Pregenerated sensors for GBP10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000105096Ensembl transcript IDs: ENSMUST00000065588.7
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTGTTTTCATCTTTCTCTGTTTCTTCAGTCCACAGGAACAGTGCTaGCTACCCGTAGGATGTGTTTCCTACAATATTAACCTGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: FVFIFLCFFSPQEQC*LPVGCVSYNINLRQ Trigger: CTGTCTCAGGTTAATATTGTAGGAAACACATCCTACGGGTAGGCAGCACTGTTCCTGTGGACTGAAGAAACAGAGAAAGATGAAAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR CCA 90 bp | ACTTTCCCAGCACTCTTCATGAAATGTGTAAGACTGAGAACGTCATaGAATGCACACATCCCTTCAACTTTTGGCTCCAACTTAATCTCT | + |
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Preference number: 1 (lower is better) Translates to: TFPALFMKCVRLRTS*NAHIPSTFGSNLIS Trigger: AGAGATTAAGTTGGAGCCAAAAGTTGAAGGGATGTGTGCATTCCATGACGTTCTCAGTCTTACACATTTCATGAAGAGTGCTGGGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR CCA 90 bp | CTAATCTTCCAGAGGGCATTTCATTTGTGTTCTTGTATGTTTGCATaGGATAGTAGCATTTCTAATAATAATCACACAGTTGTATGGTGT | + |
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Preference number: 1 (lower is better) Translates to: LIFQRAFHLCSCMFA*DSSISNNNHTVVWC Trigger: ACACCATACAACTGTGTGATTATTATTAGAAATGCTACTATCCCATGCAAACATACAAGAACACAAATGAAATGCCCTCTGGAAGATTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR CAA 90 bp | TGTGTCAAGGCTGGAGAATGCATTCTGAGAGAAGTTGAGCCTGGCTaGTTGTATAGCATCCACAGTCAGGAAGCCACAAGTGGTAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: CVKAGECILREVEPG*LYSIHSQEATSGRV Trigger: GACCCTACCACTTGTGGCTTCCTGACTGTGGATGCTATACAACAAGCCAGGCTCAACTTCTCTCAGAATGCATTCTCCAGCCTTGACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR CAA 90 bp | GTCAAGGCTGGAGAATGCATTCTGAGAGAAGTTGAGCCTGGCTTGTaGTATAGCATCCACAGTCAGGAAGCCACAAGTGGTAGGGTCATT | + |
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Preference number: 2 (lower is better) Translates to: VKAGECILREVEPGL*YSIHSQEATSGRVI Trigger: AATGACCCTACCACTTGTGGCTTCCTGACTGTGGATGCTATACAACAAGCCAGGCTCAACTTCTCTCAGAATGCATTCTCCAGCCTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAGAAGTTGAGCCTGGCTTGTTGTATAGCATCCACAGTCAGGAAGCCACAACCTTGTCTCCTTGCTaGTTCTCTATGCAGTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LREVEPGLLYSIHSQEATTLSPC*FSMQSN Trigger: ATTTGACTGCATAGAGAATCAGCAAGGAGACAAGGT...TGTGGCTTCCTGACTGTGGATGCTATACAACAAGCCAGGCTCAACTTCTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTGGAGTTAGATTTACAGGTAGTTGTTACCTGCCCCAGGAACTGAGCTACTCTCCACCTCCCATGTaGCCCATGTATTCTCTTATA | + |
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Preference number: 2 (lower is better) Translates to: SLGVRFTGSCYLPQELSYSPPPM*PMYSLI Trigger: TATAAGAGAATACATGGGGCACATGGGAGGTGGAGA...GTAGCTCAGTTCCTGGGGCAGGTAACAACTACCTGTAAATCTAACTCCAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR CAA 90 bp | CCTGGGCTACATGGTCCTCATAGGAGTACAGAAAACCTTGTCTCCTaGCTGATTCTCTATGCAGTCAAATTGGCCAACAGTAATCACATG | + |
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Preference number: 2 (lower is better) Translates to: PGLHGPHRSTENLVS*LILYAVKLANSNHM Trigger: CATGTGATTACTGTTGGCCAATTTGACTGCATAGAGAATCAGCAAGGAGACAAGGTTTTCTGTACTCCTATGAGGACCATGTAGCCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR-3UTR TCA 90 bp | GCACTCTTCATGAAATGTGTAAGACTGAGAACGTCATGGAATGCACACATCCCTTTCCTCTTGCTGAGATaGAATACCCTCACAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: ALFMKCVRLRTSWNAHIPFLLLR*NTLTKP Trigger: TGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAA...AGGGATGTGTGCATTCCATGACGTTCTCAGTCTTACACATTTCATGAAGAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR-3UTR TCA 90 bp | ATGACTTTTCCTCTTGCTGAGATGAAATACCCTCACAAAACCAACTTAAGAAAGCTGGAGAATGCATTCTaGGAGAAGTTGAGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: MTFPLAEMKYPHKTNLRKLENAF*EKLSLA Trigger: AGCCAGGCTCAACTTCTCTCAGAATGCATTCTCCAG...CTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCTTAAAGGAAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCGACTTTTCCTCTTGCTaGGATGAAATACCCTCACAA | + |
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Preference number: 2 (lower is better) Translates to: KALKENIIKLQMLCFLVLDFSSC*DEIPSQ Trigger: TTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTC...GAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTTCCTTTAAGGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR-3UTR GCA 90 bp | AGTATGTATATGTGTAAGCTGAGGATATGTGATGGAAGTAACAGTGACCCTTGGAAAACATCATTAAGCTaGAAATGTTATGCTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SMYMCKLRICDGSNSDPWKTSLS*KCYASW Trigger: CCAGGAAGCATAACATTTGCAGCTTAATGATGTTTT...CCAAGGGTCACTGTTACTTCCATCACATATCCTCAGCTTACACATATACATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR CAA 90 bp | TCTATGCAGTCAAATTGGCCAACAGTAATCACATGTAATTACTACTaGCATAGCTTCCATAGGGCTCATTTCAAAAATGTGTCCTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: SMQSNWPTVITCNYY*HSFHRAHFKNVSSK Trigger: TTTAGAGGACACATTTTTGAAATGAGCCCTATGGAAGCTATGCAAGTAGTAATTACATGTGATTACTGTTGGCCAATTTGACTGCATAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR-3UTR TCA 90 bp | ATGACTTTTCCTCTTGCTGAGATGAAATACCCTCACAAAACCAACTTAAGAAAGGTTTGTTGGGGTCTATaGATCATGATGATACATTGT | + |
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Preference number: 2 (lower is better) Translates to: MTFPLAEMKYPHKTNLRKVCWGL*IMMIHC Trigger: ACAATGTATCATCATGATTCATAGACCCCAACAAAC...CTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR CCA 72 bp | GCACTCTTCATGAAATGTGTAAGACTGAGAACGTCATaGAATGCACACATCCCTTCAACTTTTGGCTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: ALFMKCVRLRTS*NAHIPSTFGSN Trigger: GTTGGAGCCAAAAGTTGAAGGGATGTGTGCATTCCATGACGTTCTCAGTCTTACACATTTCATGAAGAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR GCA 72 bp | TTCATCTTTCTCTGTTTCTTCAGTCCACAGGAACAGTaGTGCCTACCCGTAGGATGTGTTTCCTACAATATT | + |
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Preference number: 3 (lower is better) Translates to: FIFLCFFSPQEQ*CLPVGCVSYNI Trigger: AATATTGTAGGAAACACATCCTACGGGTAGGCAGCACTGTTCCTGTGGACTGAAGAAACAGAGAAAGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR-3UTR CAA 90 bp | GGTTTGTTGGGGTCTATGAATCATGATGATACATTGTGTCAAGGCTGGAGAATGACATGTAATTACTACTaGCATAGCTTCCATAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: GLLGSMNHDDTLCQGWRMTCNYY*HSFHRA Trigger: AGCCCTATGGAAGCTATGCAAGTAGTAATTACATGT...CATTCTCCAGCCTTGACACAATGTATCATCATGATTCATAGACCCCAACAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR GCA 72 bp | CTTCATGAAATGTGTAAGACTGAGAACGTCATGGAATaGACACATCCCTTCAACTTTTGGCTCCAACTTAAT | + |
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Preference number: 3 (lower is better) Translates to: LHEMCKTENVME*THPFNFWLQLN Trigger: ATTAAGTTGGAGCCAAAAGTTGAAGGGATGTGTGCATTCCATGACGTTCTCAGTCTTACACATTTCATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR GCA 72 bp | GCCTTAAAGGAAAACATCATTAAGCTGCAAATGTTATaGTTCCTGGTACTCAAGTCTTGTTCTTGGGTGACT | + |
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Preference number: 3 (lower is better) Translates to: ALKENIIKLQML*FLVLKSCSWVT Trigger: AGTCACCCAAGAACAAGACTTGAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTTCCTTTAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR TCA 90 bp | TCCCTTGGAGTTAGATTTACAGGTAGTTGTTACCTGCCCCAGGAACTGAGCTACCTCGATGAAGGCCTGTaGCTGCAGAAAGCTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SLGVRFTGSCYLPQELSYLDEGL*LQKALE Trigger: TTCCAGAGCTTTCTGCAGTCACAGGCCTTCATCGAG...GTAGCTCAGTTCCTGGGGCAGGTAACAACTACCTGTAAATCTAACTCCAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR GCA 90 bp | TCCCTTGGAGTTAGATTTACAGGTAGTTGTTACCTGCCCCAGGAACTGAGCTACCTGGAAGACTTCACTTaGCTTCACCCCTTTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLGVRFTGSCYLPQELSYLEDFT*LHPFPG Trigger: CCCAGGAAAGGGGTGAAGGCAAGTGAAGTCTTCCAG...GTAGCTCAGTTCCTGGGGCAGGTAACAACTACCTGTAAATCTAACTCCAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR GCA 90 bp | AGGTCCCTTGGAGTTAGATTTACAGGTAGTTGTTACCTGCCCCAGGAACTGAGCAGCTGCTCTCTCTCCTaGATCAGCTTTCTCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLGVRFTGSCYLPQELSSCSLS*ISFLLS Trigger: ACTGAGGAGAAAGCTGATGCAGGAGAGAGAGCAGCT...GCTCAGTTCCTGGGGCAGGTAACAACTACCTGTAAATCTAACTCCAAGGGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR GCA 90 bp | TCCCTTGGAGTTAGATTTACAGGTAGTTGTTACCTGCCCCAGGAACTGAGCTACATGAAGGCCTGTGACTaGAGAAAGCTCTGGAAGACT | + |
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Preference number: 4 (lower is better) Translates to: SLGVRFTGSCYLPQELSYMKACD*RKLWKT Trigger: AGTCTTCCAGAGCTTTCTGCAGTCACAGGCCTTCAT...GTAGCTCAGTTCCTGGGGCAGGTAACAACTACCTGTAAATCTAACTCCAAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR GCA 90 bp | AAAGCCTTAAAGGAAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCATCCTGCTCCTTCTCTaGCGCCACCTTCTGGGCACG | + |
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Preference number: 4 (lower is better) Translates to: KALKENIIKLQMLCFLVLILLLL*RHLLGT Trigger: CGTGCCCAGAAGGTGGCGGCAGAGAAGGAGCAGGAT...GAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTTCCTTTAAGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR TCA 90 bp | CTGAGAGAAGTTGAGCCTGGCTTGTTGTATAGCATCCACAGTCAGGAAGCCACATTCCATAAAATCCTTTaGAAGTCGATCCAGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LREVEPGLLYSIHSQEATFHKIL*KSIQFF Trigger: GAAGAACTGGATCGACTTTCAAAGGATTTTATGGAA...TGTGGCTTCCTGACTGTGGATGCTATACAACAAGCCAGGCTCAACTTCTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR GCA 90 bp | GATGAAGCCAGTAGACCAGGCTTTTTACTAATCTTCCAGAGGGCATTTCATTTGATTTGGGGAAGACTTTaGTCTGATCAGCTCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: DEASRPGFLLIFQRAFHLIWGRL*SDQLCE Trigger: CTCACAGAGCTGATCAGAGCAAAGTCTTCCCCAAAT...CAAATGAAATGCCCTCTGGAAGATTAGTAAAAAGCCTGGTCTACTGGCTTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR GCA 90 bp | ACTTTCCCAGCACTCTTCATGAAATGTGTAAGACTGAGAACGTCATGGAATGCATCCATATACTCCTGCTaGTCCTTCTGCTTCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TFPALFMKCVRLRTSWNASIYSC*SFCFCL Trigger: AAGACAGAAGCAGAAGGAGCAGCAGGAGTATATGGA...TGCATTCCATGACGTTCTCAGTCTTACACATTTCATGAAGAGTGCTGGGAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR GCA 90 bp | ATAGCATCCACAGTCAGGAAGCCACAAGTGGTAGGGTCATTTGTTTTCATCTTTCATGAATTGGATGCTTaGATTCTGGGTTTGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: IASTVRKPQVVGSFVFIFHELDA*ILGLSP Trigger: AGGTGACAAACCCAGAATGCAAGCATCCAATTCATG...AAAGATGAAAACAAATGACCCTACCACTTGTGGCTTCCTGACTGTGGATGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR GCA 90 bp | AAAGCCTTAAAGGAAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCAGCGCTGTATCTGCCTaGAAGATGGAACTCTCGATG | + |
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Preference number: 4 (lower is better) Translates to: KALKENIIKLQMLCFLVLSAVSA*KMELSM Trigger: CATCGAGAGTTCCATCTTGCAGGCAGATACAGCGCT...GAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTTCCTTTAAGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR TCA 90 bp | ATGACTTTTCCTCTTGCTGAGATGAAATACCCTCACAAAACCAACTTAAGAAAGCGATCCAGTTCTTCTTaGCAGTATTTATTTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: MTFPLAEMKYPHKTNLRKRSSSS*QYLFDA Trigger: GGCATCAAATAAATACTGTCAAGAAGAACTGGATCG...CTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR GCA 90 bp | ATGACTTTTCCTCTTGCTGAGATGAAATACCCTCACAAAACCAACTTAAGAAAGATGACATCTCTCAGTTaGTGTATCTCTTTGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: MTFPLAEMKYPHKTNLRKMTSLS*CISLFI Trigger: AATGAACAAAGAGATACAGCAACTGAGAGATGTCAT...CTTTCTTAAGTTGGTTTTGTGAGGGTATTTCATCTCAGCAAGAGGAAAAGTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| 3UTR CAA 72 bp | TCAAATTGGCCAACAGTAATCACATGTAATTACTACTaGCATAGCTTCCATAGGGCTCATTTCAAAAATGTG | + |
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Preference number: 4 (lower is better) Translates to: SNWPTVITCNYY*HSFHRAHFKNV Trigger: CACATTTTTGAAATGAGCCCTATGGAAGCTATGCAAGTAGTAATTACATGTGATTACTGTTGGCCAATTTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS TCA 90 bp | TTCCCAGTACGGGACCATCCAACAATAGCCACGACTACCACTGGCTaGGAAATCTTGTCCAGAATCTCTATGGCTTCCTGGTTCACTGAC | + |
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Preference number: 5 (lower is better) Translates to: FPVRDHPTIATTTTG*EILSRISMASWFTD Trigger: GTCAGTGAACCAGGAAGCCATAGAGATTCTGGACAAGATTTCTCAGCCAGTGGTAGTCGTGGCTATTGTTGGATGGTCCCGTACTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR CAA 90 bp | AGGTCCCTTGGAGTTAGATTTACAGGTAGTTGTTACCTGCCCCAGGAACTGAGCTGGCATCCACATAGGTaGTCACCAGAATCCCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: RSLGVRFTGSCYLPQELSWHPHR*SPESLV Trigger: AACTAGGGATTCTGGTGACAACCTATGTGGATGCCA...GCTCAGTTCCTGGGGCAGGTAACAACTACCTGTAAATCTAACTCCAAGGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR CAA 90 bp | ATAGCATCCACAGTCAGGAAGCCACAAGTGGTAGGGTCATTTGTTTTCATCTTTCACGCTGGGCCAGAGTaGTCACAGCATCATCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: IASTVRKPQVVGSFVFIFHAGPE*SQHHPD Trigger: GTCTGGATGATGCTGTGACAACTCTGGCCCAGCGTG...AAAGATGAAAACAAATGACCCTACCACTTGTGGCTTCCTGACTGTGGATGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR CAA 90 bp | CTGAGAGAAGTTGAGCCTGGCTTGTTGTATAGCATCCACAGTCAGGAAGCCACAGAACTTAGGATCCAGTaGGTCTTCTGTGATAGAATC | + |
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Preference number: 5 (lower is better) Translates to: LREVEPGLLYSIHSQEATELRIQ*VFCDRI Trigger: GATTCTATCACAGAAGACCAACTGGATCCTAAGTTC...TGTGGCTTCCTGACTGTGGATGCTATACAACAAGCCAGGCTCAACTTCTCTCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR CAA 90 bp | GCACTCTTCATGAAATGTGTAAGACTGAGAACGTCATGGAATGCACACATCCCTCTTGTGACTTTTCTCTaGAGCCTCCATATACTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ALFMKCVRLRTSWNAHIPLVTFL*SLHILL Trigger: CAGGAGTATATGGAGGCTCAAGAGAAAAGTCACAAG...AGGGATGTGTGCATTCCATGACGTTCTCAGTCTTACACATTTCATGAAGAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR CAA 90 bp | AGTATGTATATGTGTAAGCTGAGGATATGTGATGGAAGTAACAGTGACCCTTGGCATTCCCTGCATGAATaGGATGCTTGCATTCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SMYMCKLRICDGSNSDPWHSLHE*DACILG Trigger: ACCCAGAATGCAAGCATCCAATTCATGCAGGGAATG...CCAAGGGTCACTGTTACTTCCATCACATATCCTCAGCTTACACATATACATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR CAA 90 bp | GATGAAGCCAGTAGACCAGGCTTTTTACTAATCTTCCAGAGGGCATTTCATTTGCAGCTTTCTCCTCAGTaGCTCTATGTTTTCCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: DEASRPGFLLIFQRAFHLQLSPQ*LYVFLV Trigger: CACAAGGAAAACATAGAGCAACTGAGGAGAAAGCTG...CAAATGAAATGCCCTCTGGAAGATTAGTAAAAAGCCTGGTCTACTGGCTTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR CAA 90 bp | GCACTCTTCATGAAATGTGTAAGACTGAGAACGTCATGGAATGCACACATCCCTAGTTGCTGTATCTCTTaGTTCATTTCCTCAGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: ALFMKCVRLRTSWNAHIPSCCIS*FISSAF Trigger: GAAAGCTGAGGAAATGAACAAAGAGATACAGCAACT...AGGGATGTGTGCATTCCATGACGTTCTCAGTCTTACACATTTCATGAAGAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR CAA 90 bp | AAAGCCTTAAAGGAAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCACTGACAGCTGTTCATaGTGGTTTTCCACAAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: KALKENIIKLQMLCFLVLTDSCS*WFSTRQ Trigger: TTGCCTTGTGGAAAACCACAATGAACAGCTGTCAGT...GAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTTCCTTTAAGGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR CAA 90 bp | AGTATGTATATGTGTAAGCTGAGGATATGTGATGGAAGTAACAGTGACCCTTGGGACAGGAAAAGCTCTTaGTTCTCTCCTATTAATTCC | + |
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Preference number: 5 (lower is better) Translates to: SMYMCKLRICDGSNSDPWDRKSS*FSPINS Trigger: GGAATTAATAGGAGAGAACAAAGAGCTTTTCCTGTC...CCAAGGGTCACTGTTACTTCCATCACATATCCTCAGCTTACACATATACATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS-3UTR CAA 90 bp | AAAGCCTTAAAGGAAAACATCATTAAGCTGCAAATGTTATGCTTCCTGGTACTCGATGACATCTCTCAGTaGCTGTATCTCTTTGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: KALKENIIKLQMLCFLVLDDISQ*LYLFVH Trigger: ATGAACAAAGAGATACAGCAACTGAGAGATGTCATC...GAGTACCAGGAAGCATAACATTTGCAGCTTAATGATGTTTTCCTTTAAGGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS CCA 72 bp | CTTAGCAGATCCTGCTCCTTCTCTGCCGCCACCTTCTaGGCACGCTCCTCTGCAATGGCCTTCTTCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSRSCSFSAATF*ARSSAMAFFPA Trigger: TGCTGGGAAGAAGGCCATTGCAGAGGAGCGTGCCCAGAAGGTGGCGGCAGAGAAGGAGCAGGATCTGCTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS TCA 72 bp | GGGCACGCTCCTCTGCAATGGCCTTCTTCCCAGCAGTaGGCGCTGTATCTGCCTGCAAGATGGAACTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: GHAPLQWPSSQQ*ALYLPARWNSR Trigger: TCGAGAGTTCCATCTTGCAGGCAGATACAGCGCTCACTGCTGGGAAGAAGGCCATTGCAGAGGAGCGTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS CCA 72 bp | AGCTCTGGAAGACTTCACTTGCCTTCACCCCTTTCCTaGGAACCTGCCAGTAGTCATGCTCAATCTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSGRLHLPSPLS*EPASSHAQSSP Trigger: GGGAGAAGATTGAGCATGACTACTGGCAGGTTCCCAGGAAAGGGGTGAAGGCAAGTGAAGTCTTCCAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS TCA 72 bp | CGGGACCATCCAACAATAGCCACGACTACCACTGGCTaGGAAATCTTGTCCAGAATCTCTATGGCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RDHPTIATTTTG*EILSRISMASW Trigger: CCAGGAAGCCATAGAGATTCTGGACAAGATTTCTCAGCCAGTGGTAGTCGTGGCTATTGTTGGATGGTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS GCA 72 bp | TGCTTCTTCAGCATCATGTTATGGTCTTTGATGAGCTaGTCTCTCTCCTGCATCAGCTTTCTCCTCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: CFFSIMLWSLMS*SLSCISFLLSC Trigger: GCAACTGAGGAGAAAGCTGATGCAGGAGAGAGAGCAGCTCATCAAAGACCATAACATGATGCTGAAGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS CAA 72 bp | AGCTTTCTTCTTAAATCCTTCCTCAAGGAAAGCCTTTaGATCCTTCAGCTGCTTCTTCAGCATCATGTTATG | + |
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Preference number: 6 (lower is better) Translates to: SFLLKSFLKESL*ILQLLLQHHVM Trigger: CATAACATGATGCTGAAGAAGCAGCTGAAGGATCAAAAGGCTTTCCTTGAGGAAGGATTTAAGAAGAAAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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| CDS CAA 90 bp | TTTCTTTTCTTATCCTTGATGACATCTCTCAGTTGCTGTATCTCTTaGTTCATTTCCTCAGCTTTCTTCTTAAATCCTTCCTCAAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: FLFLSLMTSLSCCIS*FISSAFFLNPSSRK Trigger: TTTCCTTGAGGAAGGATTTAAGAAGAAAGCTGAGGAAATGAACAAAGAGATACAGCAACTGAGAGATGTCATCAAGGATAAGAAAAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065588.7 |
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