Pregenerated sensors for GBP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028268Ensembl transcript IDs: ENSMUST00000029935.14, ENSMUST00000106221.8, ENSMUST00000106222.9
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGACTGGCCTCCCTCTTTATTATTTAGATAACATCACTGAAATTTaGCAGGATTTATGGACGCCAGACCCTTATATTCTTCAATCATTG | + |
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Preference number: 1 (lower is better) Translates to: LTGLPLYYLDNITEI*QDLWTPDPYILQSL Trigger: CAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATCCTGTCAAATTTCAGTGATGTTATCTAAATAATAAAGAGGGAGGCCAGTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| 3UTR-3UTR TCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCAACATCACTGAAATTTaGCAGGATTTATGGACGCCA | + |
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Preference number: 2 (lower is better) Translates to: NLSVVYNWDTYANVSSFGNITEI*QDLWTP Trigger: TGGCGTCCATAAATCCTGTCAAATTTCAGTGATGTT...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| 3UTR CCA 72 bp | GTACAACTGGGATACATATGCCAATGTGTCTTCATTTaGCCATGTTTCTGTTTGATTTACTTACATCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: VQLGYICQCVFI*PCFCLIYLHLF Trigger: GAAAAGATGTAAGTAAATCAAACAGAAACATGGCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| 3UTR TCA 72 bp | CTCCCTCTTTATTATTTAGATAACATCACTGAAATTTaGCAGGATTTATGGACGCCAGACCCTTATATTCTT | + |
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Preference number: 3 (lower is better) Translates to: LPLYYLDNITEI*QDLWTPDPYIL Trigger: AAGAATATAAGGGTCTGGCGTCCATAAATCCTGTCAAATTTCAGTGATGTTATCTAAATAATAAAGAGGGAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCGACCAGGGTGTGTGTTaGCTTGGTGGGATGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGDQGVC*LGGMGH Trigger: GTGCCCCATCCCACCAAGCCAACACACACCCTGGTC...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAGACCAGGGTGTGTGTTaGCTTGGTGGGATGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLDQGVC*LGGMGH Trigger: GTGCCCCATCCCACCAAGCCAACACACACCCTGGTC...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTGTCACAAAATGCAGCTaGTCCAGGGCCTGCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSVTKCS*SRACWL Trigger: CAACCAGCAGGCCCTGGAGCAGCTGCATTTTGTGAC...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTTTCTCACAGGCTGCATaGACAGTCAGCAGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSFSQAA*TVSSSW Trigger: CCAGGAGCTGCTGACTGTGCATGCAGCCTGTGAGAA...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCTCCAGCATCTTCTCCTaGTCCCTCAGCAGCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGSSIFS*SLSSIS Trigger: GGAGATGCTGCTGAGGGAGCAGGAGAAGATGCTGGA...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTTCCAGCATCTTCTCCTaGTCCCTCAGCAGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSSSIFS*SLSSIS Trigger: GGAGATGCTGCTGAGGGAGCAGGAGAAGATGCTGGA...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCCCCAAGGAGAAGCCATaGTTCCGTCCTGCAAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGPKEKP*FRPARR Trigger: TCGTCTTGCAGGACGGAACCATGGCTTCTCCTTGGG...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACATGGAGTTCTCACGCTaGGCCAGGGTTGTCACTGCG | + |
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Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNMEFSR*ARVVTA Trigger: CGCAGTGACAACCCTGGCCCAGCGTGAGAACTCCAT...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAGTCACAAAATGCAGCTaGTCCAGGGCCTGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLVTKCS*SRACWL Trigger: CAACCAGCAGGCCCTGGAGCAGCTGCATTTTGTGAC...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACTTCTCACAGGCTGCATaGACAGTCAGCAGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNFSQAA*TVSSSW Trigger: CCAGGAGCTGCTGACTGTGCATGCAGCCTGTGAGAA...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTATTCTCACAGGCTGCATaGACAGTCAGCAGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLFSQAA*TVSSSW Trigger: CCAGGAGCTGCTGACTGTGCATGCAGCCTGTGAGAA...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTTTCCTTCTCACAGGCTaGATGCACAGTCAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSFLLTG*MHSQQL Trigger: GAGCTGCTGACTGTGCATGCAGCCTGTGAGAAGGAA...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCTGCTCCTTCTGTCTCTaGCTCAGCAGCTCTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGCSFCL*LSSSSS Trigger: GGAACTAGAGCTGCTGAGGCAGAGACAGAAGGAGCA...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCTGGACCTTCAGCTTGTaGTCCAGCATCTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGWTFSL*SSIFSC Trigger: GCAGGAGAAGATGCTGGAGCACAAGCTGAAGGTCCA...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCCCAAGGAGAAGCCATaGTTCCGTCCTGCAAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNPKEKP*FRPARR Trigger: TCGTCTTGCAGGACGGAACCATGGCTTCTCCTTGGG...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR TCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTCTGCAAGACGATTCATaGGGTAGGACTTCCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSLQDDS*GRTSLY Trigger: GTACAGGGAAGTCCTACCTCATGAATCGTCTTGCAG...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCCACCACCAGAGGCTGTaGTATCTGCTCAAGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGHHQRL*YLLKNP Trigger: AGGATTCTTGAGCAGATAGCACAGCCTCTGGTGGTG...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAAAGCTCCACAGGAGATaGTCTTCCTCAGGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLKLHRR*SSSGTL Trigger: CAGAGTCCCTGAGGAAGAGCATCTCCTGTGGAGCTT...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACAAGCTCCACAGGAGATaGTCTTCCTCAGGGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNKLHRR*SSSGTL Trigger: CAGAGTCCCTGAGGAAGAGCATCTCCTGTGGAGCTT...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTATGCTCCTTCTGTCTCTaGCTCAGCAGCTCTAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLCSFCL*LSSSSS Trigger: GGAACTAGAGCTGCTGAGGCAGAGACAGAAGGAGCA...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTTCCATCACTTGCTCTTaGTCCTTCTGTCTCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSSITCS*SFCLCL Trigger: GAGGCAGAGACAGAAGGAGCAAGAGCAAGTGATGGA...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTATGGACCTTCAGCTTGTaGTCCAGCATCTTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLWTFSL*SSIFSC Trigger: GCAGGAGAAGATGCTGGAGCACAAGCTGAAGGTCCA...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACTGGACCTTCAGCTTGTaGTCCAGCATCTTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNWTFSL*SSIFSC Trigger: GCAGGAGAAGATGCTGGAGCACAAGCTGAAGGTCCA...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTTTTCGGATTGCACTGTaGAGCCCAAGGAGAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSFRIAL*SPRRSH Trigger: ATGGCTTCTCCTTGGGCTCCACAGTGCAATCCGAAA...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCACCACCAGCTTCTTCTaGAACTCCTGCTCATCATCC | + |
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Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGTTSFF*NSCSSS Trigger: GGATGATGAGCAGGAGTTCCAGAAGAAGCTGGTGGT...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR TCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCGGTACTCATCTTCTGTaGTGGGCCGACCATTTAACT | + |
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Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGGTHLL*WADHLT Trigger: AGTTAAATGGTCGGCCCATCACAGAAGATGAGTACC...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTACACCACCAGAGGCTGTaGTATCTGCTCAAGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLHHQRL*YLLKNP Trigger: AGGATTCTTGAGCAGATAGCACAGCCTCTGGTGGTG...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAAATTCAGTCACAAAATaGAGCTGCTCCAGGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLNSVTK*SCSRAC Trigger: GCAGGCCCTGGAGCAGCTGCATTTTGTGACTGAATT...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR GCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACTCCATCACTTGCTCTTaGTCCTTCTGTCTCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNSITCS*SFCLCL Trigger: GAGGCAGAGACAGAAGGAGCAAGAGCAAGTGATGGA...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACTTTCGGATTGCACTGTaGAGCCCAAGGAGAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNFRIAL*SPRRSH Trigger: ATGGCTTCTCCTTGGGCTCCACAGTGCAATCCGAAA...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAACCACCAGCTTCTTCTaGAACTCCTGCTCATCATCC | + |
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Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLTTSFF*NSCSSS Trigger: GGATGATGAGCAGGAGTTCCAGAAGAAGCTGGTGGT...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR TCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTTGGACTGTTGGACTTTaGGATTGTCTCCTTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSWTVGL*DCLLGS Trigger: TGATCCAAGGAGACAATCTCAAAGTCCAACAGTCCA...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR TCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCCTTCGTTCTGTCGTATaGACTCTTCCTTCCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGLRSVV*TLPSFP Trigger: AGGAAAGGAAGGAAGAGTTCATACGACAGAACGAAG...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR TCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTTGTAAGAGCTTTGTCTaGCTGCAAGATAGAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSCKSFV*LQDRVL Trigger: GAGGACTCTATCTTGCAGTCAGACAAAGCTCTTACA...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR TCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCTGTAAGAGCTTTGTCTaGCTGCAAGATAGAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGCKSFV*LQDRVL Trigger: GAGGACTCTATCTTGCAGTCAGACAAAGCTCTTACA...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR TCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTATGGTGTCAAGGATTTaGCCAAACAGTGAGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSMVSRI*PNSEGF Trigger: GAAACCCTCACTGTTTGGTCAAATCCTTGACACCAT...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACACATCCAGATACCCTTaGTTTCGGATTGCACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNTSRYP*FRIALW Trigger: CCACAGTGCAATCCGAAACCAAGGGTATCTGGATGT...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTTTGAGATTGTCTCCTTaGATCAGCTTCAGGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSLRLSP*ISFRAF Trigger: GAATGCCCTGAAGCTGATCCAAGGAGACAATCTCAA...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCGCTCAATCTTCTTCCTaGCTTCTAAGTAGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGAQSSS*LLSRGC Trigger: ACAGCCTCTACTTAGAAGCCAGGAAGAAGATTGAGC...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTATGGACTGTTGGACTTTaGGATTGTCTCCTTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLWTVGL*DCLLGS Trigger: TGATCCAAGGAGACAATCTCAAAGTCCAACAGTCCA...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTCGTTCTGTCGTATaGACTCTTCCTTCCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNLRSVV*TLPSFP Trigger: AGGAAAGGAAGGAAGAGTTCATACGACAGAACGAAG...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCACTGTAGGAAACTCTTaGGAACCTCTTTTGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGTVGNS*EPLLPS Trigger: TGAAGGCAAAAGAGGTTCTCAAGAGTTTCCTACAGT...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTACTGTAGGAAACTCTTaGGAACCTCTTTTGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSTVGNS*EPLLPS Trigger: TGAAGGCAAAAGAGGTTCTCAAGAGTTTCCTACAGT...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTATGTAAGAGCTTTGTCTaGCTGCAAGATAGAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLCKSFV*LQDRVL Trigger: GAGGACTCTATCTTGCAGTCAGACAAAGCTCTTACA...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCGATTTGACCAAACAGTaGGGGTTTCCTTCTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGDLTKQ*GFPSCS Trigger: AGAACAAGAAGGAAACCCTCACTGTTTGGTCAAATC...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAATGGTGTCAAGGATTTaGCCAAACAGTGAGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLMVSRI*PNSEGF Trigger: GAAACCCTCACTGTTTGGTCAAATCCTTGACACCAT...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR GCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCGTGACGAATAGATGCTaGTTCGTTCTGTCGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGVTNRC*FVLSYE Trigger: TTCATACGACAGAACGAAGCAGCATCTATTCGTCAC...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCAACCTACAAACTCACTaGAGTCCTTCACTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGNLQTH*SPSLCP Trigger: AGGACAAAGTGAAGGACTCCAGTGAGTTTGTAGGTT...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTAGCCCAGATAAAGTCTaGGAAGAAACCTACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSSPDKV*EETYKL Trigger: GAGTTTGTAGGTTTCTTCCCAGACTTTATCTGGGCT...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACTTGAGATTGTCTCCTTaGATCAGCTTCAGGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNLRLSP*ISFRAF Trigger: GAATGCCCTGAAGCTGATCCAAGGAGACAATCTCAA...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTATTGAGATTGTCTCCTTaGATCAGCTTCAGGGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLLRLSP*ISFRAF Trigger: GAATGCCCTGAAGCTGATCCAAGGAGACAATCTCAA...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAGCTCAATCTTCTTCCTaGCTTCTAAGTAGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLAQSSS*LLSRGC Trigger: ACAGCCTCTACTTAGAAGCCAGGAAGAAGATTGAGC...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACATAAGCAGTTCTTCTTaGACCTTCAGCTTGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNISSSS*TFSLCS Trigger: GGAGCACAAGCTGAAGGTCCAAGAAGAACTGCTTAT...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAATAAGCAGTTCTTCTTaGACCTTCAGCTTGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLISSSS*TFSLCS Trigger: GGAGCACAAGCTGAAGGTCCAAGAAGAACTGCTTAT...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCGGAACAGAATTTTTCTaGTTCAACCTGGAAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGGTEFF*FNLEIP Trigger: CGGAATTTCCAGGTTGAATCAGAAAAATTCTGTTCC...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTGGAACAGAATTTTTCTaGTTCAACCTGGAAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSGTEFF*FNLEIP Trigger: CGGAATTTCCAGGTTGAATCAGAAAAATTCTGTTCC...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAGATTTGACCAAACAGTaGGGGTTTCCTTCTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLDLTKQ*GFPSCS Trigger: AGAACAAGAAGGAAACCCTCACTGTTTGGTCAAATC...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR GCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACGTGACGAATAGATGCTaGTTCGTTCTGTCGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNVTNRC*FVLSYE Trigger: TTCATACGACAGAACGAAGCAGCATCTATTCGTCAC...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACAACCTACAAACTCACTaGAGTCCTTCACTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNNLQTH*SPSLCP Trigger: AGGACAAAGTGAAGGACTCCAGTGAGTTTGTAGGTT...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAAACCTACAAACTCACTaGAGTCCTTCACTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLNLQTH*SPSLCP Trigger: AGGACAAAGTGAAGGACTCCAGTGAGTTTGTAGGTT...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACAGCCCAGATAAAGTCTaGGAAGAAACCTACAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNSPDKV*EETYKL Trigger: GAGTTTGTAGGTTTCTTCCCAGACTTTATCTGGGCT...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAGTCATGTTGGACTGTTaGACTTTGAGATTGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLVMLDC*TLRLSP Trigger: AGGAGACAATCTCAAAGTCCAACAGTCCAACATGAC...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACGTCATGTTGGACTGTTaGACTTTGAGATTGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNVMLDC*TLRLSP Trigger: AGGAGACAATCTCAAAGTCCAACAGTCCAACATGAC...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCAGATTTACTGTCAGCTaGTTTTTCCAATTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGRFTVS*FFQFST Trigger: GGTGGAAAATTGGAAAAATCAGCTGACAGTAAATCT...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACGGAACAGAATTTTTCTaGTTCAACCTGGAAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNGTEFF*FNLEIP Trigger: CGGAATTTCCAGGTTGAATCAGAAAAATTCTGTTCC...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTATTTTCTGATTCAACCTaGAAATTCCGTTCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLFSDST*KFRSSW Trigger: CCAACTGGAACGGAATTTCCAGGTTGAATCAGAAAA...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACTTTTCTGATTCAACCTaGAAATTCCGTTCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNFSDST*KFRSSW Trigger: CCAACTGGAACGGAATTTCCAGGTTGAATCAGAAAA...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAAGATTTACTGTCAGCTaGTTTTTCCAATTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLRFTVS*FFQFST Trigger: GGTGGAAAATTGGAAAAATCAGCTGACAGTAAATCT...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR TCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACAGATTTACTGTCAGCTaGTTTTTCCAATTTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNRFTVS*FFQFST Trigger: GGTGGAAAATTGGAAAAATCAGCTGACAGTAAATCT...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTGGAACATTTTCAATTTaGAGCAATAAACGTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ELDSEEAVSDNLAINGSSGTFSI*SNKRLS Trigger: CGACAAACGTTTATTGCTCCAAATTGAAAATGTTCC...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCTTCCAGTTGGTTTTCTaGAACATTTTCAATTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGFQLVF*NIFNLE Trigger: CTCCAAATTGAAAATGTTCCAGAAAACCAACTGGAA...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCAAATTCCGTTCCAGTTaGTTTTCTGGAACATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLSVVYNWDTYANVSSFGKFRSS*FSGTFS Trigger: TGAAAATGTTCCAGAAAACCAACTGGAACGGAATTT...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACGGAACATTTTCAATTTaGAGCAATAAACGTTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNGTFSI*SNKRLS Trigger: CGACAAACGTTTATTGCTCCAAATTGAAAATGTTCC...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTATTCCAGTTGGTTTTCTaGAACATTTTCAATTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLFQLVF*NIFNLE Trigger: CTCCAAATTGAAAATGTTCCAGAAAACCAACTGGAA...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CCA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACAAATTCCGTTCCAGTTaGTTTTCTGGAACATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLWTPDPYILQSLVCIFNKFRSS*FSGTFS Trigger: TGAAAATGTTCCAGAAAACCAACTGGAACGGAATTT...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS TCA 90 bp | AGGAACAGAGAAAGCTCCACAGGAGATGCTCTTCCTCAGGGACTCTaGAAGCCTCTCCAGTTCAGCCTGGCAGTGACGAATAGATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RNRESSTGDALPQGL*KPLQFSLAVTNRCC Trigger: GCAGCATCTATTCGTCACTGCCAGGCTGAACTGGAGAGGCTTTCAGAGTCCCTGAGGAAGAGCATCTCCTGTGGAGCTTTCTCTGTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CAA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCACCCTTGGTTTCGGATaGCACTGTGGAGCCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NLSVVYNWDTYANVSSFGTLGFG*HCGAQG Trigger: TCCTTGGGCTCCACAGTGCAATCCGAAACCAAGGGT...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS-3UTR CAA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTACCCTTGGTTTCGGATaGCACTGTGGAGCCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ELDSEEAVSDNLAINGSSTLGFG*HCGAQG Trigger: TCCTTGGGCTCCACAGTGCAATCCGAAACCAAGGGT...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
||
| CDS TCA 90 bp | CATAATGAACGCATTGCCAATGGTGTCAAGGATTTGACCAAACAGTaGGGGTTTCCTTCTTGTTCTTTCCATCTCTTCTCTCAGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: HNERIANGVKDLTKQ*GFPSCSFHLFSQVT Trigger: AGTCACCTGAGAGAAGAGATGGAAAGAACAAGAAGGAAACCCTCACTGTTTGGTCAAATCCTTGACACCATTGGCAATGCGTTCATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAACCCTTGGTTTCGGATaGCACTGTGGAGCCCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLTLGFG*HCGAQG Trigger: TCCTTGGGCTCCACAGTGCAATCCGAAACCAAGGGT...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCCTCCATCACTTGCTCTaGCTCCTTCTGTCTCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: NLSVVYNWDTYANVSSFGLHHLL*LLLSLP Trigger: AGGCAGAGACAGAAGGAGCAAGAGCAAGTGATGGAG...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTCTCCATCACTTGCTCTaGCTCCTTCTGTCTCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: ELDSEEAVSDNLAINGSSLHHLL*LLLSLP Trigger: AGGCAGAGACAGAAGGAGCAAGAGCAAGTGATGGAG...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTACTCCATCACTTGCTCTaGCTCCTTCTGTCTCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLLHHLL*LLLSLP Trigger: AGGCAGAGACAGAAGGAGCAAGAGCAAGTGATGGAG...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCGGTCATGTTGGACTGTaGGACTTTGAGATTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: NLSVVYNWDTYANVSSFGGHVGL*DFEIVS Trigger: GGAGACAATCTCAAAGTCCAACAGTCCAACATGACC...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTGGTCATGTTGGACTGTaGGACTTTGAGATTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: ELDSEEAVSDNLAINGSSGHVGL*DFEIVS Trigger: GGAGACAATCTCAAAGTCCAACAGTCCAACATGACC...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCGACTGTAGGAAACTCTaGAGAACCTCTTTTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: NLSVVYNWDTYANVSSFGDCRKL*RTSFAF Trigger: GAAGGCAAAAGAGGTTCTCAAGAGTTTCCTACAGTC...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTGACTGTAGGAAACTCTaGAGAACCTCTTTTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ELDSEEAVSDNLAINGSSDCRKL*RTSFAF Trigger: GAAGGCAAAAGAGGTTCTCAAGAGTTTCCTACAGTC...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTAATAAGCAGTTCTTCTaGGACCTTCAGCTTGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: ELDSEEAVSDNLAINGSSNKQFF*DLQLVL Trigger: GAGCACAAGCTGAAGGTCCAAGAAGAACTGCTTATT...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | GAATTAGACTCCGAGGAAGCAGTATCTGACAATTTAGCTATTAATGGAAGTTCTGTGAGGGTTTCCTTCTaGTTCTTTCCATCTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: ELDSEEAVSDNLAINGSSVRVSF*FFPSLL Trigger: GAGAAGAGATGGAAAGAACAAGAAGGAAACCCTCAC...AGAACTTCCATTAATAGCTAAATTGTCAGATACTGCTTCCTCGGAGTCTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCGTGAGGGTTTCCTTCTaGTTCTTTCCATCTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: NLSVVYNWDTYANVSSFGVRVSF*FFPSLL Trigger: GAGAAGAGATGGAAAGAACAAGAAGGAAACCCTCAC...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAGACTGTAGGAAACTCTaGAGAACCTCTTTTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLDCRKL*RTSFAF Trigger: GAAGGCAAAAGAGGTTCTCAAGAGTTTCCTACAGTC...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAAATAAGCAGTTCTTCTaGGACCTTCAGCTTGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLNKQFF*DLQLVL Trigger: GAGCACAAGCTGAAGGTCCAAGAAGAACTGCTTATT...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | TATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACCTTAGTGAGGGTTTCCTTCTaGTTCTTTCCATCTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: YGRQTLIFFNHWFVSLTLVRVSF*FFPSLL Trigger: GAGAAGAGATGGAAAGAACAAGAAGGAAACCCTCAC...TAAGGTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | AATTTATCTGTAGTGTACAACTGGGATACATATGCCAATGTGTCTTCATTTGGCGAAATTCCGTTCCAGTaGGTTTTCTGGAACATTTTC | + |
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Preference number: 5 (lower is better) Translates to: NLSVVYNWDTYANVSSFGEIPFQ*VFWNIF Trigger: GAAAATGTTCCAGAAAACCAACTGGAACGGAATTTC...GCCAAATGAAGACACATTGGCATATGTATCCCAGTTGTACACTACAGATAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS-3UTR CAA 90 bp | GATTTATGGACGCCAGACCCTTATATTCTTCAATCATTGGTTTGTATCTTTAACGAAATTCCGTTCCAGTaGGTTTTCTGGAACATTTTC | + |
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Preference number: 5 (lower is better) Translates to: DLWTPDPYILQSLVCIFNEIPFQ*VFWNIF Trigger: GAAAATGTTCCAGAAAACCAACTGGAACGGAATTTC...GTTAAAGATACAAACCAATGATTGAAGAATATAAGGGTCTGGCGTCCATAAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS TCA 72 bp | GAAAGCTCCACAGGAGATGCTCTTCCTCAGGGACTCTaGAAGCCTCTCCAGTTCAGCCTGGCAGTGACGAAT | + |
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Preference number: 6 (lower is better) Translates to: ESSTGDALPQGL*KPLQFSLAVTN Trigger: ATTCGTCACTGCCAGGCTGAACTGGAGAGGCTTTCAGAGTCCCTGAGGAAGAGCATCTCCTGTGGAGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS GCA 72 bp | CCTCTCCAGTTCAGCCTGGCAGTGACGAATAGATGCTaGTTCGTTCTGTCGTATGAACTCTTCCTTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PLQFSLAVTNRC*FVLSYELFLPF Trigger: GAAAGGAAGGAAGAGTTCATACGACAGAACGAAGCAGCATCTATTCGTCACTGCCAGGCTGAACTGGAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS GCA 72 bp | AAGCCTCTCCAGTTCAGCCTGGCAGTGACGAATAGATaGTGCTTCGTTCTGTCGTATGAACTCTTCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: KPLQFSLAVTNR*CFVLSYELFLP Trigger: AGGAAGGAAGAGTTCATACGACAGAACGAAGCAGCATCTATTCGTCACTGCCAGGCTGAACTGGAGAGGCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS GCA 72 bp | TTCCTTCTCAGCCACTTCCTTCTTTGTCCGCTCAGCTaGTATGGCTCTCTCTCCATCTGTAAGAGCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: FLLSHFLLCPLS*YGSLSICKSFV Trigger: GACAAAGCTCTTACAGATGGAGAGAGAGCCATAGCAGCTGAGCGGACAAAGAAGGAAGTGGCTGAGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS CAA 72 bp | GAGTCCTCCATAATAGCCTGTGACTGTAGGAAACTCTaGAGAACCTCTTTTGCCTTCACTCCCTTCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ESSIIACDCRKL*RTSFAFTPFLS Trigger: GCTGAGGAAGGGAGTGAAGGCAAAAGAGGTTCTCAAGAGTTTCCTACAGTCACAGGCTATTATGGAGGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS CAA 90 bp | CAAACTCACTGGAGTCCTTCACTTTGTCCTCTCTGGGGCTCGATTTaGCCCGGATTAGCTGTGTTAATTCAGTCACAAAATGCAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QTHWSPSLCPLWGSI*PGLAVLIQSQNAAA Trigger: AGCAGCTGCATTTTGTGACTGAATTAACACAGCTAATCCGGGCAAAATCGAGCCCCAGAGAGGACAAAGTGAAGGACTCCAGTGAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS CAA 90 bp | TGCAAGATAGAGTCCTCCATAATAGCCTGTGACTGTAGGAAACTCTaGAGAACCTCTTTTGCCTTCACTCCCTTCCTCAGCACTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: CKIESSIIACDCRKL*RTSFAFTPFLSTCW Trigger: CCAGCAAGTGCTGAGGAAGGGAGTGAAGGCAAAAGAGGTTCTCAAGAGTTTCCTACAGTCACAGGCTATTATGGAGGACTCTATCTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS CAA 72 bp | TGGAGTCCTTCACTTTGTCCTCTCTGGGGCTCGATTTaGCCCGGATTAGCTGTGTTAATTCAGTCACAAAAT | + |
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Preference number: 6 (lower is better) Translates to: WSPSLCPLWGSI*PGLAVLIQSQN Trigger: ATTTTGTGACTGAATTAACACAGCTAATCCGGGCAAAATCGAGCCCCAGAGAGGACAAAGTGAAGGACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS CAA 72 bp | CTGATACATTCTCTGGTCATGTTGGACTGTTGGACTTaGAGATTGTCTCCTTGGATCAGCTTCAGGGCATTC | + |
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Preference number: 6 (lower is better) Translates to: LIHSLVMLDCWT*RLSPWISFRAF Trigger: GAATGCCCTGAAGCTGATCCAAGGAGACAATCTCAAAGTCCAACAGTCCAACATGACCAGAGAATGTATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS TCA 72 bp | CGCATTGCCAATGGTGTCAAGGATTTGACCAAACAGTaGGGGTTTCCTTCTTGTTCTTTCCATCTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RIANGVKDLTKQ*GFPSCSFHLFS Trigger: AGAGAAGAGATGGAAAGAACAAGAAGGAAACCCTCACTGTTTGGTCAAATCCTTGACACCATTGGCAATGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS CCA 72 bp | AAATATCTGATACATTCTCTGGTCATGTTGGACTGTTaGACTTTGAGATTGTCTCCTTGGATCAGCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: KYLIHSLVMLDC*TLRLSPWISFR Trigger: CCTGAAGCTGATCCAAGGAGACAATCTCAAAGTCCAACAGTCCAACATGACCAGAGAATGTATCAGATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS CAA 90 bp | TGCCAATGGTGTCAAGGATTTGACCAAACAGTGAGGGTTTCCTTCTaGTTCTTTCCATCTCTTCTCTCAGGTGACTTATTTCATTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: CQWCQGFDQTVRVSF*FFPSLLSGDLFHSL Trigger: TAAAGAATGAAATAAGTCACCTGAGAGAAGAGATGGAAAGAACAAGAAGGAAACCCTCACTGTTTGGTCAAATCCTTGACACCATTGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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| CDS CAA 72 bp | AAAATATCTGATACATTCTCTGGTCATGTTGGACTGTaGGACTTTGAGATTGTCTCCTTGGATCAGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: KISDTFSGHVGL*DFEIVSLDQLQ Trigger: CTGAAGCTGATCCAAGGAGACAATCTCAAAGTCCAACAGTCCAACATGACCAGAGAATGTATCAGATATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029935.14 ENSMUST00000106221.8 ENSMUST00000106222.9 |
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