Pregenerated sensors for GBP2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040264Ensembl transcript IDs: ENSMUST00000029936.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGCCTATGCATTCTGCCTGGAGGGGAATTTTCTTCTCCTCTCCAATaGAATACTCTGCTCATCCAGCAACCACAGAGCCTTCCCACATTG | + |
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Preference number: 1 (lower is better) Translates to: RLCILPGGEFSSPLQ*NTLLIQQPQSLPTL Trigger: CAATGTGGGAAGGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTCCAGGCAGAATGCATAGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR CCA 90 bp | AATGAAATACTCTGCTCATCCAGCAACCACAGAGCCTTCCCACATTaGGCACTGCCCATTGTCTACCCTGGGAACCAATGTCTGCAGATA | + |
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Preference number: 1 (lower is better) Translates to: NEILCSSSNHRAFPH*ALPIVYPGNQCLQI Trigger: TATCTGCAGACATTGGTTCCCAGGGTAGACAATGGGCAGTGCCCAATGTGGGAAGGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR TCA 90 bp | TTACTTATGAGCACACAACTAAGAATATCCAGTAGGGGATGTATGTaGTACAAAATGTCTACCCAAAGACAGCTGCCCTATCACTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: LLMSTQLRISSRGCM*YKMSTQRQLPYHCV Trigger: AACACAGTGATAGGGCAGCTGTCTTTGGGTAGACATTTTGTATCACATACATCCCCTACTGGATATTCTTAGTTGTGTGCTCATAAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR GCA 90 bp | GCTGTGTTCCATGGATATGTTCAGATTTTTATCATGTTTATAACATaGCAATCCCAGCTTAGAGCAAGCTACATCTTTGAATTACTTATG | + |
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Preference number: 1 (lower is better) Translates to: AVFHGYVQIFIMFIT*QSQLRASYIFELLM Trigger: CATAAGTAATTCAAAGATGTAGCTTGCTCTAAGCTGGGATTGGCATGTTATAAACATGATAAAAATCTGAACATATCCATGGAACACAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR-3UTR TCA 90 bp | AATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGAGCCCTTCTAACACAAACATaGACTGAGTCACCTCATAAG | + |
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Preference number: 2 (lower is better) Translates to: NFLLLSNEILCSSSNHRALLTQT*TESPHK Trigger: CTTATGAGGTGACTCAGTTCATGTTTGTGTTAGAAG...GGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR-3UTR TCA 90 bp | AATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGAGCCAGCAAGCTACATCTTTaGATTACTTATGAGCACACA | + |
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Preference number: 2 (lower is better) Translates to: NFLLLSNEILCSSSNHRASKLHL*ITYEHT Trigger: TGTGTGCTCATAAGTAATTCAAAGATGTAGCTTGCT...GGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGGAGCTGTGTTCCATaGATATGTTCAGATTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: EGNFLLLSNEILCSSSNHRSCVP*ICSDFY Trigger: ATAAAAATCTGAACATATCCATGGAACACAGCTCCT...GTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR-3UTR GCA 90 bp | GAGAGATTAGAAAGGAAACACAGTAGGCTGGAGCATGAAAGAAAACAAGAAGTTTCCAATGAAATACTCTaGTCATCCAGCAACCACAGA | + |
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Preference number: 2 (lower is better) Translates to: ERLERKHSRLEHERKQEVSNEIL*SSSNHR Trigger: TCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGA...AACTTCTTGTTTTCTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR-3UTR CCA 90 bp | AACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTCTTCAAGTCTCATTCTTTTTCCTTGATGAGTaGAAACAGGGTAGAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: NFISPFFLVKCHCLQVSFFFLDE*KQGREL Trigger: AAGCTCTCTACCCTGTTTCCACTCATCAAGGAAAAA...GAATGAGACTTGAAGACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR-3UTR GCA 90 bp | GATTATGAGCCTCAGAGGAATAGAACGAAATTTATTTTGAGTTCTCCATTCTGTTACAGAGTCCATGTTTaGAGTATCAAATATAAGACC | + |
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Preference number: 2 (lower is better) Translates to: DYEPQRNRTKFILSSPFCYRVHV*SIKYKT Trigger: GGTCTTATATTTGATACTGCAAACATGGACTCTGTA...ACAGAATGGAGAACTCAAAATAAATTTCGTTCTATTCCTCTGAGGCTCATAATC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR GCA 72 bp | CATCCAGCAACCACAGAGCCTTCCCACATTGGGCACTaGCCATTGTCTACCCTGGGAACCAATGTCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: HPATTEPSHIGH*PLSTLGTNVCR Trigger: TCTGCAGACATTGGTTCCCAGGGTAGACAATGGGCAGTGCCCAATGTGGGAAGGCTCTGTGGTTGCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR CCA 72 bp | CTCTGCTCATCCAGCAACCACAGAGCCTTCCCACATTaGGCACTGCCCATTGTCTACCCTGGGAACCAATGT | + |
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Preference number: 3 (lower is better) Translates to: LCSSSNHRAFPH*ALPIVYPGNQC Trigger: ACATTGGTTCCCAGGGTAGACAATGGGCAGTGCCCAATGTGGGAAGGCTCTGTGGTTGCTGGATGAGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR GCA 72 bp | GAGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTaGTCATCCAGCAACCACAGAGCCTTCCCACATTGG | + |
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Preference number: 3 (lower is better) Translates to: EGNFLLLSNEIL*SSSNHRAFPHW Trigger: CCAATGTGGGAAGGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR TCA 72 bp | ATTCTGCCTGGAGGGGAATTTTCTTCTCCTCTCCAATaGAATACTCTGCTCATCCAGCAACCACAGAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: ILPGGEFSSPLQ*NTLLIQQPQSL Trigger: AAGGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTCCAGGCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR GCA 72 bp | CCTAGTAAAGTGTCATTGTCTTCAAGTCTCATTCAATaGCATGCTGTGTCACAATCCAAAGCTGTCCCCGAA | + |
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Preference number: 3 (lower is better) Translates to: PSKVSLSSSLIQ*HAVSQSKAVPE Trigger: TTCGGGGACAGCTTTGGATTGTGACACAGCATGGCATTGAATGAGACTTGAAGACAATGACACTTTACTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR TCA 72 bp | AGCACACAACTAAGAATATCCAGTAGGGGATGTATGTaGTACAAAATGTCTACCCAAAGACAGCTGCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: STQLRISSRGCM*YKMSTQRQLPY Trigger: ATAGGGCAGCTGTCTTTGGGTAGACATTTTGTATCACATACATCCCCTACTGGATATTCTTAGTTGTGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| 3UTR CCA 72 bp | AAGAAAGATAAAAATGAAGGTTGGTTTCACAAGAGTTaGCACTGTGATTATGAGCCTCAGAGGAATAGAACG | + |
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Preference number: 3 (lower is better) Translates to: KKDKNEGWFHKS*HCDYEPQRNRT Trigger: CGTTCTATTCCTCTGAGGCTCATAATCACAGTGCCAACTCTTGTGAAACCAACCTTCATTTTTATCTTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | GAGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACTTGGGAAGAACTTCCTaGTACACAGGCGAGGCATAT | + |
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Preference number: 4 (lower is better) Translates to: EGNFLLLSNEILCSSSNHLGRTS*YTGEAY Trigger: ATATGCCTCGCCTGTGTATCAGGAAGTTCTTCCCAA...GTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | AATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGAGCCCAGGCCTGTCAAAGATaGAGCACTTCCTCTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: NFLLLSNEILCSSSNHRAQACQR*STSSLG Trigger: TCCCAAAGAGGAAGTGCTTCATCTTTGACAGGCCTG...GGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | GAGAGATTAGAAAGGAAACACAGTAGGCTGGAGCATGAAAGAAAACAAGAAGTTCACTGCAGATGGCACTaGCATAGGTCTGCACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ERLERKHSRLEHERKQEVHCRWH*HRSAPG Trigger: GCCTGGTGCAGACCTATGTCAGTGCCATCTGCAGTG...AACTTCTTGTTTTCTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | GAGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACACCACCACAGGATTTTaGATAGCAGACAGGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: EGNFLLLSNEILCSSSNHTTTGF*IADRMS Trigger: GGACATCCTGTCTGCTATCCAAAATCCTGTGGTGGT...GTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | GAGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACTCTGGAATCCTTGCTTaGGAAGTCTTTCCTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: EGNFLLLSNEILCSSSNHSGILA*EVFPVP Trigger: AGGAACAGGAAAGACTTCTCAAGCAAGGATTCCAGA...GTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | GTTCAGATTTTTATCATGTTTATAACATGCCAATCCCAGCTTAGAGCAAGCTACCTCTCACAGGTCCTGTaGAGATCCAGGAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VQIFIMFITCQSQLRASYLSQVL*RSRSSW Trigger: CCAGGAGCTCCTGGATCTGCACAGGACCTGTGAGAG...GTAGCTTGCTCTAAGCTGGGATTGGCATGTTATAAACATGATAAAAATCTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | AATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGAGCCCTTGATGAGGCACACTaGGCCTTTCATGTGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: NFLLLSNEILCSSSNHRALDEAH*AFHVDF Trigger: GAAATCCACATGAAAGGCCCAGTGTGCCTCATCAAG...GGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | AGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGCCCCTAATTCTTCCTaGAACTTCTGGTCTACATCC | + |
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Preference number: 4 (lower is better) Translates to: RGIFFSSPMKYSAHPATTAPNSS*NFWSTS Trigger: GGATGTAGACCAGAAGTTCCAGGAAGAATTAGGGGC...TGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | GAGAGATTAGAAAGGAAACACAGTAGGCTGGAGCATGAAAGAAAACAAGAAGTTCAAAGGCATCTCGTTTaGCTTCCAGCTGGGCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: ERLERKHSRLEHERKQEVQRHLV*LPAGPL Trigger: TAGGGGCCCAGCTGGAAGCCAAACGAGATGCCTTTG...AACTTCTTGTTTTCTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | GAGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACTCTATTTGCTGCTTCTaGGGCTTCTGCTTTTATACG | + |
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Preference number: 4 (lower is better) Translates to: EGNFLLLSNEILCSSSNHSICCF*GFCFYT Trigger: CGTATAAAAGCAGAAGCCGCAGAAGCAGCAAATAGA...GTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | GAGAGATTAGAAAGGAAACACAGTAGGCTGGAGCATGAAAGAAAACAAGAAGTTGTTCTTCGTAGTAGGTaGTGGCCTTTTGCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ERLERKHSRLEHERKQEVVLRSR*WPFALL Trigger: CAGCAGTGCAAAAGGCCATCACCTACTACGAAGAAC...AACTTCTTGTTTTCTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | GAGAGATTAGAAAGGAAACACAGTAGGCTGGAGCATGAAAGAAAACAAGAAGTTACTTCTTCTTCCAGATaGGCAAAGAGGCCCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: ERLERKHSRLEHERKQEVTSSSR*AKRPSS Trigger: ACTGGAGGGCCTCTTTGCTCATCTGGAAGAAGAAGT...AACTTCTTGTTTTCTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | GAGAGATTAGAAAGGAAACACAGTAGGCTGGAGCATGAAAGAAAACAAGAAGTTTGGTTGTCACCCTTCTaGATGTCTTTCAGGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ERLERKHSRLEHERKQEVWLSPF*MSFRPS Trigger: TGAGGGCCTGAAAGACATGCAGAAGGGTGACAACCA...AACTTCTTGTTTTCTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | AGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACATTGCATTTCTGCCAATaGTCTATTTGCTGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RGIFFSSPMKYSAHPATTLHFCQ*SICCFC Trigger: GCAGAAGCAGCAAATAGAGCATTGGCAGAAATGCAA...TGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | AGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGAAGCACTTCCTCTTTaGGAAGAACTTCCTGATACA | + |
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Preference number: 4 (lower is better) Translates to: RGIFFSSPMKYSAHPATTEALPL*EELPDT Trigger: TGTATCAGGAAGTTCTTCCCAAAGAGGAAGTGCTTC...TGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | AACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTCTTCAAGTCTCATTCCGTTTGGCTTCCAGCTaGGCCCCTAATTCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NFISPFFLVKCHCLQVSFRLASS*APNSSW Trigger: CCAGGAAGAATTAGGGGCCCAGCTGGAAGCCAAACG...GAATGAGACTTGAAGACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | AGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACATGCAAGCTCTCATTCTaGAATCCTTGCTTGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RGIFFSSPMKYSAHPATTCKLSF*NPCLRS Trigger: ACTTCTCAAGCAAGGATTCCAGAATGAGAGCTTGCA...TGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | AATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGAGCCCTTCTTTTGCATTTCTaGCAATGCTCTATTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NFLLLSNEILCSSSNHRALLLHF*QCSICC Trigger: GCAGCAAATAGAGCATTGGCAGAAATGCAAAAGAAG...GGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | AATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGAGCCTCATTCTGGAATCCTTaGTTGAGAAGTCTTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: NFLLLSNEILCSSSNHRASFWNP*LRSLSC Trigger: ACAGGAAAGACTTCTCAAGCAAGGATTCCAGAATGA...GGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | GAGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACCAGCCAAATCCTCCTTaGATTCAAAGTATTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: EGNFLLLSNEILCSSSNHQPNPP*IQSIFS Trigger: TGAGAAAATACTTTGAATCCAAGGAGGATTTGGCTG...GTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | AAACTCCACTTTGTGAACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTAGACAGGATGTCCAGTaGTTCCTGGTAGACCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: KLHFVNFISPFFLVKCHCRQDVQ*FLVDLQ Trigger: TTGGAGGTCTACCAGGAAGCACTGGACATCCTGTCT...ACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTTCACAAAGTGGAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | AAACTCCACTTTGTGAACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTAGGGAGAAGCCCTTCTaGTTTCCAGCCAGCTTATTC | + |
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Preference number: 4 (lower is better) Translates to: KLHFVNFISPFFLVKCHCREKPF*FPASLF Trigger: GAATAAGCTGGCTGGAAAGCAGAAGGGCTTCTCCCT...ACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTTCACAAAGTGGAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | AAACTCCACTTTGTGAACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTAACCAGGGTATGTTCTaGCTTCTCGGGATGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: KLHFVNFISPFFLVKCHCNQGMF*LLGMRH Trigger: ATGCCTCATCCCGAGAAGCCAGAACATACCCTGGTT...ACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTTCACAAAGTGGAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | GATTATGAGCCTCAGAGGAATAGAACGAAATTTATTTTGAGTTCTCCATTCTGTGCCCACAAAGTTAGCTaGGTTGTCTACATCACTCTG | + |
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Preference number: 4 (lower is better) Translates to: DYEPQRNRTKFILSSPFCAHKVS*VVYITL Trigger: CAGAGTGATGTAGACAACTCAGCTAACTTTGTGGGC...ACAGAATGGAGAACTCAAAATAAATTTCGTTCTATTCCTCTGAGGCTCATAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | GAGAGATTAGAAAGGAAACACAGTAGGCTGGAGCATGAAAGAAAACAAGAAGTTGTGGAGGCATGTTCTTaGTTTTCTCTATCTCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: ERLERKHSRLEHERKQEVVEACS*FSLSLD Trigger: GTCAAGAGATAGAGAAAATCAAGAACATGCCTCCAC...AACTTCTTGTTTTCTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | AACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTCTTCAAGTCTCATTCTCTAGTTTGGAAAGTTaGTTCCTGTCTCCAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: NFISPFFLVKCHCLQVSFSSLES*FLSPGL Trigger: CAGGCCTGGAGACAGGAAGCAACTTTCCAAACTAGA...GAATGAGACTTGAAGACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | GAGAGATTAGAAAGGAAACACAGTAGGCTGGAGCATGAAAGAAAACAAGAAGTTTCCATCAGCATCTCATaGTTCTTTTGCATTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ERLERKHSRLEHERKQEVSISIS*FFCISA Trigger: GGCAGAAATGCAAAAGAAGCATGAGATGCTGATGGA...AACTTCTTGTTTTCTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | AAACTCCACTTTGTGAACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTAACTCTTTCCGTTCCTaGTCCATCTTCTCAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: KLHFVNFISPFFLVKCHCNSFRS*SIFSVS Trigger: GCTGACTGAGAAGATGGAGCAGGAACGGAAAGAGTT...ACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTTCACAAAGTGGAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | AAACTCCACTTTGTGAACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTAGTAAGTCTGAGCAATaGGCAGATGACATGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: KLHFVNFISPFFLVKCHCSKSEQ*ADDMSM Trigger: CATGGACATGTCATCTGCTCATTGCTCAGACTTACT...ACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTTCACAAAGTGGAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | GTTCAGATTTTTATCATGTTTATAACATGCCAATCCCAGCTTAGAGCAAGCTACTGCTTCTGCGGCTTCTaGTTTTATACGTTCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: VQIFIMFITCQSQLRASYCFCGF*FYTFHF Trigger: GAAATGGAACGTATAAAAGCAGAAGCCGCAGAAGCA...GTAGCTTGCTCTAAGCTGGGATTGGCATGTTATAAACATGATAAAAATCTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | GAGAGATTAGAAAGGAAACACAGTAGGCTGGAGCATGAAAGAAAACAAGAAGTTAATTCTTTATTCAGCTaGTCCTCCTGTATCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: ERLERKHSRLEHERKQEVNSLFS*SSCIHS Trigger: AGAGTGGATACAGGAGGACCAGCTGAATAAAGAATT...AACTTCTTGTTTTCTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | GTTCAGATTTTTATCATGTTTATAACATGCCAATCCCAGCTTAGAGCAAGCTACAAGGTAGTAGCCTCCTaGTTTATAAAATGTCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VQIFIMFITCQSQLRASYKVVAS*FIKCPL Trigger: CAGGGGACATTTTATAAACCAGGAGGCTACTACCTT...GTAGCTTGCTCTAAGCTGGGATTGGCATGTTATAAACATGATAAAAATCTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | AACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTCTTCAAGTCTCATTCCCCTTTCCAGGAGTCTaGATATACTTTTTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: NFISPFFLVKCHCLQVSFPFPGV*IYFFSS Trigger: GCTGGAGAAAAAGTATATCCAGACTCCTGGAAAGGG...GAATGAGACTTGAAGACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | GTTCAGATTTTTATCATGTTTATAACATGCCAATCCCAGCTTAGAGCAAGCTACTTGTCTACATCACTCTaGTCAGGTGATGACTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: VQIFIMFITCQSQLRASYLSTSL*SGDDFD Trigger: ATCAAAGTCATCACCTGATCAGAGTGATGTAGACAA...GTAGCTTGCTCTAAGCTGGGATTGGCATGTTATAAACATGATAAAAATCTGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR GCA 90 bp | GAGAGATTAGAAAGGAAACACAGTAGGCTGGAGCATGAAAGAAAACAAGAAGTTATCTCATGCTTCTTTTaGATTTCTGCCAATGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: ERLERKHSRLEHERKQEVISCFF*ISANAL Trigger: TAGAGCATTGGCAGAAATGCAAAAGAAGCATGAGAT...AACTTCTTGTTTTCTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CCA 90 bp | AAACTCCACTTTGTGAACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTGTATCCACTCTAGTTTaGAAAGTTGCTTCCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KLHFVNFISPFFLVKCHCVSTLV*KVASCL Trigger: GAGACAGGAAGCAACTTTCCAAACTAGAGTGGATAC...ACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTTCACAAAGTGGAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | GTTCAGATTTTTATCATGTTTATAACATGCCAATCCCAGCTTAGAGCAAGCTACAGTCTTTCCTGTTCCTaGAGTTTAAGGGATATGATT | + |
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Preference number: 4 (lower is better) Translates to: VQIFIMFITCQSQLRASYSLSCS*SLRDMI Trigger: AATCATATCCCTTAAACTTCAGGAACAGGAAAGACT...GTAGCTTGCTCTAAGCTGGGATTGGCATGTTATAAACATGATAAAAATCTGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR TCA 90 bp | AAACTCCACTTTGTGAACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTATTTTCTCTATCTCTTaGCGTAGTTGCAAGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: KLHFVNFISPFFLVKCHCIFSIS*RSCKLS Trigger: TGAGAGCTTGCAACTACGTCAAGAGATAGAGAAAAT...ACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTTCACAAAGTGGAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS GCA 90 bp | TGCTACGACCACCACAGGATTTTGGATAGCAGACAGGATGTCCAGTaGTTCCTGGTAGACCTCCAACTGCTCACCGGAGTTCTTGATGAG | + |
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Preference number: 5 (lower is better) Translates to: CYDHHRILDSRQDVQ*FLVDLQLLTGVLDE Trigger: CTCATCAAGAACTCCGGTGAGCAGTTGGAGGTCTACCAGGAAGCACTGGACATCCTGTCTGCTATCCAAAATCCTGTGGTGGTCGTAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS GCA 90 bp | TCTTTATTCAGCTGGTCCTCCTGTATCCACTCTAGTTTGGAAAGTTaGTTCCTGTCTCCAGGCCTGTCAAAGATGAAGCACTTCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SLFSWSSCIHSSLES*FLSPGLSKMKHFLF Trigger: AAAGAGGAAGTGCTTCATCTTTGACAGGCCTGGAGACAGGAAGCAACTTTCCAAACTAGAGTGGATACAGGAGGACCAGCTGAATAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS TCA 90 bp | GTGCATGATCGAGGTGGAGGCATGTTCTTGATTTTCTCTATCTCTTaGCGTAGTTGCAAGCTCTCATTCTGGAATCCTTGCTTGAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: VHDRGGGMFLIFSIS*RSCKLSFWNPCLRS Trigger: ACTTCTCAAGCAAGGATTCCAGAATGAGAGCTTGCAACTACGTCAAGAGATAGAGAAAATCAAGAACATGCCTCCACCTCGATCATGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | GATTATGAGCCTCAGAGGAATAGAACGAAATTTATTTTGAGTTCTCCATTCTGTTGCTCACCGGAGTTCTaGATGAGGCACACTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: DYEPQRNRTKFILSSPFCCSPEF*MRHTGP Trigger: AGGCCCAGTGTGCCTCATCAAGAACTCCGGTGAGCA...ACAGAATGGAGAACTCAAAATAAATTTCGTTCTATTCCTCTGAGGCTCATAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | AATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGAGCCCTCATTCTGGAATCCTaGCTTGAGAAGTCTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: NFLLLSNEILCSSSNHRALILES*LEKSFL Trigger: CAGGAAAGACTTCTCAAGCAAGGATTCCAGAATGAG...GGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | GAGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACTCAGCCAAATCCTCCTaGGATTCAAAGTATTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: EGNFLLLSNEILCSSSNHSAKSS*DSKYFL Trigger: GAGAAAATACTTTGAATCCAAGGAGGATTTGGCTGA...GTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | AATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGAGCCCTGTTTCATGTGCTCTaGATAACTCTGTTCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: NFLLLSNEILCSSSNHRALFHVL*ITLFLL Trigger: CAGAAGGAACAGAGTTATCAAGAGCACATGAAACAG...GGCTCTGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | AGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACAGGTGATGACTTTGATTaGATGAGATCAGTCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RGIFFSSPMKYSAHPATTGDDFD*MRSVSS Trigger: AGAACTGACTGATCTCATCAAATCAAAGTCATCACC...TGTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | GAGGGGAATTTTCTTCTCCTCTCCAATGAAATACTCTGCTCATCCAGCAACCACCTTTTTCTCCAGCTCTaGTTTCCTTTGAAGAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: EGNFLLLSNEILCSSSNHLFLQL*FPLKKK Trigger: CTTTTTCTTCAAAGGAAACAAGAGCTGGAGAAAAAG...GTGGTTGCTGGATGAGCAGAGTATTTCATTGGAGAGGAGAAGAAAATTCCCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | GATTATGAGCCTCAGAGGAATAGAACGAAATTTATTTTGAGTTCTCCATTCTGTGACCACCACAGGATTTaGGATAGCAGACAGGATGTC | + |
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Preference number: 5 (lower is better) Translates to: DYEPQRNRTKFILSSPFCDHHRI*DSRQDV Trigger: GACATCCTGTCTGCTATCCAAAATCCTGTGGTGGTC...ACAGAATGGAGAACTCAAAATAAATTTCGTTCTATTCCTCTGAGGCTCATAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | GATTATGAGCCTCAGAGGAATAGAACGAAATTTATTTTGAGTTCTCCATTCTGTTTTAGACGTGGCCCATaGACTGTGATGCCTCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: DYEPQRNRTKFILSSPFCFRRGP*TVMPPD Trigger: ATCTGGAGGCATCACAGTCAATGGGCCACGTCTAAA...ACAGAATGGAGAACTCAAAATAAATTTCGTTCTATTCCTCTGAGGCTCATAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS TCA 90 bp | AAGCTCTCATTCTGGAATCCTTGCTTGAGAAGTCTTTCCTGTTCCTaGAGTTTAAGGGATATGATTCTTTGTTGCTCTGCCATTAACTCT | + |
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Preference number: 5 (lower is better) Translates to: KLSFWNPCLRSLSCS*SLRDMILCCSAINS Trigger: AGAGTTAATGGCAGAGCAACAAAGAATCATATCCCTTAAACTTCAGGAACAGGAAAGACTTCTCAAGCAAGGATTCCAGAATGAGAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | GTTCAGATTTTTATCATGTTTATAACATGCCAATCCCAGCTTAGAGCAAGCTACTGTATCCACTCTAGTTaGGAAAGTTGCTTCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: VQIFIMFITCQSQLRASYCIHSS*ESCFLS Trigger: AGACAGGAAGCAACTTTCCAAACTAGAGTGGATACA...GTAGCTTGCTCTAAGCTGGGATTGGCATGTTATAAACATGATAAAAATCTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | GTTCAGATTTTTATCATGTTTATAACATGCCAATCCCAGCTTAGAGCAAGCTACCAGCTCTTGTTTCCTTaGAAGAAAAAGGTAGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: VQIFIMFITCQSQLRASYQLLFP*KKKVVA Trigger: GGCTACTACCTTTTTCTTCAAAGGAAACAAGAGCTG...GTAGCTTGCTCTAAGCTGGGATTGGCATGTTATAAACATGATAAAAATCTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS-3UTR CAA 90 bp | AACTTTATTTCTCCCTTCTTCCTAGTAAAGTGTCATTGTCTTCAAGTCTCATTCCATCTCATGCTTCTTTaGCATTTCTGCCAATGCTCT | + |
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Preference number: 5 (lower is better) Translates to: NFISPFFLVKCHCLQVSFHLMLL*HFCQCS Trigger: AGAGCATTGGCAGAAATGCAAAAGAAGCATGAGATG...GAATGAGACTTGAAGACAATGACACTTTACTAGGAAGAAGGGAGAAATAAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS TCA 72 bp | TCTCCATACAGGGTAGTTCTCCACTGCAGATGGCACTaGCATAGGTCTGCACCAGGCTTTTTAGACGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPYRVVLHCRWH*HRSAPGFLDVA Trigger: GGCCACGTCTAAAAAGCCTGGTGCAGACCTATGTCAGTGCCATCTGCAGTGGAGAACTACCCTGTATGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS GCA 72 bp | CACCACAGGATTTTGGATAGCAGACAGGATGTCCAGTaGTTCCTGGTAGACCTCCAACTGCTCACCGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: HHRILDSRQDVQ*FLVDLQLLTGV Trigger: AACTCCGGTGAGCAGTTGGAGGTCTACCAGGAAGCACTGGACATCCTGTCTGCTATCCAAAATCCTGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS GCA 72 bp | AGCTGGTCCTCCTGTATCCACTCTAGTTTGGAAAGTTaGTTCCTGTCTCCAGGCCTGTCAAAGATGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: SWSSCIHSSLES*FLSPGLSKMKH Trigger: GTGCTTCATCTTTGACAGGCCTGGAGACAGGAAGCAACTTTCCAAACTAGAGTGGATACAGGAGGACCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS CCA 72 bp | CTTTATTCAGCTGGTCCTCCTGTATCCACTCTAGTTTaGAAAGTTGCTTCCTGTCTCCAGGCCTGTCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LYSAGPPVSTLV*KVASCLQACQR Trigger: TCTTTGACAGGCCTGGAGACAGGAAGCAACTTTCCAAACTAGAGTGGATACAGGAGGACCAGCTGAATAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS CCA 72 bp | TTCTTCTTAACAAAGGCATCTCGTTTGGCTTCCAGCTaGGCCCCTAATTCTTCCTGGAACTTCTGGTCTACA | + |
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Preference number: 6 (lower is better) Translates to: FFLTKASRLASS*APNSSWNFWST Trigger: TGTAGACCAGAAGTTCCAGGAAGAATTAGGGGCCCAGCTGGAAGCCAAACGAGATGCCTTTGTTAAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS CAA 90 bp | TCTACAAATTCTTTATTCAGCTGGTCCTCCTGTATCCACTCTAGTTaGGAAAGTTGCTTCCTGTCTCCAGGCCTGTCAAAGATGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: STNSLFSWSSCIHSS*ESCFLSPGLSKMKH Trigger: GTGCTTCATCTTTGACAGGCCTGGAGACAGGAAGCAACTTTCCAAACTAGAGTGGATACAGGAGGACCAGCTGAATAAAGAATTTGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS TCA 72 bp | TTTAGTGTTCTCATCAGTTCCTTTTCTCAGAGCCAGTaGAGTCTCCAGGTACTCATCAGGAGTGATGGATTC | + |
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Preference number: 6 (lower is better) Translates to: FSVLISSFSQSQ*SLQVLIRSDGF Trigger: GAATCCATCACTCCTGATGAGTACCTGGAGACTTCACTGGCTCTGAGAAAAGGAACTGATGAGAACACTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS TCA 72 bp | AAAGTATGGTGCATGATCGAGGTGGAGGCATGTTCTTaGTTTTCTCTATCTCTTGACGTAGTTGCAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: KVWCMIEVEACS*FSLSLDVVASS Trigger: AGAGCTTGCAACTACGTCAAGAGATAGAGAAAATCAAGAACATGCCTCCACCTCGATCATGCACCATACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS TCA 72 bp | AAGCCCACAAAGTTAGCTGAGTTGTCTACATCACTCTaGTCAGGTGATGACTTTGATTTGATGAGATCAGTC | + |
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Preference number: 6 (lower is better) Translates to: KPTKLAELSTSL*SGDDFDLMRSV Trigger: GACTGATCTCATCAAATCAAAGTCATCACCTGATCAGAGTGATGTAGACAACTCAGCTAACTTTGTGGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS TCA 72 bp | TTCTGGAATCCTTGCTTGAGAAGTCTTTCCTGTTCCTaGAGTTTAAGGGATATGATTCTTTGTTGCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: FWNPCLRSLSCS*SLRDMILCCSA Trigger: GGCAGAGCAACAAAGAATCATATCCCTTAAACTTCAGGAACAGGAAAGACTTCTCAAGCAAGGATTCCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS GCA 72 bp | CTTTTGCATTTCTGCCAATGCTCTATTTGCTGCTTCTaGGGCTTCTGCTTTTATACGTTCCATTTCAATCTG | + |
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Preference number: 6 (lower is better) Translates to: LLHFCQCSICCF*GFCFYTFHFNL Trigger: CAGATTGAAATGGAACGTATAAAAGCAGAAGCCGCAGAAGCAGCAAATAGAGCATTGGCAGAAATGCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS GCA 72 bp | ATGCTTCTTTTGCATTTCTGCCAATGCTCTATTTGCTaGTTCTGCGGCTTCTGCTTTTATACGTTCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: MLLLHFCQCSIC*FCGFCFYTFHF Trigger: GAAATGGAACGTATAAAAGCAGAAGCCGCAGAAGCAGCAAATAGAGCATTGGCAGAAATGCAAAAGAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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| CDS CCA 72 bp | TTGGATTCAAAGTATTTTCTCAGCATCACTTCAGCCTaGAGTCCCTTTCCAGGAGTCTGGATATACTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LDSKYFLSITSA*SPFPGVWIYFF Trigger: GAAAAAGTATATCCAGACTCCTGGAAAGGGACTCCAGGCTGAAGTGATGCTGAGAAAATACTTTGAATCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029936.5 |
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