Pregenerated sensors for GBP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000104713Ensembl transcript IDs: ENSMUST00000196520.2, ENSMUST00000200045.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCGCTGTATCTGCCTGCAAGATGGAACTCTCGATGAAGGCCTGTaGCTGCAGAAAGCTCTGGAAGACTTCACTTGCCTTCACCCCTTT | + |
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Preference number: 1 (lower is better) Translates to: ERCICLQDGTLDEGL*LQKALEDFTCLHPF Trigger: AAAGGGGTGAAGGCAAGTGAAGTCTTCCAGAGCTTTCTGCAGTCACAGGCCTTCATCGAGAGTTCCATCTTGCAGGCAGATACAGCGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR GCA 90 bp | GCTGTATCTGCCTGCAAGATGGAACTCTCGATGAAGGCCTGTGACTaGAGAAAGCTCTGGAAGACTTCACTTGCCTTCACCCCTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: AVSACKMELSMKACD*RKLWKTSLAFTPFL Trigger: CAGGAAAGGGGTGAAGGCAAGTGAAGTCTTCCAGAGCTTTCTGCAGTCACAGGCCTTCATCGAGAGTTCCATCTTGCAGGCAGATACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR TCA 90 bp | AAAACACTTCCGGTTAGGAAAGAAAAGTCTGATGCATTCCCTGCATaGATTGGATGCTTGCATTCTGGGTTTGTCACCTGGGATCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: KTLPVRKEKSDAFPA*IGCLHSGFVTWDQL Trigger: AAGCTGATCCCAGGTGACAAACCCAGAATGCAAGCATCCAATTCATGCAGGGAATGCATCAGACTTTTCTTTCCTAACCGGAAGTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR CCA 90 bp | TCTATGAGGGTTTGGGTCATGATCAATTGTCCATGGTCTGGTAGATaGTGTCTAATGCCCAGGGACATGAGGGCAGCATTAATTTATTCA | + |
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Preference number: 1 (lower is better) Translates to: SMRVWVMINCPWSGR*CLMPRDMRAALIYS Trigger: TGAATAAATTAATGCTGCCCTCATGTCCCTGGGCATTAGACACCATCTACCAGACCATGGACAATTGATCATGACCCAAACCCTCATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR GCA 90 bp | TTTGTTTTCATCTTTCTCTGTTTCTTCAGTCCACAGGAACAGTGCTaGCCACCCGTAGGATGTGTTTCCTACAATATTAACCTGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: FVFIFLCFFSPQEQC*PPVGCVSYNINLRQ Trigger: CTGTCTCAGGTTAATATTGTAGGAAACACATCCTACGGGTGGGCAGCACTGTTCCTGTGGACTGAAGAAACAGAGAAAGATGAAAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR TCA 90 bp | GGCTACATGGTCCTCATAGGAGTACAGAAAACCTTGTCTCCTTGCTaGTTCTCTATGCAGTCAAATTGGCCAACAGTAATCACATGTAAT | + |
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Preference number: 1 (lower is better) Translates to: GYMVLIGVQKTLSPC*FSMQSNWPTVITCN Trigger: ATTACATGTGATTACTGTTGGCCAATTTGACTGCATAGAGAATCAGCAAGGAGACAAGGTTTTCTGTACTCCTATGAGGACCATGTAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR TCA 90 bp | GTGGCTTATACCATTTCTAGAAGCAGATGTTTCATCATGCAGTGGTaGGTTTTAACTTATTGTCACTATCACTGTCACTTTCCCAGCACT | + |
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Preference number: 1 (lower is better) Translates to: VAYTISRSRCFIMQW*VLTYCHYHCHFPST Trigger: AGTGCTGGGAAAGTGACAGTGATAGTGACAATAAGTTAAAACTCACCACTGCATGATGAAACATCTGCTTCTAGAAATGGTATAAGCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR GCA 90 bp | AAATGGAAAGCCTTAAAGGAAAACATCATTAAGCTGCAAATGTTATaGTTCCTGGTACTCAAGTCTTGTTCTTGGGTGACTTCTAGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: KWKALKENIIKLQML*FLVLKSCSWVTSSG Trigger: GCCACTAGAAGTCACCCAAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTTCCTTTAAGGCTTTCCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR TCA 90 bp | ATTTCTTCAGCTTTCTTCTTAAATCCTTCCTCAAGGAAAGCCTTTTaGTCCTTCATTAGCTTCTTCAGCATCATATCATGGTCTTTGATG | + |
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Preference number: 1 (lower is better) Translates to: ISSAFFLNPSSRKAF*SFISFFSIISWSLM Trigger: CATCAAAGACCATGATATGATGCTGAAGAAGCTAATGAAGGATCAAAAGGCTTTCCTTGAGGAAGGATTTAAGAAGAAAGCTGAAGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR TCA 90 bp | TTCCAGGATTATCACGATTATGATATCAATGACTTTTCCTCTTGCTaGGATGAAATACCCTCACAAAACCAACTTAAGAAAGGGTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: FQDYHDYDINDFSSC*DEIPSQNQLKKGFV Trigger: AACAAACCCTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTCATTGATATCATAATCGTGATAATCCTGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR-3UTR TCA 90 bp | AATTGTCCATGGTCTGGTAGATGGTGTCTAATGCCCAGGGACATGAGGGCAGCACTCGATGAAGGCCTGTaGCTGCAGAAAGCTCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NCPWSGRWCLMPRDMRAALDEGL*LQKALE Trigger: TTCCAGAGCTTTCTGCAGTCACAGGCCTTCATCGAG...TGCTGCCCTCATGTCCCTGGGCATTAGACACCATCTACCAGACCATGGACAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR CAA 90 bp | TGTGTCAAGGCTGGAGAATGCATTCTGAGAGAAGTTGAGCCTGGCTaGTTGTATAGCATCCACAGTCAGGAAGCCACAAGTGGTAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: CVKAGECILREVEPG*LYSIHSQEATSGRA Trigger: GGCCCTACCACTTGTGGCTTCCTGACTGTGGATGCTATACAACAAGCCAGGCTCAACTTCTCTCAGAATGCATTCTCCAGCCTTGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR CAA 90 bp | GTCAAGGCTGGAGAATGCATTCTGAGAGAAGTTGAGCCTGGCTTGTaGTATAGCATCCACAGTCAGGAAGCCACAAGTGGTAGGGCCATT | + |
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Preference number: 2 (lower is better) Translates to: VKAGECILREVEPGL*YSIHSQEATSGRAI Trigger: AATGGCCCTACCACTTGTGGCTTCCTGACTGTGGATGCTATACAACAAGCCAGGCTCAACTTCTCTCAGAATGCATTCTCCAGCCTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR-3UTR CCA 90 bp | AATTGTCCATGGTCTGGTAGATGGTGTCTAATGCCCAGGGACATGAGGGCAGCATCTGGGTTTGTCACCTaGGATCAGCTTCAAGGCATT | + |
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Preference number: 2 (lower is better) Translates to: NCPWSGRWCLMPRDMRAASGFVT*DQLQGI Trigger: AATGCCTTGAAGCTGATCCCAGGTGACAAACCCAGA...TGCTGCCCTCATGTCCCTGGGCATTAGACACCATCTACCAGACCATGGACAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGTCAGGTCCCTTGGAGTTAGATTTACAGGTAGTTGTTACCTGCCCCAGGTCATATCATGGTCTTTaGTGTCCTGCTCTCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RKSGPLELDLQVVVTCPRSYHGL*CPALSP Trigger: AGGAGAGAGAGCAGGACATCAAAGACCATGATATGA...CCTGGGGCAGGTAACAACTACCTGTAAATCTAACTCCAAGGGACCTGACTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGCATCATATCATGGTCTTTGATGTCCTGCTCTCTCTCCTGCTCCAGCTTCATGAATTGGATGCTTaGATTCTGGGTTTGTCACCT | + |
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Preference number: 2 (lower is better) Translates to: LQHHIMVFDVLLSLLLQLHELDA*ILGLSP Trigger: AGGTGACAAACCCAGAATGCAAGCATCCAATTCATG...AAGCTGGAGCAGGAGAGAGAGCAGGACATCAAAGACCATGATATGATGCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTAATGTACACACAGGACATCTTTTCTTATCCAGAGGATTTCCTGTTCCACCTTCACCCCTTTCCTaGGAACCTGCCAGTAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: MANVHTGHLFLSRGFPVPPSPLS*EPASSH Trigger: ATGACTACTGGCAGGTTCCCAGGAAAGGGGTGAAGG...TGGAACAGGAAATCCTCTGGATAAGAAAAGATGTCCTGTGTGTACATTAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR GCA 90 bp | TCAATGACTTTTCCTCTTGCTGAGATGAAATACCCTCACAAAACCAACTTAAGACCACAGGAACAGTGCTaGCCACCCGTAGGATGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SMTFPLAEMKYPHKTNLRPQEQC*PPVGCV Trigger: AACACATCCTACGGGTGGGCAGCACTGTTCCTGTGG...TCTTAAGTTGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTCATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR-3UTR CCA 90 bp | GTCGATCCAGTTCTTCTTGACAGTATTTATTTGATGCCTCTTCATTCTTCGACAACTGAGTTCTCACGCTaGGCCAGAGTTGTCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: VDPVLLDSIYLMPLHSSTTEFSR*ARVVTA Trigger: TGCTGTGACAACTCTGGCCCAGCGTGAGAACTCAGT...TGTCGAAGAATGAAGAGGCATCAAATAAATACTGTCAAGAAGAACTGGATCGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTATGCAGTCAAATTGGCCAACAGTAATCACATGTAATTACTACTTGCATTGTCTTAGCAGCTCTTaGTCCTTCTCTGCCGCCACC | + |
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Preference number: 2 (lower is better) Translates to: FSMQSNWPTVITCNYYLHCLSSS*SFSAAT Trigger: GGTGGCGGCAGAGAAGGAGCAAGAGCTGCTAAGACA...ATGCAAGTAGTAATTACATGTGATTACTGTTGGCCAATTTGACTGCATAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTAATGTACACACAGGACATCTTTTCTTATCCAGAGGATTTCCTGTTCCATTGATATCTGGTGACTaGGAGAGGGAGTGTGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: MANVHTGHLFLSRGFPVPLISGD*ERECVF Trigger: GAAAACACACTCCCTCTCCCAGTCACCAGATATCAA...TGGAACAGGAAATCCTCTGGATAAGAAAAGATGTCCTGTGTGTACATTAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR GCA 90 bp | TCTATGAATCATGATGATACATTGTGTCAAGGCTGGAGAATGCATTCTGAGAGAATTTGGGGAAGACTTTaGTCTGATCAGCTCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SMNHDDTLCQGWRMHSERIWGRL*SDQLCE Trigger: CTCACAGAGCTGATCAGAGCAAAGTCTTCCCCAAAT...TCTCTCAGAATGCATTCTCCAGCCTTGACACAATGTATCATCATGATTCATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR CCA 90 bp | GTAGTCATGTTCAATCTTCTCCCTCTTGTCCATGTAAAGCTTGTGTCCACAAGGAACTCACAAACTCTGTaGAATTCTTTATTCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VVMFNLLPLVHVKLVSTRNSQTL*NSLFQQ Trigger: CTGCTGGAATAAAGAATTCCACAGAGTTTGTGAGTT...CCTTGTGGACACAAGCTTTACATGGACAAGAGGGAGAAGATTGAACATGACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR GCA 90 bp | TGTCACTTTCCCAGCACTCTTCATGAAATGTGTAAGACTGAGAACGTCATGGAAATGACATCTCTCAGTTaGTGTATCTCTTTGTTCATT | + |
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Preference number: 2 (lower is better) Translates to: CHFPSTLHEMCKTENVMEMTSLS*CISLFI Trigger: AATGAACAAAGAGATACAGCAACTGAGAGATGTCAT...TTCCATGACGTTCTCAGTCTTACACATTTCATGAAGAGTGCTGGGAAAGTGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR CCA 90 bp | TCGATCAGTGTTTCTTTTCTTATCCTTGATGACATCTCTCAGTTGCTGTATCTCTTCAGCATCATATCATaGTCTTTGATGTCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SISVSFLILDDISQLLYLFSIIS*SLMSCS Trigger: AGAGCAGGACATCAAAGACCATGATATGATGCTGAA...GAGATACAGCAACTGAGAGATGTCATCAAGGATAAGAAAAGAAACACTGATCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTAATGTACACACAGGACATCTTTTCTTATCCAGAGGATTTCCTGTTCCATTTTCTATGAGGGTTTaGGTCATGATCAATTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: MANVHTGHLFLSRGFPVPFSMRV*VMINCP Trigger: TGGACAATTGATCATGACCCAAACCCTCATAGAAAA...TGGAACAGGAAATCCTCTGGATAAGAAAAGATGTCCTGTGTGTACATTAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR GCA 90 bp | GATGAAATACCCTCACAAAACCAACTTAAGAAAGGGTTTGTTGGGGTCTATGAACATGTAATTACTACTTaGATAGCTTCCATAGGACTC | + |
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Preference number: 2 (lower is better) Translates to: DEIPSQNQLKKGFVGVYEHVITT*IASIGL Trigger: GAGTCCTATGGAAGCTATGCAAGTAGTAATTACATG...TTCATAGACCCCAACAAACCCTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR-3UTR CCA 90 bp | ATATCAATGACTTTTCCTCTTGCTGAGATGAAATACCCTCACAAAACCAACTTATATTCCAGCAGGATTTaGGGAAGACTTTGCTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: ISMTFPLAEMKYPHKTNLYSSRI*GRLCSD Trigger: ATCAGAGCAAAGTCTTCCCCAAATCCTGCTGGAATA...TAAGTTGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTCATTGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR CAA 90 bp | TCTATGCAGTCAAATTGGCCAACAGTAATCACATGTAATTACTACTaGCATAGCTTCCATAGGACTCATTTCAAAAATGTGTCCTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: SMQSNWPTVITCNYY*HSFHRTHFKNVSSK Trigger: TTTAGAGGACACATTTTTGAAATGAGTCCTATGGAAGCTATGCAAGTAGTAATTACATGTGATTACTGTTGGCCAATTTGACTGCATAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTATGCAGTCAAATTGGCCAACAGTAATCACATGTAATTACTACTTGCATCATGTAATTACTACTTaGATAGCTTCCATAGGACTC | + |
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Preference number: 2 (lower is better) Translates to: FSMQSNWPTVITCNYYLHHVITT*IASIGL Trigger: GAGTCCTATGGAAGCTATGCAAGTAGTAATTACATG...ATGCAAGTAGTAATTACATGTGATTACTGTTGGCCAATTTGACTGCATAGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR TCA 72 bp | GGAACTGAGCTACCCTGGATAAGCATTGTGCATTCTTaGCCCAGAGCCATCTCTGAGCTCTCCACCTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GTELPWISIVHS*PRAISELSTSH Trigger: ATGGGAGGTGGAGAGCTCAGAGATGGCTCTGGGTCAAGAATGCACAATGCTTATCCAGGGTAGCTCAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR CCA 72 bp | AGCTCTGGAAGACTTCACTTGCCTTCACCCCTTTCCTaGGAACCTGCCAGTAGTCATGTTCAATCTTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: SSGRLHLPSPLS*EPASSHVQSSP Trigger: GGGAGAAGATTGAACATGACTACTGGCAGGTTCCCAGGAAAGGGGTGAAGGCAAGTGAAGTCTTCCAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR CAA 90 bp | TGTCACTTTCCCAGCACTCTTCATGAAATGTGTAAGACTGAGAACGTCATGGAACACGCTGGGCCAGAGTaGTCACAGCATCATCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: CHFPSTLHEMCKTENVMEHAGPE*SQHHPD Trigger: GTCTGGATGATGCTGTGACAACTCTGGCCCAGCGTG...TTCCATGACGTTCTCAGTCTTACACATTTCATGAAGAGTGCTGGGAAAGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR CCA 72 bp | GTTTGGGTCATGATCAATTGTCCATGGTCTGGTAGATaGTGTCTAATGCCCAGGGACATGAGGGCAGCATTA | + |
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Preference number: 3 (lower is better) Translates to: VWVMINCPWSGR*CLMPRDMRAAL Trigger: TAATGCTGCCCTCATGTCCCTGGGCATTAGACACCATCTACCAGACCATGGACAATTGATCATGACCCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR CAA 90 bp | AATTGTCCATGGTCTGGTAGATGGTGTCTAATGCCCAGGGACATGAGGGCAGCAGATGACATCTCTCAGTaGCTGTATCTCTTTGTTCAT | + |
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Preference number: 3 (lower is better) Translates to: NCPWSGRWCLMPRDMRAADDISQ*LYLFVH Trigger: ATGAACAAAGAGATACAGCAACTGAGAGATGTCATC...TGCTGCCCTCATGTCCCTGGGCATTAGACACCATCTACCAGACCATGGACAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR TCA 72 bp | CCGGTTAGGAAAGAAAAGTCTGATGCATTCCCTGCATaGATTGGATGCTTGCATTCTGGGTTTGTCACCTGG | + |
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Preference number: 3 (lower is better) Translates to: PVRKEKSDAFPA*IGCLHSGFVTW Trigger: CCAGGTGACAAACCCAGAATGCAAGCATCCAATTCATGCAGGGAATGCATCAGACTTTTCTTTCCTAACCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR CCA 72 bp | TGCCTGGCAGGTCAGCTTTCACTGAAGCAAACAAAATaGCTCCCAATAAAACAGCACCAAGATCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: CLAGQLSLKQTK*LPIKQHQDLSL Trigger: GAGAGAGAGATCTTGGTGCTGTTTTATTGGGAGCCATTTTGTTTGCTTCAGTGAAAGCTGACCTGCCAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR TCA 72 bp | TTAGATTTACAGGTAGTTGTTACCTGCCCCAGGAACTaGGCTACCCTGGATAAGCATTGTGCATTCTTGACC | + |
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Preference number: 3 (lower is better) Translates to: LDLQVVVTCPRN*ATLDKHCAFLT Trigger: GGTCAAGAATGCACAATGCTTATCCAGGGTAGCTCAGTTCCTGGGGCAGGTAACAACTACCTGTAAATCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR GCA 72 bp | AAAAGTCTGATGCATTCCCTGCATGAATTGGATGCTTaGATTCTGGGTTTGTCACCTGGGATCAGCTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: KSLMHSLHELDA*ILGLSPGISFK Trigger: CTTGAAGCTGATCCCAGGTGACAAACCCAGAATGCAAGCATCCAATTCATGCAGGGAATGCATCAGACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR GCA 72 bp | TTCATCTTTCTCTGTTTCTTCAGTCCACAGGAACAGTaGTGCCCACCCGTAGGATGTGTTTCCTACAATATT | + |
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Preference number: 3 (lower is better) Translates to: FIFLCFFSPQEQ*CPPVGCVSYNI Trigger: AATATTGTAGGAAACACATCCTACGGGTGGGCAGCACTGTTCCTGTGGACTGAAGAAACAGAGAAAGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR-3UTR CAA 90 bp | TCGATCAGTGTTTCTTTTCTTATCCTTGATGACATCTCTCAGTTGCTGTATCTCGTTGAGCCTGGCTTGTaGTATAGCATCCACAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: SISVSFLILDDISQLLYLVEPGL*YSIHSQ Trigger: CTGACTGTGGATGCTATACAACAAGCCAGGCTCAAC...GAGATACAGCAACTGAGAGATGTCATCAAGGATAAGAAAAGAAACACTGATCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR CAA 90 bp | TGTCACTTTCCCAGCACTCTTCATGAAATGTGTAAGACTGAGAACGTCATGGAACTTGTGACTTTTCTCTaGAGCCTCCATATACTCCTG | + |
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Preference number: 3 (lower is better) Translates to: CHFPSTLHEMCKTENVMELVTFL*SLHILL Trigger: CAGGAGTATATGGAGGCTCAAGAGAAAAGTCACAAG...TTCCATGACGTTCTCAGTCTTACACATTTCATGAAGAGTGCTGGGAAAGTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR TCA 72 bp | GTCCTCATAGGAGTACAGAAAACCTTGTCTCCTTGCTaGTTCTCTATGCAGTCAAATTGGCCAACAGTAATC | + |
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Preference number: 3 (lower is better) Translates to: VLIGVQKTLSPC*FSMQSNWPTVI Trigger: GATTACTGTTGGCCAATTTGACTGCATAGAGAATCAGCAAGGAGACAAGGTTTTCTGTACTCCTATGAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR-3UTR CAA 90 bp | TCAATGACTTTTCCTCTTGCTGAGATGAAATACCCTCACAAAACCAACTTAAGAGTTGAGCCTGGCTTGTaGTATAGCATCCACAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: SMTFPLAEMKYPHKTNLRVEPGL*YSIHSQ Trigger: CTGACTGTGGATGCTATACAACAAGCCAGGCTCAAC...TCTTAAGTTGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTCATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
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| 3UTR-3UTR CAA 90 bp | TCGATCAGTGTTTCTTTTCTTATCCTTGATGACATCTCTCAGTTGCTGTATCTCGAAAACCTTGTCTCCTaGCTGATTCTCTATGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: SISVSFLILDDISQLLYLENLVS*LILYAV Trigger: GACTGCATAGAGAATCAGCAAGGAGACAAGGTTTTC...GAGATACAGCAACTGAGAGATGTCATCAAGGATAAGAAAAGAAACACTGATCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR CAA 90 bp | AATAGAGACGAAGTAGGCTTCTCCAAGATTCCAGAAATCTTAAGAATGTCTACACATTCCCTGCATGAATaGGATGCTTGCATTCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: NRDEVGFSKIPEILRMSTHSLHE*DACILG Trigger: ACCCAGAATGCAAGCATCCAATTCATGCAGGGAATG...TGTAGACATTCTTAAGATTTCTGGAATCTTGGAGAAGCCTACTTCGTCTCTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
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| 3UTR-3UTR CAA 90 bp | CCTCATAGGAGTACAGAAAACCTTGTCTCCTTGCTGATTCTCTATGCAGTCAAAACATGTAATTACTACTaGCATAGCTTCCATAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: PHRSTENLVSLLILYAVKTCNYY*HSFHRT Trigger: AGTCCTATGGAAGCTATGCAAGTAGTAATTACATGT...TTTGACTGCATAGAGAATCAGCAAGGAGACAAGGTTTTCTGTACTCCTATGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTCACTTTCCCAGCACTCTTCATGAAATGTGTAAGACTGAGAACGTCATGGAAAGTTGCTGTATCTCTTaGTTCATTTCTTCAGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CHFPSTLHEMCKTENVMESCCIS*FISSAF Trigger: GAAAGCTGAAGAAATGAACAAAGAGATACAGCAACT...TTCCATGACGTTCTCAGTCTTACACATTTCATGAAGAGTGCTGGGAAAGTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| 3UTR-3UTR CAA 90 bp | TCGATCAGTGTTTCTTTTCTTATCCTTGATGACATCTCTCAGTTGCTGTATCTCAACTTAAGAAAGGGTTaGTTGGGGTCTATGAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: SISVSFLILDDISQLLYLNLRKG*LGSMNH Trigger: ATGATTCATAGACCCCAACAAACCCTTTCTTAAGTT...GAGATACAGCAACTGAGAGATGTCATCAAGGATAAGAAAAGAAACACTGATCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| 3UTR-3UTR CAA 90 bp | AACTTAAGAAAGGGTTTGTTGGGGTCTATGAATCATGATGATACATTGTGTCAAACATGTAATTACTACTaGCATAGCTTCCATAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: NLRKGLLGSMNHDDTLCQTCNYY*HSFHRT Trigger: AGTCCTATGGAAGCTATGCAAGTAGTAATTACATGT...TTGACACAATGTATCATCATGATTCATAGACCCCAACAAACCCTTTCTTAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| 3UTR TCA 72 bp | TCCATAAAATCCTTTGAAAGTCGATCCAGTTCTTCTTaGCAGTATTTATTTGATGCCTCTTCATTCTTCGAC | + |
|
Preference number: 3 (lower is better) Translates to: SIKSFESRSSSS*QYLFDASSFFD Trigger: GTCGAAGAATGAAGAGGCATCAAATAAATACTGTCAAGAAGAACTGGATCGACTTTCAAAGGATTTTATGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| 3UTR TCA 72 bp | ACCATTTCTAGAAGCAGATGTTTCATCATGCAGTGGTaGGTTTTAACTTATTGTCACTATCACTGTCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: TISRSRCFIMQW*VLTYCHYHCHF Trigger: AAAGTGACAGTGATAGTGACAATAAGTTAAAACTCACCACTGCATGATGAAACATCTGCTTCTAGAAATGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| 3UTR CCA 72 bp | AAAGCCTTTGTTACTTCCTGGAACTTAGGATCCAGTTaGTCTTCTGTGATAGAATCAAGTTTTTGTAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KAFVTSWNLGSS*SSVIESSFCKS Trigger: ACTTTTACAAAAACTTGATTCTATCACAGAAGACCAACTGGATCCTAAGTTCCAGGAAGTAACAAAGGCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| CDS-3UTR CCA 90 bp | CAGGAACAGTGCTGCCCACCCGTAGGATGTGTTTCCTACAATATTAACCTGAGAGGGTGTGCTCTGGCTTaGTGGGGTGTGGCATGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QEQCCPPVGCVSYNINLRGCALA*WGVACT Trigger: GGTGCATGCCACACCCCACCAAGCCAGAGCACACCC...TCTCAGGTTAATATTGTAGGAAACACATCCTACGGGTGGGCAGCACTGTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAACAGTGCTGCCCACCCGTAGGATGTGTTTCCTACAATATTAACCTGAGACCTTCACCCCTTTCCTaGGAACCTGCCAGTAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEQCCPPVGCVSYNINLRPSPLS*EPASSH Trigger: ATGACTACTGGCAGGTTCCCAGGAAAGGGGTGAAGG...TCTCAGGTTAATATTGTAGGAAACACATCCTACGGGTGGGCAGCACTGTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| 3UTR CAA 72 bp | GTGACCCTTGGGTTTGAGAAAAGGAAGTCAGGTCCCTaGGAGTTAGATTTACAGGTAGTTGTTACCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTLGFEKRKSGP*ELDLQVVVTCP Trigger: GGGGCAGGTAACAACTACCTGTAAATCTAACTCCAAGGGACCTGACTTCCTTTTCTCAAACCCAAGGGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| CDS-3UTR CCA 90 bp | GATGAAATACCCTCACAAAACCAACTTAAGAAAGGGTTTGTTGGGGTCTATGAAGACCAGGGTGTGCTCTaGCTTGGTGGGGTGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DEIPSQNQLKKGFVGVYEDQGVL*LGGVWH Trigger: ATGCCACACCCCACCAAGCCAGAGCACACCCTGGTC...TTCATAGACCCCAACAAACCCTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS-3UTR GCA 90 bp | AACTTAAGAAAGGGTTTGTTGGGGTCTATGAATCATGATGATACATTGTGTCAACTGGGCACGCTCCTCTaGAATGGCCTTCTCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLRKGLLGSMNHDDTLCQLGTLL*NGLLPS Trigger: GCTGGGGAGAAGGCCATTGCAGAGGAGCGTGCCCAG...TTGACACAATGTATCATCATGATTCATAGACCCCAACAAACCCTTTCTTAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCTATGCAGTCAAATTGGCCAACAGTAATCACATGTAATTACTACTTGCATCTCTTGCTCCTTCTCTaGCGCCACCTTCTGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: FSMQSNWPTVITCNYYLHLLLLL*RHLLGT Trigger: CGTGCCCAGAAGGTGGCGGCAGAGAAGGAGCAAGAG...ATGCAAGTAGTAATTACATGTGATTACTGTTGGCCAATTTGACTGCATAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS-3UTR CCA 90 bp | ATATCAATGACTTTTCCTCTTGCTGAGATGAAATACCCTCACAAAACCAACTTATCTGCCGCCACCTTCTaGGCACGCTCCTCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ISMTFPLAEMKYPHKTNLSAATF*ARSSAM Trigger: CATTGCAGAGGAGCGTGCCCAGAAGGTGGCGGCAGA...TAAGTTGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTCATTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| 3UTR CAA 72 bp | TCCTTCATTAGCTTCTTCAGCATCATATCATGGTCTTaGATGTCCTGCTCTCTCTCCTGCTCCAGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFISFFSIISWS*MSCSLSCSSFL Trigger: AAGGAAGCTGGAGCAGGAGAGAGAGCAGGACATCAAAGACCATGATATGATGCTGAAGAAGCTAATGAAGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| CDS-3UTR CCA 90 bp | GATGAAATACCCTCACAAAACCAACTTAAGAAAGGGTTTGTTGGGGTCTATGAAACTGAGTTCTCACGCTaGGCCAGAGTTGTCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DEIPSQNQLKKGFVGVYETEFSR*ARVVTA Trigger: TGCTGTGACAACTCTGGCCCAGCGTGAGAACTCAGT...TTCATAGACCCCAACAAACCCTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAACAGTGCTGCCCACCCGTAGGATGTGTTTCCTACAATATTAACCTGAGATTCAGCATCATATCATaGTCTTTGATGTCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QEQCCPPVGCVSYNINLRFSIIS*SLMSCS Trigger: AGAGCAGGACATCAAAGACCATGATATGATGCTGAA...TCTCAGGTTAATATTGTAGGAAACACATCCTACGGGTGGGCAGCACTGTTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| 3UTR CAA 72 bp | CATGGTCCTCATAGGAGTACAGAAAACCTTGTCTCCTaGCTGATTCTCTATGCAGTCAAATTGGCCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HGPHRSTENLVS*LILYAVKLANS Trigger: ACTGTTGGCCAATTTGACTGCATAGAGAATCAGCAAGGAGACAAGGTTTTCTGTACTCCTATGAGGACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| 3UTR CAA 72 bp | TTAGGAAAGAAAAGTCTGATGCATTCCCTGCATGAATaGGATGCTTGCATTCTGGGTTTGTCACCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LGKKSLMHSLHE*DACILGLSPGI Trigger: GATCCCAGGTGACAAACCCAGAATGCAAGCATCCAATTCATGCAGGGAATGCATCAGACTTTTCTTTCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| 3UTR CAA 72 bp | AACCACCAAGATGAATTGAACTTTCACCCCCTTGCCTaGAGCCTCAAGTGTATTTCCTCTTGTAGTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NHQDELNFHPLA*SLKCISSCSSM Trigger: CATGGAACTACAAGAGGAAATACACTTGAGGCTCAAGGCAAGGGGGTGAAAGTTCAATTCATCTTGGTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| CDS-3UTR GCA 90 bp | AACTTAAGAAAGGGTTTGTTGGGGTCTATGAATCATGATGATACATTGTGTCAATGTCTTAGCAGCTCTTaGTCCTTCTCTGCCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLRKGLLGSMNHDDTLCQCLSSS*SFSAAT Trigger: GGTGGCGGCAGAGAAGGAGCAAGAGCTGCTAAGACA...TTGACACAATGTATCATCATGATTCATAGACCCCAACAAACCCTTTCTTAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS-3UTR GCA 90 bp | AACTTAAGAAAGGGTTTGTTGGGGTCTATGAATCATGATGATACATTGTGTCAATGGTCTTTGATGTCCTaGTCTCTCTCCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLRKGLLGSMNHDDTLCQWSLMS*SLSCSS Trigger: GCTGGAGCAGGAGAGAGAGCAGGACATCAAAGACCA...TTGACACAATGTATCATCATGATTCATAGACCCCAACAAACCCTTTCTTAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS-3UTR CCA 90 bp | GATGAAATACCCTCACAAAACCAACTTAAGAAAGGGTTTGTTGGGGTCTATGAATTTCCACAAGGCAAATaGGAGCCATTTGTGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DEIPSQNQLKKGFVGVYEFPQGK*EPFVVG Trigger: CCCAACCACAAATGGCTCCCATTTGCCTTGTGGAAA...TTCATAGACCCCAACAAACCCTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| CDS-3UTR CCA 90 bp | TCTATGAATCATGATGATACATTGTGTCAAGGCTGGAGAATGCATTCTGAGAGATTTCCACAAGGCAAATaGGAGCCATTTGTGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SMNHDDTLCQGWRMHSERFPQGK*EPFVVG Trigger: CCCAACCACAAATGGCTCCCATTTGCCTTGTGGAAA...TCTCTCAGAATGCATTCTCCAGCCTTGACACAATGTATCATCATGATTCATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| CDS-3UTR CCA 90 bp | GATGAAATACCCTCACAAAACCAACTTAAGAAAGGGTTTGTTGGGGTCTATGAATCTGGGTTTGTCACCTaGGATCAGCTTCAAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: DEIPSQNQLKKGFVGVYESGFVT*DQLQGI Trigger: AATGCCTTGAAGCTGATCCCAGGTGACAAACCCAGA...TTCATAGACCCCAACAAACCCTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS-3UTR CCA 90 bp | CCTCATAGGAGTACAGAAAACCTTGTCTCCTTGCTGATTCTCTATGCAGTCAAAATTCCCTGCATGAATTaGATGCTTGCATTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHRSTENLVSLLILYAVKIPCMN*MLAFWV Trigger: AACCCAGAATGCAAGCATCCAATTCATGCAGGGAAT...TTTGACTGCATAGAGAATCAGCAAGGAGACAAGGTTTTCTGTACTCCTATGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| 3UTR CAA 72 bp | AAGGGTTTGTTGGGGTCTATGAATCATGATGATACATaGTGTCAAGGCTGGAGAATGCATTCTGAGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLGSMNHDDT*CQGWRMHSERS Trigger: ACTTCTCTCAGAATGCATTCTCCAGCCTTGACACAATGTATCATCATGATTCATAGACCCCAACAAACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| 3UTR CAA 72 bp | TTTGATGCCTCTTCATTCTTCGACAGGAAAAGCTCTTaGTTCTCTCCTATTAATTCCACCAGCTTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FDASSFFDRKSS*FSPINSTSFFR Trigger: CCTGAAGAAGCTGGTGGAATTAATAGGAGAGAACAAAGAGCTTTTCCTGTCGAAGAATGAAGAGGCATCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| CDS-3UTR CCA 90 bp | TCTATGAATCATGATGATACATTGTGTCAAGGCTGGAGAATGCATTCTGAGAGAATCTCTATGGCTTCCTaGTTCACTGACAGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SMNHDDTLCQGWRMHSERISMAS*FTDSCS Trigger: TGAACAGCTGTCAGTGAACCAGGAAGCCATAGAGAT...TCTCTCAGAATGCATTCTCCAGCCTTGACACAATGTATCATCATGATTCATAGA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| CDS-3UTR CCA 90 bp | TCTATGAATCATGATGATACATTGTGTCAAGGCTGGAGAATGCATTCTGAGAGAGCCTTTGTTACTTCCTaGAACTTAGGATCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMNHDDTLCQGWRMHSERAFVTS*NLGSSW Trigger: CCAACTGGATCCTAAGTTCCAGGAAGTAACAAAGGC...TCTCTCAGAATGCATTCTCCAGCCTTGACACAATGTATCATCATGATTCATAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS-3UTR CCA 90 bp | CCTCATAGGAGTACAGAAAACCTTGTCTCCTTGCTGATTCTCTATGCAGTCAAAAACTCACAAACTCTGTaGAATTCTTTATTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHRSTENLVSLLILYAVKNSQTL*NSLFQQ Trigger: CTGCTGGAATAAAGAATTCCACAGAGTTTGTGAGTT...TTTGACTGCATAGAGAATCAGCAAGGAGACAAGGTTTTCTGTACTCCTATGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| 3UTR CAA 72 bp | CAGATGTTTCATCATGCAGTGGTGAGTTTTAACTTATaGTCACTATCACTGTCACTTTCCCAGCACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QMFHHAVVSFNL*SLSLSLSQHSS Trigger: TGAAGAGTGCTGGGAAAGTGACAGTGATAGTGACAATAAGTTAAAACTCACCACTGCATGATGAAACATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| CDS-3UTR CCA 90 bp | AACTTAAGAAAGGGTTTGTTGGGGTCTATGAATCATGATGATACATTGTGTCAAATCTCTATGGCTTCCTaGTTCACTGACAGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLRKGLLGSMNHDDTLCQISMAS*FTDSCS Trigger: TGAACAGCTGTCAGTGAACCAGGAAGCCATAGAGAT...TTGACACAATGTATCATCATGATTCATAGACCCCAACAAACCCTTTCTTAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| CDS-3UTR CCA 90 bp | TCAATGACTTTTCCTCTTGCTGAGATGAAATACCCTCACAAAACCAACTTAAGATATTCCAGCAGGATTTaGGGAAGACTTTGCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SMTFPLAEMKYPHKTNLRYSSRI*GRLCSD Trigger: ATCAGAGCAAAGTCTTCCCCAAATCCTGCTGGAATA...TCTTAAGTTGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTCATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS-3UTR CCA 90 bp | TCTATGAATCATGATGATACATTGTGTCAAGGCTGGAGAATGCATTCTGAGAGAAACTTAGGATCCAGTTaGTCTTCTGTGATAGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SMNHDDTLCQGWRMHSERNLGSS*SSVIES Trigger: TGATTCTATCACAGAAGACCAACTGGATCCTAAGTT...TCTCTCAGAATGCATTCTCCAGCCTTGACACAATGTATCATCATGATTCATAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| 3UTR CAA 72 bp | AAATACCCTCACAAAACCAACTTAAGAAAGGGTTTGTaGGGGTCTATGAATCATGATGATACATTGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KYPHKTNLRKGL*GSMNHDDTLCQ Trigger: TTGACACAATGTATCATCATGATTCATAGACCCCAACAAACCCTTTCTTAAGTTGGTTTTGTGAGGGTATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| 3UTR CAA 72 bp | ATGAAATACCCTCACAAAACCAACTTAAGAAAGGGTTaGTTGGGGTCTATGAATCATGATGATACATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MKYPHKTNLRKG*LGSMNHDDTLC Trigger: ACACAATGTATCATCATGATTCATAGACCCCAACAAACCCTTTCTTAAGTTGGTTTTGTGAGGGTATTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| 3UTR CAA 72 bp | TCTTCCAGAGGGCATTTCATTTGTGTTCTTGTATGTTaGCATGGGATAGTAGCATTTCTAATAATAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSRGHFICVLVC*HGIVAFLIIIT Trigger: TGTGATTATTATTAGAAATGCTACTATCCCATGCAAACATACAAGAACACAAATGAAATGCCCTCTGGAAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200045.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCTATGCAGTCAAATTGGCCAACAGTAATCACATGTAATTACTACTTGCATAGTTGCTGTATCTCTTaGTTCATTTCTTCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSMQSNWPTVITCNYYLHSCCIS*FISSAF Trigger: GAAAGCTGAAGAAATGAACAAAGAGATACAGCAACT...ATGCAAGTAGTAATTACATGTGATTACTGTTGGCCAATTTGACTGCATAGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196520.2 |
||
| CDS CAA 72 bp | ATCTCTATGGCTTCCTGGTTCACTGACAGCTGTTCATaGTGGTTTTCCACAAGGCAAATGGGAGCCATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ISMASWFTDSCS*WFSTRQMGAIC Trigger: ACAAATGGCTCCCATTTGCCTTGTGGAAAACCACAATGAACAGCTGTCAGTGAACCAGGAAGCCATAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||
| CDS TCA 72 bp | AATCTTGTCCAGAATCTCTATGGCTTCCTGGTTCACTaGCAGCTGTTCATTGTGGTTTTCCACAAGGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: NLVQNLYGFLVH*QLFIVVFHKAN Trigger: ATTTGCCTTGTGGAAAACCACAATGAACAGCTGTCAGTGAACCAGGAAGCCATAGAGATTCTGGACAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000196520.2 ENSMUST00000200045.5 |
||