Pregenerated sensors for GBA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028467Ensembl transcript IDs: ENSMUST00000030189.14, ENSMUST00000130443.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTaGTGGGAGGAAGGAGGAGGTCCAGTGTGGAGGCTGGGCCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: KEEGRDCPIGSGLQD*WEEGGGPVWRLGLH Trigger: GTGGAGGCCCAGCCTCCACACTGGACCTCCTCCTTCCTCCCACAAGTCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| 3UTR-3UTR CCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGGAGGAGGTCCAGTGTaGAGGCTGGGCCTCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: YWHSWEGRGARLSYWLRAGGGPV*RLGLHS Trigger: ACTGTGGAGGCCCAGCCTCCACACTGGACCTCCTCC...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| 3UTR-3UTR CCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTGGGCTGCAGGACTTGTaGGAGGAAGGAGGAGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PFLLAQLGRKRGAIVLLAGLQDL*EEGGGP Trigger: TGGACCTCCTCCTTCCTCCCACAAGTCCTGCAGCCC...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| 3UTR GCA 72 bp | AGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTaGAGGACTTGTGGGAGGAAGGAGGAGGTCCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: RKRGAIVLLAQG*RTCGRKEEVQC Trigger: ACACTGGACCTCCTCCTTCCTCCCACAAGTCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| 3UTR TCA 72 bp | GTATTTTATTTATACCCATATGTATCTGTTGCCCCGTaGATAGATTTGGAGACATTTACTGGCCTTGAATAC | + |
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Preference number: 3 (lower is better) Translates to: VFYLYPYVSVAP*IDLETFTGLEY Trigger: GTATTCAAGGCCAGTAAATGTCTCCAAATCTATTCACGGGGCAACAGATACATATGGGTATAAATAAAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | GCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTTGTGCCAACGACAGAACTaGCCTCTCCAGCCCCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: AGKEEGRDCPIGSGLQDLCQRQN*PLQPRV Trigger: CACCCGGGGCTGGAGAGGCCAGTTCTGTCGTTGGCA...CAAGTCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGTGCAGCCACAGCCATaGTGTAGGGGTTCGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRAVQPQP*CRGSEG Trigger: CCCCTCCGAACCCCTACACCATGGCTGTGGCTGCAC...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGATGTGTTGGGGTGCTTTaGCCAGCAGGGGAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HSWEGRGARLSYWLRAAGCVGVL*PAGESS Trigger: GCTGGACTCCCCTGCTGGCCAAAGCACCCCAACACA...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | GCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTTGTGGGTTCTGCCAGGCTaGGATTCTGTCCTCCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: AGKEEGRDCPIGSGLQDLWVLPG*DSVLPV Trigger: GACTGGGAGGACAGAATCTCAGCCTGGCAGAACCCA...CAAGTCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | GCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTTGCTATCAGGGACACCATaGGGGTGCATCCCGTTCACG | + |
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Preference number: 4 (lower is better) Translates to: AGKEEGRDCPIGSGLQDLLSGTP*GCIPFT Trigger: CGTGAACGGGATGCACCCTCATGGTGTCCCTGATAG...CAAGTCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | CTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCGCCTGTGGTGACCCATaGATCATAGGTCTGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LAQLGRKRGAIVLLAQGCACGDP*IIGLVC Trigger: GCAGACCAGACCTATGATGCATGGGTCACCACAGGC...GCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCCCTCAGGAACCACTaGCCAGCACACTGGTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRAALRNH*PAHWSD Trigger: GTCTGACCAGTGTGCTGGGCAGTGGTTCCTGAGGGC...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | CTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCGGCGTTCCCATACAGTaGGGTAACAGCCTTCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LAQLGRKRGAIVLLAQGCGVPIQ*GNSLQL Trigger: CAGCTGAAGGCTGTTACCGCACTGTATGGGAACGCC...GCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | CTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCGCTGTCCAGTGCCATTaGGGTCAAAGGCTGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LAQLGRKRGAIVLLAQGCAVQCH*GQRLWC Trigger: ACACCACAGCCTTTGACCCCAATGGCACTGGACAGC...GCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACATATCCCAAGCCAGTaGGAACTCCAAGCAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: HSWEGRGARLSYWLRAAGHIPSQ*ELQAAP Trigger: CGGTGCTGCTTGGAGTTCTCACTGGCTTGGGATATG...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGTTTGGGCCACAGCATaGCGAGGGCAAAGGACGCAT | + |
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Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRAVWATA*RGQRTH Trigger: ATGCGTCCTTTGCCCTCGTCATGCTGTGGCCCAAAC...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTCACTGGGGCCTGTGGTaGCCCATGCATCATAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRAHWGLW*PMHHRS Trigger: AGACCTATGATGCATGGGTCACCACAGGCCCCAGTG...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | CTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCCACACTGGTCAGACATaGTGCTCCGAGACTGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LAQLGRKRGAIVLLAQGCHTGQT*CSETED Trigger: ATCCTCAGTCTCGGAGCATCATGTCTGACCAGTGTG...GCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCACTTTCTGTGTTGGGGTaGTTTGGCCAGCAGGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: WHSWEGRGARLSYWLRAALSVLG*FGQQGS Trigger: ACTCCCCTGCTGGCCAAAGCACCCCAACACAGAAAG...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGAGAGCGGAACACTTGTTaGTGGCAGTATGCCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: HSWEGRGARLSYWLRAAGERNTC*WQYASG Trigger: CCCAGAGGCATACTGCCAGCAACAAGTGTTCCGCTC...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACGGCTCTTTTTATGCTaGTGCTGTTGCAGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HSWEGRGARLSYWLRAAGRLFLC*CCCRAS Trigger: GCTGGCCCTGCAACAGCAGCAGCATAAAAAGAGCCG...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | GCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTTGGGCCTCGGCAGAGAATaGAAGCAAACCTCTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AGKEEGRDCPIGSGLQDLGLGRE*KQTSPG Trigger: TCCAGGAGAGGTTTGCTTCCATTCTCTGCCGAGGCC...CAAGTCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCACACTGCCCAGCACACTaGTCAGACATGATGCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: WHSWEGRGARLSYWLRAAHCPAH*SDMMLR Trigger: TCGGAGCATCATGTCTGACCAGTGTGCTGGGCAGTG...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACGGAACACTTGTTGCTaGCAGTATGCCTCTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: HSWEGRGARLSYWLRAAGRNTCC*QYASGV Trigger: GACCCCAGAGGCATACTGCCAGCAACAAGTGTTCCG...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCACTGCCCAGAGTCCTCTaGATTGCAGTAGCTTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: WHSWEGRGARLSYWLRAALPRVL*IAVAWF Trigger: GAACCAAGCTACTGCAATTCAGAGGACTCTGGGCAG...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAATTCCAGGGTTGAGCTaGCAACGACAGAACTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: WHSWEGRGARLSYWLRAAIPGLS*QRQNWP Trigger: AGGCCAGTTCTGTCGTTGGCAGCTCAACCCTGGAAT...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | CTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCGCAATGACTGTCTGGTaGTGGTACATTCCAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LAQLGRKRGAIVLLAQGCAMTVW*WYIPGL Trigger: CAACCCTGGAATGTACCAGCACCAGACAGTCATTGC...GCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCACCTCCTTTTCACAGGTaGCACCACTCCACTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: WHSWEGRGARLSYWLRAAPPFHR*HHSTHQ Trigger: CTGATGAGTGGAGTGGTGGCACCTGTGAAAAGGAGG...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTAACCATTACAGCCACTaGCGCCAGCCACAGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLANHYSH*RQPQPS Trigger: GGAGGGCTGTGGCTGGCGGCAGTGGCTGTAATGGTT...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTCTGCGGCTCTTTTTATaGTGCTGCTGTTGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRALRLFL*CCCCRA Trigger: GGCCCTGCAACAGCAGCAGCATAAAAAGAGCCGCAG...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCATCAAAGGCTGTGGTGTaGGTTACCGTGGTATCTGCC | + |
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Preference number: 4 (lower is better) Translates to: WHSWEGRGARLSYWLRAASKAVV*VTVVSA Trigger: GGCAGATACCACGGTAACCCACACCACAGCCTTTGA...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGGATCCCCAATGTCATaGGGGATGACGTTCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRAGSPMS*GMTFLL Trigger: AAGGAGGAACGTCATCCCTCATGACATTGGGGATCC...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGAGAATCAAATATGCGTTaGCCCGGAGCCATGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: HSWEGRGARLSYWLRAAGESNMR*PGAMAH Trigger: ATGAGCCATGGCTCCGGGTCAACGCATATTTGATTC...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAAGGTCTCCTCTTCTCTaGAAACTCGTGAGCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: WHSWEGRGARLSYWLRAARSPLL*KLVSQA Trigger: TGCTTGGCTCACGAGTTTGCAGAGAAGAGGAGACCT...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTTCCAAGGACAGAACTTaGTGGTACACAGTCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRASKDRT*WYTVRP Trigger: TGGGCGGACTGTGTACCAGCAAGTTCTGTCCTTGGA...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCTTCCAGCCACACTGTaGCTCCATCGGCCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLALPATL*LHRPGS Trigger: ACTTCCTGGCCGATGGAGGCACAGTGTGGCTGGAAG...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTTTGTTGCTGGCAGTATaGCTCTGGGGTCTGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRALLLAV*LWGLES Trigger: GCTTTCCAGACCCCAGAGGCATACTGCCAGCAACAA...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGAGTCTTCTTTTCCACGTaGGTCTTTCGGTACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: HSWEGRGARLSYWLRAAGVFFST*VFRYHH Trigger: GTGGTGGTACCGAAAGACCCACGTGGAAAAGAAGAC...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTAAGATAGGTGTGACCTaGCGACAGGTGAGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRAKIGVT*RQVRVT Trigger: TGTCACCCTCACCTGTCGCCAGGTCACACCTATCTT...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCACAATGTCATGAGGGATaGCGTTCCTCCTTTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: WHSWEGRGARLSYWLRAAQCHEG*RSSFSQ Trigger: CTGTGAAAAGGAGGAACGTCATCCCTCATGACATTG...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCACGTATGTGTTGTACATaGGGTACTCCTGGCCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: WHSWEGRGARLSYWLRAARMCCT*GTPGLQ Trigger: TTGAAGGCCAGGAGTACCGCATGTACAACACATACG...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | CTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCATCATAGGTCTGGTCTaGGTAGCCTCCATTCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: LAQLGRKRGAIVLLAQGCIIGLV*VASILN Trigger: ATTGAGAATGGAGGCTACGCAGACCAGACCTATGAT...GCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | GCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTTGAGAGCACGGACCACATaGAGGGTAGGAAATACTTCA | + |
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Preference number: 4 (lower is better) Translates to: AGKEEGRDCPIGSGLQDLRARTT*RVGNTS Trigger: TGAAGTATTTCCTACCCTGCATGTGGTCCGTGCTCT...CAAGTCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGAAGTTCAAAGATGGTTTaGAGAGCACGGACCACATGC | + |
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Preference number: 4 (lower is better) Translates to: HSWEGRGARLSYWLRAAGSSKMV*RARTTC Trigger: GCATGTGGTCCGTGCTCTCCAAACCATCTTTGAACT...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTGGTACATTCCAGGGTTaGGCTGCCAACGACAGAACT | + |
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Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLAGTFQG*AANDRT Trigger: AGTTCTGTCGTTGGCAGCTCAACCCTGGAATGTACC...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCACAGAACAGCCATCTaGACCATTACAGCCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLAHRTAI*TITATA Trigger: GGCAGTGGCTGTAATGGTTCAGATGGCTGTTCTGTG...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | CTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAAGCCCATACCGAGGTaGTTTACCAAATTACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAQLGRKRGAIVLLAQGCKPIPR*FTKLLR Trigger: TCTCAGTAATTTGGTAAAGCACCTCGGTATGGGCTT...GCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTTGGGGTCAAAGGCTGTaGTGTGGGTTACCGTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLAWGQRL*CGLPWY Trigger: ATACCACGGTAACCCACACCACAGCCTTTGACCCCA...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCACAGTCAGCAGTATCATaGATCAAATATGCGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: WHSWEGRGARLSYWLRAAQSAVS*IKYALT Trigger: GGTCAACGCATATTTGATTCATGATACTGCTGACTG...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTCAGTTCATTGAACAGTaGAGATTTGTACCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRAQFIEQ*RFVPGR Trigger: CCTGCCTGGTACAAATCTGCACTGTTCAATGAACTG...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR GCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTATCATGAATCAAATATaGGTTGACCCGGAGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRAIMNQI*VDPEPW Trigger: CCATGGCTCCGGGTCAACGCATATTTGATTCATGAT...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTTCTGCAATGACTGTCTaGTGCTGGTACATTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLASAMTV*CWYIPG Trigger: CCCTGGAATGTACCAGCACCAGACAGTCATTGCAGA...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR TCA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGGAAGTACAGTTCATTaGACAGTGCAGATTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: YWHSWEGRGARLSYWLRAGSTVH*TVQICT Trigger: GGTACAAATCTGCACTGTTCAATGAACTGTACTTCC...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR TCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTAGCCTCCATTCTCAATaGGTCCATCTTGGTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLASLHSQ*VHLGPC Trigger: ACAAGGACCAAGATGGACTCATTGAGAATGGAGGCT...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCCTCCTGCAAAGGCTTaGACGTTGAGTTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLAPPAKA*TLSSKM Trigger: CATCTTTGAACTCAACGTCCAAGCCTTTGCAGGAGG...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR TCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTTATCATACTGAAGACTaGGCTCAAGTTTGGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLAYHTED*AQVWAT Trigger: TGTGGCCCAAACTTGAGCTCAGTCTTCAGTATGATA...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR GCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGAGTCCTCTGAATTaGAGTAGCTTGGTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLAQSPLN*SSLVHP Trigger: AGGATGAACCAAGCTACTGCAATTCAGAGGACTCTG...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CCA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGATCAATGAGTCCATCTTaGTCCTTGTCAAACTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: HSWEGRGARLSYWLRAAGSMSPS*SLSNFI Trigger: AATGAAGTTTGACAAGGACCAAGATGGACTCATTGA...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR TCA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTGAGATGTTGTTAGCTTaGAAAGGTCTCCTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFLLAQLGRKRGAIVLLAEMLLA*KGLLFS Trigger: AGAGAAGAGGAGACCTTTTCAAGCTAACAACATCTC...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTGTGTTGGGGTGCTTaGGCCAGCAGGGGAGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSWEGRGARLSYWLRAAGLCWGA*ASRGVQ Trigger: CTGGACTCCCCTGCTGGCCAAAGCACCCCAACACAG...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS TCA 90 bp | CTGCCGCCAGCCACAGCCCTCCGCAGTAAGCACTGGGGCCTGTGGTaGCCCATGCATCATAGGTCTGGTCTGCGTAGCCTCCATTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPPATALRSKHWGLW*PMHHRSGLRSLHSQ Trigger: TTGAGAATGGAGGCTACGCAGACCAGACCTATGATGCATGGGTCACCACAGGCCCCAGTGCTTACTGCGGAGGGCTGTGGCTGGCGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 90 bp | ATCTTGGGCCCCACACAGAACAGCCATCTGAACCATTACAGCCACTaGCGCCAGCCACAGCCCTCCGCAGTAAGCACTGGGGCCTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ILGPTQNSHLNHYSH*RQPQPSAVSTGACG Trigger: ACCACAGGCCCCAGTGCTTACTGCGGAGGGCTGTGGCTGGCGGCAGTGGCTGTAATGGTTCAGATGGCTGTTCTGTGTGGGGCCCAAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 90 bp | GTCTGGTGCTGGTACATTCCAGGGTTGAGCTGCCAACGACAGAACTaGCCTCTCCAGCCCCGGGTGATAGTGCCTCCTCCAATGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: VWCWYIPGLSCQRQN*PLQPRVIVPPPMPP Trigger: GGGTGGCATTGGAGGAGGCACTATCACCCGGGGCTGGAGAGGCCAGTTCTGTCGTTGGCAGCTCAACCCTGGAATGTACCAGCACCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
||
| CDS CCA 90 bp | GGTCCTGCCACACCTGCTGTCCAGTGCCATTGGGGTCAAAGGCTGTaGTGTGGGTTACCGTGGTATCTGCCGTGCATCGTGCAGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GPATPAVQCHWGQRL*CGLPWYLPCIVQPQ Trigger: CTGTGGCTGCACGATGCACGGCAGATACCACGGTAACCCACACCACAGCCTTTGACCCCAATGGCACTGGACAGCAGGTGTGGCAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | CTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCGGAGCGGAACACTTGTaGCTGGCAGTATGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAQLGRKRGAIVLLAQGCGAEHL*LAVCLW Trigger: CCAGAGGCATACTGCCAGCAACAAGTGTTCCGCTCC...GCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 90 bp | TGCCACACCTGCTGTCCAGTGCCATTGGGGTCAAAGGCTGTGGTGTaGGTTACCGTGGTATCTGCCGTGCATCGTGCAGCCACAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CHTCCPVPLGSKAVV*VTVVSAVHRAATAM Trigger: CATGGCTGTGGCTGCACGATGCACGGCAGATACCACGGTAACCCACACCACAGCCTTTGACCCCAATGGCACTGGACAGCAGGTGTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCACTCCAAGGACAGAACTaGCTGGTACACAGTCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WHSWEGRGARLSYWLRAALQGQN*LVHSPP Trigger: GGGCGGACTGTGTACCAGCAAGTTCTGTCCTTGGAG...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CAA 90 bp | CTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGACTGAGCTCAAGTTaGGGCCACAGCATGACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAQLGRKRGAIVLLAQGCRLSSS*GHSMTR Trigger: CCTCGTCATGCTGTGGCCCAAACTTGAGCTCAGTCT...GCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS TCA 90 bp | GGCCGCAGGCCCTCAGGAACCACTGCCCAGCACACTGGTCAGACATaGTGCTCCGAGACTGAGGATGGGAGCTGCTGTCGTAGTTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GRRPSGTTAQHTGQT*CSETEDGSCCRSCN Trigger: ATTACAACTACGACAGCAGCTCCCATCCTCAGTCTCGGAGCATCATGTCTGACCAGTGTGCTGGGCAGTGGTTCCTGAGGGCCTGCGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS GCA 90 bp | CGGATCCCCAATGTCATGAGGGATGACGTTCCTCCTTTTCACAGGTaGCACCACTCCACTCATCAGGTACCGTCGCCGGGTCAGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RIPNVMRDDVPPFHR*HHSTHQVPSPGQVL Trigger: GAGGACCTGACCCGGCGACGGTACCTGATGAGTGGAGTGGTGGCACCTGTGAAAAGGAGGAACGTCATCCCTCATGACATTGGGGATCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS GCA 90 bp | CAGCCACAGCCCTCCGCAGTAAGCACTGGGGCCTGTGGTGACCCATaGATCATAGGTCTGGTCTGCGTAGCCTCCATTCTCAATGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPQPSAVSTGACGDP*IIGLVCVASILNES Trigger: GGACTCATTGAGAATGGAGGCTACGCAGACCAGACCTATGATGCATGGGTCACCACAGGCCCCAGTGCTTACTGCGGAGGGCTGTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CCA 90 bp | GTCCATCCTGAAGTAGGTCCTGCCACACCTGCTGTCCAGTGCCATTaGGGTCAAAGGCTGTGGTGTGGGTTACCGTGGTATCTGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VHPEVGPATPAVQCH*GQRLWCGLPWYLPC Trigger: GCACGGCAGATACCACGGTAACCCACACCACAGCCTTTGACCCCAATGGCACTGGACAGCAGGTGTGGCAGGACCTACTTCAGGATGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CAA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTCAGGGAGCGGAACACTaGTTGCTGGCAGTATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YWHSWEGRGARLSYWLRAQGAEH*LLAVCL Trigger: GAGGCATACTGCCAGCAACAAGTGTTCCGCTCCCTG...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS GCA 90 bp | CTTTACCCTCGTAGGAGGCCATCAGCTGCCCAGAGTCCTCTGAATTaGAGTAGCTTGGTTCATCCTGGGGTCCACTATCCTCGGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LYPRRRPSAAQSPLN*SSLVHPGVHYPRGS Trigger: GGAGCCCCGAGGATAGTGGACCCCAGGATGAACCAAGCTACTGCAATTCAGAGGACTCTGGGCAGCTGATGGCCTCCTACGAGGGTAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
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| CDS GCA 90 bp | CCAGCTGTCCATCCTGAAGTAGGTCCTGCCACACCTGCTGTCCAGTaGCATTGGGGTCAAAGGCTGTGGTGTGGGTTACCGTGGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAVHPEVGPATPAVQ*HWGQRLWCGLPWYL Trigger: CAGATACCACGGTAACCCACACCACAGCCTTTGACCCCAATGGCACTGGACAGCAGGTGTGGCAGGACCTACTTCAGGATGGACAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CAA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTTCGAGGTAACAGCTaGCTAGAGACGCATACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSWEGRGARLSYWLRAAGLRGNS*LETHTA Trigger: GGCTGTATGCGTCTCTAGCAAGCTGTTACCTCGAAG...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CAA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCCTCTCCTGGACATCTaGGGCCCCACACAGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PFLLAQLGRKRGAIVLLAPLLDI*GPTQNS Trigger: GCTGTTCTGTGTGGGGCCCAAGATGTCCAGGAGAGG...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS TCA 90 bp | CCTAGCTTTACCCTCGTAGGAGGCCATCAGCTGCCCAGAGTCCTCTaGATTGCAGTAGCTTGGTTCATCCTGGGGTCCACTATCCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSFTLVGGHQLPRVL*IAVAWFILGSTILG Trigger: CCCGAGGATAGTGGACCCCAGGATGAACCAAGCTACTGCAATTCAGAGGACTCTGGGCAGCTGATGGCCTCCTACGAGGGTAAAGCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
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| CDS TCA 90 bp | CCCGGAGCCATGGCTCATCATCCGGATCCCCAATGTCATGAGGGATaGCGTTCCTCCTTTTCACAGGTGCCACCACTCCACTCATCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGAMAHHPDPQCHEG*RSSFSQVPPLHSSG Trigger: ACCTGATGAGTGGAGTGGTGGCACCTGTGAAAAGGAGGAACGTCATCCCTCATGACATTGGGGATCCGGATGATGAGCCATGGCTCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CAA 90 bp | GCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTTGCTCAGGGGTAGAGAATaGAGCATGTCGATGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGKEEGRDCPIGSGLQDLLRGRE*SMSMKG Trigger: CCCTTTCATCGACATGCTCAATTCTCTACCCCTGAG...CAAGTCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CAA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTTGGTACATTCCAGGGTaGAGCTGCCAACGACAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: YWHSWEGRGARLSYWLRAWYIPG*SCQRQN Trigger: GTTCTGTCGTTGGCAGCTCAACCCTGGAATGTACCA...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CAA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCACCGCCTGTAGTGGACTaGGCTTTTAGCTCCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: WHSWEGRGARLSYWLRAAPPVVD*AFSSKH Trigger: ATGTTTGGAGCTAAAAGCCAAGTCCACTACAGGCGG...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS-3UTR CAA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCATGGACATCGTATGTGTaGTACATGCGGTACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WHSWEGRGARLSYWLRAAWTSYV*YMRYSW Trigger: CCAGGAGTACCGCATGTACAACACATACGATGTCCA...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | GCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTTGGAGTTCAAAGATGGTTaGGAGAGCACGGACCACATG | + |
|
Preference number: 5 (lower is better) Translates to: AGKEEGRDCPIGSGLQDLEFKDG*ESTDHM Trigger: CATGTGGTCCGTGCTCTCCAAACCATCTTTGAACTC...CAAGTCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 90 bp | CCAGGCAGGCAAGGTTCTGTCATCCAGTACTGGGTTCTGCCAGGCTaGGATTCTGTCCTCCCAGTCTGCATAGTGGCACAGTGCATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGRQGSVIQYWVLPG*DSVLPVCIVAQCIV Trigger: CACTATGCACTGTGCCACTATGCAGACTGGGAGGACAGAATCTCAGCCTGGCAGAACCCAGTACTGGATGACAGAACCTTGCCTGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 90 bp | AGCAAAGTAACCACACAGGCCCCAGTTCCAGCTGCGCAGGACATTTaGAAGCTCCAAGGACAGAACTTGCTGGTACACAGTCCGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SKVTTQAPVPAAQDI*KLQGQNLLVHSPPI Trigger: GATGGGCGGACTGTGTACCAGCAAGTTCTGTCCTTGGAGCTTCCAAATGTCCTGCGCAGCTGGAACTGGGGCCTGTGTGGTTACTTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 90 bp | CGTTCCACAGCAGTCTCTCATAAGCTTCTCGGCCTCGGCAGAGAATaGAAGCAAACCTCTCCTGGACATCTTGGGCCCCACACAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: RSTAVSHKLLGLGRE*KQTSPGHLGPHTEQ Trigger: CTGTTCTGTGTGGGGCCCAAGATGTCCAGGAGAGGTTTGCTTCCATTCTCTGCCGAGGCCGAGAAGCTTATGAGAGACTGCTGTGGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | TGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGTCCTCCTTCAAAGTaGCCAGAGCCATATCATACT | + |
|
Preference number: 5 (lower is better) Translates to: WHSWEGRGARLSYWLRAAGPPSK*PEPYHT Trigger: AGTATGATATGGCTCTGGCAACTTTGAAGGAGGACC...TGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 90 bp | GTGGCACAGTGCATAGTGGCTCAGGGCAGGCGCCACATCACCATCTaGACCAAAGAACCGTGTATACCGCCTGTAGTGGACTTGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VAQCIVAQGRRHITI*TKEPCIPPVVDLAF Trigger: AAAAGCCAAGTCCACTACAGGCGGTATACACGGTTCTTTGGTTCAGATGGTGATGTGGCGCCTGCCCTGAGCCACTATGCACTGTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 90 bp | GGGCGTGGTAGAAAGCAAAGTAACCACACAGGCCCCAGTTCCAGCTaGGCAGGACATTTGGAAGCTCCAAGGACAGAACTTGCTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: GRGRKQSNHTGPSSS*AGHLEAPRTELAGT Trigger: TGTACCAGCAAGTTCTGTCCTTGGAGCTTCCAAATGTCCTGCGCAGCTGGAACTGGGGCCTGTGTGGTTACTTTGCTTTCTACCACGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 90 bp | ACTCCTACAGGGAGACTGCTGTCTTGGTCTGCAATGACTGTCTGGTaGTGGTACATTCCAGGGTTGAGCTGCCAACGACAGAACTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TPTGRLLSWSAMTVW*WYIPGLSCQRQNWP Trigger: AGGCCAGTTCTGTCGTTGGCAGCTCAACCCTGGAATGTACCAGCACCAGACAGTCATTGCAGACCAAGACAGCAGTCTCCCTGTAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130443.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTAGCTGCGCAGGACATTaGGAAGCTCCAAGGACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PFLLAQLGRKRGAIVLLASCAGH*EAPRTE Trigger: TTCTGTCCTTGGAGCTTCCAAATGTCCTGCGCAGCT...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTTTGAACAGTGCAGATTaGTACCAGGCAGGCAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YWHSWEGRGARLSYWLRALNSAD*YQAGKV Trigger: AACCTTGCCTGCCTGGTACAAATCTGCACTGTTCAA...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | CACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGAAGTCCATCTTGGTCCTaGTCAAACTTCATTTCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HSWEGRGARLSYWLRAAGSPSWS*SNFISD Trigger: GTCCGAAATGAAGTTTGACAAGGACCAAGATGGACT...TCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | TACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAAAGGCTTGGACGTaGAGTTCAAAGATGGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YWHSWEGRGARLSYWLRAAKAWT*SSKMVW Trigger: CCAAACCATCTTTGAACTCAACGTCCAAGCCTTTGC...AGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 90 bp | CGGCCGCATCATCTTCGCCTCCTAGTCCATTCCGCATGGAGAACGTaGTGGAAACGTCCAGAGTCTCATCTCCTTCGTTTTCTACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPHHLRLLVHSAWRT*WKRPESHLLRFLHP Trigger: GGGATGTAGAAAACGAAGGAGATGAGACTCTGGACGTTTCCATCACGTTCTCCATGCGGAATGGACTAGGAGGCGAAGATGATGCGGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCCAAGCATACTATAAATaGGTCTGCAATGACTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAQLGRKRGAIVLLAQGCQAYYK*VCNDCL Trigger: CAGACAGTCATTGCAGACCAATTTATAGTATGCTTG...GCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 90 bp | CTTCCAGCCACACTGTGCCTCCATCGGCCAGGAAGTACAGTTCATTaGACAGTGCAGATTTGTACCAGGCAGGCAAGGTTCTGTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPATLCLHRPGSTVH*TVQICTRQARFCHP Trigger: TGGATGACAGAACCTTGCCTGCCTGGTACAAATCTGCACTGTTCAATGAACTGTACTTCCTGGCCGATGGAGGCACAGTGTGGCTGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 90 bp | CCACACTGTGCCTCCATCGGCCAGGAAGTACAGTTCATTGAACAGTaGAGATTTGTACCAGGCAGGCAAGGTTCTGTCATCCAGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHCASIGQEVQFIEQ*RFVPGRQGSVIQYW Trigger: CCAGTACTGGATGACAGAACCTTGCCTGCCTGGTACAAATCTGCACTGTTCAATGAACTGTACTTCCTGGCCGATGGAGGCACAGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 90 bp | GTAAGCACTGGGGCCTGTGGTGACCCATGCATCATAGGTCTGGTCTaGGTAGCCTCCATTCTCAATGAGTCCATCTTGGTCCTTGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSTGACGDPCIIGLV*VASILNESILVLVK Trigger: TTTGACAAGGACCAAGATGGACTCATTGAGAATGGAGGCTACGCAGACCAGACCTATGATGCATGGGTCACCACAGGCCCCAGTGCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | GCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCAGGGCTGCAGGACTTGATCTTCACAATAAACTaGGGAATCTCTTTCGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AGKEEGRDCPIGSGLQDLIFTIN*GISFGT Trigger: TGTGCCGAAAGAGATTCCCAAGTTTATTGTGAAGAT...CAAGTCCTGCAGCCCTGAGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTTCCTCCTGCAAAGGCTaGGACGTTGAGTTCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PFLLAQLGRKRGAIVLLASSCKG*DVEFKD Trigger: ATCTTTGAACTCAACGTCCAAGCCTTTGCAGGAGGA...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 90 bp | GGTTCAGGTCCTTCCAGTCAGCAGTATCATGAATCAAATATGCGTTaGCCCGGAGCCATGGCTCATCATCCGGATCCCCAATGTCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSGPSSQQYHESNMR*PGAMAHHPDPQCHE Trigger: CTCATGACATTGGGGATCCGGATGATGAGCCATGGCTCCGGGTCAACGCATATTTGATTCATGATACTGCTGACTGGAAGGACCTGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 90 bp | CAGTTCCAGCTGCGCAGGACATTTGGAAGCTCCAAGGACAGAACTTaGTGGTACACAGTCCGCCCATCTCGACGCAAGCATACTATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QFQLRRTFGSSKDRT*WYTVRPSRRKHTIN Trigger: ATTTATAGTATGCTTGCGTCGAGATGGGCGGACTGTGTACCAGCAAGTTCTGTCCTTGGAGCTTCCAAATGTCCTGCGCAGCTGGAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 90 bp | TTCCAGCTGCGCAGGACATTTGGAAGCTCCAAGGACAGAACTTGCTaGTACACAGTCCGCCCATCTCGACGCAAGCATACTATAAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: FQLRRTFGSSKDRTC*YTVRPSRRKHTINW Trigger: CCAATTTATAGTATGCTTGCGTCGAGATGGGCGGACTGTGTACCAGCAAGTTCTGTCCTTGGAGCTTCCAAATGTCCTGCGCAGCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 90 bp | TCTCGACGCAAGCATACTATAAATTGGTCTGCAATGACTGTCTGGTaGTGGTACATTCCAGGGTTGAGCTGCCAACGACAGAACTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRRKHTINWSAMTVW*WYIPGLSCQRQNWP Trigger: AGGCCAGTTCTGTCGTTGGCAGCTCAACCCTGGAATGTACCAGCACCAGACAGTCATTGCAGACCAATTTATAGTATGCTTGCGTCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 90 bp | CGAGGGCAAAGGACGCATAAAAGTGGACATCGTATGTGTTGTACATaGGGTACTCCTGGCCTTCAAGATAGCCAAATCGCCCATAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGQRTHKSGHRMCCT*GTPGLQDSQIAHSP Trigger: AGGACTATGGGCGATTTGGCTATCTTGAAGGCCAGGAGTACCGCATGTACAACACATACGATGTCCACTTTTATGCGTCCTTTGCCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 90 bp | GGTAGAGAATTGAGCATGTCGATGAAAGGGGTCTTCTTTTCCACGTaGGTCTTTCGGTACCACCACTTCAAGTACCTCAAGCCCATACCG | + |
|
Preference number: 5 (lower is better) Translates to: GRELSMSMKGVFFST*VFRYHHFKYLKPIP Trigger: CGGTATGGGCTTGAGGTACTTGAAGTGGTGGTACCGAAAGACCCACGTGGAAAAGAAGACCCCTTTCATCGACATGCTCAATTCTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
||
| CDS CCA 90 bp | CCATCTCGACGCAAGCATACTATAAATTGGTCTGCAATGACTGTCTaGTGCTGGTACATTCCAGGGTTGAGCTGCCAACGACAGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSRRKHTINWSAMTV*CWYIPGLSCQRQNW Trigger: CCAGTTCTGTCGTTGGCAGCTCAACCCTGGAATGTACCAGCACCAGACAGTCATTGCAGACCAATTTATAGTATGCTTGCGTCGAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 90 bp | ATGGCTCCTCCTGCAAAGGCTTGGACGTTGAGTTCAAAGATGGTTTaGAGAGCACGGACCACATGCAGGGTAGGAAATACTTCAGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MAPPAKAWTLSSKMV*RARTTCRVGNTSVS Trigger: AGACACTGAAGTATTTCCTACCCTGCATGTGGTCCGTGCTCTCCAAACCATCTTTGAACTCAACGTCCAAGCCTTTGCAGGAGGAGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS-3UTR CAA 90 bp | CCCTTTTTACTGGCACAGCTGGGAAGGAAGAGGGGCGCGATTGTCCTATTGGCTCTCAATGAGTCCATCTaGGTCCTTGTCAAACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PFLLAQLGRKRGAIVLLALNESI*VLVKLH Trigger: ATGAAGTTTGACAAGGACCAAGATGGACTCATTGAG...AGCCAATAGGACAATCGCGCCCCTCTTCCTTCCCAGCTGTGCCAGTAAAAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 90 bp | TGCAATACAAACTTCAGGTTCAGGTCCTTCCAGTCAGCAGTATCATaGATCAAATATGCGTTGACCCGGAGCCATGGCTCATCATCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: CNTNFRFRSFQSAVS*IKYALTRSHGSSSG Trigger: TCCGGATGATGAGCCATGGCTCCGGGTCAACGCATATTTGATTCATGATACTGCTGACTGGAAGGACCTGAACCTGAAGTTTGTATTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 72 bp | GCCACAGCCCTCCGCAGTAAGCACTGGGGCCTGTGGTaGCCCATGCATCATAGGTCTGGTCTGCGTAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATALRSKHWGLW*PMHHRSGLRSL Trigger: GAGGCTACGCAGACCAGACCTATGATGCATGGGTCACCACAGGCCCCAGTGCTTACTGCGGAGGGCTGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 72 bp | CCCACACAGAACAGCCATCTGAACCATTACAGCCACTaGCGCCAGCCACAGCCCTCCGCAGTAAGCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PTQNSHLNHYSH*RQPQPSAVSTG Trigger: CCCAGTGCTTACTGCGGAGGGCTGTGGCTGGCGGCAGTGGCTGTAATGGTTCAGATGGCTGTTCTGTGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CAA 90 bp | CGTAGGAGGCCATCAGCTGCCCAGAGTCCTCTGAATTGCAGTAGCTaGGTTCATCCTGGGGTCCACTATCCTCGGGGCTCCCGCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRRPSAAQSPLNCSS*VHPGVHYPRGSRSL Trigger: CAGACTGCGGGAGCCCCGAGGATAGTGGACCCCAGGATGAACCAAGCTACTGCAATTCAGAGGACTCTGGGCAGCTGATGGCCTCCTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
||
| CDS TCA 72 bp | TCCTGGACATCTTGGGCCCCACACAGAACAGCCATCTaGACCATTACAGCCACTGCCGCCAGCCACAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SWTSWAPHRTAI*TITATAASHSP Trigger: AGGGCTGTGGCTGGCGGCAGTGGCTGTAATGGTTCAGATGGCTGTTCTGTGTGGGGCCCAAGATGTCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 72 bp | CCCTCAGGAACCACTGCCCAGCACACTGGTCAGACATaGTGCTCCGAGACTGAGGATGGGAGCTGCTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: PSGTTAQHTGQT*CSETEDGSCCR Trigger: ACGACAGCAGCTCCCATCCTCAGTCTCGGAGCATCATGTCTGACCAGTGTGCTGGGCAGTGGTTCCTGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 72 bp | CCCTCCGCAGTAAGCACTGGGGCCTGTGGTGACCCATaGATCATAGGTCTGGTCTGCGTAGCCTCCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PSAVSTGACGDP*IIGLVCVASIL Trigger: GAGAATGGAGGCTACGCAGACCAGACCTATGATGCATGGGTCACCACAGGCCCCAGTGCTTACTGCGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 72 bp | TGGTACATTCCAGGGTTGAGCTGCCAACGACAGAACTaGCCTCTCCAGCCCCGGGTGATAGTGCCTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WYIPGLSCQRQN*PLQPRVIVPPP Trigger: TGGAGGAGGCACTATCACCCGGGGCTGGAGAGGCCAGTTCTGTCGTTGGCAGCTCAACCCTGGAATGTACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
||
| CDS CCA 72 bp | CCGTGGTATCTGCCGTGCATCGTGCAGCCACAGCCATaGTGTAGGGGTTCGGAGGGGTTGGATGATGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PWYLPCIVQPQP*CRGSEGLDDAR Trigger: TCTTGCATCATCCAACCCCTCCGAACCCCTACACCATGGCTGTGGCTGCACGATGCACGGCAGATACCACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 72 bp | TGCCATTGGGGTCAAAGGCTGTGGTGTGGGTTACCGTaGTATCTGCCGTGCATCGTGCAGCCACAGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: CHWGQRLWCGLP*YLPCIVQPQPW Trigger: CCATGGCTGTGGCTGCACGATGCACGGCAGATACCACGGTAACCCACACCACAGCCTTTGACCCCAATGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 72 bp | TGCTGTCCAGTGCCATTGGGGTCAAAGGCTGTGGTGTaGGTTACCGTGGTATCTGCCGTGCATCGTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CCPVPLGSKAVV*VTVVSAVHRAA Trigger: GGCTGCACGATGCACGGCAGATACCACGGTAACCCACACCACAGCCTTTGACCCCAATGGCACTGGACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CAA 72 bp | CCCAGCGATACCCTCTCCTTTCTGTGTTGGGGTGCTTaGGCCAGCAGGGGAGTCCAGCTGTCCATCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PSDTLSFLCWGA*ASRGVQLSILK Trigger: CTTCAGGATGGACAGCTGGACTCCCCTGCTGGCCAAAGCACCCCAACACAGAAAGGAGAGGGTATCGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CCA 72 bp | ACACCTGCTGTCCAGTGCCATTGGGGTCAAAGGCTGTaGTGTGGGTTACCGTGGTATCTGCCGTGCATCGTG | + |
|
Preference number: 6 (lower is better) Translates to: TPAVQCHWGQRL*CGLPWYLPCIV Trigger: CACGATGCACGGCAGATACCACGGTAACCCACACCACAGCCTTTGACCCCAATGGCACTGGACAGCAGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CAA 72 bp | CCATCAGCTGCCCAGAGTCCTCTGAATTGCAGTAGCTaGGTTCATCCTGGGGTCCACTATCCTCGGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSAAQSPLNCSS*VHPGVHYPRGS Trigger: GGAGCCCCGAGGATAGTGGACCCCAGGATGAACCAAGCTACTGCAATTCAGAGGACTCTGGGCAGCTGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
||
| CDS TCA 72 bp | ACCCTCGTAGGAGGCCATCAGCTGCCCAGAGTCCTCTaGATTGCAGTAGCTTGGTTCATCCTGGGGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: TLVGGHQLPRVL*IAVAWFILGST Trigger: AGTGGACCCCAGGATGAACCAAGCTACTGCAATTCAGAGGACTCTGGGCAGCTGATGGCCTCCTACGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
||
| CDS CAA 72 bp | GCTGCGCAGGACATTTGGAAGCTCCAAGGACAGAACTaGCTGGTACACAGTCCGCCCATCTCGACGCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAQDIWKLQGQN*LVHSPPISTQA Trigger: TGCTTGCGTCGAGATGGGCGGACTGTGTACCAGCAAGTTCTGTCCTTGGAGCTTCCAAATGTCCTGCGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CAA 90 bp | CAAGCCAGTGAGAACTCCAAGCAGCACCGGCTTCGAGGTAACAGCTaGCTAGAGACGCATACAGCCCCAGCGATACCCTCTCCTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QASENSKQHRLRGNS*LETHTAPAIPSPFC Trigger: ACAGAAAGGAGAGGGTATCGCTGGGGCTGTATGCGTCTCTAGCAAGCTGTTACCTCGAAGCCGGTGCTGCTTGGAGTTCTCACTGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CAA 90 bp | TTCTCGGCCTCGGCAGAGAATGGAAGCAAACCTCTCCTGGACATCTaGGGCCCCACACAGAACAGCCATCTGAACCATTACAGCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: FSASAENGSKPLLDI*GPTQNSHLNHYSHC Trigger: GCAGTGGCTGTAATGGTTCAGATGGCTGTTCTGTGTGGGGCCCAAGATGTCCAGGAGAGGTTTGCTTCCATTCTCTGCCGAGGCCGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 72 bp | CGTAGGAGGCCATCAGCTGCCCAGAGTCCTCTGAATTaGAGTAGCTTGGTTCATCCTGGGGTCCACTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRRPSAAQSPLN*SSLVHPGVHYP Trigger: AGGATAGTGGACCCCAGGATGAACCAAGCTACTGCAATTCAGAGGACTCTGGGCAGCTGATGGCCTCCTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
||
| CDS GCA 72 bp | CTGCGCAGGACATTTGGAAGCTCCAAGGACAGAACTTaGTGGTACACAGTCCGCCCATCTCGACGCAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LRRTFGSSKDRT*WYTVRPSRRKH Trigger: ATGCTTGCGTCGAGATGGGCGGACTGTGTACCAGCAAGTTCTGTCCTTGGAGCTTCCAAATGTCCTGCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 72 bp | AATGTCATGAGGGATGACGTTCCTCCTTTTCACAGGTaGCACCACTCCACTCATCAGGTACCGTCGCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: NVMRDDVPPFHR*HHSTHQVPSPG Trigger: ACCCGGCGACGGTACCTGATGAGTGGAGTGGTGGCACCTGTGAAAAGGAGGAACGTCATCCCTCATGACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 72 bp | GGGGCCTGTGGTGACCCATGCATCATAGGTCTGGTCTaGGTAGCCTCCATTCTCAATGAGTCCATCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GACGDPCIIGLV*VASILNESILV Trigger: GACCAAGATGGACTCATTGAGAATGGAGGCTACGCAGACCAGACCTATGATGCATGGGTCACCACAGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS GCA 72 bp | GGGAGACTGCTGTCTTGGTCTGCAATGACTGTCTGGTaGTGGTACATTCCAGGGTTGAGCTGCCAACGACAG | + |
|
Preference number: 6 (lower is better) Translates to: GRLLSWSAMTVW*WYIPGLSCQRQ Trigger: CTGTCGTTGGCAGCTCAACCCTGGAATGTACCAGCACCAGACAGTCATTGCAGACCAAGACAGCAGTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130443.2 |
||
| CDS CCA 72 bp | ACCACACAGGCCCCAGTTCCAGCTGCGCAGGACATTTaGAAGCTCCAAGGACAGAACTTGCTGGTACACAGT | + |
|
Preference number: 6 (lower is better) Translates to: TTQAPVPAAQDI*KLQGQNLLVHS Trigger: ACTGTGTACCAGCAAGTTCTGTCCTTGGAGCTTCCAAATGTCCTGCGCAGCTGGAACTGGGGCCTGTGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS CAA 90 bp | AAGCAAAGTAACCACACAGGCCCCAGTTCCAGCTGCGCAGGACATTaGGAAGCTCCAAGGACAGAACTTGCTGGTACACAGTCCGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: KQSNHTGPSSSCAGH*EAPRTELAGTQSAH Trigger: ATGGGCGGACTGTGTACCAGCAAGTTCTGTCCTTGGAGCTTCCAAATGTCCTGCGCAGCTGGAACTGGGGCCTGTGTGGTTACTTTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 72 bp | CAAGGTTCTGTCATCCAGTACTGGGTTCTGCCAGGCTaGGATTCTGTCCTCCCAGTCTGCATAGTGGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QGSVIQYWVLPG*DSVLPVCIVAQ Trigger: CTGTGCCACTATGCAGACTGGGAGGACAGAATCTCAGCCTGGCAGAACCCAGTACTGGATGACAGAACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 72 bp | ATGGCTCATCATCCGGATCCCCAATGTCATGAGGGATaGCGTTCCTCCTTTTCACAGGTGCCACCACTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MAHHPDPQCHEG*RSSFSQVPPLH Trigger: GTGGAGTGGTGGCACCTGTGAAAAGGAGGAACGTCATCCCTCATGACATTGGGGATCCGGATGATGAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
||
| CDS TCA 72 bp | CACATTCAGGCTGTGTGCTTAGTCCCGTGCCTTGTGTaGCTGATGGCCTGCGGCTCTTTTTATGCTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HIQAVCLVPCLV*LMACGSFYAAA Trigger: AGCAGCAGCATAAAAAGAGCCGCAGGCCATCAGTCACACAAGGCACGGGACTAAGCACACAGCCTGAATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CCA 72 bp | CGCAGGACATTTGGAAGCTCCAAGGACAGAACTTGCTaGTACACAGTCCGCCCATCTCGACGCAAGCATACT | + |
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Preference number: 6 (lower is better) Translates to: RRTFGSSKDRTC*YTVRPSRRKHT Trigger: AGTATGCTTGCGTCGAGATGGGCGGACTGTGTACCAGCAAGTTCTGTCCTTGGAGCTTCCAAATGTCCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CCA 72 bp | ACAGGGAGACTGCTGTCTTGGTCTGCAATGACTGTCTaGTGCTGGTACATTCCAGGGTTGAGCTGCCAACGA | + |
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Preference number: 6 (lower is better) Translates to: TGRLLSWSAMTV*CWYIPGLSCQR Trigger: TCGTTGGCAGCTCAACCCTGGAATGTACCAGCACCAGACAGTCATTGCAGACCAAGACAGCAGTCTCCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130443.2 |
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| CDS CAA 90 bp | CCAGTTCCAGCTGCGCAGGACATTTGGAAGCTCCAAGGACAGAACTaGCTGGTACACAGTCCGCCCATCTCGACGCAAGCATACTATAAA | + |
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Preference number: 6 (lower is better) Translates to: PVPAAQDIWKLQGQN*LVHSPPISTQAYYK Trigger: TTTATAGTATGCTTGCGTCGAGATGGGCGGACTGTGTACCAGCAAGTTCTGTCCTTGGAGCTTCCAAATGTCCTGCGCAGCTGGAACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CAA 90 bp | GTGCCTCCATCGGCCAGGAAGTACAGTTCATTGAACAGTGCAGATTaGTACCAGGCAGGCAAGGTTCTGTCATCCAGTACTGGGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: VPPSARKYSSLNSAD*YQAGKVLSSSTGFC Trigger: GCAGAACCCAGTACTGGATGACAGAACCTTGCCTGCCTGGTACAAATCTGCACTGTTCAATGAACTGTACTTCCTGGCCGATGGAGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CAA 90 bp | CATGGCTCCTCCTGCAAAGGCTTGGACGTTGAGTTCAAAGATGGTTaGGAGAGCACGGACCACATGCAGGGTAGGAAATACTTCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: HGSSCKGLDVEFKDG*ESTDHMQGRKYFSV Trigger: GACACTGAAGTATTTCCTACCCTGCATGTGGTCCGTGCTCTCCAAACCATCTTTGAACTCAACGTCCAAGCCTTTGCAGGAGGAGCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS TCA 72 bp | ACACTGTGCCTCCATCGGCCAGGAAGTACAGTTCATTaGACAGTGCAGATTTGTACCAGGCAGGCAAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: TLCLHRPGSTVH*TVQICTRQARF Trigger: GAACCTTGCCTGCCTGGTACAAATCTGCACTGTTCAATGAACTGTACTTCCTGGCCGATGGAGGCACAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS TCA 72 bp | CCTTCCAGTCAGCAGTATCATGAATCAAATATGCGTTaGCCCGGAGCCATGGCTCATCATCCGGATCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: PSSQQYHESNMR*PGAMAHHPDPQ Trigger: TTGGGGATCCGGATGATGAGCCATGGCTCCGGGTCAACGCATATTTGATTCATGATACTGCTGACTGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS GCA 72 bp | GCCTCCATCGGCCAGGAAGTACAGTTCATTGAACAGTaGAGATTTGTACCAGGCAGGCAAGGTTCTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: ASIGQEVQFIEQ*RFVPGRQGSVI Trigger: GATGACAGAACCTTGCCTGCCTGGTACAAATCTGCACTGTTCAATGAACTGTACTTCCTGGCCGATGGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CCA 72 bp | TCCCACACAAAGACTCCTACAGGGAGACTGCTGTCTTaGTCTGCAATGACTGTCTGGTGCTGGTACATTCCA | + |
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Preference number: 6 (lower is better) Translates to: SHTKTPTGRLLS*SAMTVWCWYIP Trigger: TGGAATGTACCAGCACCAGACAGTCATTGCAGACCAAGACAGCAGTCTCCCTGTAGGAGTCTTTGTGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130443.2 |
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| CDS CAA 72 bp | AGCCAGACACACAGGCCACATGTCCTCCAGGAAGCCTaGATCACCCGTCAGGTAATAGTCCCGATAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: SQTHRPHVLQEA*ITRQVIVPINL Trigger: CAAATTTATCGGGACTATTACCTGACGGGTGATCAAGGCTTCCTGGAGGACATGTGGCCTGTGTGTCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CAA 72 bp | ATCCCACACAAAGACTCCTACAGGGAGACTGCTGTCTaGGTCTGCAATGACTGTCTGGTGCTGGTACATTCC | + |
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Preference number: 6 (lower is better) Translates to: IPHKDSYRETAV*VCNDCLVLVHS Trigger: GGAATGTACCAGCACCAGACAGTCATTGCAGACCAAGACAGCAGTCTCCCTGTAGGAGTCTTTGTGTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130443.2 |
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| CDS TCA 72 bp | CATCTTCGCCTCCTAGTCCATTCCGCATGGAGAACGTaGTGGAAACGTCCAGAGTCTCATCTCCTTCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: HLRLLVHSAWRT*WKRPESHLLRF Trigger: AAAACGAAGGAGATGAGACTCTGGACGTTTCCATCACGTTCTCCATGCGGAATGGACTAGGAGGCGAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
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| CDS CAA 72 bp | CACAGTCCGCCCATCTCGACGCAAGCATACTATAAATaGGTCTGCAATGACTGTCTGGTGCTGGTACATTCC | + |
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Preference number: 6 (lower is better) Translates to: HSPPISTQAYYK*VCNDCLVLVHS Trigger: GGAATGTACCAGCACCAGACAGTCATTGCAGACCAATTTATAGTATGCTTGCGTCGAGATGGGCGGACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CAA 72 bp | TCCTGCAAAGGCTTGGACGTTGAGTTCAAAGATGGTTaGGAGAGCACGGACCACATGCAGGGTAGGAAATAC | + |
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Preference number: 6 (lower is better) Translates to: SCKGLDVEFKDG*ESTDHMQGRKY Trigger: GTATTTCCTACCCTGCATGTGGTCCGTGCTCTCCAAACCATCTTTGAACTCAACGTCCAAGCCTTTGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CAA 90 bp | CTCCATCACAGCCAGACACACAGGCCACATGTCCTCCAGGAAGCCTaGATCACCCGTCAGGTAATAGTCCCGATAAATTTGCAATACAAA | + |
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Preference number: 6 (lower is better) Translates to: LHHSQTHRPHVLQEA*ITRQVIVPINLQYK Trigger: TTTGTATTGCAAATTTATCGGGACTATTACCTGACGGGTGATCAAGGCTTCCTGGAGGACATGTGGCCTGTGTGTCTGGCTGTGATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS TCA 72 bp | AACTTCAGGTTCAGGTCCTTCCAGTCAGCAGTATCATaGATCAAATATGCGTTGACCCGGAGCCATGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: NFRFRSFQSAVS*IKYALTRSHGS Trigger: TGAGCCATGGCTCCGGGTCAACGCATATTTGATTCATGATACTGCTGACTGGAAGGACCTGAACCTGAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS GCA 72 bp | AGAGATGTTGTTAGCTTGAAAAGGTCTCCTCTTCTCTaGAAACTCGTGAGCCAAGCAGATCCGCCAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: RDVVSLKRSPLL*KLVSQADPPAK Trigger: TTTGGCTGGCGGATCTGCTTGGCTCACGAGTTTGCAGAGAAGAGGAGACCTTTTCAAGCTAACAACATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
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| CDS GCA 72 bp | AGGACGCATAAAAGTGGACATCGTATGTGTTGTACATaGGGTACTCCTGGCCTTCAAGATAGCCAAATCGCC | + |
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Preference number: 6 (lower is better) Translates to: RTHKSGHRMCCT*GTPGLQDSQIA Trigger: GGCGATTTGGCTATCTTGAAGGCCAGGAGTACCGCATGTACAACACATACGATGTCCACTTTTATGCGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS GCA 72 bp | TTGAGTTCAAAGATGGTTTGGAGAGCACGGACCACATaGAGGGTAGGAAATACTTCAGTGTCTCCTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LSSKMVWRARTT*RVGNTSVSPSP Trigger: GGGAGAAGGAGACACTGAAGTATTTCCTACCCTGCATGTGGTCCGTGCTCTCCAAACCATCTTTGAACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CCA 72 bp | TTGAGCATGTCGATGAAAGGGGTCTTCTTTTCCACGTaGGTCTTTCGGTACCACCACTTCAAGTACCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSMSMKGVFFST*VFRYHHFKYLK Trigger: CTTGAGGTACTTGAAGTGGTGGTACCGAAAGACCCACGTGGAAAAGAAGACCCCTTTCATCGACATGCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030189.14 ENSMUST00000130443.2 |
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| CDS CCA 72 bp | CGCAAGCATACTATAAATTGGTCTGCAATGACTGTCTaGTGCTGGTACATTCCAGGGTTGAGCTGCCAACGA | + |
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Preference number: 6 (lower is better) Translates to: RKHTINWSAMTV*CWYIPGLSCQR Trigger: TCGTTGGCAGCTCAACCCTGGAATGTACCAGCACCAGACAGTCATTGCAGACCAATTTATAGTATGCTTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CCA 72 bp | ACAGTCCGCCCATCTCGACGCAAGCATACTATAAATTaGTCTGCAATGACTGTCTGGTGCTGGTACATTCCA | + |
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Preference number: 6 (lower is better) Translates to: TVRPSRRKHTIN*SAMTVWCWYIP Trigger: TGGAATGTACCAGCACCAGACAGTCATTGCAGACCAATTTATAGTATGCTTGCGTCGAGATGGGCGGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CAA 72 bp | TCGGCCAGGAAGTACAGTTCATTGAACAGTGCAGATTaGTACCAGGCAGGCAAGGTTCTGTCATCCAGTACT | + |
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Preference number: 6 (lower is better) Translates to: SARKYSSLNSAD*YQAGKVLSSST Trigger: AGTACTGGATGACAGAACCTTGCCTGCCTGGTACAAATCTGCACTGTTCAATGAACTGTACTTCCTGGCCGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS CAA 90 bp | CTCCAGGAAGCCTTGATCACCCGTCAGGTAATAGTCCCGATAAATTaGCAATACAAACTTCAGGTTCAGGTCCTTCCAGTCAGCAGTATC | + |
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Preference number: 6 (lower is better) Translates to: LQEALITRQVIVPIN*QYKLQVQVLPVSSI Trigger: GATACTGCTGACTGGAAGGACCTGAACCTGAAGTTTGTATTGCAAATTTATCGGGACTATTACCTGACGGGTGATCAAGGCTTCCTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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| CDS GCA 72 bp | AAGCATACTATAAATTGGTCTGCAATGACTGTCTGGTaGTGGTACATTCCAGGGTTGAGCTGCCAACGACAG | + |
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Preference number: 6 (lower is better) Translates to: KHTINWSAMTVW*WYIPGLSCQRQ Trigger: CTGTCGTTGGCAGCTCAACCCTGGAATGTACCAGCACCAGACAGTCATTGCAGACCAATTTATAGTATGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030189.14 |
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