Pregenerated sensors for GBE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022707Ensembl transcript IDs: ENSMUST00000023393.15, ENSMUST00000163832.8, ENSMUST00000170464.3, ENSMUST00000171132.8
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGGTATCTGTGACTATAAATAAGGAGACAGCATTGGAAATATTCTaGTTGCTCCTTCTCTTGTGCATCCCTCCCTTCTCTGCTTCATTG | + |
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Preference number: 1 (lower is better) Translates to: MVSVTINKETALEIF*LLLLLCIPPFSASL Trigger: CAATGAAGCAGAGAAGGGAGGGATGCACAAGAGAAGGAGCAAGCAGAATATTTCCAATGCTGTCTCCTTATTTATAGTCACAGATACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR CAA 90 bp | GAAACAGACGCCATGGTATCTGTGACTATAAATAAGGAGACAGCATaGGAAATATTCTGCTTGCTCCTTCTCTTGTGCATCCCTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: ETDAMVSVTINKETA*EIFCLLLLLCIPPF Trigger: GAAGGGAGGGATGCACAAGAGAAGGAGCAAGCAGAATATTTCCAATGCTGTCTCCTTATTTATAGTCACAGATACCATGGCGTCTGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR CAA 90 bp | GATTTAGGCCTCTCATTCTTCCCTCCTCTCGGCTTTACCCTGTCCTaGTCTTGTTTTCCCATGGGATACTTAGCTTCTCAACCATTTATT | + |
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Preference number: 2 (lower is better) Translates to: DLGLSFFPPLGFTLS*SCFPMGYLASQPFI Trigger: AATAAATGGTTGAGAAGCTAAGTATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAATGAGAGGCCTAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGACTTTACAACTCCCCTTACAAATGGCTGCTGAGTCCATTCTACTTCAGCATCCCTCCCTTCTCTaGTTCATTGACCATTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: TETLQLPLQMAAESILLQHPSLL*FIDHSD Trigger: ATCAGAATGGTCAATGAAGCAGAGAAGGGAGGGATG...CTGAAGTAGAATGGACTCAGCAGCCATTTGTAAGGGGAGTTGTAAAGTCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGACTTTACAACTCCCCTTACAAATGGCTGCTGAGTCCATTCTACTTCAGGCATTGGAAATATTCTaGTTGCTCCTTCTCTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: TETLQLPLQMAAESILLQALEIF*LLLLLC Trigger: GCACAAGAGAAGGAGCAAGCAGAATATTTCCAATGC...CTGAAGTAGAATGGACTCAGCAGCCATTTGTAAGGGGAGTTGTAAAGTCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGTCCAGCCTGATGTTTTaGCTAGACAGCAGTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: SLQKSEISASTETVYGQESSLMF*LDSSVL Trigger: CAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGA...CTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| 3UTR-3UTR CCA 90 bp | AATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTTCCAGCCTGATGTTTTaGCTAGACAGCAGTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: NATMTTSSLQKSEISASTSSLMF*LDSSVL Trigger: CAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGA...AGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| 3UTR-3UTR GCA 90 bp | AATACAGCTTTAAAAATCTTCTCTTACATGATCTCAGTTGGTGCTGTTAGCCTTTGGAAATATTCTGCTTaGTCCTTCTCTTGTGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: NTALKIFSYMISVGAVSLWKYSA*SFSCAS Trigger: GGATGCACAAGAGAAGGAGCAAGCAGAATATTTCCA...AAGGCTAACAGCACCAACTGAGATCATGTAAGAGAAGATTTTTAAAGCTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGAAATCTCTCTTTCCATGCAGACTCGGACATTAAAACTTGTCATAGTACAAAAATCTTCTCTTACATaGTCTCAGTTGGTGCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LEISLSMQTRTLKLVIVQKSSLT*SQLVLL Trigger: TAACAGCACCAACTGAGATCATGTAAGAGAAGATTT...TTGTACTATGACAAGTTTTAATGTCCGAGTCTGCATGGAAAGAGAGATTTCAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR-3UTR CAA 90 bp | TCATTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATTGGAAATATTCTGCTaGCTCCTTCTCTTGTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SFFPPLGFTLSLSCFPMGLEIFC*LLLLCI Trigger: GATGCACAAGAGAAGGAGCAAGCAGAATATTTCCAA...TCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR CCA 72 bp | TTGCGTATTCCAACGCTGAGTTCCAGCCTGATGTTTTaGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCT | + |
|
Preference number: 3 (lower is better) Translates to: LRIPTLSSSLMF*LDSSVLQSLHA Trigger: AGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACTCAGCGTTGGAATACGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| 3UTR GCA 72 bp | ACAGCATTGGAAATATTCTGCTTGCTCCTTCTCTTGTaGATCCCTCCCTTCTCTGCTTCATTGACCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TALEIFCLLLLL*IPPFSASLTIL Trigger: CAGAATGGTCAATGAAGCAGAGAAGGGAGGGATGCACAAGAGAAGGAGCAAGCAGAATATTTCCAATGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR GCA 72 bp | CTGCTGAGTCCATTCTACTTCAGAGAGAGCTTCATGTaGCATTTGCTATTCTGTCTAGAGCACCTTAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: LLSPFYFRESFM*HLLFCLEHLSS Trigger: TGAGCTAAGGTGCTCTAGACAGAATAGCAAATGGCACATGAAGCTCTCTCTGAAGTAGAATGGACTCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR-3UTR CAA 90 bp | CATTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATAAATATCAGAAAGGATaGAAACAGACGCCATGGTAT | + |
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Preference number: 3 (lower is better) Translates to: HSSLLSALPCPCLVFPWDKYQKG*KQTPWY Trigger: ATACCATGGCGTCTGTTTCAATCCTTTCTGATATTT...ATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR-3UTR CAA 90 bp | AGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGCTAGACAGCAGTGTTTaGCAAAGCTTACACGCTATC | + |
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Preference number: 3 (lower is better) Translates to: SLQKSEISASTETVYGQELDSSV*QSLHAI Trigger: GATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAG...CTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| 3UTR CCA 72 bp | ACCCGTTATCTAAGGATGGTCTATGCTTCTAACCACTaGGCTGGCCTTCCTTATTTTACTATCTCCATACTA | + |
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Preference number: 3 (lower is better) Translates to: TRYLRMVYASNH*AGLPYFTISIL Trigger: TAGTATGGAGATAGTAAAATAAGGAAGGCCAGCCCAGTGGTTAGAAGCATAGACCATCCTTAGATAACGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR CCA 72 bp | CTAAAAAGACTGAGACTTTACAACTCCCCTTACAAATaGCTGCTGAGTCCATTCTACTTCAGAGAGAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LKRLRLYNSPYK*LLSPFYFRESF Trigger: GAAGCTCTCTCTGAAGTAGAATGGACTCAGCAGCCATTTGTAAGGGGAGTTGTAAAGTCTCAGTCTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGAAAGCAACTTATATGTTaGCGTATTCCAACGCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: KSEISASTETVYGQESTRKQLIC*RIPTLS Trigger: ACTCAGCGTTGGAATACGCAAACATATAAGTTGCTT...TCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| 3UTR-3UTR CAA 90 bp | GTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATAGAAAGCAACTTATATGTTaGCGTATTCCAACGCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: VKYQRLLKQYTDRRVQDRKQLIC*RIPTLS Trigger: ACTCAGCGTTGGAATACGCAAACATATAAGTTGCTT...TCTATCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| 3UTR-3UTR CAA 90 bp | AGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTAAGCAACTTATATGTTaGCGTATTCCAACGCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: RNATMTTSSLQKSEISASKQLIC*RIPTLS Trigger: ACTCAGCGTTGGAATACGCAAACATATAAGTTGCTT...AGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| 3UTR-3UTR CAA 90 bp | AAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGAGCAAATCCTAATTTCTaGGATGGCTTTGAAATAGAC | + |
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Preference number: 3 (lower is better) Translates to: KSEISASTETVYGQESTRANPNF*DGFEID Trigger: GTCTATTTCAAAGCCATCCAAGAAATTAGGATTTGC...TCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACTGTGCTACACTTCATTaGCAAATCCTAATTTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: LQVFRRVKYQRLLKQYTDCATLH*QILISW Trigger: CCAAGAAATTAGGATTTGCAAATGAAGTGTAGCACA...GTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| 3UTR-3UTR CAA 90 bp | ACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACATGTGCTACACTTCATTaGCAAATCCTAATTTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: TMTTSSLQKSEISASTETCATLH*QILISW Trigger: CCAAGAAATTAGGATTTGCAAATGAAGTGTAGCACA...TGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| 3UTR-3UTR CAA 90 bp | AAAGACATTATCAGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAATGTGCTACACTTCATTaGCAAATCCTAATTTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: KDIIRNATMTTSSLQKSECATLH*QILISW Trigger: CCAAGAAATTAGGATTTGCAAATGAAGTGTAGCACA...TTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCTGATAATGTCTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR GCA 90 bp | CATACTAAGGTCCTGGATTTAGGCCTCTCATTCTTCCCTCCTCTCGGCTTTACCCTGGGGCCCATTCTTTaGAGTAGATGCCACCATCAG | + |
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Preference number: 4 (lower is better) Translates to: HTKVLDLGLSFFPPLGFTLGPIL*SRCHHQ Trigger: CTGATGGTGGCATCTACTGCAAAGAATGGGCCCCAG...GGTAAAGCCGAGAGGAGGGAAGAATGAGAGGCCTAAATCCAGGACCTTAGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR CCA 90 bp | GCTGCTGAGTCCATTCTACTTCAGAGAGAGCTTCATGTGCCATTTGCTATTCTGGCCTCCCTGGGAAGTTaGAGAACAGAGAGCCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: AAESILLQRELHVPFAILASLGS*RTESRH Trigger: ATGCCGGCTCTCTGTTCTCCAACTTCCCAGGGAGGC...CAGAATAGCAAATGGCACATGAAGCTCTCTCTGAAGTAGAATGGACTCAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR CCA 90 bp | TTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATACAAACCACCGCCTCCCTaGGAAGTTGGAGAACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FFPPLGFTLSLSCFPMGYKPPPP*EVGEQR Trigger: TCTCTGTTCTCCAACTTCCCAGGGAGGCGGTGGTTT...GTATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR CCA 90 bp | AGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACGCCTCCCTGGGAAGTTaGAGAACAGAGAGCCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SLMFWLDSSVLQSLHAINASLGS*RTESRH Trigger: ATGCCGGCTCTCTGTTCTCCAACTTCCCAGGGAGGC...GTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR TCA 90 bp | TCATTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATCTGTGGATGCCAAATaGCTCATAGCCTCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SFFPPLGFTLSLSCFPMGSVDAK*LIASGE Trigger: TTCTCCAGAGGCTATGAGTCATTTGGCATCCACAGA...TCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR TCA 90 bp | GCTGCTGAGTCCATTCTACTTCAGAGAGAGCTTCATGTGCCATTTGCTATTCTGGTAGGCCTGTGGAGCTaGAAGCCAACCACATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: AAESILLQRELHVPFAILVGLWS*KPTTSF Trigger: GAAAGATGTGGTTGGCTTTCAGCTCCACAGGCCTAC...CAGAATAGCAAATGGCACATGAAGCTCTCTCTGAAGTAGAATGGACTCAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR GCA 90 bp | CATTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATCTTGTCACCAACCAATaGCTGATCATGACTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HSSLLSALPCPCLVFPWDLVTNQ*LIMTLC Trigger: GCAGAGAGTCATGATCAGGCATTGGTTGGTGACAAG...ATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR CCA 90 bp | TTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATACAAAAGGATATTTCCCTaGTGTTGCTGTCCCGACTCG | + |
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Preference number: 4 (lower is better) Translates to: FFPPLGFTLSLSCFPMGYKRIFP*CCCPDS Trigger: CGAGTCGGGACAGCAACACCAGGGAAATATCCTTTT...GTATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR TCA 90 bp | GCTGCTGAGTCCATTCTACTTCAGAGAGAGCTTCATGTGCCATTTGCTATTCTGGATCAATTACTGGAGTaGAAGGGGCCAGAACGCTCA | + |
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Preference number: 4 (lower is better) Translates to: AAESILLQRELHVPFAILDQLLE*KGPERS Trigger: TGAGCGTTCTGGCCCCTTTCACTCCAGTAATTGATC...CAGAATAGCAAATGGCACATGAAGCTCTCTCTGAAGTAGAATGGACTCAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR TCA 90 bp | TTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATTGCAGATCCACATTCTaGAGGATGAGAGCCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: FQPDVLARQQCFAKLTRYCRSTF*RMRATR Trigger: CCGAGTGGCTCTCATCCTTCAGAATGTGGATCTGCA...ATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR GCA 90 bp | AGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACCTGGGGCCCATTCTTTaGAGTAGATGCCACCATCAG | + |
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Preference number: 4 (lower is better) Translates to: SLMFWLDSSVLQSLHAINLGPIL*SRCHHQ Trigger: CTGATGGTGGCATCTACTGCAAAGAATGGGCCCCAG...GTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR GCA 90 bp | TTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCTGGGGCCCATTCTTTaGAGTAGATGCCACCATCAG | + |
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Preference number: 4 (lower is better) Translates to: FQPDVLARQQCFAKLTRYLGPIL*SRCHHQ Trigger: CTGATGGTGGCATCTACTGCAAAGAATGGGCCCCAG...ATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR GCA 90 bp | TTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATACAAGAAAAACTCCTTCTaGTCCTGGGGCCCATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: FFPPLGFTLSLSCFPMGYKKNSF*SWGPFF Trigger: AAAGAATGGGCCCCAGGAGCAGAAGGAGTTTTTCTT...GTATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR GCA 90 bp | AAGGTTAGCTACCTCAAGTCCCGCACTTTTCAGATGAGGAGGCTGAGTTCAATATTGCCCATGGGGAAATaGGATACAGTATCTCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KVSYLKSRTFQMRRLSSILPMGK*DTVSRH Trigger: GTGGCGAGATACTGTATCGCATTTCCCCATGGGCAA...TATTGAACTCAGCCTCCTCATCTGAAAAGTGCGGGACTTGAGGTAGCTAACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR GCA 90 bp | TCATTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATCCAACCATTCAGGATaGCCAAACTCATTACCCATG | + |
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Preference number: 4 (lower is better) Translates to: SFFPPLGFTLSLSCFPMGSNHSG*PNSLPM Trigger: CATGGGTAATGAGTTTGGGCATCCTGAATGGTTGGA...TCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR CCA 90 bp | CCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGCCTCCCTGGGAAGTTaGAGAACAGAGAGCCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PLQVFRRVKYQRLLKQYTASLGS*RTESRH Trigger: ATGCCGGCTCTCTGTTCTCCAACTTCCCAGGGAGGC...CGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CCA 90 bp | GTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATAGAGCCTCCCTGGGAAGTTaGAGAACAGAGAGCCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VKYQRLLKQYTDRRVQDRASLGS*RTESRH Trigger: ATGCCGGCTCTCTGTTCTCCAACTTCCCAGGGAGGC...TCTATCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CCA 90 bp | AGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACAAACCACCGCCTCCCTaGGAAGTTGGAGAACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLMFWLDSSVLQSLHAINKPPPP*EVGEQR Trigger: TCTCTGTTCTCCAACTTCCCAGGGAGGCGGTGGTTT...GTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CCA 90 bp | AGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTGAGAGCCACTCGGCTTaGAATGTACACCAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SSSLMFWLDSSVLQSLHAESHSA*NVHQKR Trigger: TCTCTTCTGGTGTACATTCCAAGCCGAGTGGCTCTC...AGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CCA 90 bp | AACGCTGAGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTGAGAGCCACTCGGCTTaGAATGTACACCAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: NAEFQPDVLARQQCFAKLESHSA*NVHQKR Trigger: TCTCTTCTGGTGTACATTCCAAGCCGAGTGGCTCTC...AAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACTCAGCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR TCA 90 bp | ATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACACTGTGCCACATTCTGAAGGATaGGAGCCACTCGGCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MFWLDSSVLQSLHAINTVPHSEG*EPLGLE Trigger: TTCCAAGCCGAGTGGCTCTCATCCTTCAGAATGTGG...CACAGTGTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | AGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGTGCAGATCCACATTCTaGAGGATGAGAGCCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQKSEISASTETVYGQECRSTF*RMRATR Trigger: CCGAGTGGCTCTCATCCTTCAGAATGTGGATCTGCA...CTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | ATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACACTGTGTGCAGATCCACATTCTaGAGGATGAGAGCCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MFWLDSSVLQSLHAINTVCRSTF*RMRATR Trigger: CCGAGTGGCTCTCATCCTTCAGAATGTGGATCTGCA...CACAGTGTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | TTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATTTGCCCATGGGGAAATaGGATACAGTATCTCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQPDVLARQQCFAKLTRYLPMGK*DTVSRH Trigger: GTGGCGAGATACTGTATCGCATTTCCCCATGGGCAA...ATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | CATTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATCACATACTTTGCCCATaGGGAAATGCGATACAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLLSALPCPCLVFPWDHILCP*GNAIQY Trigger: ATACTGTATCGCATTTCCCCATGGGCAAAGTATGTG...ATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACACTGTGAAACCACCGCCTCCCTaGGAAGTTGGAGAACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MFWLDSSVLQSLHAINTVKPPPP*EVGEQR Trigger: TCTCTGTTCTCCAACTTCCCAGGGAGGCGGTGGTTT...CACAGTGTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| 3UTR CAA 72 bp | TTTGCGTATTCCAACGCTGAGTTCCAGCCTGATGTTTaGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGC | + |
|
Preference number: 4 (lower is better) Translates to: FAYSNAEFQPDV*ARQQCFAKLTR Trigger: GCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACTCAGCGTTGGAATACGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | AGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACTCTGTGGATGCCAAATaGCTCATAGCCTCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLMFWLDSSVLQSLHAINSVDAK*LIASGE Trigger: TTCTCCAGAGGCTATGAGTCATTTGGCATCCACAGA...GTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | AACGCTGAGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTAGTAAGCATGTTCCATaGTCGCCATCAACTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: NAEFQPDVLARQQCFAKLSKHVP*SPSTEC Trigger: GCATTCAGTTGATGGCGATCATGGAACATGCTTACT...AAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACTCAGCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGAGTCCATTCTACTTCAGAGAGAGCTTCATGTGCCATTTGCTATTCTGTTTGAAGCATGGCTATaGACCACATCTAGGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AAESILLQRELHVPFAILFEAWL*TTSRRT Trigger: AGTCCTCCTAGATGTGGTTCATAGCCATGCTTCAAA...CAGAATAGCAAATGGCACATGAAGCTCTCTCTGAAGTAGAATGGACTCAGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACACTGTGGATCAATTACTGGAGTaGAAGGGGCCAGAACGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MFWLDSSVLQSLHAINTVDQLLE*KGPERS Trigger: TGAGCGTTCTGGCCCCTTTCACTCCAGTAATTGATC...CACAGTGTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATACAGACGAATCATCTTATaGAGCTGTATTCCTCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FFPPLGFTLSLSCFPMGYRRIIL*SCIPRS Trigger: TGATCGAGGAATACAGCTTCATAAGATGATTCGTCT...GTATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR TCA 90 bp | GTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATAGAGTAGGCCTGTGGAGCTaGAAGCCAACCACATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKYQRLLKQYTDRRVQDRVGLWS*KPTTSF Trigger: GAAAGATGTGGTTGGCTTTCAGCTCCACAGGCCTAC...TCTATCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACGTAGGCCTGTGGAGCTaGAAGCCAACCACATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRRVKYQRLLKQYTDVGLWS*KPTTSF Trigger: GAAAGATGTGGTTGGCTTTCAGCTCCACAGGCCTAC...GTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | CCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGTAGGCCTGTGGAGCTaGAAGCCAACCACATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLQVFRRVKYQRLLKQYTVGLWS*KPTTSF Trigger: GAAAGATGTGGTTGGCTTTCAGCTCCACAGGCCTAC...CGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACCCACATTCTGAAGGATaGGAGCCACTCGGCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRRVKYQRLLKQYTDPHSEG*EPLGLE Trigger: TTCCAAGCCGAGTGGCTCTCATCCTTCAGAATGTGG...GTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | AGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTCAGAACATCTGTGGATaGCAAATGACTCATAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLMFWLDSSVLQSLHAQNICG*QMTHSL Trigger: GAGGCTATGAGTCATTTGGCATCCACAGATGTTCTG...AGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | GTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATAGACTGGGGCCCATTCTTTaGAGTAGATGCCACCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKYQRLLKQYTDRRVQDRLGPIL*SRCHHQ Trigger: CTGATGGTGGCATCTACTGCAAAGAATGGGCCCCAG...TCTATCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | TTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCTTGTCACCAACCAATaGCTGATCATGACTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQPDVLARQQCFAKLTRYLVTNQ*LIMTLC Trigger: GCAGAGAGTCATGATCAGGCATTGGTTGGTGACAAG...ATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | TTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATACATCTTAATAGGCACATaGACTGGCAGAGAAAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FFPPLGFTLSLSCFPMGYILIGT*TGREKD Trigger: ATCCTTTTCTCTGCCAGTGCATGTGCCTATTAAGAT...GTATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATGACTCATAGCCTCTaGAGAACTTATCGATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLMFWLDSSVLQSLHAMTHSL*RTYRSH Trigger: GTGGGATCGATAAGTTCTCCAGAGGCTATGAGTCAT...AGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | CATTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATTTTGGTACCCAAAACTaGCATAGTAAGCATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSLLSALPCPCLVFPWDFGTQN*HSKHVP Trigger: TGGAACATGCTTACTATGCCAGTTTTGGGTACCAAA...ATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR CCA 90 bp | GTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATAGAAAACCACCGCCTCCCTaGGAAGTTGGAGAACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKYQRLLKQYTDRRVQDRKPPPP*EVGEQR Trigger: TCTCTGTTCTCCAACTTCCCAGGGAGGCGGTGGTTT...TCTATCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | AGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACCCTCAGCAAAGTAGTTaGTGTTGTGGTCCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLMFWLDSSVLQSLHAINPQQSS*CCGPVS Trigger: AGAGACTGGACCACAACACCAACTACTTTGCTGAGG...GTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| 3UTR CAA 72 bp | ATTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTaGTTTTCCCATGGGATACTTAGCTTCTCAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: ILPSSRLYPVLV*FSHGILSFSTI Trigger: AATGGTTGAGAAGCTAAGTATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACTTTGAAGCATGGCTATaGACCACATCTAGGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SLMFWLDSSVLQSLHAINFEAWL*TTSRRT Trigger: AGTCCTCCTAGATGTGGTTCATAGCCATGCTTCAAA...GTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATTTTGAAGCATGGCTATaGACCACATCTAGGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FQPDVLARQQCFAKLTRYFEAWL*TTSRRT Trigger: AGTCCTCCTAGATGTGGTTCATAGCCATGCTTCAAA...ATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | GTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATAGAGATCAATTACTGGAGTaGAAGGGGCCAGAACGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKYQRLLKQYTDRRVQDRDQLLE*KGPERS Trigger: TGAGCGTTCTGGCCCCTTTCACTCCAGTAATTGATC...TCTATCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACAAGAAAAACTCCTTCTaGTCCTGGGGCCCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLMFWLDSSVLQSLHAINKKNSF*SWGPFF Trigger: AAAGAATGGGCCCCAGGAGCAGAAGGAGTTTTTCTT...GTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | TTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATAAGAAAAACTCCTTCTaGTCCTGGGGCCCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FQPDVLARQQCFAKLTRYKKNSF*SWGPFF Trigger: AAAGAATGGGCCCCAGGAGCAGAAGGAGTTTTTCTT...ATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATTGCCCATGGGGAAATaGGATACAGTATCTCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSEISASTETVYGQESTRLPMGK*DTVSRH Trigger: GTGGCGAGATACTGTATCGCATTTCCCCATGGGCAA...TCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | ATCCTTCATAAGCAACTTATATGTTTGCGTATTCCAACGCTGAGTTCCAGCCTGCTTGTCACCAACCAATaGCTGATCATGACTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILHKQLICLRIPTLSSSLLVTNQ*LIMTLC Trigger: GCAGAGAGTCATGATCAGGCATTGGTTGGTGACAAG...CAGGCTGGAACTCAGCGTTGGAATACGCAAACATATAAGTTGCTTATGAAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | ATCCTTCATAAGCAACTTATATGTTTGCGTATTCCAACGCTGAGTTCCAGCCTGCCTCAGCAAAGTAGTTaGTGTTGTGGTCCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILHKQLICLRIPTLSSSLPQQSS*CCGPVS Trigger: AGAGACTGGACCACAACACCAACTACTTTGCTGAGG...CAGGCTGGAACTCAGCGTTGGAATACGCAAACATATAAGTTGCTTATGAAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACGAGAGCCACTCGGCTTaGAATGTACACCAGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRRVKYQRLLKQYTDESHSA*NVHQKR Trigger: TCTCTTCTGGTGTACATTCCAAGCCGAGTGGCTCTC...GTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | AAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATCTGTGGATGCCAAATaGCTCATAGCCTCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSEISASTETVYGQESTRSVDAK*LIASGE Trigger: TTCTCCAGAGGCTATGAGTCATTTGGCATCCACAGA...TCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | CAAGTCCCGCACTTTTCAGATGAGGAGGCTGAGTTCAATATCCTTGTTAGTTTTAGTAAGCATGTTCCATaGTCGCCATCAACTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QVPHFSDEEAEFNILVSFSKHVP*SPSTEC Trigger: GCATTCAGTTGATGGCGATCATGGAACATGCTTACT...AAAACTAACAAGGATATTGAACTCAGCCTCCTCATCTGAAAAGTGCGGGACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTTCATAAGCAACTTATATGTTTGCGTATTCCAACGCTGAGTTCCAGCCTGTTTGAAGCATGGCTATaGACCACATCTAGGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ILHKQLICLRIPTLSSSLFEAWL*TTSRRT Trigger: AGTCCTCCTAGATGTGGTTCATAGCCATGCTTCAAA...CAGGCTGGAACTCAGCGTTGGAATACGCAAACATATAAGTTGCTTATGAAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGACTTGTCACCAACCAATaGCTGATCATGACTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSEISASTETVYGQESTRLVTNQ*LIMTLC Trigger: GCAGAGAGTCATGATCAGGCATTGGTTGGTGACAAG...TCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGTCCAACCATTCAGGATaGCCAAACTCATTACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLQKSEISASTETVYGQESNHSG*PNSLPM Trigger: CATGGGTAATGAGTTTGGGCATCCTGAATGGTTGGA...CTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACACTGTGATGACTCATAGCCTCTaGAGAACTTATCGATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MFWLDSSVLQSLHAINTVMTHSL*RTYRSH Trigger: GTGGGATCGATAAGTTCTCCAGAGGCTATGAGTCAT...CACAGTGTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCGCACTTTTCAGATGAGGAGGCTGAGTTCAATATCCTTGTTAGTTTTATGACTCATAGCCTCTaGAGAACTTATCGATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVPHFSDEEAEFNILVSFMTHSL*RTYRSH Trigger: GTGGGATCGATAAGTTCTCCAGAGGCTATGAGTCAT...AAAACTAACAAGGATATTGAACTCAGCCTCCTCATCTGAAAAGTGCGGGACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCGCACTTTTCAGATGAGGAGGCTGAGTTCAATATCCTTGTTAGTTTTTTTATAGGGGTCTTCTaGAGCCCAGTGTATCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: QVPHFSDEEAEFNILVSFFIGVF*SPVYPI Trigger: GATTGGATACACTGGGCTCCAGAAGACCCCTATAAA...AAAACTAACAAGGATATTGAACTCAGCCTCCTCATCTGAAAAGTGCGGGACTTG 43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTTTTGGTACCCAAAACTaGCATAGTAAGCATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLMFWLDSSVLQSLHAFGTQN*HSKHVP Trigger: TGGAACATGCTTACTATGCCAGTTTTGGGTACCAAA...AGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACCCTCAGCAAAGTAGTTaGTGTTGTGGTCCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRRVKYQRLLKQYTDPQQSS*CCGPVS Trigger: AGAGACTGGACCACAACACCAACTACTTTGCTGAGG...GTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGAGTCCATTCTACTTCAGAGAGAGCTTCATGTGCCATTTGCTATTCTGAATAGGCACATGCACTaGCAGAGAAAAGGATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAESILLQRELHVPFAILNRHMH*QRKGYF Trigger: GAAATATCCTTTTCTCTGCCAGTGCATGTGCCTATT...CAGAATAGCAAATGGCACATGAAGCTCTCTCTGAAGTAGAATGGACTCAGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTTCTGTGGATGCCAAATaGCTCATAGCCTCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNATMTTSSLQKSEISASSVDAK*LIASGE Trigger: TTCTCCAGAGGCTATGAGTCATTTGGCATCCACAGA...AGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGTAAGCATGTTCCATaGTCGCCATCAACTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRRVKYQRLLKQYTDSKHVP*SPSTEC Trigger: GCATTCAGTTGATGGCGATCATGGAACATGCTTACT...GTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | CCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGTCCAACCATTCAGGATaGCCAAACTCATTACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PLQVFRRVKYQRLLKQYTSNHSG*PNSLPM Trigger: CATGGGTAATGAGTTTGGGCATCCTGAATGGTTGGA...CGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACACTGTGTTTGTTCTGCTTGGGTaGGATATACAGCTCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: MFWLDSSVLQSLHAINTVFVLLG*DIQLPF Trigger: AAATGGGAGCTGTATATCCCACCCAAGCAGAACAAA...CACAGTGTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | ATCCTTCATAAGCAACTTATATGTTTGCGTATTCCAACGCTGAGTTCCAGCCTGAGACGAATCATCTTATaGAGCTGTATTCCTCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ILHKQLICLRIPTLSSSLRRIIL*SCIPRS Trigger: TGATCGAGGAATACAGCTTCATAAGATGATTCGTCT...CAGGCTGGAACTCAGCGTTGGAATACGCAAACATATAAGTTGCTTATGAAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | ATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACACTGTGAATCTAGTACAATTTTaGACTTCCCTGGTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MFWLDSSVLQSLHAINTVNLVQF*TSLVLL Trigger: CAGCAACACCAGGGAAGTTCAAAATTGTACTAGATT...CACAGTGTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163832.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACACTGTGTTCTCTCCAATGTCATaGAAAACCTGGCTAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: MFWLDSSVLQSLHAINTVFSPMS*KTWLNF Trigger: GAAGTTTAGCCAGGTTTTGCATGACATTGGAGAGAA...CACAGTGTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | ATCCTTCATAAGCAACTTATATGTTTGCGTATTCCAACGCTGAGTTCCAGCCTGAATGCCCATCGAATGTaGTGTGTCAACAAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILHKQLICLRIPTLSSSLNAHRM*CVNKFF Trigger: AAAGAACTTGTTGACACAGCACATTCGATGGGCATT...CAGGCTGGAACTCAGCGTTGGAATACGCAAACATATAAGTTGCTTATGAAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAATGCCCATCGAATGTaGTGTGTCAACAAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLQKSEISASTETVYGQENAHRM*CVNKFF Trigger: AAAGAACTTGTTGACACAGCACATTCGATGGGCATT...CTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGCTGATCATGACTCTCTaGATAAGCCACACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQKSEISASTETVYGQELIMTL*ISHTFF Trigger: GAAAAATGTGTGGCTTATGCAGAGAGTCATGATCAG...CTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | CAAGTCCCGCACTTTTCAGATGAGGAGGCTGAGTTCAATATCCTTGTTAGTTTTCTGATCATGACTCTCTaGATAAGCCACACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVPHFSDEEAEFNILVSFLIMTL*ISHTFF Trigger: GAAAAATGTGTGGCTTATGCAGAGAGTCATGATCAG...AAAACTAACAAGGATATTGAACTCAGCCTCCTCATCTGAAAAGTGCGGGACTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR GCA 90 bp | AATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTTCCAACCATTCAGGATaGCCAAACTCATTACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NATMTTSSLQKSEISASTSNHSG*PNSLPM Trigger: CATGGGTAATGAGTTTGGGCATCCTGAATGGTTGGA...AGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | CCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGTTTGTTCTGCTTGGGTaGGATATACAGCTCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLQVFRRVKYQRLLKQYTFVLLG*DIQLPF Trigger: AAATGGGAGCTGTATATCCCACCCAAGCAGAACAAA...CGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | AGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATCACATACTTTGCCCATaGGGAAATGCGATACAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RVKYQRLLKQYTDRRVQDHILCP*GNAIQY Trigger: ATACTGTATCGCATTTCCCCATGGGCAAAGTATGTG...ATCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | GTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATAGACACATACTTTGCCCATaGGGAAATGCGATACAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VKYQRLLKQYTDRRVQDRHILCP*GNAIQY Trigger: ATACTGTATCGCATTTCCCCATGGGCAAAGTATGTG...TCTATCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | AGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTTTTATAGGGGTCTTCTaGAGCCCAGTGTATCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: RNATMTTSSLQKSEISASFIGVF*SPVYPI Trigger: GATTGGATACACTGGGCTCCAGAAGACCCCTATAAA...AGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | AATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTTTTATAGGGGTCTTCTaGAGCCCAGTGTATCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: NATMTTSSLQKSEISASTFIGVF*SPVYPI Trigger: GATTGGATACACTGGGCTCCAGAAGACCCCTATAAA...AGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGACGAATCATCTTATaGAGCTGTATTCCTCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LQVFRRVKYQRLLKQYTDRRIIL*SCIPRS Trigger: TGATCGAGGAATACAGCTTCATAAGATGATTCGTCT...GTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR TCA 90 bp | AGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATAGACGAATCATCTTATaGAGCTGTATTCCTCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RVKYQRLLKQYTDRRVQDRRIIL*SCIPRS Trigger: TGATCGAGGAATACAGCTTCATAAGATGATTCGTCT...ATCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATTCTCTCCAATGTCATaGAAAACCTGGCTAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSEISASTETVYGQESTRFSPMS*KTWLNF Trigger: GAAGTTTAGCCAGGTTTTGCATGACATTGGAGAGAA...TCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | CCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGAATGCCCATCGAATGTaGTGTGTCAACAAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLQVFRRVKYQRLLKQYTNAHRM*CVNKFF Trigger: AAAGAACTTGTTGACACAGCACATTCGATGGGCATT...CGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCTTGTGCATCCCTCCCTTCTCTGCTTCATTGACCATTCTGATCTAAAAGAGTATACACTATATTaGCCATATTCCAGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSLVHPSLLCFIDHSDLKEYTLY*PYSSLH Trigger: ATGAAGACTGGAATATGGGCAATATAGTGTATACTC...TTTTAGATCAGAATGGTCAATGAAGCAGAGAAGGGAGGGATGCACAAGAGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTCACATACTTTGCCCATaGGGAAATGCGATACAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RNATMTTSSLQKSEISASHILCP*GNAIQY Trigger: ATACTGTATCGCATTTCCCCATGGGCAAAGTATGTG...AGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATTTGGTACCCAAAACTaGCATAGTAAGCATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSEISASTETVYGQESTRFGTQN*HSKHVP Trigger: TGGAACATGCTTACTATGCCAGTTTTGGGTACCAAA...TCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | CCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGTTTGGTACCCAAAACTaGCATAGTAAGCATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLQVFRRVKYQRLLKQYTFGTQN*HSKHVP Trigger: TGGAACATGCTTACTATGCCAGTTTTGGGTACCAAA...CGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACACTGTGCGTATAGCTCTTGCTTaGGTGGAAGTTGAAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: MFWLDSSVLQSLHAINTVRIALA*VEVENK Trigger: TTTATTTTCAACTTCCACCCAAGCAAGAGCTATACG...CACAGTGTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | AGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGCGTATAGCTCTTGCTTaGGTGGAAGTTGAAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLQKSEISASTETVYGQERIALA*VEVENK Trigger: TTTATTTTCAACTTCCACCCAAGCAAGAGCTATACG...CTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | ACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACATTCTCTCCAATGTCATaGAAAACCTGGCTAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TMTTSSLQKSEISASTETFSPMS*KTWLNF Trigger: GAAGTTTAGCCAGGTTTTGCATGACATTGGAGAGAA...TGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | AAAGACATTATCAGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAAAGAAAAACTCCTTCTaGTCCTGGGGCCCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KDIIRNATMTTSSLQKSEKKNSF*SWGPFF Trigger: AAAGAATGGGCCCCAGGAGCAGAAGGAGTTTTTCTT...TTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCTGATAATGTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | ATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATCAACACTGTGGAGTATACACTATATTaGCCATATTCCAGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MFWLDSSVLQSLHAINTVEYTLY*PYSSLH Trigger: ATGAAGACTGGAATATGGGCAATATAGTGTATACTC...CACAGTGTTGATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | ACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACACTGATCATGACTCTCTaGATAAGCCACACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TMTTSSLQKSEISASTETLIMTL*ISHTFF Trigger: GAAAAATGTGTGGCTTATGCAGAGAGTCATGATCAG...TGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | CCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGAATAAAGAGAAGTCCTaGTCTCTCAAAGGTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLQVFRRVKYQRLLKQYTNKEKS*SLKGDC Trigger: ACAATCACCTTTGAGAGAGCAGGACTTCTCTTTATT...CGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGAAATAAAGAGAAGTCCTaGTCTCTCAAAGGTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSEISASTETVYGQESTRNKEKS*SLKGDC Trigger: ACAATCACCTTTGAGAGAGCAGGACTTCTCTTTATT...TCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | CCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGATATGGGTGAGAAAATaGATTCCAACCACTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: PLQVFRRVKYQRLLKQYTIWVRK*IPTTEF Trigger: GAATTCAGTGGTTGGAATCCATTTTCTCACCCATAT...CGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | GTATCTGTGACTATAAATAAGGAGACAGCATTGGAAATATTCTGCTTGCTCCTTTTTGTTCTGCTTGGGTaGGATATACAGCTCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VSVTINKETALEIFCLLLFVLLG*DIQLPF Trigger: AAATGGGAGCTGTATATCCCACCCAAGCAGAACAAA...AAGGAGCAAGCAGAATATTTCCAATGCTGTCTCCTTATTTATAGTCACAGATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAAATCTCTCTTTCCATGCAGACTCGGACATTAAAACTTGTCATAGTACAATTCTCTCCAATGTCATaGAAAACCTGGCTAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEISLSMQTRTLKLVIVQFSPMS*KTWLNF Trigger: GAAGTTTAGCCAGGTTTTGCATGACATTGGAGAGAA...TTGTACTATGACAAGTTTTAATGTCCGAGTCTGCATGGAAAGAGAGATTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR GCA 90 bp | GTATCTGTGACTATAAATAAGGAGACAGCATTGGAAATATTCTGCTTGCTCCTTAATGCCCATCGAATGTaGTGTGTCAACAAGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSVTINKETALEIFCLLLNAHRM*CVNKFF Trigger: AAAGAACTTGTTGACACAGCACATTCGATGGGCATT...AAGGAGCAAGCAGAATATTTCCAATGCTGTCTCCTTATTTATAGTCACAGATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGAGAGTATACACTATATTaGCCATATTCCAGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSEISASTETVYGQESTREYTLY*PYSSLH Trigger: ATGAAGACTGGAATATGGGCAATATAGTGTATACTC...TCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CCA 90 bp | AGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTATATGGGTGAGAAAATaGATTCCAACCACTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RNATMTTSSLQKSEISASIWVRK*IPTTEF Trigger: GAATTCAGTGGTTGGAATCCATTTTCTCACCCATAT...AGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CCA 90 bp | AAAGACATTATCAGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAATTTGTTCTGCTTGGGTaGGATATACAGCTCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KDIIRNATMTTSSLQKSEFVLLG*DIQLPF Trigger: AAATGGGAGCTGTATATCCCACCCAAGCAGAACAAA...TTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCTGATAATGTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR TCA 90 bp | AAAGACATTATCAGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAATATACCCAAGGTCTTTaGTTCTTGGTAGTACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KDIIRNATMTTSSLQKSEYTQGL*FLVVHC Trigger: GCAATGTACTACCAAGAATCAAAGACCTTGGGTATA...TTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCTGATAATGTCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR GCA 90 bp | ACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGAGTATACACTATATTaGCCATATTCCAGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TMTTSSLQKSEISASTETEYTLY*PYSSLH Trigger: ATGAAGACTGGAATATGGGCAATATAGTGTATACTC...TGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR GCA 90 bp | AAAGACATTATCAGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAACTGATCATGACTCTCTaGATAAGCCACACATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDIIRNATMTTSSLQKSELIMTL*ISHTFF Trigger: GAAAAATGTGTGGCTTATGCAGAGAGTCATGATCAG...TTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCTGATAATGTCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR GCA 90 bp | GTATCTGTGACTATAAATAAGGAGACAGCATTGGAAATATTCTGCTTGCTCCTTAATAAAGAGAAGTCCTaGTCTCTCAAAGGTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSVTINKETALEIFCLLLNKEKS*SLKGDC Trigger: ACAATCACCTTTGAGAGAGCAGGACTTCTCTTTATT...AAGGAGCAAGCAGAATATTTCCAATGCTGTCTCCTTATTTATAGTCACAGATAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR CCA 90 bp | CTTGAAATCTCTCTTTCCATGCAGACTCGGACATTAAAACTTGTCATAGTACAACGTATAGCTCTTGCTTaGGTGGAAGTTGAAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEISLSMQTRTLKLVIVQRIALA*VEVENK Trigger: TTTATTTTCAACTTCCACCCAAGCAAGAGCTATACG...TTGTACTATGACAAGTTTTAATGTCCGAGTCTGCATGGAAAGAGAGATTTCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS-3UTR GCA 90 bp | AAAGACATTATCAGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAAATAAAGAGAAGTCCTaGTCTCTCAAAGGTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KDIIRNATMTTSSLQKSENKEKS*SLKGDC Trigger: ACAATCACCTTTGAGAGAGCAGGACTTCTCTTTATT...TTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCTGATAATGTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CCA 90 bp | AAAGACATTATCAGAAATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAACGTATAGCTCTTGCTTaGGTGGAAGTTGAAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: KDIIRNATMTTSSLQKSERIALA*VEVENK Trigger: TTTATTTTCAACTTCCACCCAAGCAAGAGCTATACG...TTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATTTCTGATAATGTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS TCA 90 bp | ACCACCGCCTCCCTGGGAAGTTGGAGAACAGAGAGCCGGCATCCCTaGTACATCCTCTGCTATTGTTATCGAGTCTGGGTACAACGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TTASLGSWRTESRHP*YILCYCYRVWVQRV Trigger: CACACGTTGTACCCAGACTCGATAACAATAGCAGAGGATGTATCAGGGATGCCGGCTCTCTGTTCTCCAACTTCCCAGGGAGGCGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS TCA 90 bp | TCTGATGACCTCCATACTCCGCTGCGTCAGAATCTAGTACAATTTTaGACGTCCCTGGTGTTGCTGTCCCGACTCGGTAGTCCGTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SDDLHTPLRQNLVQF*TSLVLLSRLGSPYS Trigger: GCTATACGGACTACCGAGTCGGGACAGCAACACCAGGGACGTTCAAAATTGTACTAGATTCTGACGCAGCGGAGTATGGAGGTCATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023393.15 ENSMUST00000170464.3 |
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| CDS CCA 90 bp | GAGAATAGGGGCGCCCATTATGTTCAAAAGCCTCAGCAAAGTAGTTaGTGTTGTGGTCCAGTCTCTGATGACCTCCATACTCCGCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ENRGAHYVQKPQQSS*CCGPVSDDLHTPLR Trigger: ACGCAGCGGAGTATGGAGGTCATCAGAGACTGGACCACAACACCAACTACTTTGCTGAGGCTTTTGAACATAATGGGCGCCCCTATTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CAA 90 bp | TTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATACGGGGATTTGTTCTGCTaGGGTGGGATATACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FFPPLGFTLSLSCFPMGYGDLFC*GGIYSS Trigger: GGAGCTGTATATCCCACCCAAGCAGAACAAATCCCC...GTATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
||
| CDS TCA 90 bp | TCTGATGACCTCCATACTCCGCTGCGTCAGAATCTAGTACAATTTTaGACTTCCCTGGTGTTGCTGTCCCGACTCGGTAGTCCGTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SDDLHTPLRQNLVQF*TSLVLLSRLGSPYS Trigger: GCTATACGGACTACCGAGTCGGGACAGCAACACCAGGGAAGTTCAAAATTGTACTAGATTCTGACGCAGCGGAGTATGGAGGTCATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163832.8 |
||
| CDS CCA 90 bp | CCCTGGTGTTGCTGTCCCGACTCGGTAGTCCGTATAGCTCTTGCTTaGGTGGAAGTTGAAAATAAAGAGAAGTCCTGCTCTCTCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PWCCCPDSVVRIALA*VEVENKEKSCSLKG Trigger: ACCTTTGAGAGAGCAGGACTTCTCTTTATTTTCAACTTCCACCCAAGCAAGAGCTATACGGACTACCGAGTCGGGACAGCAACACCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS GCA 90 bp | CCTCTGGAGAACTTATCGATCCCACCTTCATTCTCTCCAATGTCATaGAAAACCTGGCTAAACTTCTTATACCTGCGCTGGAAGTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PLENLSIPPSFSPMS*KTWLNFLYLRWKSA Trigger: CGCGGACTTCCAGCGCAGGTATAAGAAGTTTAGCCAGGTTTTGCATGACATTGGAGAGAATGAAGGTGGGATCGATAAGTTCTCCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS GCA 90 bp | GGGCCCATTCTTTGCAGTAGATGCCACCATCAGAACATCTGTGGATaGCAAATGACTCATAGCCTCTGGAGAACTTATCGATCCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPILCSRCHHQNICG*QMTHSLWRTYRSHL Trigger: AAGGTGGGATCGATAAGTTCTCCAGAGGCTATGAGTCATTTGGCATCCACAGATGTTCTGATGGTGGCATCTACTGCAAAGAATGGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS-3UTR CAA 90 bp | AACGCTGAGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTGGGGATTTGTTCTGCTaGGGTGGGATATACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NAEFQPDVLARQQCFAKLGDLFC*GGIYSS Trigger: GGAGCTGTATATCCCACCCAAGCAGAACAAATCCCC...AAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACTCAGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | AGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTGGGGATTTGTTCTGCTaGGGTGGGATATACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLMFWLDSSVLQSLHAGDLFC*GGIYSS Trigger: GGAGCTGTATATCCCACCCAAGCAGAACAAATCCCC...AGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | AACGCTGAGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTCACGAACCACATACTTaGCCCATGGGGAAATGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: NAEFQPDVLARQQCFAKLHEPHT*PMGKCD Trigger: ATCGCATTTCCCCATGGGCAAAGTATGTGGTTCGTG...AAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACTCAGCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS TCA 90 bp | GACGAATCATCTTATGAAGCTGTATTCCTCGATCAATTACTGGAGTaGAAGGGGCCAGAACGCTCATGTTCGTGTACATCTCAGCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DESSYEAVFLDQLLE*KGPERSCSCTSQRP Trigger: TGGACGCTGAGATGTACACGAACATGAGCGTTCTGGCCCCTTTCACTCCAGTAATTGATCGAGGAATACAGCTTCATAAGATGATTCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS GCA 90 bp | AAACGCCAGTGTCTTGTCACCAACCAATGCCTGATCATGACTCTCTaGATAAGCCACACATTTTTCAAGGTAGCGTCGATTGGTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KRQCLVTNQCLIMTL*ISHTFFKVASIGES Trigger: ACTCTCACCAATCGACGCTACCTTGAAAAATGTGTGGCTTATGCAGAGAGTCATGATCAGGCATTGGTTGGTGACAAGACACTGGCGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS TCA 90 bp | TTCTTTGCAGTAGATGCCACCATCAGAACATCTGTGGATGCCAAATaGCTCATAGCCTCTGGAGAACTTATCGATCCCACCTTCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FFAVDATIRTSVDAK*LIASGELIDPTFIL Trigger: GAGAATGAAGGTGGGATCGATAAGTTCTCCAGAGGCTATGAGTCATTTGGCATCCACAGATGTTCTGATGGTGGCATCTACTGCAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS CCA 90 bp | GATGAGACGAATCATCTTATGAAGCTGTATTCCTCGATCAATTACTaGAGTGAAAGGGGCCAGAACGCTCATGTTCGTGTACATCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DETNHLMKLYSSINY*SERGQNAHVRVHLS Trigger: GCTGAGATGTACACGAACATGAGCGTTCTGGCCCCTTTCACTCCAGTAATTGATCGAGGAATACAGCTTCATAAGATGATTCGTCTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS-3UTR CAA 90 bp | AAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGAGGGGATTTGTTCTGCTaGGGTGGGATATACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSEISASTETVYGQESTRGDLFC*GGIYSS Trigger: GGAGCTGTATATCCCACCCAAGCAGAACAAATCCCC...TCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | CATTCTTCCCTCCTCTCGGCTTTACCCTGTCCTTGTCTTGTTTTCCCATGGGATTTATACCCAAGGTCTTaGATTCTTGGTAGTACATTG | + |
|
Preference number: 5 (lower is better) Translates to: HSSLLSALPCPCLVFPWDLYPRS*ILGSTL Trigger: CAATGTACTACCAAGAATCAAAGACCTTGGGTATAA...ATCCCATGGGAAAACAAGACAAGGACAGGGTAAAGCCGAGAGGAGGGAAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR CAA 90 bp | CATACTAAGGTCCTGGATTTAGGCCTCTCATTCTTCCCTCCTCTCGGCTTTACCAGAGTATACACTATATaGCCCATATTCCAGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTKVLDLGLSFFPPLGFTRVYTI*PIFQSS Trigger: TGAAGACTGGAATATGGGCAATATAGTGTATACTCT...GGTAAAGCCGAGAGGAGGGAAGAATGAGAGGCCTAAATCCAGGACCTTAGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR CAA 90 bp | AGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTCATTATTTCCTTTCCTaGGGAAGTCCAACCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLMFWLDSSVLQSLHAHYFLS*GSPTIQ Trigger: CTGAATGGTTGGACTTCCCAAGGAAAGGAAATAATG...AGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | AACGCTGAGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTGAATCTAGTACAATTTaGAACGTCCCTGGTGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NAEFQPDVLARQQCFAKLESSTI*NVPGVA Trigger: AGCAACACCAGGGACGTTCAAAATTGTACTAGATTC...AAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACTCAGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023393.15 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | AGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTGAATCTAGTACAATTTaGAACGTCCCTGGTGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSLMFWLDSSVLQSLHAESSTI*NVPGVA Trigger: AGCAACACCAGGGACGTTCAAAATTGTACTAGATTC...AGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023393.15 ENSMUST00000170464.3 |
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| CDS GCA 90 bp | TATCCAATCATAGTTCACGTTGTTGTTCTCACGAACCACATACTTTaGCCATGGGGAAATGCGATACAGTATCTCGCCACTCTTACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: YPIIVHVVVLTNHIL*PWGNAIQYLATLTS Trigger: ACTAGTAAGAGTGGCGAGATACTGTATCGCATTTCCCCATGGGCAAAGTATGTGGTTCGTGAGAACAACAACGTGAACTATGATTGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS CCA 90 bp | TCTTGGTTTCTTAGGTCTGGAATGCTTGAATTTATAGGGGTCTTCTaGAGCCCAGTGTATCCAATCATAGTTCACGTTGTTGTTCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SWFLRSGMLEFIGVF*SPVYPIIVHVVVLT Trigger: CGTGAGAACAACAACGTGAACTATGATTGGATACACTGGGCTCCAGAAGACCCCTATAAATTCAAGCATTCCAGACCTAAGAAACCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS-3UTR CAA 90 bp | GTATCTGTGACTATAAATAAGGAGACAGCATTGGAAATATTCTGCTTGCTCCTTGATATTTCCCTGGTGTaGCTGTCCCGACTCGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSVTINKETALEIFCLLLDISLV*LSRLGS Trigger: ACTACCGAGTCGGGACAGCAACACCAGGGAAATATC...AAGGAGCAAGCAGAATATTTCCAATGCTGTCTCCTTATTTATAGTCACAGATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS CCA 90 bp | ATCATAGTTCACGTTGTTGTTCTCACGAACCACATACTTTGCCCATaGGGAAATGCGATACAGTATCTCGCCACTCTTACTAGTAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: IIVHVVVLTNHILCP*GNAIQYLATLTSNN Trigger: GTTATTACTAGTAAGAGTGGCGAGATACTGTATCGCATTTCCCCATGGGCAAAGTATGTGGTTCGTGAGAACAACAACGTGAACTATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS-3UTR CAA 90 bp | AACGCTGAGTTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTAGAGTATACACTATATaGCCCATATTCCAGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NAEFQPDVLARQQCFAKLRVYTI*PIFQSS Trigger: TGAAGACTGGAATATGGGCAATATAGTGTATACTCT...AAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAACTCAGCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | ACTGAGACTTTACAACTCCCCTTACAAATGGCTGCTGAGTCCATTCTACTTCAGTTGCTTGGGTGGAAGTaGAAAATAAAGAGAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TETLQLPLQMAAESILLQLLGWK*KIKRSP Trigger: AGGACTTCTCTTTATTTTCAACTTCCACCCAAGCAA...CTGAAGTAGAATGGACTCAGCAGCCATTTGTAAGGGGAGTTGTAAAGTCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS-3UTR CAA 90 bp | TTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATTTATACCCAAGGTCTTaGATTCTTGGTAGTACATTG | + |
|
Preference number: 5 (lower is better) Translates to: FQPDVLARQQCFAKLTRYLYPRS*ILGSTL Trigger: CAATGTACTACCAAGAATCAAAGACCTTGGGTATAA...ATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | TTCCAGCCTGATGTTTTGGCTAGACAGCAGTGTTTTGCAAAGCTTACACGCTATAGAGTATACACTATATaGCCCATATTCCAGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FQPDVLARQQCFAKLTRYRVYTI*PIFQSS Trigger: TGAAGACTGGAATATGGGCAATATAGTGTATACTCT...ATAGCGTGTAAGCTTTGCAAAACACTGCTGTCTAGCCAAAACATCAGGCTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | CCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGCATTATTTCCTTTCCTaGGGAAGTCCAACCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLQVFRRVKYQRLLKQYTHYFLS*GSPTIQ Trigger: CTGAATGGTTGGACTTCCCAAGGAAAGGAAATAATG...CGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS GCA 90 bp | CGTATAGCTCTTGCTTGGGTGGAAGTTGAAAATAAAGAGAAGTCCTaGTCTCTCAAAGGTGATTGTCTTATTGGCTTCATGTTTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RIALAWVEVENKEKS*SLKGDCLIGFMFFT Trigger: AGTGAAAAACATGAAGCCAATAAGACAATCACCTTTGAGAGAGCAGGACTTCTCTTTATTTTCAACTTCCACCCAAGCAAGAGCTATACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTTCATAAGCAACTTATATGTTTGCGTATTCCAACGCTGAGTTCCAGCCTGTTATACCCAAGGTCTTaGATTCTTGGTAGTACATTG | + |
|
Preference number: 5 (lower is better) Translates to: ILHKQLICLRIPTLSSSLLYPRS*ILGSTL Trigger: CAATGTACTACCAAGAATCAAAGACCTTGGGTATAA...CAGGCTGGAACTCAGCGTTGGAATACGCAAACATATAAGTTGCTTATGAAGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
||
| CDS-3UTR CAA 90 bp | AATGCTACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTCATTATTTCCTTTCCTaGGGAAGTCCAACCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NATMTTSSLQKSEISASTHYFLS*GSPTIQ Trigger: CTGAATGGTTGGACTTCCCAAGGAAAGGAAATAATG...AGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGTAGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | CCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACAGTATACGTTGCTTGGGTGGAAGTaGAAAATAAAGAGAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: PLQVFRRVKYQRLLKQYTLLGWK*KIKRSP Trigger: AGGACTTCTCTTTATTTTCAACTTCCACCCAAGCAA...CGTATACTGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | AGAGTGAAATATCAGCGTCTACTGAAACAGTATACGGACAGGAGAGTACAAGATTTATACCCAAGGTCTTaGATTCTTGGTAGTACATTG | + |
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Preference number: 5 (lower is better) Translates to: RVKYQRLLKQYTDRRVQDLYPRS*ILGSTL Trigger: CAATGTACTACCAAGAATCAAAGACCTTGGGTATAA...ATCTTGTACTCTCCTGTCCGTATACTGTTTCAGTAGACGCTGATATTTCACTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | ACAATGACCACTTCAAGTCTTCAGAAGAGTGAAATATCAGCGTCTACTGAAACATTGCTTGGGTGGAAGTaGAAAATAAAGAGAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: TMTTSSLQKSEISASTETLLGWK*KIKRSP Trigger: AGGACTTCTCTTTATTTTCAACTTCCACCCAAGCAA...TGTTTCAGTAGACGCTGATATTTCACTCTTCTGAAGACTTGAAGTGGTCATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 |
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| CDS-3UTR CAA 90 bp | AATACAGCTTTAAAAATCTTCTCTTACATGATCTCAGTTGGTGCTGTTAGCCTTCATTATTTCCTTTCCTaGGGAAGTCCAACCATTCAG | + |
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Preference number: 5 (lower is better) Translates to: NTALKIFSYMISVGAVSLHYFLS*GSPTIQ Trigger: CTGAATGGTTGGACTTCCCAAGGAAAGGAAATAATG...AAGGCTAACAGCACCAACTGAGATCATGTAAGAGAAGATTTTTAAAGCTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS TCA 90 bp | TTATCGAGTCTGGGTACAACGTGTGAGCCAAATGATTTGCCAACATaGGATAAATCAAAGCATCTTCATCTACTTGTAGTCCAAAATATT | + |
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Preference number: 5 (lower is better) Translates to: LSSLGTTCEPNDLPT*DKSKHLHLLVVQNI Trigger: AATATTTTGGACTACAAGTAGATGAAGATGCTTTGATTTATCTCATGTTGGCAAATCATTTGGCTCACACGTTGTACCCAGACTCGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS GCA 72 bp | CATGCACTGGCAGAGAAAAGGATATTTCCCTGGTGTTaGTGTCCCGACTCGGTAGTCCGTATAGCTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HALAEKRIFPWC*CPDSVVRIALA Trigger: AGCAAGAGCTATACGGACTACCGAGTCGGGACAGCAACACCAGGGAAATATCCTTTTCTCTGCCAGTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171132.8 |
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| CDS TCA 72 bp | CTCCATACTCCGCTGCGTCAGAATCTAGTACAATTTTaGACTTCCCTGGTGTTGCTGTCCCGACTCGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LHTPLRQNLVQF*TSLVLLSRLGS Trigger: ACTACCGAGTCGGGACAGCAACACCAGGGAAGTTCAAAATTGTACTAGATTCTGACGCAGCGGAGTATGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163832.8 |
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| CDS TCA 72 bp | GTAGATGCCACCATCAGAACATCTGTGGATGCCAAATaGCTCATAGCCTCTGGAGAACTTATCGATCCCACC | + |
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Preference number: 6 (lower is better) Translates to: VDATIRTSVDAK*LIASGELIDPT Trigger: GGTGGGATCGATAAGTTCTCCAGAGGCTATGAGTCATTTGGCATCCACAGATGTTCTGATGGTGGCATCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS CCA 72 bp | TGCTGTCCCGACTCGGTAGTCCGTATAGCTCTTGCTTaGGTGGAAGTTGAAAATAAAGAGAAGTCCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: CCPDSVVRIALA*VEVENKEKSCS Trigger: AGAGCAGGACTTCTCTTTATTTTCAACTTCCACCCAAGCAAGAGCTATACGGACTACCGAGTCGGGACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS CAA 72 bp | AACAGAGAGCCGGCATCCCTGATACATCCTCTGCTATaGTTATCGAGTCTGGGTACAACGTGTGAGCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: NREPASLIHPLL*LSSLGTTCEPN Trigger: ATTTGGCTCACACGTTGTACCCAGACTCGATAACAATAGCAGAGGATGTATCAGGGATGCCGGCTCTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS CCA 72 bp | CACGTTGTTGTTCTCACGAACCACATACTTTGCCCATaGGGAAATGCGATACAGTATCTCGCCACTCTTACT | + |
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Preference number: 6 (lower is better) Translates to: HVVVLTNHILCP*GNAIQYLATLT Trigger: AGTAAGAGTGGCGAGATACTGTATCGCATTTCCCCATGGGCAAAGTATGTGGTTCGTGAGAACAACAACGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS CAA 72 bp | CATAGTTCACGTTGTTGTTCTCACGAACCACATACTTaGCCCATGGGGAAATGCGATACAGTATCTCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: HSSRCCSHEPHT*PMGKCDTVSRH Trigger: GTGGCGAGATACTGTATCGCATTTCCCCATGGGCAAAGTATGTGGTTCGTGAGAACAACAACGTGAACTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS GCA 72 bp | CTTTGCAGTAGATGCCACCATCAGAACATCTGTGGATaGCAAATGACTCATAGCCTCTGGAGAACTTATCGA | + |
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Preference number: 6 (lower is better) Translates to: LCSRCHHQNICG*QMTHSLWRTYR Trigger: TCGATAAGTTCTCCAGAGGCTATGAGTCATTTGGCATCCACAGATGTTCTGATGGTGGCATCTACTGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS GCA 72 bp | AACTTATCGATCCCACCTTCATTCTCTCCAATGTCATaGAAAACCTGGCTAAACTTCTTATACCTGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: NLSIPPSFSPMS*KTWLNFLYLRW Trigger: CCAGCGCAGGTATAAGAAGTTTAGCCAGGTTTTGCATGACATTGGAGAGAATGAAGGTGGGATCGATAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS GCA 72 bp | TGTCTTGTCACCAACCAATGCCTGATCATGACTCTCTaGATAAGCCACACATTTTTCAAGGTAGCGTCGATT | + |
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Preference number: 6 (lower is better) Translates to: CLVTNQCLIMTL*ISHTFFKVASI Trigger: AATCGACGCTACCTTGAAAAATGTGTGGCTTATGCAGAGAGTCATGATCAGGCATTGGTTGGTGACAAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS TCA 72 bp | TTTGGTACCCAAAACTGGCATAGTAAGCATGTTCCATaGTCGCCATCAACTGAATGCAGTTATACCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: FGTQNWHSKHVP*SPSTECSYTQG Trigger: ACCTTGGGTATAACTGCATTCAGTTGATGGCGATCATGGAACATGCTTACTATGCCAGTTTTGGGTACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS CCA 72 bp | CTTAGGTCTGGAATGCTTGAATTTATAGGGGTCTTCTaGAGCCCAGTGTATCCAATCATAGTTCACGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LRSGMLEFIGVF*SPVYPIIVHVV Trigger: AACAACGTGAACTATGATTGGATACACTGGGCTCCAGAAGACCCCTATAAATTCAAGCATTCCAGACCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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| CDS CCA 72 bp | AATCATCTTATGAAGCTGTATTCCTCGATCAATTACTaGAGTGAAAGGGGCCAGAACGCTCATGTTCGTGTA | + |
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Preference number: 6 (lower is better) Translates to: NHLMKLYSSINY*SERGQNAHVRV Trigger: TACACGAACATGAGCGTTCTGGCCCCTTTCACTCCAGTAATTGATCGAGGAATACAGCTTCATAAGATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023393.15 ENSMUST00000163832.8 ENSMUST00000170464.3 ENSMUST00000171132.8 |
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