Pregenerated sensors for GATM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027199Ensembl transcript IDs: ENSMUST00000028624.9
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCACTACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTaGTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCACACCACGC | + |
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Preference number: 1 (lower is better) Translates to: STTVHAFVKAREGPC*FLGISEAMPQATPR Trigger: GCGTGGTGTGGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGTAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| 3UTR GCA 90 bp | CAAAGCACTACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTaGTGCTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCACACCA | + |
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Preference number: 1 (lower is better) Translates to: QSTTVHAFVKAREGP*CFLGISEAMPQATP Trigger: TGGTGTGGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGTAGTGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| 3UTR GCA 72 bp | GTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTaGTTCTTAGGTATATCTGAGGCTATGCCCCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: VHAFVKAREGPC*FLGISEAMPQA Trigger: GGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| 3UTR GCA 72 bp | ACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTaGTGCTTCTTAGGTATATCTGAGGCTATGCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: TVHAFVKAREGP*CFLGISEAMPQ Trigger: TTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| 3UTR TCA 72 bp | GAAGGAAGGACAGAAGGAAGGATAACCCACTTGAGATaGGGTAAGAGTAAGAGTTTAGTACCAAATGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: EGRTEGRITHLR*GKSKSLVPNVD Trigger: GTCAACATTTGGTACTAAACTCTTACTCTTACCTCATCTCAAGTGGGTTATCCTTCCTTCTGTCCTTCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | GCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCGCTGCCTGGGTGCTCTaGAAAGTTCGCTGCACCCAT | + |
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Preference number: 4 (lower is better) Translates to: AREGPCCFLGISEAMPQAAAWVL*KVRCTH Trigger: ATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGC...GGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR TCA 90 bp | GCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCCCTTCACCTCCACTGTaGATGGTGGCACACAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: AREGPCCFLGISEAMPQAPSPPL*MVAHRH Trigger: ATGCCTGTGTGCCACCATTCACAGTGGAGGTGAAGG...GGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR TCA 90 bp | GCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCGTCACGAACTTTCCCTaGGCGGCCAATTTGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: AREGPCCFLGISEAMPQAVTNFP*AANLCL Trigger: CAGACACAAATTGGCCGCTCAGGGAAAGTTCGTGAC...GGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR GCA 90 bp | AGCACTACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTGCTTCTTAAGTAGGACTGAAGGGTaGCTCGGCGCCGGACGTCGC | + |
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Preference number: 4 (lower is better) Translates to: STTVHAFVKAREGPCCFLSRTEG*LGAGRR Trigger: GCGACGTCCGGCGCCGAGGCACCCTTCAGTCCTACT...TAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGTAGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR GCA 90 bp | GCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCCTCTGGAAAGTTCGCTaGACCCATCCTGTTAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: AREGPCCFLGISEAMPQALWKVR*THPVKD Trigger: ATCCTTAACAGGATGGGTGCAGCGAACTTTCCAGAG...GGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | GCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCATGTACTCTGTAGTCTaGAGCAAGATGCCTACGCAT | + |
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Preference number: 4 (lower is better) Translates to: AREGPCCFLGISEAMPQAMYSVV*SKMPTH Trigger: ATGCGTAGGCATCTTGCTCCAGACTACAGAGTACAT...GGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR GCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTCCTCGGCACCTCGGCTaGCTCCGCGCAGACACCGCA | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTPRHLG*LRADTA Trigger: TGCGGTGTCTGCGCGGAGGCAGCCGAGGTGCCGAGG...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR GCA 90 bp | GCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCAACCTGGCTTCTCTGTaGAAAAATATCTCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AREGPCCFLGISEAMPQANLASL*KNISSS Trigger: GCTGGAAGAGATATTTTTGCACAGAGAAGCCAGGTT...GGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR TCA 90 bp | ACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATAGACATCCAGAGGGGATaGTCATCGGGGATGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: TVHAFVKAREGPCCFLGIDIQRG*SSGMTG Trigger: ACCAGTCATCCCCGATGATCATCCCCTCTGGATGTC...TATACCTAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR GCA 90 bp | ACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATACATTGTGGGCTTGGGTaGTGTTGTCCACTTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: TVHAFVKAREGPCCFLGIHCGLG*CCPLGT Trigger: GGTGCCAAGTGGACAACAGCACCCAAGCCCACAATG...TATACCTAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | ACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATAGTTCGTCAGCCATTGTaGGCTTGGGTGCTGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TVHAFVKAREGPCCFLGIVRQPL*AWVLLS Trigger: GGACAACAGCACCCAAGCCCACAATGGCTGACGAAC...TATACCTAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR TCA 90 bp | CCTGTTAAGGATGTGATTGTTCAAAGCACTACAGTTCATGCATTTGTTAAAGCGGTACTCAAAGAAGCGTaGGCGCCATGCCATGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PVKDVIVQSTTVHAFVKAVLKEA*APCHGC Trigger: GCACCCATGGCATGGCGCTCACGCTTCTTTGAGTAC...CGCTTTAACAAATGCATGAACTGTAGTGCTTTGAACAATCACATCCTTAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | CCTGTTAAGGATGTGATTGTTCAAAGCACTACAGTTCATGCATTTGTTAAAGCGTGGGCAGAGGATGGGTaGCCTTGTCTTCAGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PVKDVIVQSTTVHAFVKAWAEDG*PCLQLH Trigger: GTGCAGCTGAAGACAAGGCCACCCATCCTCTGCCCA...CGCTTTAACAAATGCATGAACTGTAGTGCTTTGAACAATCACATCCTTAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR GCA 90 bp | AGCACTACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTGCTTCTTAGATGTCTCGAGGCATTaGGCTGTACAAACCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: STTVHAFVKAREGPCCFLDVSRH*AVQTCR Trigger: TCTACAGGTTTGTACAGCGCAATGCCTCGAGACATC...TAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGTAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTAGACAGGGCAGTCCTTaGGCAGAGGATGGGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTRQGSP*AEDGWP Trigger: AGGCCACCCATCCTCTGCCCAAGGACTGCCCTGTCT...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | CCTGTTAAGGATGTGATTGTTCAAAGCACTACAGTTCATGCATTTGTTAAAGCGCAGCCATTGTGGGCTTaGGTGCTGTTGTCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: PVKDVIVQSTTVHAFVKAQPLWA*VLLSTW Trigger: CCAAGTGGACAACAGCACCCAAGCCCACAATGGCTG...CGCTTTAACAAATGCATGAACTGTAGTGCTTTGAACAATCACATCCTTAACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR TCA 90 bp | CCTGTTAAGGATGTGATTGTTCAAAGCACTACAGTTCATGCATTTGTTAAAGCGCTCTTCCAGCTCGAATaGAGTCAGCAGCATCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PVKDVIVQSTTVHAFVKALFQLE*SQQHQS Trigger: GCTTTGATGCTGCTGACTTCATTCGAGCTGGAAGAG...CGCTTTAACAAATGCATGAACTGTAGTGCTTTGAACAATCACATCCTTAACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR GCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTGGAGGAAGCTGTAGCTaGCTGGGTGCTCTGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTGGSCS*LGALES Trigger: ACTTTCCAGAGCACCCAGGCAGCTACAGCTTCCTCC...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTGAAGCTGTAGCTGCCTaGGTGCTCTGGAAAGTTCGC | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTEAVAA*VLWKVR Trigger: GCGAACTTTCCAGAGCACCCAGGCAGCTACAGCTTC...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | CCTGTTAAGGATGTGATTGTTCAAAGCACTACAGTTCATGCATTTGTTAAAGCGGTGCTGTTGTCCACTTaGCACCACGATGGAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PVKDVIVQSTTVHAFVKAVLLST*HHDGSS Trigger: ACTACTTCCATCGTGGTGCCAAGTGGACAACAGCAC...CGCTTTAACAAATGCATGAACTGTAGTGCTTTGAACAATCACATCCTTAACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | ACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCATGGAAAGCCATTTaGATGACATCCAGAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: TVHAFVKAREGPCCFLGISWKAI*MTSRGD Trigger: ATCCCCTCTGGATGTCATCCAAATGGCTTTCCATGA...TATACCTAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR TCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTAGTCTTATACTTGAGTaGCCAGTCGATGGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTSLILE*PVDGVR Trigger: CCTGACCCCATCGACTGGTCACTCAAGTATAAGACT...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR TCA 90 bp | CCTGTTAAGGATGTGATTGTTCAAAGCACTACAGTTCATGCATTTGTTAAAGCGGTAGTCTTTGATAATTaGCCTGTACGCTCGGTACTC | + |
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Preference number: 4 (lower is better) Translates to: PVKDVIVQSTTVHAFVKAVVFDN*PVRSVL Trigger: GAGTACCGAGCGTACAGGTCAATTATCAAAGACTAC...CGCTTTAACAAATGCATGAACTGTAGTGCTTTGAACAATCACATCCTTAACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR TCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTGGAAAGCCATTTGGATaGCATCCAGAGGGGATGATC | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTGKPFG*HPEGMI Trigger: GATCATCCCCTCTGGATGTCATCCAAATGGCTTTCC...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTCACCTCCACTGTGAATaGTGGCACACAGGCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTHLHCE*WHTGIF Trigger: GAAAATGCCTGTGTGCCACCATTCACAGTGGAGGTG...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTGGGGATGACTGGTGTTaGAGGAGTAACTATGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTGDDWC*RSNYGP Trigger: TGGACCATAGTTACTCCTCCAACACCAGTCATCCCC...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR GCA 90 bp | ACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATACCATTGATAAAATATTaGACATCTCTTCGACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TVHAFVKAREGPCCFLGIPLIKY*TSLRPQ Trigger: CTGAGGTCGAAGAGATGTGCAATATTTTATCAATGG...TATACCTAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | ACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCTTCAGATGATCTTTaGGAAAATAAAGACCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TVHAFVKAREGPCCFLGISSDDL*ENKDLH Trigger: ATGGAGGTCTTTATTTTCCCAAAGATCATCTGAAGA...TATACCTAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTATCATCGGGGATGACTaGTGTTGGAGGAGTAACTAT | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTIIGDD*CWRSNY Trigger: ATAGTTACTCCTCCAACACCAGTCATCCCCGATGAT...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | CCTGTTAAGGATGTGATTGTTCAAAGCACTACAGTTCATGCATTTGTTAAAGCGGCATTAAGACGTTCATaGAAAGCCATTTGGATGACA | + |
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Preference number: 4 (lower is better) Translates to: PVKDVIVQSTTVHAFVKAALRRS*KAIWMT Trigger: TGTCATCCAAATGGCTTTCCATGAACGTCTTAATGC...CGCTTTAACAAATGCATGAACTGTAGTGCTTTGAACAATCACATCCTTAACAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTGAATTGGAACTTCATTaGCATCTACCATCACGCGCT | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTELELH*HLPSRA Trigger: AGCGCGTGATGGTAGATGCCAATGAAGTTCCAATTC...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR TCA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTTCCATCCTGCTTTCTTaGAAAGATCAATCTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: IKNRGRWLNISGQVTQVTSILLS*KDQSDD Trigger: GTCATCAGATTGATCTTTTCAAGAAAGCAGGATGGA...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR GCA 90 bp | CCTGTTAAGGATGTGATTGTTCAAAGCACTACAGTTCATGCATTTGTTAAAGCGAACTATGGTCCATCCTaGTTTCTTGAAAAGATCAAT | + |
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Preference number: 4 (lower is better) Translates to: PVKDVIVQSTTVHAFVKANYGPS*FLEKIN Trigger: ATTGATCTTTTCAAGAAAGCAGGATGGACCATAGTT...CGCTTTAACAAATGCATGAACTGTAGTGCTTTGAACAATCACATCCTTAACAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CAA 90 bp | GCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCTGGGCTTGGGTGCTGTaGTCCACTTGGCACCACGAT | + |
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Preference number: 5 (lower is better) Translates to: AREGPCCFLGISEAMPQAWAWVL*STWHHD Trigger: ATCGTGGTGCCAAGTGGACAACAGCACCCAAGCCCA...GGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CAA 90 bp | GCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCAGAGGATGGGTGGCCTaGTCTTCAGCTGCACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: AREGPCCFLGISEAMPQARGWVA*SSAAQE Trigger: TTCCTGTGCAGCTGAAGACAAGGCCACCCATCCTCT...GGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CCA 90 bp | CCTCTAAAGGGTCCCATTCGTTGTAAGAGGAGACAGGGCAGTCCTTaGGCAGAGGATGGGTGGCCTTGTCTTCAGCTGCACAGGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: PLKGPIRCKRRQGSP*AEDGWPCLQLHRNF Trigger: GAAATTCCTGTGCAGCTGAAGACAAGGCCACCCATCCTCTGCCCAAGGACTGCCCTGTCTCCTCTTACAACGAATGGGACCCTTTAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CCA 90 bp | TTGTCTTCAGCTGCACAGGAATTTCGGGAGGAAGCTGTAGCTGCCTaGGTGCTCTGGAAAGTTCGCTGCACCCATCCTGTTAAGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: LSSAAQEFREEAVAA*VLWKVRCTHPVKDP Trigger: AGGATCCTTAACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACAGCTTCCTCCCGAAATTCCTGTGCAGCTGAAGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS TCA 90 bp | GCTGTACAAACCTGTAGACTCAAAATCAGGAGTCTTATACTTGAGTaGCCAGTCGATGGGGTCAGGCCGCCTCACGGTCACTCCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: AVQTCRLKIRSLILE*PVDGVRPPHGHSFH Trigger: ATGGAAGGAGTGACCGTGAGGCGGCCTGACCCCATCGACTGGTCACTCAAGTATAAGACTCCTGATTTTGAGTCTACAGGTTTGTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS GCA 90 bp | TGGGGTCAGGCCGCCTCACGGTCACTCCTTCCATTGATAAAATATTaGACATCTCTTCGACCTCAGCAACAGCCTTCTTCAGATGATCTT | + |
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Preference number: 5 (lower is better) Translates to: WGQAASRSLLPLIKY*TSLRPQQQPSSDDL Trigger: AAGATCATCTGAAGAAGGCTGTTGCTGAGGTCGAAGAGATGTGCAATATTTTATCAATGGAAGGAGTGACCGTGAGGCGGCCTGACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CCA 90 bp | TGGCATCTACCATCACGCGCTTCTCATCTAGCATTAAGACGTTCATaGAAAGCCATTTGGATGACATCCAGAGGGGATGATCATCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: WHLPSRASHLALRRS*KAIWMTSRGDDHRG Trigger: TCCCCGATGATCATCCCCTCTGGATGTCATCCAAATGGCTTTCCATGAACGTCTTAATGCTAGATGAGAAGCGCGTGATGGTAGATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS GCA 90 bp | GGGATAATTCTGGTCATACAGTTCGTCAGCCATTGTGGGCTTGGGTaGTGTTGTCCACTTGGCACCACGATGGAAGTAGTCTTTGATAAT | + |
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Preference number: 5 (lower is better) Translates to: GIILVIQFVSHCGLG*CCPLGTTMEVVFDN Trigger: ATTATCAAAGACTACTTCCATCGTGGTGCCAAGTGGACAACAGCACCCAAGCCCACAATGGCTGACGAACTGTATGACCAGAATTATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CAA 90 bp | GCGAGAGAAGGGCCTTGCTGCTTCTTAGGTATATCTGAGGCTATGCCCCAAGCCTCCATTGATAAAATATaGCACATCTCTTCGACCTCA | + |
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Preference number: 5 (lower is better) Translates to: AREGPCCFLGISEAMPQASIDKI*HISSTS Trigger: TGAGGTCGAAGAGATGTGCAATATTTTATCAATGGA...GGCTTGGGGCATAGCCTCAGATATACCTAAGAAGCAGCAAGGCCCTTCTCTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CAA 90 bp | AGCACTACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTGCTTCTTACCAGGTCCAATGATGTaGAAGGTGGCATCGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: STTVHAFVKAREGPCCFLPGPMM*KVASMC Trigger: GCACATCGATGCCACCTTCAACATCATTGGACCTGG...TAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGTAGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CAA 90 bp | CCTGTTAAGGATGTGATTGTTCAAAGCACTACAGTTCATGCATTTGTTAAAGCGCCTCCTCCCAGGGAATaGGCATTTCGAATGTTAACC | + |
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Preference number: 5 (lower is better) Translates to: PVKDVIVQSTTVHAFVKAPPPRE*AFRMLT Trigger: GGTTAACATTCGAAATGCCAATTCCCTGGGAGGAGG...CGCTTTAACAAATGCATGAACTGTAGTGCTTTGAACAATCACATCCTTAACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CAA 90 bp | AGCACTACAGTTCATGCATTTGTTAAAGCGAGAGAAGGGCCTTGCTGCTTCTTACGGTCACTCCTTCCATaGATAAAATATTGCACATCT | + |
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Preference number: 5 (lower is better) Translates to: STTVHAFVKAREGPCCFLRSLLP*IKYCTS Trigger: AGATGTGCAATATTTTATCAATGGAAGGAGTGACCG...TAAGAAGCAGCAAGGCCCTTCTCTCGCTTTAACAAATGCATGAACTGTAGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS TCA 90 bp | ATGTTAACCTTAATGGTACTGATACCCAGCTTCTCAAACATCTTTTaGATTGGAACTTCATTGGCATCTACCATCACGCGCTTCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: MLTLMVLIPSFSNIF*IGTSLASTITRFSS Trigger: AGATGAGAAGCGCGTGATGGTAGATGCCAATGAAGTTCCAATTCAAAAGATGTTTGAGAAGCTGGGTATCAGTACCATTAAGGTTAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CAA 90 bp | ATTAAAAACAGAGGTAGATGGTTAAATATTAGCGGCCAAGTTACTCAAGTGACTTTCATGGAAAGCCATTaGGATGACATCCAGAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: IKNRGRWLNISGQVTQVTFMESH*DDIQRG Trigger: TCCCCTCTGGATGTCATCCAAATGGCTTTCCATGAA...AGTCACTTGAGTAACTTGGCCGCTAATATTTAACCATCTACCTCTGTTTTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS-3UTR CAA 90 bp | CCTGTTAAGGATGTGATTGTTCAAAGCACTACAGTTCATGCATTTGTTAAAGCGCTTCTCAAACATCTTTaGAATTGGAACTTCATTGGC | + |
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Preference number: 5 (lower is better) Translates to: PVKDVIVQSTTVHAFVKALLKHL*NWNFIG Trigger: GCCAATGAAGTTCCAATTCAAAAGATGTTTGAGAAG...CGCTTTAACAAATGCATGAACTGTAGTGCTTTGAACAATCACATCCTTAACAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS GCA 72 bp | GTCCTTGGGCAGAGGATGGGTGGCCTTGTCTTCAGCTaGACAGGAATTTCGGGAGGAAGCTGTAGCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VLGQRMGGLVFS*TGISGGSCSCL Trigger: CAGGCAGCTACAGCTTCCTCCCGAAATTCCTGTGCAGCTGAAGACAAGGCCACCCATCCTCTGCCCAAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 72 bp | GAGACAGGGCAGTCCTTGGGCAGAGGATGGGTGGCCTaGTCTTCAGCTGCACAGGAATTTCGGGAGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: ETGQSLGRGWVA*SSAAQEFREEA Trigger: AGCTTCCTCCCGAAATTCCTGTGCAGCTGAAGACAAGGCCACCCATCCTCTGCCCAAGGACTGCCCTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS GCA 72 bp | GAAGCTGTAGCTGCCTGGGTGCTCTGGAAAGTTCGCTaGACCCATCCTGTTAAGGATCCTCCAAGCCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: EAVAAWVLWKVR*THPVKDPPSRE Trigger: CTCTCGGCTTGGAGGATCCTTAACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACAGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS GCA 72 bp | TTCAGCTGCACAGGAATTTCGGGAGGAAGCTGTAGCTaGCTGGGTGCTCTGGAAAGTTCGCTGCACCCATCC | + |
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Preference number: 6 (lower is better) Translates to: FSCTGISGGSCS*LGALESSLHPS Trigger: GGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACAGCTTCCTCCCGAAATTCCTGTGCAGCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CCA 72 bp | GCTGCACAGGAATTTCGGGAGGAAGCTGTAGCTGCCTaGGTGCTCTGGAAAGTTCGCTGCACCCATCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: AAQEFREEAVAA*VLWKVRCTHPV Trigger: AACAGGATGGGTGCAGCGAACTTTCCAGAGCACCCAGGCAGCTACAGCTTCCTCCCGAAATTCCTGTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS TCA 72 bp | ACCTGTAGACTCAAAATCAGGAGTCTTATACTTGAGTaGCCAGTCGATGGGGTCAGGCCGCCTCACGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: TCRLKIRSLILE*PVDGVRPPHGH Trigger: GTGACCGTGAGGCGGCCTGACCCCATCGACTGGTCACTCAAGTATAAGACTCCTGATTTTGAGTCTACAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 72 bp | GGATGGGATAATTCTGGTCATACAGTTCGTCAGCCATaGTGGGCTTGGGTGCTGTTGTCCACTTGGCACCAC | + |
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Preference number: 6 (lower is better) Translates to: GWDNSGHTVRQP*WAWVLLSTWHH Trigger: GTGGTGCCAAGTGGACAACAGCACCCAAGCCCACAATGGCTGACGAACTGTATGACCAGAATTATCCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 72 bp | TCGGGGTTGGAGAGCACAAGACCAGGTCCAATGATGTaGAAGGTGGCATCGATGTGCATTGGATTGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SGLESTRPGPMM*KVASMCIGLGS Trigger: AGACCCCAATCCAATGCACATCGATGCCACCTTCAACATCATTGGACCTGGTCTTGTGCTCTCCAACCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 90 bp | GTGACCAGTCGATGGGGTCAGGCCGCCTCACGGTCACTCCTTCCATaGATAAAATATTGCACATCTCTTCGACCTCAGCAACAGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VTSRWGQAASRSLLP*IKYCTSLRPQQQPS Trigger: AGAAGGCTGTTGCTGAGGTCGAAGAGATGTGCAATATTTTATCAATGGAAGGAGTGACCGTGAGGCGGCCTGACCCCATCGACTGGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 90 bp | CCACGGAATGGATGGGATAATTCTGGTCATACAGTTCGTCAGCCATaGTGGGCTTGGGTGCTGTTGTCCACTTGGCACCACGATGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: PRNGWDNSGHTVRQP*WAWVLLSTWHHDGS Trigger: ACTTCCATCGTGGTGCCAAGTGGACAACAGCACCCAAGCCCACAATGGCTGACGAACTGTATGACCAGAATTATCCCATCCATTCCGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 90 bp | ATTGCGCTGTACAAACCTGTAGACTCAAAATCAGGAGTCTTATACTaGAGTGACCAGTCGATGGGGTCAGGCCGCCTCACGGTCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: IALYKPVDSKSGVLY*SDQSMGSGRLTVTP Trigger: AGGAGTGACCGTGAGGCGGCCTGACCCCATCGACTGGTCACTCAAGTATAAGACTCCTGATTTTGAGTCTACAGGTTTGTACAGCGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS TCA 72 bp | AAGCAAGGCTCAAACTCAGTCGTCACGAACTTTCCCTaGGCGGCCAATTTGTGTCTGTCTTCCACGGAATGG | + |
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Preference number: 6 (lower is better) Translates to: KQGSNSVVTNFP*AANLCLSSTEW Trigger: CCATTCCGTGGAAGACAGACACAAATTGGCCGCTCAGGGAAAGTTCGTGACGACTGAGTTTGAGCCTTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CCA 72 bp | AATTCTGGTCATACAGTTCGTCAGCCATTGTGGGCTTaGGTGCTGTTGTCCACTTGGCACCACGATGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: NSGHTVRQPLWA*VLLSTWHHDGS Trigger: ACTTCCATCGTGGTGCCAAGTGGACAACAGCACCCAAGCCCACAATGGCTGACGAACTGTATGACCAGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 72 bp | CGATGGGGTCAGGCCGCCTCACGGTCACTCCTTCCATaGATAAAATATTGCACATCTCTTCGACCTCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: RWGQAASRSLLP*IKYCTSLRPQQ Trigger: TTGCTGAGGTCGAAGAGATGTGCAATATTTTATCAATGGAAGGAGTGACCGTGAGGCGGCCTGACCCCATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 72 bp | GGCCGCCTCACGGTCACTCCTTCCATTGATAAAATATaGCACATCTCTTCGACCTCAGCAACAGCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GRLTVTPSIDKI*HISSTSATAFF Trigger: GAAGAAGGCTGTTGCTGAGGTCGAAGAGATGTGCAATATTTTATCAATGGAAGGAGTGACCGTGAGGCGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 72 bp | TACAAACCTGTAGACTCAAAATCAGGAGTCTTATACTaGAGTGACCAGTCGATGGGGTCAGGCCGCCTCACG | + |
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Preference number: 6 (lower is better) Translates to: YKPVDSKSGVLY*SDQSMGSGRLT Trigger: CGTGAGGCGGCCTGACCCCATCGACTGGTCACTCAAGTATAAGACTCCTGATTTTGAGTCTACAGGTTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS GCA 72 bp | GCCGCCTCACGGTCACTCCTTCCATTGATAAAATATTaGACATCTCTTCGACCTCAGCAACAGCCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: AASRSLLPLIKY*TSLRPQQQPSS Trigger: TGAAGAAGGCTGTTGCTGAGGTCGAAGAGATGTGCAATATTTTATCAATGGAAGGAGTGACCGTGAGGCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS GCA 72 bp | CTCGTTTCCCACAACCATCAGGATGTCTCGAGGCATTaGGCTGTACAAACCTGTAGACTCAAAATCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LVSHNHQDVSRH*AVQTCRLKIRS Trigger: ACTCCTGATTTTGAGTCTACAGGTTTGTACAGCGCAATGCCTCGAGACATCCTGATGGTTGTGGGAAACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CCA 72 bp | GAGCGGCCAATTTGTGTCTGTCTTCCACGGAATGGATaGGATAATTCTGGTCATACAGTTCGTCAGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: ERPICVCLPRNG*DNSGHTVRQPL Trigger: CAATGGCTGACGAACTGTATGACCAGAATTATCCCATCCATTCCGTGGAAGACAGACACAAATTGGCCGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS TCA 72 bp | AGTACTTTTCATATGTATTGGCCTTCACCTCCACTGTaGATGGTGGCACACAGGCATTTTCAGCTCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: STFHMYWPSPPL*MVAHRHFQLCP Trigger: TGGGCAGAGCTGAAAATGCCTGTGTGCCACCATTCACAGTGGAGGTGAAGGCCAATACATATGAAAAGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS GCA 72 bp | GATGACTGGTGTTGGAGGAGTAACTATGGTCCATCCTaGTTTCTTGAAAAGATCAATCTGATGACAGGGACG | + |
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Preference number: 6 (lower is better) Translates to: DDWCWRSNYGPS*FLEKINLMTGT Trigger: CGTCCCTGTCATCAGATTGATCTTTTCAAGAAAGCAGGATGGACCATAGTTACTCCTCCAACACCAGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CCA 72 bp | GGTACTGATACCCAGCTTCTCAAACATCTTTTGAATTaGAACTTCATTGGCATCTACCATCACGCGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GTDTQLLKHLLN*NFIGIYHHALL Trigger: GAGAAGCGCGTGATGGTAGATGCCAATGAAGTTCCAATTCAAAAGATGTTTGAGAAGCTGGGTATCAGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS GCA 72 bp | AGACCAGGTCCAATGATGTTGAAGGTGGCATCGATGTaGATTGGATTGGGGTCTTTAAAAGAGATGATATGT | + |
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Preference number: 6 (lower is better) Translates to: RPGPMMLKVASM*IGLGSLKEMIC Trigger: ACATATCATCTCTTTTAAAGACCCCAATCCAATGCACATCGATGCCACCTTCAACATCATTGGACCTGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS TCA 72 bp | TTAATGGTACTGATACCCAGCTTCTCAAACATCTTTTaGATTGGAACTTCATTGGCATCTACCATCACGCGC | + |
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Preference number: 6 (lower is better) Translates to: LMVLIPSFSNIF*IGTSLASTITR Trigger: GCGCGTGATGGTAGATGCCAATGAAGTTCCAATTCAAAAGATGTTTGAGAAGCTGGGTATCAGTACCATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CCA 72 bp | AGGTCCAATGATGTTGAAGGTGGCATCGATGTGCATTaGATTGGGGTCTTTAAAAGAGATGATATGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: RSNDVEGGIDVH*IGVFKRDDMYS Trigger: AGAGTACATATCATCTCTTTTAAAGACCCCAATCCAATGCACATCGATGCCACCTTCAACATCATTGGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 72 bp | CTTAATGGTACTGATACCCAGCTTCTCAAACATCTTTaGAATTGGAACTTCATTGGCATCTACCATCACGCG | + |
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Preference number: 6 (lower is better) Translates to: LNGTDTQLLKHL*NWNFIGIYHHA Trigger: CGCGTGATGGTAGATGCCAATGAAGTTCCAATTCAAAAGATGTTTGAGAAGCTGGGTATCAGTACCATTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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| CDS CAA 90 bp | AATGTTAACCTTAATGGTACTGATACCCAGCTTCTCAAACATCTTTaGAATTGGAACTTCATTGGCATCTACCATCACGCGCTTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: NVNLNGTDTQLLKHL*NWNFIGIYHHALLI Trigger: GATGAGAAGCGCGTGATGGTAGATGCCAATGAAGTTCCAATTCAAAAGATGTTTGAGAAGCTGGGTATCAGTACCATTAAGGTTAACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028624.9 |
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