACAAATGGAAATTAATCTTACTCCAAGAGAGTTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR-3UTR GCA 90 bp | CCTCTGAGCCATCTCTCCAGCCCCCGCGAGGTGGGTGTTTTTCTTGGTGCCCTCATTTTGCAGGCAGGATaGCATTGTAGATCAAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PLSHLSSPREVGVFLGALILQAG*HCRSKG Trigger: GCCCTTTGATCTACAATGGCATCCTGCCTGCAAAAT...GAGGGCACCAAGAAAAACACCCACCTCGCGGGGGCTGGAGAGATGGCTCAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGACAGGTGTGCCTGATGTGGGATGTTCTGCCGCCTGCAACCAACAGCTCCGGCTTGTGGCTGGGCTaGCATTTGTGTTTTTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: CGQVCLMWDVLPPATNSSGLWLG*HLCFSF Trigger: AAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCC...GGAGCTGTTGGTTGCAGGCGGCAGAACATCCCACATCAGGCACACCTGTCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCGATGCCATCCTTCACCTCTCGATCTATCACAAAGCTCTTACATTCCCTGGTGGATTCTGGAAACTaGACCAGGGACCTCCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: EAMPSFTSRSITKLLHSLVDSGN*TRDLQK Trigger: CTTCTGGAGGTCCCTGGTTCAGTTTCCAGAATCCAC...CAGGGAATGTAAGAGCTTTGTGATAGATCGAGAGGTGAAGGATGGCATCGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCGATGCCATCCTTCACCTCTCGATCTATCACAAAGCTCTTACATTCCCTGGGGTGTTTTTCTTGGTaGCCTCTGTCCTCTCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: EAMPSFTSRSITKLLHSLGCFSW*PLSSLA Trigger: AGCCAGAGAGGACAGAGGGCACCAAGAAAAACACCC...CAGGGAATGTAAGAGCTTTGTGATAGATCGAGAGGTGAAGGATGGCATCGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CAA 90 bp | GTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTTaGGTAGCATGCAGAGTGTCATTCTGTGCCAAAGATGTCCGCATA | + |
|
Preference number: 2 (lower is better) Translates to: VDQRACGWAGICVFP*VACRVSFCAKDVRI Trigger: TATGCGGACATCTTTGGCACAGAATGACACTCTGCATGCTACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGAGTGTTCCCAAGACTCTCATTCTCTCTCTGTACAGTGTCTGGCTGTGGGCCAGAGTGTCATTCTGTaGCAAAGATGTCCGCATATA | + |
|
Preference number: 2 (lower is better) Translates to: VECSQDSHSLSVQCLAVGQSVIL*QRCPHI Trigger: TATATGCGGACATCTTTGGCACAGAATGACACTCTG...GCCCACAGCCAGACACTGTACAGAGAGAGAATGAGAGTCTTGGGAACACTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CAA 90 bp | CATTTGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTaGTGGCTGGGCTGGCATTTGTGTTTTTCCTTTGGTAGCATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HLHILQAGCHCRSKG*WLGWHLCFSFGSMQ Trigger: CTGCATGCTACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTTGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGTTTCCTTTGGTAGCATaGAGAGTGTCATTCTGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: HLHILQAGCHCRSKGLWLFPLVA*RVSFCA Trigger: GGCACAGAATGACACTCTGCATGCTACCAAAGGAAA...CAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATATAGATCAAAGGGCTTGTaGCTGGGCTGGCATTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: IRYWLVTPTVCATTAFAYRSKGL*LGWHLC Trigger: ACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCT...ATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CAA 90 bp | GCATGGGTTTCATCCCGTGAAGTTGGCCTTAAATCAAATCAGATATaGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATA | + |
|
Preference number: 2 (lower is better) Translates to: AWVSSREVGLKSNQI*VSYSHSLCHHCICI Trigger: TATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGATTTGATTTAAGGCCAACTTCACGGGATGAAACCCATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CAA 90 bp | GTTGGCCTTAAATCAAATCAGATATTGGTTAGTTACTCCCACAGTTaGTGCCACCACTGCATTTGCATATTTTGCAGGCAGGATGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: VGLKSNQILVSYSHS*CHHCICIFCRQDAI Trigger: AATGGCATCCTGCCTGCAAAATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGATTTGATTTAAGGCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CAA 90 bp | GAAGGATCTATGGGCACCAGCTTGAGTTCTCCATCAATCAATGAGTaGTATACATTTGTTTTCAGCAATGGGGTCTTGCCATTAATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: EGSMGTSLSSPSINE*YTFVFSNGVLPLIY Trigger: ATAAATTAATGGCAAGACCCCATTGCTGAAAACAAATGTATACAACTCATTGATTGATGGAGAACTCAAGCTGGTGCCCATAGATCCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR GCA 72 bp | TGGACAGGTGTGCCTGATGTGGGATGTTCTGCCGCCTaGAACCAACAGCTCCTGCCCATCCTTGCCCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WTGVPDVGCSAA*NQQLLPILAQC Trigger: ACACTGGGCAAGGATGGGCAGGAGCTGTTGGTTGCAGGCGGCAGAACATCCCACATCAGGCACACCTGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CCA 72 bp | GCATATCGGGTGTCATGTGGACAGGTGTGCCTGATGTaGGATGTTCTGCCGCCTGCAACCAACAGCTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AYRVSCGQVCLM*DVLPPATNSSC Trigger: GCAGGAGCTGTTGGTTGCAGGCGGCAGAACATCCCACATCAGGCACACCTGTCCACATGACACCCGATATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR GCA 72 bp | CTAGAACCCCAACTAGTGCAGACCTGTGCAGGCCTGTaGATCCTTGCCTCTGTCTCTGTGAGTTCCTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: LEPQLVQTCAGL*ILASVSVSSYV Trigger: TACATAGGAACTCACAGAGACAGAGGCAAGGATGCACAGGCCTGCACAGGTCTGCACTAGTTGGGGTTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CCA 72 bp | AAGACTCTCATTCTCTCTCTGTACAGTGTCTGGCTGTaGGCCTCTCTGCATTTGTTCCCATCTGTGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KTLILSLYSVWL*ASLHLFPSVAG Trigger: CCCTGCCACAGATGGGAACAAATGCAGAGAGGCCCACAGCCAGACACTGTACAGAGAGAGAATGAGAGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CCA 72 bp | TTCATGTTGACTGTAATAGGCATATCGGGTGTCATGTaGACAGGTGTGCCTGATGTGGGATGTTCTGCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: FMLTVIGISGVM*TGVPDVGCSAA Trigger: GGCGGCAGAACATCCCACATCAGGCACACCTGTCCACATGACACCCGATATGCCTATTACAGTCAACATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CCA 72 bp | AGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTaGGCTGGCATTTGTGTTTTTCCTTTGGTAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: RQDAIVDQRACG*AGICVFPLVAC Trigger: GCATGCTACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CCA 72 bp | TTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTaGCTGGGCTGGCATTTGTGTTTTTCCTTTGGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LQAGCHCRSKGL*LGWHLCFSFGS Trigger: GCTACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAGTGTTCCCAAGACTCTCATTCTCTCTCTGTACAGTGTCTGGCTGTGGGCCTGCATTTGCATATTTaGCAGGCAGGATGCCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: VECSQDSHSLSVQCLAVGLHLHI*QAGCHC Trigger: ACAATGGCATCCTGCCTGCAAAATATGCAAATGCAG...GCCCACAGCCAGACACTGTACAGAGAGAGAATGAGAGTCTTGGGAACACTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR-3UTR CAA 90 bp | ATTGAAGATTGCTTCTGTGTCAGAGATGAGGGCTTGTGTCCACTTTTCCTTTCATGGGCCTCTCTGCATTaGTTCCCATCTGTGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IEDCFCVRDEGLCPLFLSWASLH*FPSVAG Trigger: CCCTGCCACAGATGGGAACAAATGCAGAGAGGCCCA...TGAAAGGAAAAGTGGACACAAGCCCTCATCTCTGACACAGAAGCAATCTTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR TCA 72 bp | TGTCAGATCACCTGGCACCACAGTTACAGACATTTGTaGACTGCCATGTGGATTCTGGAAACTGAACCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CQITWHHSYRHL*TAMWILETEPG Trigger: CCCTGGTTCAGTTTCCAGAATCCACATGGCAGTTCACAAATGTCTGTAACTGTGGTGCCAGGTGATCTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR TCA 72 bp | CCTGTGCAGGCCTGTGCATCCTTGCCTCTGTCTCTGTaGGTTCCTATGTACATTGATCATATTGGTTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PVQACASLPLSL*VPMYIDHIGSV Trigger: CACTGAACCAATATGATCAATGTACATAGGAACTCACAGAGACAGAGGCAAGGATGCACAGGCCTGCACAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CCA 72 bp | GGATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTaGCATTTGTGTTTTTCCTTTGGTAGCATGCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GCHCRSKGLWLG*HLCFSFGSMQS Trigger: ACTCTGCATGCTACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CCA 72 bp | ACAGTTACAGACATTTGTGAACTGCCATGTGGATTCTaGAAACTGAACCAGGGACCTCCAGAAGAGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TVTDICELPCGF*KLNQGPPEEQP Trigger: TGGCTGCTCTTCTGGAGGTCCCTGGTTCAGTTTCCAGAATCCACATGGCAGTTCACAAATGTCTGTAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCGATGCCATCCTTCACCTCTCGATCTATCACAAAGCTCTTACATTCCCTGTCTATGGGCACCAGCTaGAGTTCTCCATCAATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: EAMPSFTSRSITKLLHSLSMGTS*SSPSIN Trigger: ATTGATTGATGGAGAACTCAAGCTGGTGCCCATAGA...CAGGGAATGTAAGAGCTTTGTGATAGATCGAGAGGTGAAGGATGGCATCGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR-3UTR CAA 90 bp | CAAATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATGGCTGGGCTGGCATTaGTGTTTTTCCTTTGGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: QIRYWLVTPTVCATTAFAWLGWH*CFSFGS Trigger: GCTACCAAAGGAAAAACACAAATGCCAGCCCAGCCA...TGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGAAGATTGCTTCTGTGTCAGAGATGAGGGCTTGTGTCCACTTTTCCTTTCAAGTTACTCCCACAGTTaGTGCCACCACTGCATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: IEDCFCVRDEGLCPLFLSSYSHS*CHHCIC Trigger: GCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACT...TGAAAGGAAAAGTGGACACAAGCCCTCATCTCTGACACAGAAGCAATCTTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCGATGCCATCCTTCACCTCTCGATCTATCACAAAGCTCTTACATTCCCTGGAGTTCCTATGTACATaGATCATATTGGTTCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: EAMPSFTSRSITKLLHSLEFLCT*IILVQW Trigger: CCACTGAACCAATATGATCAATGTACATAGGAACTC...CAGGGAATGTAAGAGCTTTGTGATAGATCGAGAGGTGAAGGATGGCATCGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR GCA 72 bp | GTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTaGATATTTTGCAGGCAGGATGCCATTGTAGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: VSYSHSLCHHCI*IFCRQDAIVDQ Trigger: TTGATCTACAATGGCATCCTGCCTGCAAAATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTATGAGTTGTATACATTaGTTTTCAGCAATGGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: DAIVDQRACGWAGICVFPMSCIH*FSAMGS Trigger: AGACCCCATTGCTGAAAACAAATGTATACAACTCAT...AGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTTGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGATTTGTGTTTTTCCTTaGGTAGCATGCAGAGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HLHILQAGCHCRSKGLWLICVFP*VACRVS Trigger: TGACACTCTGCATGCTACCAAAGGAAAAACACAAAT...CAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR GCA 72 bp | ATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTaGATTTGCATATTTTGCAGGCAGGATGCCATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ILVSYSHSLCHH*ICIFCRQDAIV Trigger: TACAATGGCATCCTGCCTGCAAAATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR TCA 72 bp | TCCGCATATAAGGAGAAGGATCTATGGGCACCAGCTTaGGTTCTCCATCAATCAATGAGTTGTATACATTTG | + |
|
Preference number: 3 (lower is better) Translates to: SAYKEKDLWAPA*VLHQSMSCIHL Trigger: CAAATGTATACAACTCATTGATTGATGGAGAACTCAAGCTGGTGCCCATAGATCCTTCTCCTTATATGCGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR GCA 72 bp | TGTTTTTCCTTTGGTAGCATGCAGAGTGTCATTCTGTaGCAAAGATGTCCGCATATAAGGAGAAGGATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: CFSFGSMQSVIL*QRCPHIRRRIY Trigger: ATAGATCCTTCTCCTTATATGCGGACATCTTTGGCACAGAATGACACTCTGCATGCTACCAAAGGAAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTGCATCCTTGCCTCTGTCTCTGTGAGTTCCTATGTACATTGATCATATTGATGAGTTGTATACATTaGTTTTCAGCAATGGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PVHPCLCLCEFLCTLIILMSCIH*FSAMGS Trigger: AGACCCCATTGCTGAAAACAAATGTATACAACTCAT...CAATATGATCAATGTACATAGGAACTCACAGAGACAGAGGCAAGGATGCACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR TCA 72 bp | ATCTATGGGCACCAGCTTGAGTTCTCCATCAATCAATaGGTTGTATACATTTGTTTTCAGCAATGGGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: IYGHQLEFSINQ*VVYICFQQWGL Trigger: AAGACCCCATTGCTGAAAACAAATGTATACAACTCATTGATTGATGGAGAACTCAAGCTGGTGCCCATAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR TCA 72 bp | CTTGGAGTAAGATTAATTTCCATTTGTAAGTGGTTATaGATTGAAGATTGCTTCTGTGTCAGAGATGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGVRLISICKWL*IEDCFCVRDEG Trigger: GCCCTCATCTCTGACACAGAAGCAATCTTCAATTCATAACCACTTACAAATGGAAATTAATCTTACTCCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR GCA 90 bp | TGTGGACAGGTGTGCCTGATGTGGGATGTTCTGCCGCCTGCAACCAACAGCTCCCTGCTCCTTCTCAGCTaGCTCCTTCTGAGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGQVCLMWDVLPPATNSSLLLLS*LLLSSL Trigger: GAGCGAGCTCAGAAGGAGGCAGCTGAGAAGGAGCAG...GGAGCTGTTGGTTGCAGGCGGCAGAACATCCCACATCAGGCACACCTGTCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CAA 72 bp | GCCATCTCTCCAGCCCCCGCGAGGTGGGTGTTTTTCTaGGTGCCCTCTGTCCTCTCTGGCTGTTATAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AISPAPARWVFF*VPSVLSGCYSF Trigger: AAAACTATAACAGCCAGAGAGGACAGAGGGCACCAAGAAAAACACCCACCTCGCGGGGGCTGGAGAGATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR CCA 90 bp | GCCCTAGAACCCCAACTAGTGCAGACCTGTGCAGGCCTGTGCATCCTTGCCTCTAAAGCACTTCCGTCTTaGAAAGAAGTGCCTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALEPQLVQTCAGLCILASKALPS*KEVPDA Trigger: TGCATCAGGCACTTCTTTCCAAGACGGAAGTGCTTT...AGAGGCAAGGATGCACAGGCCTGCACAGGTCTGCACTAGTTGGGGTTCTAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR TCA 90 bp | GAAGCGATGCCATCCTTCACCTCTCGATCTATCACAAAGCTCTTACATTCCCTGAGCTCAGCCTGGCAGTaGCTGAGAGACGCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EAMPSFTSRSITKLLHSLSSAWQ*LRDAAS Trigger: TGAAGCAGCGTCTCTCAGTCACTGCCAGGCTGAGCT...CAGGGAATGTAAGAGCTTTGTGATAGATCGAGAGGTGAAGGATGGCATCGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR TCA 90 bp | CCACTGCATTTGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGCTCCCTCAGGGACTCTaGGAGCTTGTCCAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLHLHILQAGCHCRSKGLLPQGL*ELVQLS Trigger: GCTGAGCTGGACAAGCTCTCAGAGTCCCTGAGGGAG...CAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCAAATGCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | TGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTATGGAGTTCTCACGCTaGGCCAGGGTTGTTACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CIFCRQDAIVDQRACGWAMEFSR*ARVVTA Trigger: CGCAGTAACAACCCTGGCCCAGCGTGAGAACTCCAT...AGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTAGAACCCCAACTAGTGCAGACCTGTGCAGGCCTGTGCATCCTTGCCTCTCTCAAGAATGTTTATTaGTTTGGAGTTCACCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALEPQLVQTCAGLCILASLKNVY*FGVHPQ Trigger: CTGAGGGTGAACTCCAAAGCAATAAACATTCTTGAG...AGAGGCAAGGATGCACAGGCCTGCACAGGTCTGCACTAGTTGGGGTTCTAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR GCA 90 bp | GAGTGTCATTCTGTGCCAAAGATGTCCGCATATAAGGAGAAGGATCTATGGGCACTGCTCCTTCTCAGCTaGCTCCTTCTGAGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ECHSVPKMSAYKEKDLWALLLLS*LLLSSL Trigger: GAGCGAGCTCAGAAGGAGGCAGCTGAGAAGGAGCAG...TGCCCATAGATCCTTCTCCTTATATGCGGACATCTTTGGCACAGAATGACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCGATGCCATCCTTCACCTCTCGATCTATCACAAAGCTCTTACATTCCCTGCCCAGATTGAAGCCATaGTTCTGTCCTGCCAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EAMPSFTSRSITKLLHSLPRLKP*FCPAKR Trigger: CCGCTTGGCAGGACAGAACCATGGCTTCAATCTGGG...CAGGGAATGTAAGAGCTTTGTGATAGATCGAGAGGTGAAGGATGGCATCGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR TCA 90 bp | TGCCAAAGATGTCCGCATATAAGGAGAAGGATCTATGGGCACCAGCTTGAGTTCAGAGAAAACTCCACGTaGGATGCTCTCCCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CQRCPHIRRRIYGHQLEFRENST*DALPQG Trigger: TCCCTGAGGGAGAGCATCTCACGTGGAGTTTTCTCT...GAACTCAAGCTGGTGCCCATAGATCCTTCTCCTTATATGCGGACATCTTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR TCA 90 bp | ATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTTTGGTATCAGCTGCCTCCTTCTaGGCTCGCTCAGCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IVDQRACGWAGICVFPLVSAASF*ARSASM Trigger: CATGGAAGCTGAGCGAGCTCAGAAGGAGGCAGCTGA...TACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR GCA 90 bp | CATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGTCCAGCTTCACCTCTTaGTCTCTCAGGATGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HILQAGCHCRSKGLWLGWSSFTS*SLRMFF Trigger: GAAGAACATCCTGAGAGAGCAAGAGGTGAAGCTGGA...CCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | CCGCATATAAGGAGAAGGATCTATGGGCACCAGCTTGAGTTCTCCATCAATCAAATGGAGTTCTCACGCTaGGCCAGGGTTGTTACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PHIRRRIYGHQLEFSINQMEFSR*ARVVTA Trigger: CGCAGTAACAACCCTGGCCCAGCGTGAGAACTCCAT...TTGATTGATGGAGAACTCAAGCTGGTGCCCATAGATCCTTCTCCTTATATGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTCATTCTGTGCCAAAGATGTCCGCATATAAGGAGAAGGATCTATGGGCACCTTCTGCACAGCTATaGAGTTCTCACGCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ECHSVPKMSAYKEKDLWAPSAQL*SSHAGP Trigger: TGGCCCAGCGTGAGAACTCCATAGCTGTGCAGAAGG...TGCCCATAGATCCTTCTCCTTATATGCGGACATCTTTGGCACAGAATGACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR TCA 90 bp | GGCATTTGTGTTTTTCCTTTGGTAGCATGCAGAGTGTCATTCTGTGCCAAAGATAGCTCAGCCTGGCAGTaGCTGAGAGACGCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GICVFPLVACRVSFCAKDSSAWQ*LRDAAS Trigger: TGAAGCAGCGTCTCTCAGTCACTGCCAGGCTGAGCT...ATCTTTGGCACAGAATGACACTCTGCATGCTACCAAAGGAAAAACACAAATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | GTTGAGTGTTCCCAAGACTCTCATTCTCTCTCTGTACAGTGTCTGGCTGTGGGCGGCAAGTTAGCTTTCTaGGCTTTGATACTCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VECSQDSHSLSVQCLAVGGKLAF*ALILMP Trigger: AGGCATGAGTATCAAAGCCCAGAAAGCTAACTTGCC...GCCCACAGCCAGACACTGTACAGAGAGAGAATGAGAGTCTTGGGAACACTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR CCA 90 bp | CCTGTGCATCCTTGCCTCTGTCTCTGTGAGTTCCTATGTACATTGATCATATTGCCTTCTGCACAGCTATaGAGTTCTCACGCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVHPCLCLCEFLCTLIILPSAQL*SSHAGP Trigger: TGGCCCAGCGTGAGAACTCCATAGCTGTGCAGAAGG...CAATATGATCAATGTACATAGGAACTCACAGAGACAGAGGCAAGGATGCACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| 3UTR CAA 72 bp | AGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTTaGGTAGCATGCAGAGTGTCATTCTGTGCCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RACGWAGICVFP*VACRVSFCAKD Trigger: ATCTTTGGCACAGAATGACACTCTGCATGCTACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR TCA 90 bp | CAAATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCACAGCCTGGCAGTGACTaGGAGACGCTGCTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QIRYWLVTPTVCATTAFAQPGSD*ETLLHS Trigger: AGAATGAAGCAGCGTCTCTCAGTCACTGCCAGGCTG...TGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR TCA 90 bp | ATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTTTGGTAAGAGAAAACTCCACGTaGGATGCTCTCCCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVDQRACGWAGICVFPLVRENST*DALPQG Trigger: TCCCTGAGGGAGAGCATCTCACGTGGAGTTTTCTCT...TACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATATTCAGCTGCCTCCTTCTaGGCTCGCTCAGCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IRYWLVTPTVCATTAFAYSAASF*ARSASM Trigger: CATGGAAGCTGAGCGAGCTCAGAAGGAGGCAGCTGA...ATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR GCA 90 bp | CCGCATATAAGGAGAAGGATCTATGGGCACCAGCTTGAGTTCTCCATCAATCAACTGAAGGACATGATTTaGCTTCACTCCCTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHIRRRIYGHQLEFSINQLKDMI*LHSLPG Trigger: CCCAGGAAGGGAGTGAAGGCAAATCATGTCCTTCAG...TTGATTGATGGAGAACTCAAGCTGGTGCCCATAGATCCTTCTCCTTATATGCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR GCA 90 bp | CATTTGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGCTGAAGGACATGATTTaGCTTCACTCCCTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLHILQAGCHCRSKGLWLLKDMI*LHSLPG Trigger: CCCAGGAAGGGAGTGAAGGCAAATCATGTCCTTCAG...CAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | GGCATTTGTGTTTTTCCTTTGGTAGCATGCAGAGTGTCATTCTGTGCCAAAGATCCCAGATTGAAGCCATaGTTCTGTCCTGCCAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GICVFPLVACRVSFCAKDPRLKP*FCPAKR Trigger: CCGCTTGGCAGGACAGAACCATGGCTTCAATCTGGG...ATCTTTGGCACAGAATGACACTCTGCATGCTACCAAAGGAAAAACACAAATGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATATCAGCCTGGCAGTGACTaGGAGACGCTGCTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRYWLVTPTVCATTAFAYQPGSD*ETLLHS Trigger: AGAATGAAGCAGCGTCTCTCAGTCACTGCCAGGCTG...ATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTTTGGTAGCCATGGTTCTGTCCTaGCAAGCGGTTCATCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IVDQRACGWAGICVFPLVAMVLS*QAVHQV Trigger: TACTTGATGAACCGCTTGGCAGGACAGAACCATGGC...TACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTGCATCCTTGCCTCTGTCTCTGTGAGTTCCTATGTACATTGATCATATTGACTGTAGTGGTCAGCTaGCTTCTGCACAGCTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVHPCLCLCEFLCTLIILTVVVS*LLHSYG Trigger: TCCATAGCTGTGCAGAAGGCAGCTGACCACTACAGT...CAATATGATCAATGTACATAGGAACTCACAGAGACAGAGGCAAGGATGCACAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR GCA 90 bp | CCACTGCATTTGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTCCAGCTTCACCTCTTaGTCTCTCAGGATGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLHLHILQAGCHCRSKGLSSFTS*SLRMFF Trigger: GAAGAACATCCTGAGAGAGCAAGAGGTGAAGCTGGA...CAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCAAATGCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | TGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTTCTTGGCCTTCGAATTaGAGAAGATGTAGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CIFCRQDAIVDQRACGWASWPSN*RRCRNR Trigger: TCTGTTCCTACATCTTCTCCAATTCGAAGGCCAAGA...AGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTCATTCTGTGCCAAAGATGTCCGCATATAAGGAGAAGGATCTATGGGCAGTTCAACCTTCTTCCTaGCCTCTAAGTAGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ECHSVPKMSAYKEKDLWAVQPSS*PLSRAC Trigger: ACAGGCTCTACTTAGAGGCCAGGAAGAAGGTTGAAC...TGCCCATAGATCCTTCTCCTTATATGCGGACATCTTTGGCACAGAATGACACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CAA 72 bp | ATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTaGTGGCTGGGCTGGCATTTGTGTTTTTCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILQAGCHCRSKG*WLGWHLCFSFG Trigger: ACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CAA 72 bp | GAGGGGAGGGGTTTGATAAAGACACCCTACTTAAGGTaGAGTGTTCCCAAGACTCTCATTCTCTCTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EGRGLIKTPYLR*SVPKTLILSLY Trigger: GTACAGAGAGAGAATGAGAGTCTTGGGAACACTCAACCTTAAGTAGGGTGTCTTTATCAAACCCCTCCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR GCA 90 bp | CAAATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCAGCCATGGTTCTGTCCTaGCAAGCGGTTCATCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QIRYWLVTPTVCATTAFAAMVLS*QAVHQV Trigger: TACTTGATGAACCGCTTGGCAGGACAGAACCATGGC...TGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CAA 72 bp | CATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTaGTGTTTTTCCTTTGGTAGCATGCAGAGTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: HCRSKGLWLGWH*CFSFGSMQSVI Trigger: AATGACACTCTGCATGCTACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CAA 72 bp | CCCAGGCAGTGTAGGCATGGGTTTCATCCCGTGAAGTaGGCCTTAAATCAAATCAGATATTGGTTAGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: PRQCRHGFHPVK*ALNQIRYWLVT Trigger: AGTAACTAACCAATATCTGATTTGATTTAAGGCCAACTTCACGGGATGAAACCCATGCCTACACTGCCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR GCA 90 bp | GATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTGGCATTTCCTCAACATaGACTAAAAGTTCTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DAIVDQRACGWAGICVFPGISST*TKSSLS Trigger: AGACAAAGAACTTTTAGTGCATGTTGAGGAAATGCC...AGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATATGTTCAACCTTCTTCCTaGCCTCTAAGTAGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IRYWLVTPTVCATTAFAYVQPSS*PLSRAC Trigger: ACAGGCTCTACTTAGAGGCCAGGAAGAAGGTTGAAC...ATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGTCATTCTGTGCCAAAGATGTCCGCATATAAGGAGAAGGATCTATGGGCATCTGAATTCTGTGTCTaGTTCATTTGGCTGCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ECHSVPKMSAYKEKDLWASEFCV*FIWLLN Trigger: ATTAAGCAGCCAAATGAATCAGACACAGAATTCAGA...TGCCCATAGATCCTTCTCCTTATATGCGGACATCTTTGGCACAGAATGACACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATATGGCAAGTTAGCTTTCTaGGCTTTGATACTCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IRYWLVTPTVCATTAFAYGKLAF*ALILMP Trigger: AGGCATGAGTATCAAAGCCCAGAAAGCTAACTTGCC...ATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CCA 90 bp | CAAATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATCTTGGCCTTCGAATTaGAGAAGATGTAGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QIRYWLVTPTVCATTAFASWPSN*RRCRNR Trigger: TCTGTTCCTACATCTTCTCCAATTCGAAGGCCAAGA...TGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CAA 72 bp | AGACAACAGCTGTGCACCAAAGCTTTGAAGGTTACATaGGCTGGATTAACCAATGCTGTTAGTTTTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQQLCTKALKVT*AGLTNAVSFSA Trigger: TGCTGAAAAACTAACAGCATTGGTTAATCCAGCCAATGTAACCTTCAAAGCTTTGGTGCACAGCTGTTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR TCA 90 bp | ATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTTTGGTAGATTTTTGCACCCAATaGGCTATTCTTCTCCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: IVDQRACGWAGICVFPLVDFCTQ*AILLLI Trigger: AATAAGGAGAAGAATAGCTCATTGGGTGCAAAAATC...TACCAAAGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR GCA 90 bp | CAAATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCACTCAAGAATGTTTATTaGTTTGGAGTTCACCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QIRYWLVTPTVCATTAFALKNVY*FGVHPQ Trigger: CTGAGGGTGAACTCCAAAGCAATAAACATTCTTGAG...TGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTTGAGTTCTCCATCAATCAATGAGTTGTATACATTTGTTTTCAGCAATACTGTAGTGGTCAGCTaGCTTCTGCACAGCTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSLSSPSINELYTFVFSNTVVVS*LLHSYG Trigger: TCCATAGCTGTGCAGAAGGCAGCTGACCACTACAGT...ATTGCTGAAAACAAATGTATACAACTCATTGATTGATGGAGAACTCAAGCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CAA 72 bp | AAATCAAATCAGATATTGGTTAGTTACTCCCACAGTTaGTGCCACCACTGCATTTGCATATTTTGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSNQILVSYSHS*CHHCICIFCRQ Trigger: CTGCCTGCAAAATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGATTTGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATATTCTGAATTCTGTGTCTaGTTCATTTGGCTGCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IRYWLVTPTVCATTAFAYSEFCV*FIWLLN Trigger: ATTAAGCAGCCAAATGAATCAGACACAGAATTCAGA...ATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| 3UTR CAA 72 bp | GGCAACAAAAGCAACAGCTCATCAATAACCACAGTTTaGTATGTATTCAGCTGTTTTATGTATAGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GNKSNSSSITTV*YVFSCFMYSVC Trigger: ACACACACTATACATAAAACAGCTGAATACATACAAAACTGTGGTTATTGATGAGCTGTTGCTTTTGTTGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR CAA 90 bp | CCTCTGAGCCATCTCTCCAGCCCCCGCGAGGTGGGTGTTTTTCTTGGTGCCCTCTTCCAGCTTCACCTCTaGCTCTCTCAGGATGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLSHLSSPREVGVFLGALFQLHL*LSQDVL Trigger: AAGAACATCCTGAGAGAGCAAGAGGTGAAGCTGGAA...GAGGGCACCAAGAAAAACACCCACCTCGCGGGGGCTGGAGAGATGGCTCAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045097.11 |
||
| CDS-3UTR CAA 90 bp | CATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCACGCTGGGCCAGGGTaGTTACTGCGTTCTCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HILQAGCHCRSKGLWLGWHAGPG*LLRSLN Trigger: GTTTAGAGAACGCAGTAACAACCCTGGCCCAGCGTG...CCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | CCACTGCATTTGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGAGGGACTCTGAGAGCTaGTCCAGCTCAGCCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLHLHILQAGCHCRSKGLRDSES*SSSAWQ Trigger: CTGCCAGGCTGAGCTGGACAAGCTCTCAGAGTCCCT...CAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCAAATGCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | TGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTCTTGTAGCTTCTCTCTaGAGCTTCCATCACCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CIFCRQDAIVDQRACGWALVASL*SFHHLL Trigger: CAGCAGGTGATGGAAGCTCAAGAGAGAAGCTACAAG...AGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | CATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGTTCCAGCTTCACCTCTaGCTCTCTCAGGATGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HILQAGCHCRSKGLWLGWFQLHL*LSQDVL Trigger: AAGAACATCCTGAGAGAGCAAGAGGTGAAGCTGGAA...CCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | GATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTTCTGAAGGACATGATTaGCCTTCACTCCCTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DAIVDQRACGWAGICVFPSEGHD*PSLPSW Trigger: CCAGGAAGGGAGTGAAGGCAAATCATGTCCTTCAGA...AGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | GATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTCTTGTAGCTTCTCTCTaGAGCTTCCATCACCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DAIVDQRACGWAGICVFPLVASL*SFHHLL Trigger: CAGCAGGTGATGGAAGCTCAAGAGAGAAGCTACAAG...AGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGTCATTCTGTGCCAAAGATGTCCGCATATAAGGAGAAGGATCTATGGGCATCTGAAGGACATGATTaGCCTTCACTCCCTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ECHSVPKMSAYKEKDLWASEGHD*PSLPSW Trigger: CCAGGAAGGGAGTGAAGGCAAATCATGTCCTTCAGA...TGCCCATAGATCCTTCTCCTTATATGCGGACATCTTTGGCACAGAATGACACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGATATTGGTTAGTTACTCCCACAGTTTGTGCCACCACTGCATTTGCATATCACGCTGGGCCAGGGTaGTTACTGCGTTCTCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IRYWLVTPTVCATTAFAYHAGPG*LLRSLN Trigger: GTTTAGAGAACGCAGTAACAACCCTGGCCCAGCGTG...ATATGCAAATGCAGTGGTGGCACAAACTGTGGGAGTAACTAACCAATATCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | TGCATATTTTGCAGGCAGGATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTACCCATCAAGGATTTTaGCACCCAATGAGCTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: CIFCRQDAIVDQRACGWATHQGF*HPMSYS Trigger: AGAATAGCTCATTGGGTGCAAAAATCCTTGATGGGT...AGCCCAGCCACAAGCCCTTTGATCTACAATGGCATCCTGCCTGCAAAATATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | GATGCCATTGTAGATCAAAGGGCTTGTGGCTGGGCTGGCATTTGTGTTTTTCCTAGAATGTTTATTGCTTaGGAGTTCACCCTCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DAIVDQRACGWAGICVFPRMFIA*EFTLSS Trigger: AGAACTGAGGGTGAACTCCAAAGCAATAAACATTCT...AGGAAAAACACAAATGCCAGCCCAGCCACAAGCCCTTTGATCTACAATGGCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | CCGCATATAAGGAGAAGGATCTATGGGCACCAGCTTGAGTTCTCCATCAATCAAAGAATGTTTATTGCTTaGGAGTTCACCCTCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PHIRRRIYGHQLEFSINQRMFIA*EFTLSS Trigger: AGAACTGAGGGTGAACTCCAAAGCAATAAACATTCT...TTGATTGATGGAGAACTCAAGCTGGTGCCCATAGATCCTTCTCCTTATATGCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS TCA 90 bp | ATTGCTTCACATTTCCTTTTAAATCCCTCATTAAGCATGTCTTTTTaGATCTTCAACTTGTGTTCCAGCTTCACCTCTTGCTCTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IASHFLLNPSLSMSF*IFNLCSSFTSCSLR Trigger: CCTGAGAGAGCAAGAGGTGAAGCTGGAACACAAGTTGAAGATTCAAAAAGACATGCTTAATGAGGGATTTAAAAGGAAATGTGAAGCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTTGAGTTCTCCATCAATCAATGAGTTGTATACATTTGTTTTCAGCAATACCCATCAAGGATTTTaGCACCCAATGAGCTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSLSSPSINELYTFVFSNTHQGF*HPMSYS Trigger: AGAATAGCTCATTGGGTGCAAAAATCCTTGATGGGT...ATTGCTGAAAACAAATGTATACAACTCATTGATTGATGGAGAACTCAAGCTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS TCA 72 bp | AGGGACTCTGAGAGCTTGTCCAGCTCAGCCTGGCAGTaGCTGAGAGACGCTGCTTCATTCTGTCGCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RDSESLSSSAWQ*LRDAASFCRRK Trigger: TTTCCTGCGACAGAATGAAGCAGCGTCTCTCAGTCACTGCCAGGCTGAGCTGGACAAGCTCTCAGAGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS CCA 72 bp | TCAGCTGCCTTCTGCACAGCTATGGAGTTCTCACGCTaGGCCAGGGTTGTTACTGCGTTCTCTAAACACGGC | + |
|
Preference number: 6 (lower is better) Translates to: SAAFCTAMEFSR*ARVVTAFSKHG Trigger: GCCGTGTTTAGAGAACGCAGTAACAACCCTGGCCCAGCGTGAGAACTCCATAGCTGTGCAGAAGGCAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS CAA 90 bp | AAGAAGTGCCTGATGCATTCCCTAGGCAAGTTAGCTTTCTGGGCTTaGATACTCATGCCTGGGATCAGCTTCAGGGCATTTTCTAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KKCLMHSLGKLAFWA*ILMPGISFRAFSRY Trigger: GTACCTAGAAAATGCCCTGAAGCTGATCCCAGGCATGAGTATCAAAGCCCAGAAAGCTAACTTGCCTAGGGAATGCATCAGGCACTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS GCA 72 bp | CACTACAGGCTGAGTGATCCTCTCAAGAATGTTTATTaGTTTGGAGTTCACCCTCAGTTCTTCATTCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: HYRLSDPLKNVY*FGVHPQFFILI Trigger: AATGAGAATGAAGAACTGAGGGTGAACTCCAAAGCAATAAACATTCTTGAGAGGATCACTCAGCCTGTAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS CAA 90 bp | CATTGCTTCACATTTCCTTTTAAATCCCTCATTAAGCATGTCTTTTaGAATCTTCAACTTGTGTTCCAGCTTCACCTCTTGCTCTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HCFTFPFKSLIKHVF*NLQLVFQLHLLLSQ Trigger: CTGAGAGAGCAAGAGGTGAAGCTGGAACACAAGTTGAAGATTCAAAAAGACATGCTTAATGAGGGATTTAAAAGGAAATGTGAAGCAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS TCA 72 bp | CATTTCCTTTTAAATCCCTCATTAAGCATGTCTTTTTaGATCTTCAACTTGTGTTCCAGCTTCACCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: HFLLNPSLSMSF*IFNLCSSFTSC Trigger: GCAAGAGGTGAAGCTGGAACACAAGTTGAAGATTCAAAAAGACATGCTTAATGAGGGATTTAAAAGGAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS CAA 90 bp | CAGGCACTACTGAAATTAATACATCTCCAAACCCATCAAGGATTTTaGCACCCAATGAGCTATTCTTCTCCTTATTTAGTTGAATCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QALLKLIHLQTHQGF*HPMSYSSPYLVESL Trigger: AAGAGATTCAACTAAATAAGGAGAAGAATAGCTCATTGGGTGCAAAAATCCTTGATGGGTTTGGAGATGTATTAATTTCAGTAGTGCCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS CAA 72 bp | ACATTTCCTTTTAAATCCCTCATTAAGCATGTCTTTTaGAATCTTCAACTTGTGTTCCAGCTTCACCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TFPFKSLIKHVF*NLQLVFQLHLL Trigger: CAAGAGGTGAAGCTGGAACACAAGTTGAAGATTCAAAAAGACATGCTTAATGAGGGATTTAAAAGGAAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||
| CDS CAA 72 bp | CTGAAATTAATACATCTCCAAACCCATCAAGGATTTTaGCACCCAATGAGCTATTCTTCTCCTTATTTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LKLIHLQTHQGF*HPMSYSSPYLV Trigger: AACTAAATAAGGAGAAGAATAGCTCATTGGGTGCAAAAATCCTTGATGGGTTTGGAGATGTATTAATTTCAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045097.11 ENSMUST00000171263.8 |
||