Pregenerated sensors for GBP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079363Ensembl transcript IDs: ENSMUST00000100962.8, ENSMUST00000196204.5, ENSMUST00000197799.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGCCCCAGGAACCGAGCTACCCTGCATGAAAATTGTGCACTCTTaGCCCAGAGCCATCTCTGAGCTGTCCACCTCCCATGTGACTCTT | + |
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Preference number: 1 (lower is better) Translates to: PAPGTELPCMKIVHS*PRAISELSTSHVTL Trigger: AAGAGTCACATGGGAGGTGGACAGCTCAGAGATGGCTCTGGGTCAAGAGTGCACAATTTTCATGCAGGGTAGCTCGGTTCCTGGGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR GCA 90 bp | CCGATTAGGAAAGAAACGTCTGATGCATTCCCTGGCCGAATTGGATaGTTGGATTCTGGGATTGTTACCTGGGATCAGCTTCAGGGCATT | + |
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Preference number: 1 (lower is better) Translates to: PIRKETSDAFPGRIG*LDSGIVTWDQLQGI Trigger: AATGCCCTGAAGCTGATCCCAGGTAACAATCCCAGAATCCAAGCATCCAATTCGGCCAGGGAATGCATCAGACGTTTCTTTCCTAATCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR CCA 90 bp | TTAGGAAAGAAACGTCTGATGCATTCCCTGGCCGAATTGGATGCTTaGATTCTGGGATTGTTACCTGGGATCAGCTTCAGGGCATTCTCC | + |
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Preference number: 1 (lower is better) Translates to: LGKKRLMHSLAELDA*ILGLLPGISFRAFS Trigger: GGAGAATGCCCTGAAGCTGATCCCAGGTAACAATCCCAGAATCCAAGCATCCAATTCGGCCAGGGAATGCATCAGACGTTTCTTTCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR CCA 90 bp | ACTGCAGAAAGTTCTGGAAGACTTCACTTGCCTTCACCCCTTTCCTaGGAACCTGCCAGTAGTCATGTTCAATCTTTTCCCTCATGTCCA | + |
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Preference number: 1 (lower is better) Translates to: TAESSGRLHLPSPLS*EPASSHVQSFPSCP Trigger: TGGACATGAGGGAAAAGATTGAACATGACTACTGGCAGGTTCCCAGGAAAGGGGTGAAGGCAAGTGAAGTCTTCCAGAACTTTCTGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR CCA 90 bp | CGGAAAGTCTTTTGTTCCTTCGTTAGCTTCTCCAGCATCATGTTATaGTCTTTGATGAGCTGCTCTCTCTCCTGCTCCAGCTTCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: RKVFCSFVSFSSIML*SLMSCSLSCSSFLL Trigger: GAGAAGGAAGCTGGAGCAGGAGAGAGAGCAGCTCATCAAAGACCATAACATGATGCTGGAGAAGCTAACGAAGGAACAAAAGACTTTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR TCA 90 bp | TGCACTCTTGACCCAGAGCCATCTCTGAGCTGTCCACCTCCCATGTaGCTCTTGGACTCTCTTATCCTCAATACTATCATTTCTCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: CTLDPEPSLSCPPPM*LLDSLILNTIISLL Trigger: CAAAAGAGAAATGATAGTATTGAGGATAAGAGAGTCCAAGAGTCACATGGGAGGTGGACAGCTCAGAGATGGCTCTGGGTCAAGAGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR GCA 90 bp | TTCTCCAGCATCATGTTATGGTCTTTGATGAGCTGCTCTCTCTCCTaGTCCAGCTTCCTTCTCAGTTGCTCTAGGTTTTCCTTGTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: FSSIMLWSLMSCSLS*SSFLLSCSRFSLFL Trigger: AAGGAACAAGGAAAACCTAGAGCAACTGAGAAGGAAGCTGGAGCAGGAGAGAGAGCAGCTCATCAAAGACCATAACATGATGCTGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR TCA 90 bp | GGTTTGTTGTGGTCCATGAATCATGATGATACATTTCATCAAGGCTaGAAATGCATTCTGAGAGAAGTCCAGGCTGGCTTGTTGTATGGC | + |
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Preference number: 1 (lower is better) Translates to: GLLWSMNHDDTFHQG*KCILREVQAGLLYG Trigger: GCCATACAACAAGCCAGCCTGGACTTCTCTCAGAATGCATTTTCAGCCTTGATGAAATGTATCATCATGATTCATGGACCACAACAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR TCA 90 bp | CCATTCTTCTCACGTAGTAATTCCACCAGCTTCTTCAGGAATTGCTaGTTTTCGTCTTTGAAGGAATGCTCCATAAAGACAGCCATGGCT | + |
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Preference number: 1 (lower is better) Translates to: PFFSRSNSTSFFRNC*FSSLKECSIKTAMA Trigger: AGCCATGGCTGTCTTTATGGAGCATTCCTTCAAAGACGAAAATCAGCAATTCCTGAAGAAGCTGGTGGAATTACTACGTGAGAAGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR GCA 90 bp | GCACTCTTCAAGAAATGTATAAGACTGAGAACGCCATGGAATGTATaGATCTCTTCAACTTTTTACTCCAACCTATTCTCCCTCGATGAA | + |
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Preference number: 1 (lower is better) Translates to: ALFKKCIRLRTPWNV*ISSTFYSNLFSLDE Trigger: TTCATCGAGGGAGAATAGGTTGGAGTAAAAAGTTGAAGAGATGCATACATTCCATGGCGTTCTCAGTCTTATACATTTCTTGAAGAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR TCA 90 bp | TTAAAATACTTTCCACAAGGGAATCACCATTTTGTTTCATTTCCTTaGTGTTATGTCCCAGTTGATGGATCTCTCGACGCAATTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LKYFPQGNHHFVSFP*CYVPVDGSLDAIPQ Trigger: CTGAGGAATTGCGTCGAGAGATCCATCAACTGGGACATAACATCAAGGAAATGAAACAAAATGGTGATTCCCTTGTGGAAAGTATTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR GCA 90 bp | AACATCATTAACTCAAAGGAAAACATCATTAAGCTGCAAATGTTATaGTTCCTGGTACTCAAGTCTTGTTCTTGGGTGACTTCTAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: NIINSKENIIKLQML*FLVLKSCSWVTSSG Trigger: GCCACTAGAAGTCACCCAAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTTCCTTTGAGTTAATGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR TCA 90 bp | CTCAGTACCGTGGAAACAATATCACAAGGTAGCTTAAATAATAGCTaGTATACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: LSTVETISQGSLNNS*YTHRISFLIQRISC Trigger: ACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTATATCAGCTATTATTTAAGCTACCTTGTGATATTGTTTCCACGGTACTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR TCA 90 bp | AAAAGCCATTGCACTTTCCTTAAACGTAGGATCCAATTGGTCTTCTaGAATAGTCTCAAGTTGTTTTATGAGTTCTATGTCATGAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: KSHCTFLKRRIQLVF*NSLKLFYEFYVMSW Trigger: CCAACTCATGACATAGAACTCATAAAACAACTTGAGACTATTTCAGAAGACCAATTGGATCCTACGTTTAAGGAAAGTGCAATGGCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | GAAGTACCAGTGACCAGTAGGGGTCAGAAAACTAAGTCAGATCCCTTGGAGTTAGACCCTGACCTGCCTTaGCTGTGCCTGGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: EVPVTSRGQKTKSDPLELDPDLP*LCLAGR Trigger: CCTGCCTGCCAGGCACAGTCAAGGCAGGTCAGGGTC...TAACTCCAAGGGATCTGACTTAGTTTTCTGACCCCTACTGGTCACTGGTACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGCATCATGTTATGGTCTTTGATGAGCTGCTCTCTCTCCTGCTCCAGCTTCTCGATGATGGCCTGTaGCTGCAGAAAGTTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LQHHVMVFDELLSLLLQLLDDGL*LQKVLE Trigger: TTCCAGAACTTTCTGCAGTCACAGGCCATCATCGAG...AAGCTGGAGCAGGAGAGAGAGCAGCTCATCAAAGACCATAACATGATGCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR CAA 90 bp | CACTTCCGATTAGGAAAGAAACGTCTGATGCATTCCCTGGCCGAATaGGATGCTTGGATTCTGGGATTGTTACCTGGGATCAGCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: HFRLGKKRLMHSLAE*DAWILGLLPGISFR Trigger: CCTGAAGCTGATCCCAGGTAACAATCCCAGAATCCAAGCATCCAATTCGGCCAGGGAATGCATCAGACGTTTCTTTCCTAATCGGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR CAA 90 bp | GTCTTTTGTTCCTTCGTTAGCTTCTCCAGCATCATGTTATGGTCTTaGATGAGCTGCTCTCTCTCCTGCTCCAGCTTCCTTCTCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: VFCSFVSFSSIMLWS*MSCSLSCSSFLLSC Trigger: GCAACTGAGAAGGAAGCTGGAGCAGGAGAGAGAGCAGCTCATCAAAGACCATAACATGATGCTGGAGAAGCTAACGAAGGAACAAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | TCGTCTTTGAAGGAATGCTCCATAAAGACAGCCATGGCTTCCTTCTCGCAGGCTAGTGGTAGGGCCATTTaGTTTCTTCTTTCTACCGTG | + |
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Preference number: 2 (lower is better) Translates to: SSLKECSIKTAMASFSQASGRAI*FLLSTV Trigger: CACGGTAGAAAGAAGAAATCAAATGGCCCTACCACT...AGCCTGCGAGAAGGAAGCCATGGCTGTCTTTATGGAGCATTCCTTCAAAGACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | TATACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAAGTAAGGGGAGGCAGTaGGATCATGAGACCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: YTHRISFLIQRISCSNQQSKGRQ*DHETPP Trigger: GGGTGGGGTCTCATGATCTCACTGCCTCCCCTTACT...TTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR GCA 90 bp | TGTATATGTGTAACCTGGGGATATATGATGGAAGTACCAGTGACCAGTAGGGGTTGGCTGGCTGCCTTCTaGACAGCTACTGAGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CICVTWGYMMEVPVTSRGWLAAF*TATEFS Trigger: TGAGAACTCAGTAGCTGTGCAGAAGGCAGCCAGCCA...ACCCCTACTGGTCACTGGTACTTCCATCATATATCCCCAGGTTACACATATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGATATACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCTGCTCTCTCTCCTaGTCCAGCTTCCTTCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: ADIHTGYPFLSRGFPVPTSCSLS*SSFLLS Trigger: ACTGAGAAGGAAGCTGGAGCAGGAGAGAGAGCAGCT...GGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTATATCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR CCA 90 bp | TATACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAATGCCTTGACTGTGCCTaGCAGGCAGGCTGTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: YTHRISFLIQRISCSNQQCLDCA*QAGCQR Trigger: TCTTTGACAGCCTGCCTGCCAGGCACAGTCAAGGCA...TTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTCCACAGCAATGGTGCTaGCCACACTTAGGATGGGTT | + |
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Preference number: 2 (lower is better) Translates to: QGIKREVGFSKIPETIRVPQQWC*PHLGWV Trigger: AACCCATCCTAAGTGTGGGCAGCACCATTGCTGTGG...AACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAATGCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR GCA 90 bp | AGACTGAGAACGCCATGGAATGTATGCATCTCTTCAACTTTTTACTCCAACCTACCACAGCAATGGTGCTaGCCACACTTAGGATGGGTT | + |
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Preference number: 2 (lower is better) Translates to: RLRTPWNVCISSTFYSNLPQQWC*PHLGWV Trigger: AACCCATCCTAAGTGTGGGCAGCACCATTGCTGTGG...TAGGTTGGAGTAAAAAGTTGAAGAGATGCATACATTCCATGGCGTTCTCAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR GCA 90 bp | GAAGTACCAGTGACCAGTAGGGGTCAGAAAACTAAGTCAGATCCCTTGGAGTTAATGATGGCCTGTGACTaGAGAAAGTTCTGGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: EVPVTSRGQKTKSDPLELMMACD*RKFWKT Trigger: AGTCTTCCAGAACTTTCTGCAGTCACAGGCCATCAT...TAACTCCAAGGGATCTGACTTAGTTTTCTGACCCCTACTGGTCACTGGTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR CCA 90 bp | ACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGATGAGAGAAGTCCAGGCTaGCTTGTTGTATGGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: THRISFLIQRISCSNQQDERSPG*LVVWHP Trigger: TGGATGCCATACAACAAGCCAGCCTGGACTTCTCTC...ATCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGTTGCAGGTGAATACCACATCAACCTCAAGTTTATTTTTCTTAGCTTTTGCCTTGACTGTGCCTaGCAGGCAGGCTGTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: GKVAGEYHINLKFIFLSFCLDCA*QAGCQR Trigger: TCTTTGACAGCCTGCCTGCCAGGCACAGTCAAGGCA...AAAGCTAAGAAAAATAAACTTGAGGTTGATGTGGTATTCACCTGCAACCTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR CCA 90 bp | AAATGGCTCCCAATAAGACAGCACCAAAATCTCTCCTTTACTCAGTTCATTCTTGCTCACTGTAGTGGCTaGCTGCCTTCTGCACAGCTA | + |
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Preference number: 2 (lower is better) Translates to: KWLPIRQHQNLSFTQFILAHCSG*LPSAQL Trigger: TAGCTGTGCAGAAGGCAGCCAGCCACTACAGTGAGC...AAGAATGAACTGAGTAAAGGAGAGATTTTGGTGCTGTCTTATTGGGAGCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTCAGCTGCCTCCTTCTTaGTGTGCTTCTCTGCAATGG | + |
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Preference number: 2 (lower is better) Translates to: QGIKREVGFSKIPETIRVQLPPS*CASLQW Trigger: CCATTGCAGAGAAGCACACCAAGAAGGAGGCAGCTG...AACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAATGCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | TACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGATCCATCCCCTTGCATTaGGCCTCAAGTGTATTTCCT | + |
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Preference number: 2 (lower is better) Translates to: YTQDILSYPEDFLFQPARSIPLH*ASSVFP Trigger: AGGAAATACACTTGAGGCTCAATGCAAGGGGATGGA...TCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGCATCATGTTATGGTCTTTGATGAGCTGCTCTCTCTCCTGCTCCAGCTTTTCTTCAGGAATTGCTaGTTTTCGTCTTTGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LQHHVMVFDELLSLLLQLFFRNC*FSSLKE Trigger: TTCCTTCAAAGACGAAAATCAGCAATTCCTGAAGAA...AAGCTGGAGCAGGAGAGAGAGCAGCTCATCAAAGACCATAACATGATGCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR CCA 90 bp | GTAGTCATGTTCAATCTTTTCCCTCATGTCCATGTAGAGCCTGTGTCCCCCAGGAACTCACAAACTCTGTaGAATTCTTTATTCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: VVMFNLFPHVHVEPVSPRNSQTL*NSLFHG Trigger: CCCATGGAATAAAGAATTCCACAGAGTTTGTGAGTT...CCTGGGGGACACAGGCTCTACATGGACATGAGGGAAAAGATTGAACATGACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR CCA 90 bp | TGTATATGTGTAACCTGGGGATATATGATGGAAGTACCAGTGACCAGTAGGGGTTGGATGCTTGGATTCTaGGATTGTTACCTGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: CICVTWGYMMEVPVTSRGWMLGF*DCYLGS Trigger: TGATCCCAGGTAACAATCCCAGAATCCAAGCATCCA...ACCCCTACTGGTCACTGGTACTTCCATCATATATCCCCAGGTTACACATATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR CCA 90 bp | TGTATATGTGTAACCTGGGGATATATGATGGAAGTACCAGTGACCAGTAGGGGTGACTGCAGAAAGTTCTaGAAGACTTCACTTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: CICVTWGYMMEVPVTSRGDCRKF*KTSLAF Trigger: GAAGGCAAGTGAAGTCTTCCAGAACTTTCTGCAGTC...ACCCCTACTGGTCACTGGTACTTCCATCATATATCCCCAGGTTACACATATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | TATACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAAAAATTGTGCACTCTTaGCCCAGAGCCATCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: YTHRISFLIQRISCSNQQKIVHS*PRAISE Trigger: CTCAGAGATGGCTCTGGGTCAAGAGTGCACAATTTT...TTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTATA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | TACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGAGAGGAGGGAAAGACATaGAATTGGGACGTGAATTTG | + |
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Preference number: 2 (lower is better) Translates to: YTQDILSYPEDFLFQPAREEGKT*NWDVNL Trigger: CAAATTCACGTCCCAATTTCATGTCTTTCCCTCCTC...TCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR GCA 90 bp | AAATGGCTCCCAATAAGACAGCACCAAAATCTCTCCTTTACTCAGTTCATTCTTAGGGCTGTATCTGCCTaGAAGATGGAACTCTCGATG | + |
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Preference number: 2 (lower is better) Translates to: KWLPIRQHQNLSFTQFILRAVSA*KMELSM Trigger: CATCGAGAGTTCCATCTTGCAGGCAGATACAGCCCT...AAGAATGAACTGAGTAAAGGAGAGATTTTGGTGCTGTCTTATTGGGAGCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR CCA 90 bp | TACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGATTGATATCTGGTGACTaGGAGAGGGAGAGTGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: YTQDILSYPEDFLFQPARLISGD*ERESVF Trigger: AAACACACTCTCCCTCTCCCAGTCACCAGATATCAA...TCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGTACCAGTGACCAGTAGGGGTCAGAAAACTAAGTCAGATCCCTTGGAGTTATATTCCATGGGGATTTaGGGAAGATTTTGCTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: EVPVTSRGQKTKSDPLELYSMGI*GRFCSD Trigger: ATCAGAGCAAAATCTTCCCCAAATCCCCATGGAATA...TAACTCCAAGGGATCTGACTTAGTTTTCTGACCCCTACTGGTCACTGGTACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR-3UTR GCA 90 bp | ATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTTCTATATTCCTTCTCGCAGGCTaGATGTACATCCAGCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: IKREVGFSKIPETIRVSIFLLAG*MYIQQL Trigger: GAGCTGCTGGATGTACATGCAGCCTGCGAGAAGGAA...TATAGAAACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
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| 3UTR CAA 90 bp | CCTGGGTTACATGGTCCTCATAGGAGTACAGAAAACCTTGTTTTCTaGCTGAATCTATATGCAGTTAAATTGGCCAGCAGTGATCATATG | + |
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Preference number: 2 (lower is better) Translates to: PGLHGPHRSTENLVF*LNLYAVKLASSDHM Trigger: CATATGATCACTGCTGGCCAATTTAACTGCATATAGATTCAGCAAGAAAACAAGGTTTTCTGTACTCCTATGAGGACCATGTAACCCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | TGTATATGTGTAACCTGGGGATATATGATGGAAGTACCAGTGACCAGTAGGGGTGTTTGTTGTGGTCCATaGATCATGATGATACATTTC | + |
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Preference number: 2 (lower is better) Translates to: CICVTWGYMMEVPVTSRGVCCGP*IMMIHF Trigger: GAAATGTATCATCATGATTCATGGACCACAACAAAC...ACCCCTACTGGTCACTGGTACTTCCATCATATATCCCCAGGTTACACATATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | TGTATATGTGTAACCTGGGGATATATGATGGAAGTACCAGTGACCAGTAGGGGTTTCATCATGCAGTGGTaGGTTTTAACTTATTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: CICVTWGYMMEVPVTSRGFIMQW*VLTYCH Trigger: GTGACAATAAGTTAAAACTCACCACTGCATGATGAA...ACCCCTACTGGTCACTGGTACTTCCATCATATATCCCCAGGTTACACATATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| 3UTR-3UTR TCA 90 bp | ATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTTCTATACCGAGCTACCCTGCATaGAAATTGTGCACTCTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: IKREVGFSKIPETIRVSIPSYPA*KLCTLD Trigger: GTCAAGAGTGCACAATTTTCATGCAGGGTAGCTCGG...TATAGAAACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAGGTTGCAGGTGAATACCACATCAACCTCAAGTTTATTTTTCTTAGCTTTGGAACTATTAGCAGTTaGTATCTGGTGACTGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GKVAGEYHINLKFIFLSFGTISS*YLVTGR Trigger: TCTCCCAGTCACCAGATATCAACTGCTAATAGTTCC...AAAGCTAAGAAAAATAAACTTGAGGTTGATGTGGTATTCACCTGCAACCTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR GCA 90 bp | AGACTGAGAACGCCATGGAATGTATGCATCTCTTCAACTTTTTACTCCAACCTAATTTGGGGAAGATTTTaGTCTGATCAGCTCAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RLRTPWNVCISSTFYSNLIWGRF*SDQLSE Trigger: CTCACTGAGCTGATCAGAGCAAAATCTTCCCCAAAT...TAGGTTGGAGTAAAAAGTTGAAGAGATGCATACATTCCATGGCGTTCTCAGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR GCA 90 bp | ACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGATAGAAGCAAAAGCCATTaGACTTTCCTTAAACGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: THRISFLIQRISCSNQQDRSKSH*TFLKRR Trigger: CCTACGTTTAAGGAAAGTGCAATGGCTTTTGCTTCT...ATCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR CCA 90 bp | ATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTTCTATAGAGAGAAGTCCAGGCTaGCTTGTTGTATGGCATCCA | + |
|
Preference number: 2 (lower is better) Translates to: IKREVGFSKIPETIRVSIERSPG*LVVWHP Trigger: TGGATGCCATACAACAAGCCAGCCTGGACTTCTCTC...TATAGAAACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR CCA 90 bp | GATGAAGCCAATAGATCAGGCTTTTTATTAGTCTTCCCAAAGGCATTTCATTACATTCCCTGGCCGAATTaGATGCTTGGATTCTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: DEANRSGFLLVFPKAFHYIPWPN*MLGFWD Trigger: ATCCCAGAATCCAAGCATCCAATTCGGCCAGGGAAT...GTAATGAAATGCCTTTGGGAAGACTAATAAAAAGCCTGATCTATTGGCTTCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR TCA 90 bp | ACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGATTTCATCATGCAGTGGTaGGTTTTAACTTATTGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: THRISFLIQRISCSNQQDFIMQW*VLTYCH Trigger: GTGACAATAAGTTAAAACTCACCACTGCATGATGAA...ATCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTATATGTGTAACCTGGGGATATATGATGGAAGTACCAGTGACCAGTAGGGGTTATATGCAGTTAAATTaGCCAGCAGTGATCATATGT | + |
|
Preference number: 2 (lower is better) Translates to: CICVTWGYMMEVPVTSRGYMQLN*PAVIIC Trigger: ACATATGATCACTGCTGGCCAATTTAACTGCATATA...ACCCCTACTGGTCACTGGTACTTCCATCATATATCCCCAGGTTACACATATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTATATGTGTAACCTGGGGATATATGATGGAAGTACCAGTGACCAGTAGGGGTATAAAGGGTTTGTTGTaGTCCATGAATCATGATGAT | + |
|
Preference number: 2 (lower is better) Translates to: CICVTWGYMMEVPVTSRGIKGLL*SMNHDD Trigger: ATCATCATGATTCATGGACCACAACAAACCCTTTAT...ACCCCTACTGGTCACTGGTACTTCCATCATATATCCCCAGGTTACACATATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR TCA 90 bp | ATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTTCTATAAGTGGTAGGGCCATTTaGTTTCTTCTTTCTACCGTG | + |
|
Preference number: 2 (lower is better) Translates to: IKREVGFSKIPETIRVSISGRAI*FLLSTV Trigger: CACGGTAGAAAGAAGAAATCAAATGGCCCTACCACT...TATAGAAACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR TCA 90 bp | AGACTGAGAACGCCATGGAATGTATGCATCTCTTCAACTTTTTACTCCAACCTAGTTTGTTGTGGTCCATaGATCATGATGATACATTTC | + |
|
Preference number: 2 (lower is better) Translates to: RLRTPWNVCISSTFYSNLVCCGP*IMMIHF Trigger: GAAATGTATCATCATGATTCATGGACCACAACAAAC...TAGGTTGGAGTAAAAAGTTGAAGAGATGCATACATTCCATGGCGTTCTCAGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAGGTTGCAGGTGAATACCACATCAACCTCAAGTTTATTTTTCTTAGCTTTCCTCTTATAGTTCCATaGGTCAGTAGGACAAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: GKVAGEYHINLKFIFLSFPLIVP*VSRTRN Trigger: ATTTCTTGTCCTACTGACTCATGGAACTATAAGAGG...AAAGCTAAGAAAAATAAACTTGAGGTTGATGTGGTATTCACCTGCAACCTTCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR CCA 90 bp | AAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCAAGTCTTGTTCTTTTGATATCTGGTGACTaGGAGAGGGAGAGTGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KTSLSCKCYASWYSSLVLLISGD*ERESVF Trigger: AAACACACTCTCCCTCTCCCAGTCACCAGATATCAA...AAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGCATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTTATATGCAGTTAAATTaGCCAGCAGTGATCATATGT | + |
|
Preference number: 2 (lower is better) Translates to: QGIKREVGFSKIPETIRVYMQLN*PAVIIC Trigger: ACATATGATCACTGCTGGCCAATTTAACTGCATATA...AACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAATGCCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGCATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTGAATTCTTTATTCCATaGGGATTTGGGGAAGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: QGIKREVGFSKIPETIRVEFFIP*GFGEDF Trigger: AAAATCTTCCCCAAATCCCCATGGAATAAAGAATTC...AACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAATGCCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR CCA 90 bp | AAATGGCTCCCAATAAGACAGCACCAAAATCTCTCCTTTACTCAGTTCATTCTTAACGTAGGATCCAATTaGTCTTCTGAAATAGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KWLPIRQHQNLSFTQFILNVGSN*SSEIVS Trigger: TGAGACTATTTCAGAAGACCAATTGGATCCTACGTT...AAGAATGAACTGAGTAAAGGAGAGATTTTGGTGCTGTCTTATTGGGAGCCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR TCA 90 bp | AAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCAAGTCTTGTTCTTACATTTCATCAAGGCTaGAAATGCATTCTGAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: KTSLSCKCYASWYSSLVLTFHQG*KCILRE Trigger: TTCTCTCAGAATGCATTTTCAGCCTTGATGAAATGT...AAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR GCA 90 bp | ATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTTCTATAACGCCATGGAATGTATaGATCTCTTCAACTTTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: IKREVGFSKIPETIRVSITPWNV*ISSTFY Trigger: GTAAAAAGTTGAAGAGATGCATACATTCCATGGCGT...TATAGAAACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR TCA 72 bp | GGAACCGAGCTACCCTGCATGAAAATTGTGCACTCTTaGCCCAGAGCCATCTCTGAGCTGTCCACCTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GTELPCMKIVHS*PRAISELSTSH Trigger: ATGGGAGGTGGACAGCTCAGAGATGGCTCTGGGTCAAGAGTGCACAATTTTCATGCAGGGTAGCTCGGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR CCA 72 bp | GAACTCTCGATGATGGCCTGTGACTGCAGAAAGTTCTaGAAGACTTCACTTGCCTTCACCCCTTTCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ELSMMACDCRKF*KTSLAFTPFLG Trigger: TCCCAGGAAAGGGGTGAAGGCAAGTGAAGTCTTCCAGAACTTTCTGCAGTCACAGGCCATCATCGAGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR CCA 72 bp | TCAAGGCTGAAAATGCATTCTGAGAGAAGTCCAGGCTaGCTTGTTGTATGGCATCCACAGTCAGGAAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SRLKMHSERSPG*LVVWHPQSGSH Trigger: GTGGCTTCCTGACTGTGGATGCCATACAACAAGCCAGCCTGGACTTCTCTCAGAATGCATTTTCAGCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR CCA 72 bp | AAACGTCTGATGCATTCCCTGGCCGAATTGGATGCTTaGATTCTGGGATTGTTACCTGGGATCAGCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KRLMHSLAELDA*ILGLLPGISFR Trigger: CCTGAAGCTGATCCCAGGTAACAATCCCAGAATCCAAGCATCCAATTCGGCCAGGGAATGCATCAGACGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTACCAGTGACCAGTAGGGGTCAGAAAACTAAGTCAGATCCCTTGGAGTTACATTCCCTGGCCGAATaGGATGCTTGGATTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EVPVTSRGQKTKSDPLELHSLAE*DAWILG Trigger: TCCCAGAATCCAAGCATCCAATTCGGCCAGGGAATG...TAACTCCAAGGGATCTGACTTAGTTTTCTGACCCCTACTGGTCACTGGTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR TCA 72 bp | ATCCACAGTCAGGAAGCCACAAGTGGTAGGGCCATTTaGTTTCTTCTTTCTACCGTGTTTTCGGTCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: IHSQEATSGRAI*FLLSTVFSVHS Trigger: GCTGTGGACCGAAAACACGGTAGAAAGAAGAAATCAAATGGCCCTACCACTTGTGGCTTCCTGACTGTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR TCA 72 bp | GACCCAGAGCCATCTCTGAGCTGTCCACCTCCCATGTaGCTCTTGGACTCTCTTATCCTCAATACTATCATT | + |
|
Preference number: 3 (lower is better) Translates to: DPEPSLSCPPPM*LLDSLILNTII Trigger: AATGATAGTATTGAGGATAAGAGAGTCCAAGAGTCACATGGGAGGTGGACAGCTCAGAGATGGCTCTGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR CCA 72 bp | AGTTCTGGAAGACTTCACTTGCCTTCACCCCTTTCCTaGGAACCTGCCAGTAGTCATGTTCAATCTTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SSGRLHLPSPLS*EPASSHVQSFP Trigger: GGGAAAAGATTGAACATGACTACTGGCAGGTTCCCAGGAAAGGGGTGAAGGCAAGTGAAGTCTTCCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR GCA 72 bp | AAAGAAACGTCTGATGCATTCCCTGGCCGAATTGGATaGTTGGATTCTGGGATTGTTACCTGGGATCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KETSDAFPGRIG*LDSGIVTWDQL Trigger: AAGCTGATCCCAGGTAACAATCCCAGAATCCAAGCATCCAATTCGGCCAGGGAATGCATCAGACGTTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR CCA 72 bp | TTTTGTTCCTTCGTTAGCTTCTCCAGCATCATGTTATaGTCTTTGATGAGCTGCTCTCTCTCCTGCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FCSFVSFSSIML*SLMSCSLSCSS Trigger: GCTGGAGCAGGAGAGAGAGCAGCTCATCAAAGACCATAACATGATGCTGGAGAAGCTAACGAAGGAACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR CAA 90 bp | ACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGATGCTTGGATTCTGGGATaGTTACCTGGGATCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: THRISFLIQRISCSNQQDAWILG*LPGISF Trigger: GAAGCTGATCCCAGGTAACAATCCCAGAATCCAAGC...ATCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTCATGTTCAATCTTTTCCCTCATGTCCATGTAGAGCCTGTGTCCCCCAGGGTTCTATGTCATGAGTaGGCCATTCAAAGACAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VVMFNLFPHVHVEPVSPRVLCHE*AIQRQN Trigger: GTTTTGTCTTTGAATGGCCAACTCATGACATAGAAC...CCTGGGGGACACAGGCTCTACATGGACATGAGGGAAAAGATTGAACATGACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR CAA 90 bp | TATACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAATCAGCTGCCTCCTTCTaGGTGTGCTTCTCTGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: YTHRISFLIQRISCSNQQSAASF*VCFSAM Trigger: CATTGCAGAGAAGCACACCAAGAAGGAGGCAGCTGA...TTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR CCA 72 bp | GTGTGGGCCATACTAAATTATCCATGGTCTGGTAGATaGTGTCTAATACCCAAGGACATGAGGCCAGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: VWAILNYPWSGR*CLIPKDMRPAL Trigger: TAATGCTGGCCTCATGTCCTTGGGTATTAGACACCATCTACCAGACCATGGATAATTTAGTATGGCCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCAGGAATTGCTGATTTTCGTCTTTGAAGGAATGCTCCATAAAGACAGCGGCCGAATTGGATGCTaGGATTCTGGGATTGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: LLQELLIFVFEGMLHKDSGRIGC*DSGIVT Trigger: GGTAACAATCCCAGAATCCAAGCATCCAATTCGGCC...GCTGTCTTTATGGAGCATTCCTTCAAAGACGAAAATCAGCAATTCCTGAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGAACTTCCATCCCCTTGCATTGAGCCTCAAGTGTATTTCCTCTTATAGTTCCACGCAATTCCTCAGCTaGTGTCTTATATCCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNFHPLALSLKCISSYSSTQFLS*CLISFL Trigger: GAGGAAGGATATAAGACACAAGCTGAGGAATTGCGT...GGAACTATAAGAGGAAATACACTTGAGGCTCAATGCAAGGGGATGGAAGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCAAGTCTTGTTCTTTCCAGGGCTTGGTGGTaGATGGTGTTCATGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KTSLSCKCYASWYSSLVLSRAWW*MVFMLL Trigger: CAACAGCATGAACACCATCAACCACCAAGCCCTGGA...AAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR CCA 72 bp | TGGAAAGTATGGGGCTATGACAGTAGATACGGTTGTTaGCACAAGATACACACTATTAAGCTAGTCAACATC | + |
|
Preference number: 3 (lower is better) Translates to: WKVWGYDSRYGC*HKIHTIKLVNI Trigger: GATGTTGACTAGCTTAATAGTGTGTATCTTGTGCCAACAACCGTATCTACTGTCATAGCCCCATACTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAGGTTGCAGGTGAATACCACATCAACCTCAAGTTTATTTTTCTTAGCTTTCTTGTTCCTTTTCTCTaGAGCCTCCATATACTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GKVAGEYHINLKFIFLSFLVPFL*SLHILL Trigger: CAGGAGTATATGGAGGCTCAAGAGAAAAGGAACAAG...AAAGCTAAGAAAAATAAACTTGAGGTTGATGTGGTATTCACCTGCAACCTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| 3UTR GCA 72 bp | AACTCAAAGGAAAACATCATTAAGCTGCAAATGTTATaGTTCCTGGTACTCAAGTCTTGTTCTTGGGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: NSKENIIKLQML*FLVLKSCSWVT Trigger: AGTCACCCAAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTTCCTTTGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR CCA 72 bp | TTTCAAAATGTGTTCTCTAAAGGCAAGCATTGTCTGTaGAGACACGTAAGAGCTGTTCTATCTCATTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FQNVFSKGKHCL*RHVRAVLSHFC Trigger: ACAGAAATGAGATAGAACAGCTCTTACGTGTCTCCACAGACAATGCTTGCCTTTAGAGAACACATTTTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR CCA 72 bp | TGCCCTCACAAAACCAATGTAATAAAGGGTTTGTTGTaGTCCATGAATCATGATGATACATTTCATCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CPHKTNVIKGLL*SMNHDDTFHQG Trigger: GCCTTGATGAAATGTATCATCATGATTCATGGACCACAACAAACCCTTTATTACATTGGTTTTGTGAGGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR CCA 72 bp | GCACTCTTCAAGAAATGTATAAGACTGAGAACGCCATaGAATGTATGCATCTCTTCAACTTTTTACTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALFKKCIRLRTP*NVCISSTFYSN Trigger: GTTGGAGTAAAAAGTTGAAGAGATGCATACATTCCATGGCGTTCTCAGTCTTATACATTTCTTGAAGAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR TCA 72 bp | GTGGAAACAATATCACAAGGTAGCTTAAATAATAGCTaGTATACACACAGGATATCCTTTCTTATCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VETISQGSLNNS*YTHRISFLIQR Trigger: CCTCTGGATAAGAAAGGATATCCTGTGTGTATATCAGCTATTATTTAAGCTACCTTGTGATATTGTTTCCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR TCA 72 bp | TGCACTTTCCTTAAACGTAGGATCCAATTGGTCTTCTaGAATAGTCTCAAGTTGTTTTATGAGTTCTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: CTFLKRRIQLVF*NSLKLFYEFYV Trigger: GACATAGAACTCATAAAACAACTTGAGACTATTTCAGAAGACCAATTGGATCCTACGTTTAAGGAAAGTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| CDS-3UTR CCA 90 bp | GTAGTCATGTTCAATCTTTTCCCTCATGTCCATGTAGAGCCTGTGTCCCCCAGGACCAGTGCTCTGGCTTaGTGGGGTGGGGCATGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VVMFNLFPHVHVEPVSPRTSALA*WGGACT Trigger: GGTGCATGCCCCACCCCACCAAGCCAGAGCACTGGT...CCTGGGGGACACAGGCTCTACATGGACATGAGGGAAAAGATTGAACATGACTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| CDS-3UTR TCA 90 bp | TGCATTCTGAGAGAAGTCCAGGCTGGCTTGTTGTATGGCATCCACAGTCAGGAACCTTCTGCCCAGCAGTaGGGGCTGTATCTGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CILREVQAGLLYGIHSQEPSAQQ*GLYLPA Trigger: TGCAGGCAGATACAGCCCTCACTGCTGGGCAGAAGG...TTCCTGACTGTGGATGCCATACAACAAGCCAGCCTGGACTTCTCTCAGAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CCA 90 bp | ACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGATGGAGGACCAGTGCTCTaGCTTGGTGGGGTGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: THRISFLIQRISCSNQQDGGPVL*LGGVGH Trigger: ATGCCCCACCCCACCAAGCCAGAGCACTGGTCCTCC...ATCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR GCA 90 bp | AGACTGAGAACGCCATGGAATGTATGCATCTCTTCAACTTTTTACTCCAACCTAGTCCAGGAGGACCAGTaGTCTGGCTTGGTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLRTPWNVCISSTFYSNLVQEDQ*SGLVGW Trigger: CCACCCCACCAAGCCAGAGCACTGGTCCTCCTGGAC...TAGGTTGGAGTAAAAAGTTGAAGAGATGCATACATTCCATGGCGTTCTCAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR GCA 90 bp | CAAGGCATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTGTCCAGGAGGACCAGTaGTCTGGCTTGGTGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGIKREVGFSKIPETIRVVQEDQ*SGLVGW Trigger: CCACCCCACCAAGCCAGAGCACTGGTCCTCCTGGAC...AACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAATGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR GCA 90 bp | TGCATTCTGAGAGAAGTCCAGGCTGGCTTGTTGTATGGCATCCACAGTCAGGAAAGGGCTGTATCTGCCTaGAAGATGGAACTCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: CILREVQAGLLYGIHSQERAVSA*KMELSM Trigger: CATCGAGAGTTCCATCTTGCAGGCAGATACAGCCCT...TTCCTGACTGTGGATGCCATACAACAAGCCAGCCTGGACTTCTCTCAGAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTACCAGTGACCAGTAGGGGTCAGAAAACTAAGTCAGATCCCTTGGAGTTAAGCTGCTCTCTCTCCTaGTCCAGCTTCCTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EVPVTSRGQKTKSDPLELSCSLS*SSFLLS Trigger: ACTGAGAAGGAAGCTGGAGCAGGAGAGAGAGCAGCT...TAACTCCAAGGGATCTGACTTAGTTTTCTGACCCCTACTGGTCACTGGTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CCA 90 bp | ACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGATCCAGAGGGAAACCTTTaGCTGGTAGGCAGCGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: THRISFLIQRISCSNQQDPEGNL*LVGSVP Trigger: TGGCACGCTGCCTACCAGCCAAAGGTTTCCCTCTGG...ATCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CCA 90 bp | CACCAGCTTCTTCAGGAATTGCTGATTTTCGTCTTTGAAGGAATGCTCCATAAAAGTGCTCTGGCTTGGTaGGGTGGGGCATGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: HQLLQELLIFVFEGMLHKSALAW*GGACTT Trigger: TGTGGTGCATGCCCCACCCCACCAAGCCAGAGCACT...TTTATGGAGCATTCCTTCAAAGACGAAAATCAGCAATTCCTGAAGAAGCTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| CDS-3UTR CCA 90 bp | AAATGGCTCCCAATAAGACAGCACCAAAATCTCTCCTTTACTCAGTTCATTCTTACCAGTGCTCTGGCTTaGTGGGGTGGGGCATGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KWLPIRQHQNLSFTQFILTSALA*WGGACT Trigger: GGTGCATGCCCCACCCCACCAAGCCAGAGCACTGGT...AAGAATGAACTGAGTAAAGGAGAGATTTTGGTGCTGTCTTATTGGGAGCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR CCA 90 bp | AAATGGCTCCCAATAAGACAGCACCAAAATCTCTCCTTTACTCAGTTCATTCTTGGAGGACCAGTGCTCTaGCTTGGTGGGGTGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KWLPIRQHQNLSFTQFILGGPVL*LGGVGH Trigger: ATGCCCCACCCCACCAAGCCAGAGCACTGGTCCTCC...AAGAATGAACTGAGTAAAGGAGAGATTTTGGTGCTGTCTTATTGGGAGCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR CAA 72 bp | TCCTTCGTTAGCTTCTCCAGCATCATGTTATGGTCTTaGATGAGCTGCTCTCTCTCCTGCTCCAGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFVSFSSIMLWS*MSCSLSCSSFL Trigger: AAGGAAGCTGGAGCAGGAGAGAGAGCAGCTCATCAAAGACCATAACATGATGCTGGAGAAGCTAACGAAGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTATCTCATTTCTGTGGGGCCCAGATGCCCTTTAATCAGCACTTTTTATCTTGGTGTGCTTCTCTaGAATGGCCTTCTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFYLISVGPRCPLISTFYLGVLL*NGLLPS Trigger: GCTGGGCAGAAGGCCATTGCAGAGAAGCACACCAAG...ATAAAAAGTGCTGATTAAAGGGCATCTGGGCCCCACAGAAATGAGATAGAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGTTGCAGGTGAATACCACATCAACCTCAAGTTTATTTTTCTTAGCTTTAGTGCTCTGGCTTGGTaGGGTGGGGCATGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: GKVAGEYHINLKFIFLSFSALAW*GGACTT Trigger: TGTGGTGCATGCCCCACCCCACCAAGCCAGAGCACT...AAAGCTAAGAAAAATAAACTTGAGGTTGATGTGGTATTCACCTGCAACCTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR CCA 90 bp | GCTGATATACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCGCTCACTGTAGTGGCTaGCTGCCTTCTGCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ADIHTGYPFLSRGFPVPTAHCSG*LPSAQL Trigger: TAGCTGTGCAGAAGGCAGCCAGCCACTACAGTGAGC...GGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTATATCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTATCTCATTTCTGTGGGGCCCAGATGCCCTTTAATCAGCACTTTTTATTGGTCTTTGATGAGCTaGTCTCTCTCCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFYLISVGPRCPLISTFYWSLMS*SLSCSS Trigger: GCTGGAGCAGGAGAGAGAGCAGCTCATCAAAGACCA...ATAAAAAGTGCTGATTAAAGGGCATCTGGGCCCCACAGAAATGAGATAGAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| 3UTR CAA 72 bp | TTAGGAAAGAAACGTCTGATGCATTCCCTGGCCGAATaGGATGCTTGGATTCTGGGATTGTTACCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LGKKRLMHSLAE*DAWILGLLPGI Trigger: GATCCCAGGTAACAATCCCAGAATCCAAGCATCCAATTCGGCCAGGGAATGCATCAGACGTTTCTTTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| CDS-3UTR GCA 90 bp | TGCATTCTGAGAGAAGTCCAGGCTGGCTTGTTGTATGGCATCCACAGTCAGGAAAGAAGCAAAAGCCATTaGACTTTCCTTAAACGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CILREVQAGLLYGIHSQERSKSH*TFLKRR Trigger: CCTACGTTTAAGGAAAGTGCAATGGCTTTTGCTTCT...TTCCTGACTGTGGATGCCATACAACAAGCCAGCCTGGACTTCTCTCAGAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR GCA 90 bp | AGACTGAGAACGCCATGGAATGTATGCATCTCTTCAACTTTTTACTCCAACCTATGGCTGGCTGCCTTCTaGACAGCTACTGAGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLRTPWNVCISSTFYSNLWLAAF*TATEFS Trigger: TGAGAACTCAGTAGCTGTGCAGAAGGCAGCCAGCCA...TAGGTTGGAGTAAAAAGTTGAAGAGATGCATACATTCCATGGCGTTCTCAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| 3UTR CAA 72 bp | ATCCAGAGGATTTCCTGTTCCAACCAGCAAGATGAATaGAACTTCCATCCCCTTGCATTGAGCCTCAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IQRISCSNQQDE*NFHPLALSLKC Trigger: ACACTTGAGGCTCAATGCAAGGGGATGGAAGTTCAATTCATCTTGCTGGTTGGAACAGGAAATCCTCTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR CAA 72 bp | TCCCAGTTGATGGATCTCTCGACGCAATTCCTCAGCTaGTGTCTTATATCCTTCCTCACGGAAAGTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLMDLSTQFLS*CLISFLTESLL Trigger: CAAAAGACTTTCCGTGAGGAAGGATATAAGACACAAGCTGAGGAATTGCGTCGAGAGATCCATCAACTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| CDS-3UTR TCA 90 bp | AAGACAAAACACTTCCGATTAGGAAAGAAACGTCTGATGCATTCCCTGGCCGAAACTACTACCACTGGCTaGGAAATCTTGTCCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: KTKHFRLGKKRLMHSLAETTTTG*EILSRI Trigger: GATTCTGGACAAGATTTCTCAGCCAGTGGTAGTAGT...TTCGGCCAGGGAATGCATCAGACGTTTCTTTCCTAATCGGAAGTGTTTTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| CDS-3UTR CCA 90 bp | TACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGAATTCCCTGGCCGAATTaGATGCTTGGATTCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YTQDILSYPEDFLFQPARIPWPN*MLGFWD Trigger: ATCCCAGAATCCAAGCATCCAATTCGGCCAGGGAAT...TCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR TCA 90 bp | TTGAACTTCCATCCCCTTGCATTGAGCCTCAAGTGTATTTCCTCTTATAGTTCCACTACTACCACTGGCTaGGAAATCTTGTCCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LNFHPLALSLKCISSYSSTTTTG*EILSRI Trigger: GATTCTGGACAAGATTTCTCAGCCAGTGGTAGTAGT...GGAACTATAAGAGGAAATACACTTGAGGCTCAATGCAAGGGGATGGAAGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR GCA 90 bp | TTGAACTTCCATCCCCTTGCATTGAGCCTCAAGTGTATTTCCTCTTATAGTTCCATGATGGCCTGTGACTaGAGAAAGTTCTGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LNFHPLALSLKCISSYSSMMACD*RKFWKT Trigger: AGTCTTCCAGAACTTTCTGCAGTCACAGGCCATCAT...GGAACTATAAGAGGAAATACACTTGAGGCTCAATGCAAGGGGATGGAAGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCTATCTCATTTCTGTGGGGCCCAGATGCCCTTTAATCAGCACTTTTTATGACTGCAGAAAGTTCTaGAAGACTTCACTTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFYLISVGPRCPLISTFYDCRKF*KTSLAF Trigger: GAAGGCAAGTGAAGTCTTCCAGAACTTTCTGCAGTC...ATAAAAAGTGCTGATTAAAGGGCATCTGGGCCCCACAGAAATGAGATAGAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR TCA 90 bp | GATGAAGCCAATAGATCAGGCTTTTTATTAGTCTTCCCAAAGGCATTTCATTACCTCGATGATGGCCTGTaGCTGCAGAAAGTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DEANRSGFLLVFPKAFHYLDDGL*LQKVLE Trigger: TTCCAGAACTTTCTGCAGTCACAGGCCATCATCGAG...GTAATGAAATGCCTTTGGGAAGACTAATAAAAAGCCTGATCTATTGGCTTCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR GCA 90 bp | AAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCAAGTCTTGTTCTTTTCCTTCTCGCAGGCTaGATGTACATCCAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTSLSCKCYASWYSSLVLFLLAG*MYIQQL Trigger: GAGCTGCTGGATGTACATGCAGCCTGCGAGAAGGAA...AAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| 3UTR CAA 72 bp | AACCAGCAAGATGAATTGAACTTCCATCCCCTTGCATaGAGCCTCAAGTGTATTTCCTCTTATAGTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NQQDELNFHPLA*SLKCISSYSSM Trigger: CATGGAACTATAAGAGGAAATACACTTGAGGCTCAATGCAAGGGGATGGAAGTTCAATTCATCTTGCTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR CCA 90 bp | GCTGATATACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCGACAGCTGTTCATTGTaGTTTTCCACAAGACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: ADIHTGYPFLSRGFPVPTDSCSL*FSTRQM Trigger: CATTTGTCTTGTGGAAAACCACAATGAACAGCTGTC...GGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGTATATCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR CCA 90 bp | ACACACAGGATATCCTTTCTTATCCAGAGGATTTCCTGTTCCAACCAGCAAGATAACTCACAAACTCTGTaGAATTCTTTATTCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: THRISFLIQRISCSNQQDNSQTL*NSLFHG Trigger: CCCATGGAATAAAGAATTCCACAGAGTTTGTGAGTT...ATCTTGCTGGTTGGAACAGGAAATCCTCTGGATAAGAAAGGATATCCTGTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CCA 90 bp | GATGAAGCCAATAGATCAGGCTTTTTATTAGTCTTCCCAAAGGCATTTCATTACTGGATGCTTGGATTCTaGGATTGTTACCTGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: DEANRSGFLLVFPKAFHYWMLGF*DCYLGS Trigger: TGATCCCAGGTAACAATCCCAGAATCCAAGCATCCA...GTAATGAAATGCCTTTGGGAAGACTAATAAAAAGCCTGATCTATTGGCTTCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| 3UTR CAA 72 bp | CATGGTCCTCATAGGAGTACAGAAAACCTTGTTTTCTaGCTGAATCTATATGCAGTTAAATTGGCCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HGPHRSTENLVF*LNLYAVKLASS Trigger: ACTGCTGGCCAATTTAACTGCATATAGATTCAGCAAGAAAACAAGGTTTTCTGTACTCCTATGAGGACCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR GCA 90 bp | GATGAAGCCAATAGATCAGGCTTTTTATTAGTCTTCCCAAAGGCATTTCATTACATTTGGGGAAGATTTTaGTCTGATCAGCTCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DEANRSGFLLVFPKAFHYIWGRF*SDQLSE Trigger: CTCACTGAGCTGATCAGAGCAAAATCTTCCCCAAAT...GTAATGAAATGCCTTTGGGAAGACTAATAAAAAGCCTGATCTATTGGCTTCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CCA 90 bp | AGACTGAGAACGCCATGGAATGTATGCATCTCTTCAACTTTTTACTCCAACCTAAACGTAGGATCCAATTaGTCTTCTGAAATAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLRTPWNVCISSTFYSNLNVGSN*SSEIVS Trigger: TGAGACTATTTCAGAAGACCAATTGGATCCTACGTT...TAGGTTGGAGTAAAAAGTTGAAGAGATGCATACATTCCATGGCGTTCTCAGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CCA 90 bp | AAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCAAGTCTTGTTCTTCGATCCAGTTCTTCCTaGCAGTATTTATCAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTSLSCKCYASWYSSLVLRSSSS*QYLSDA Trigger: GGCATCTGATAAATACTGCCAGGAAGAACTGGATCG...AAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTTCTATAGACAGCTGTTCATTGTaGTTTTCCACAAGACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: IKREVGFSKIPETIRVSIDSCSL*FSTRQM Trigger: CATTTGTCTTGTGGAAAACCACAATGAACAGCTGTC...TATAGAAACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR TCA 90 bp | AAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCAAGTCTTGTTCTTTTCTTCAGGAATTGCTaGTTTTCGTCTTTGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTSLSCKCYASWYSSLVLFFRNC*FSSLKE Trigger: TTCCTTCAAAGACGAAAATCAGCAATTCCTGAAGAA...AAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CCA 90 bp | GATGAAGCCAATAGATCAGGCTTTTTATTAGTCTTCCCAAAGGCATTTCATTACGAATTCTTTATTCCATaGGGATTTGGGGAAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: DEANRSGFLLVFPKAFHYEFFIP*GFGEDF Trigger: AAAATCTTCCCCAAATCCCCATGGAATAAAGAATTC...GTAATGAAATGCCTTTGGGAAGACTAATAAAAAGCCTGATCTATTGGCTTCATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| 3UTR CAA 72 bp | AGGAAATGCCCTCACAAAACCAATGTAATAAAGGGTTaGTTGTGGTCCATGAATCATGATGATACATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKCPHKTNVIKG*LWSMNHDDTFH Trigger: ATGAAATGTATCATCATGATTCATGGACCACAACAAACCCTTTATTACATTGGTTTTGTGAGGGCATTTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| 3UTR CAA 72 bp | GAACAGAAAATGTTGAGATATTGTCCATCAAATCCTTaGAAAGTCGATCCAGTTCTTCCTGGCAGTATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: EQKMLRYCPSNP*KVDPVLPGSIY Trigger: ATAAATACTGCCAGGAAGAACTGGATCGACTTTCAAAGGATTTGATGGACAATATCTCAACATTTTCTGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196204.5 |
||
| CDS-3UTR CAA 90 bp | TGCATTCTGAGAGAAGTCCAGGCTGGCTTGTTGTATGGCATCCACAGTCAGGAAGACCAGTGCTCTGGCTaGGTGGGGTGGGGCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CILREVQAGLLYGIHSQEDQCSG*VGWGMH Trigger: GTGCATGCCCCACCCCACCAAGCCAGAGCACTGGTC...TTCCTGACTGTGGATGCCATACAACAAGCCAGCCTGGACTTCTCTCAGAATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS-3UTR CAA 90 bp | AGACTGAGAACGCCATGGAATGTATGCATCTCTTCAACTTTTTACTCCAACCTAGACCAGTGCTCTGGCTaGGTGGGGTGGGGCATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLRTPWNVCISSTFYSNLDQCSG*VGWGMH Trigger: GTGCATGCCCCACCCCACCAAGCCAGAGCACTGGTC...TAGGTTGGAGTAAAAAGTTGAAGAGATGCATACATTCCATGGCGTTCTCAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
||
| CDS TCA 90 bp | TTCCCTGTATGGGACCATCCAACAATAGCCACTACTACCACTGGCTaGGAAATCTTGTCCAGAATCTCTATGGCTTCCTGGTTCACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FPVWDHPTIATTTTG*EILSRISMASWFTD Trigger: GTCAGTGAACCAGGAAGCCATAGAGATTCTGGACAAGATTTCTCAGCCAGTGGTAGTAGTGGCTATTGTTGGATGGTCCCATACAGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 ENSMUST00000197799.2 |
||
| CDS-3UTR CAA 90 bp | AAATGGCTCCCAATAAGACAGCACCAAAATCTCTCCTTTACTCAGTTCATTCTTTCCAGGGCTTGGTGGTaGATGGTGTTCATGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KWLPIRQHQNLSFTQFILSRAWW*MVFMLL Trigger: CAACAGCATGAACACCATCAACCACCAAGCCCTGGA...AAGAATGAACTGAGTAAAGGAGAGATTTTGGTGCTGTCTTATTGGGAGCCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGTTGCAGGTGAATACCACATCAACCTCAAGTTTATTTTTCTTAGCTTTCATTCCCTGGCCGAATaGGATGCTTGGATTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKVAGEYHINLKFIFLSFHSLAE*DAWILG Trigger: TCCCAGAATCCAAGCATCCAATTCGGCCAGGGAATG...AAAGCTAAGAAAAATAAACTTGAGGTTGATGTGGTATTCACCTGCAACCTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CAA 90 bp | CTCCATAGGAATTGTTTCAAAATGTGTTCTCTAAAGGCAAGCATTGTCTGTGGAGGCCGAATTGGATGCTaGGATTCTGGGATTGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: LHRNCFKMCSLKASIVCGGRIGC*DSGIVT Trigger: GGTAACAATCCCAGAATCCAAGCATCCAATTCGGCC...TCCACAGACAATGCTTGCCTTTAGAGAACACATTTTGAAACAATTCCTATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CAA 90 bp | GAAGTACCAGTGACCAGTAGGGGTCAGAAAACTAAGTCAGATCCCTTGGAGTTACAGCTTCTTCAGGAATaGCTGATTTTCGTCTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EVPVTSRGQKTKSDPLELQLLQE*LIFVFE Trigger: TTCAAAGACGAAAATCAGCAATTCCTGAAGAAGCTG...TAACTCCAAGGGATCTGACTTAGTTTTCTGACCCCTACTGGTCACTGGTACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CAA 90 bp | AAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCAAGTCTTGTTCTTTCAGCTGCCTCCTTCTaGGTGTGCTTCTCTGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KTSLSCKCYASWYSSLVLSAASF*VCFSAM Trigger: CATTGCAGAGAAGCACACCAAGAAGGAGGCAGCTGA...AAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
||
| CDS-3UTR CAA 90 bp | AAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCAAGTCTTGTTCTTGCTTGGATTCTGGGATaGTTACCTGGGATCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: KTSLSCKCYASWYSSLVLAWILG*LPGISF Trigger: GAAGCTGATCCCAGGTAACAATCCCAGAATCCAAGC...AAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
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| CDS-3UTR CAA 90 bp | GGGAAGGTTGCAGGTGAATACCACATCAACCTCAAGTTTATTTTTCTTAGCTTTACTGACAGCTGTTCATaGTGGTTTTCCACAAGACAA | + |
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Preference number: 5 (lower is better) Translates to: GKVAGEYHINLKFIFLSFTDSCS*WFSTRQ Trigger: TTGTCTTGTGGAAAACCACAATGAACAGCTGTCAGT...AAAGCTAAGAAAAATAAACTTGAGGTTGATGTGGTATTCACCTGCAACCTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| CDS-3UTR CAA 90 bp | GATGAAGCCAATAGATCAGGCTTTTTATTAGTCTTCCCAAAGGCATTTCATTACACGCAATTCCTCAGCTaGTGTCTTATATCCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: DEANRSGFLLVFPKAFHYTQFLS*CLISFL Trigger: GAGGAAGGATATAAGACACAAGCTGAGGAATTGCGT...GTAATGAAATGCCTTTGGGAAGACTAATAAAAAGCCTGATCTATTGGCTTCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
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| CDS-3UTR CAA 90 bp | ATTAAGAGAGAAGTAGGCTTCTCCAAGATTCCAGAAACCATAAGAGTTTCTATAACTGACAGCTGTTCATaGTGGTTTTCCACAAGACAA | + |
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Preference number: 5 (lower is better) Translates to: IKREVGFSKIPETIRVSITDSCS*WFSTRQ Trigger: TTGTCTTGTGGAAAACCACAATGAACAGCTGTCAGT...TATAGAAACTCTTATGGTTTCTGGAATCTTGGAGAAGCCTACTTCTCTCTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 |
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| CDS-3UTR CAA 90 bp | AAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCAAGTCTTGTTCTTGTTCTATGTCATGAGTaGGCCATTCAAAGACAAAAC | + |
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Preference number: 5 (lower is better) Translates to: KTSLSCKCYASWYSSLVLVLCHE*AIQRQN Trigger: GTTTTGTCTTTGAATGGCCAACTCATGACATAGAAC...AAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100962.8 |
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| CDS TCA 72 bp | TGGGACCATCCAACAATAGCCACTACTACCACTGGCTaGGAAATCTTGTCCAGAATCTCTATGGCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WDHPTIATTTTG*EILSRISMASW Trigger: CCAGGAAGCCATAGAGATTCTGGACAAGATTTCTCAGCCAGTGGTAGTAGTGGCTATTGTTGGATGGTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 ENSMUST00000197799.2 |
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| CDS CAA 90 bp | TTGTCCAGAATCTCTATGGCTTCCTGGTTCACTGACAGCTGTTCATaGTGGTTTTCCACAAGACAAATGGGAGCCATTTGTGGTTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LSRISMASWFTDSCS*WFSTRQMGAICGWV Trigger: GACCCAACCACAAATGGCTCCCATTTGTCTTGTGGAAAACCACAATGAACAGCTGTCAGTGAACCAGGAAGCCATAGAGATTCTGGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 ENSMUST00000197799.2 |
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| CDS CAA 72 bp | ATCTCTATGGCTTCCTGGTTCACTGACAGCTGTTCATaGTGGTTTTCCACAAGACAAATGGGAGCCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: ISMASWFTDSCS*WFSTRQMGAIC Trigger: ACAAATGGCTCCCATTTGTCTTGTGGAAAACCACAATGAACAGCTGTCAGTGAACCAGGAAGCCATAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100962.8 ENSMUST00000196204.5 ENSMUST00000197799.2 |
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