Pregenerated sensors for GBA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028048Ensembl transcript IDs: ENSMUST00000197738.5
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTaGGGCCCTCCTTCAGGATTCAGGGCAAGGTTCCAGTCCGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: GMSTIMGLSTKLRTQ*GPPSGFRARFQSVH Trigger: ATGGACGGACTGGAACCTTGCCCTGAATCCTGAAGGAGGGCCCAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| 3UTR-3UTR GCA 90 bp | GCGTCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGCATGCTAAGCCCAGGTaGCTGCTCAGGTGTCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: ASLGMSTIMGLSTKLRTQHAKPR*LLRCQF Trigger: GAACTGACACCTGAGCAGGCACCTGGGCTTAGCATG...CTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| 3UTR CAA 90 bp | AATGCGTCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTaGCGGACCCAGTTGGGCCCTCCTTCAGGATTCAGGGCAAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: NASLGMSTIMGLSTK*RTQLGPPSGFRARF Trigger: GAACCTTGCCCTGAATCCTGAAGGAGGGCCCAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGACGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTAATGTCCATGCTAAGCCCAGGTGCCTGCTCAGGTGTCAGTTCCATCACGGGCTGTTTGTAAAATaGGTCTTTGGGGATGTCGAC | + |
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Preference number: 2 (lower is better) Translates to: PFNVHAKPRCLLRCQFHHGLFVK*VFGDVD Trigger: GTCGACATCCCCAAAGACGCATTTTACAAACAGCCC...GTGATGGAACTGACACCTGAGCAGGCACCTGGGCTTAGCATGGACATTAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR TCA 90 bp | GTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGGGCCCTCCTTCCCCCTGGCTGACCCTTaGGCGACCCCTTCCCATTCA | + |
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Preference number: 4 (lower is better) Translates to: VDNNGAIDKVADPVGPSFPLADP*ATPSHS Trigger: TGAATGGGAAGGGGTCGCTCAAGGGTCAGCCAGGGG...GAAGGAGGGCCCAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CCA 90 bp | GCGTCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGCTGTGCCAGTGCGATTaGCCTGGATGGCCCCGACAC | + |
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Preference number: 4 (lower is better) Translates to: ASLGMSTIMGLSTKLRTQLCQCD*PGWPRH Trigger: GTGTCGGGGCCATCCAGGCCAATCGCACTGGCACAG...CTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CCA 90 bp | TCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGGGCCCTCCTTCATGCGATTGGCCTGGATaGCCCCGACACTCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: STIMGLSTKLRTQLGPPSCDWPG*PRHSAP Trigger: TGGAGCTGAGTGTCGGGGCCATCCAGGCCAATCGCA...TGAAGGAGGGCCCAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CCA 90 bp | CCCTCCTTCAGGATTCAGGGCAAGGTTCCAGTCCGTCCATCCAGTTACGTGGTACATCATGGGAACTGTTaGCAAGGGCTGGCCCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: PSFRIQGKVPVRPSSYVVHHGNC*QGLALG Trigger: ACCTAGGGCCAGCCCTTGCCAACAGTTCCCATGATG...TACCACGTAACTGGATGGACGGACTGGAACCTTGCCCTGAATCCTGAAGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR TCA 90 bp | GTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGGGCCCTCCTTCACAAAGCAAGGATGTTaGGCGCAGTGGCGTCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: VDNNGAIDKVADPVGPSFTKQGC*AQWRLS Trigger: TGACAGACGCCACTGCGCTCAACATCCTTGCTTTGT...GAAGGAGGGCCCAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR TCA 90 bp | GCGTCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGCTTGAGCCAAGTGGGTaGTGTCCAGGGACTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: ASLGMSTIMGLSTKLRTQLEPSG*CPGTGK Trigger: TTTGCCAGTCCCTGGACATCACCCACTTGGCTCAAG...CTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| 3UTR CAA 72 bp | ACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTaGGGCCCTCCTTCAGGATTCAGGGCAAGGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TIMGLSTKLRTQ*GPPSGFRARFQ Trigger: CTGGAACCTTGCCCTGAATCCTGAAGGAGGGCCCAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR TCA 90 bp | CCCTTTAATGTCCATGCTAAGCCCAGGTGCCTGCTCAGGTGTCAGTTCCATCACCTGAGTAGCAGCTTCTaGGTAGGTGGGGACAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PFNVHAKPRCLLRCQFHHLSSSF*VGGDKA Trigger: TGCTTTGTCCCCACCTACTCAGAAGCTGCTACTCAG...GTGATGGAACTGACACCTGAGCAGGCACCTGGGCTTAGCATGGACATTAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CCA 90 bp | GCGTCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTGTAGCCAAAGCTTTTaGGGATGCAGGGTTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ASLGMSTIMGLSTKLRTQCSQSF*GCRVGH Trigger: GTGCCCAACCCTGCATCCCCAAAAGCTTTGGCTACA...CTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CCA 90 bp | TCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGGTGAAAGATATCCCCTaGCTGACCCTTGAGCGACCC | + |
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Preference number: 4 (lower is better) Translates to: SLGMSTIMGLSTKLRTQLVKDIP*LTLERP Trigger: GGGTCGCTCAAGGGTCAGCCAGGGGATATCTTTCAC...CAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CCA 90 bp | AGGATTCAGGGCAAGGTTCCAGTCCGTCCATCCAGTTACGTGGTAAAGGAGGTTGTACTTAGCTGCCTCTaGATCAGAGAGCACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: RIQGKVPVRPSSYVVKEVVLSCL*IREHHL Trigger: GAGGTGGTGCTCTCTGATCCAGAGGCAGCTAAGTAC...AACCTCCTTTACCACGTAACTGGATGGACGGACTGGAACCTTGCCCTGAATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR TCA 90 bp | GCGTCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGACAGACACAGACCACTaGGCTGTAGCCAAAGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: ASLGMSTIMGLSTKLRTQTDTDH*AVAKAF Trigger: AAAAGCTTTGGCTACAGCTCAGTGGTCTGTGTCTGT...CTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR TCA 90 bp | TCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGCTCTTCCATTGGTCTTaGGCCAAGTGGGTGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLGMSTIMGLSTKLRTQLLFHWS*AKWVMS Trigger: GGACATCACCCACTTGGCTCAAGACCAATGGAAGAG...CAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CCA 90 bp | TCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGCAGTGGCGTCTGTCATaGCGCCTCCAAATCCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SLGMSTIMGLSTKLRTQLQWRLS*RLQILS Trigger: TGAAAGGATTTGGAGGCGCCATGACAGACGCCACTG...CAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CCA 90 bp | GCGTCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGCAAAGAGCATTGTGTTaGGGAACAAGCGGTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: ASLGMSTIMGLSTKLRTQQRALC*GTSGVS Trigger: AGACACACCGCTTGTTCCCCAACACAATGCTCTTTG...CTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR TCA 90 bp | TCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGGGCCCTCCTTCAAAGCATCCAGAAACTTaGCAAAGTAATTGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: STIMGLSTKLRTQLGPPSKHPET*QSNWPR Trigger: CCTGGGCCAATTACTTTGTCAAGTTTCTGGATGCTT...TGAAGGAGGGCCCAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR GCA 90 bp | TCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGCAAAGCTTTTGGGGATaGAGGGTTGGGCACCATATG | + |
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Preference number: 4 (lower is better) Translates to: SLGMSTIMGLSTKLRTQLQSFWG*RVGHHM Trigger: CATATGGTGCCCAACCCTGCATCCCCAAAAGCTTTG...CAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR GCA 90 bp | TCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGGGCCCTCCTTCAAGAGTCACAGTACGATaGATTACAGACACAGACCAC | + |
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Preference number: 4 (lower is better) Translates to: STIMGLSTKLRTQLGPPSRVTVR*ITDTDH Trigger: GTGGTCTGTGTCTGTAATGCATCGTACTGTGACTCT...TGAAGGAGGGCCCAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR GCA 90 bp | CCCTCCTTCAGGATTCAGGGCAAGGTTCCAGTCCGTCCATCCAGTTACGTGGTAAACTTCTTTTCTGGCTaGAAAGTGAGTAGTAACCCT | + |
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Preference number: 4 (lower is better) Translates to: PSFRIQGKVPVRPSSYVVNFFSG*KVSSNP Trigger: AGGGTTACTACTCACTTTGCAGCCAGAAAAGAAGTT...TACCACGTAACTGGATGGACGGACTGGAACCTTGCCCTGAATCCTGAAGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CAA 90 bp | GCGTCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGACATCATGGGAACTGTaGGCAAGGGCTGGCCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: ASLGMSTIMGLSTKLRTQTSWEL*ARAGPR Trigger: CCTAGGGCCAGCCCTTGCCAACAGTTCCCATGATGT...CTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CAA 90 bp | AATGCGTCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCTCTGTTCCCAGAACTaGGAGCCCACGCAGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: NASLGMSTIMGLSTKLRTLCSQN*EPTQAS Trigger: GGAGGCCTGCGTGGGCTCCAAGTTCTGGGAACAGAG...GGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGACGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CAA 90 bp | CCCTTTAATGTCCATGCTAAGCCCAGGTGCCTGCTCAGGTGTCAGTTCCATCACTTTGGGGATGCAGGGTaGGGCACCATATGCCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: PFNVHAKPRCLLRCQFHHFGDAG*GTICPR Trigger: TCTTGGGCATATGGTGCCCAACCCTGCATCCCCAAA...GTGATGGAACTGACACCTGAGCAGGCACCTGGGCTTAGCATGGACATTAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CAA 90 bp | TCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGGGCCCTCCTTCAGACAAAGCAAGGATGTaGAGCGCAGTGGCGTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: STIMGLSTKLRTQLGPPSDKARM*SAVASV Trigger: GACAGACGCCACTGCGCTCAACATCCTTGCTTTGTC...TGAAGGAGGGCCCAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CAA 90 bp | GATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGGGCCCTCCAGGGGTATCTTGAGCTaGGTGTCTTCTTCTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: DVDNNGAIDKVADPVGPSRGILS*VSSSGR Trigger: CCTCCCAGAAGAAGACACCAAGCTCAAGATACCCCT...GGAGGGCCCAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CAA 90 bp | CCCTCCTTCAGGATTCAGGGCAAGGTTCCAGTCCGTCCATCCAGTTACGTGGTACCATTCACTCTTCCATaGGTCTTGAGCCAAGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: PSFRIQGKVPVRPSSYVVPFTLP*VLSQVG Trigger: ACCCACTTGGCTCAAGACCAATGGAAGAGTGAATGG...TACCACGTAACTGGATGGACGGACTGGAACCTTGCCCTGAATCCTGAAGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CAA 90 bp | TCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACCCAGTTGTCTCCTAAAGTAGCTTaGGCTGGAGCCAGGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: SLGMSTIMGLSTKLRTQLSPKVA*AGARKS Trigger: GGATTTCCTGGCTCCAGCCAAAGCTACTTTAGGAGA...CAACTGGGTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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| CDS-3UTR CAA 90 bp | AAATGCGTCTTTGGGGATGTCGACAATAATGGGGCTATCGACAAAGTTGCGGACACTCTTCCATTGGTCTaGAGCCAAGTGGGTGATGTC | + |
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Preference number: 5 (lower is better) Translates to: KCVFGDVDNNGAIDKVADTLPLV*SQVGDV Trigger: GACATCACCCACTTGGCTCAAGACCAATGGAAGAGT...GTCCGCAACTTTGTCGATAGCCCCATTATTGTCGACATCCCCAAAGACGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197738.5 |
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