Pregenerated sensors for GATD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051007Ensembl transcript IDs: ENSMUST00000106008.3
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGCCGGTGGATCTCTGAGGTCCAGGCCAGCCTGGTCTACAGAGTaGGTTTTAGGACAGGCAAGGCCACAGAGAAACCCTGTCTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: EAGGSLRSRPAWSTE*VLGQARPQRNPVSK Trigger: TTTTGAGACAGGGTTTCTCTGTGGCCTTGCCTGTCCTAAAACTCACTCTGTAGACCAGGCTGGCCTGGACCTCAGAGATCCACCGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR GCA 90 bp | GTGGGCAATTCTTCTTGGAATCGTCAATCTGGAGTTCTCAGGGACTaGCTGGCCAGCCAAGACACTGTGCTGGGATGGAGGAAAGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: VGNSSWNRQSGVLRD*LASQDTVLGWRKGC Trigger: GCACCCTTTCCTCCATCCCAGCACAGTGTCTTGGCTGGCCAGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAGAATTGCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR CCA 90 bp | CAGCTGACTACATCCCGTGGGCAATTCTTCTTGGAATCGTCAATCTaGAGTTCTCAGGGACTGCCTGGCCAGCCAAGACACTGTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: QLTTSRGQFFLESSI*SSQGLPGQPRHCAG Trigger: CCCAGCACAGTGTCTTGGCTGGCCAGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAGAATTGCCCACGGGATGTAGTCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR TCA 90 bp | AATCCCTGGAGGCTTCCAGCATTCCACAAGGTCCTGATGGAGGCTTaGGTGTCCCATCGAGTGTCAGTACAGGAGACCATGGTGAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: NPWRLPAFHKVLMEA*VSHRVSVQETMVSS Trigger: TGAACTCACCATGGTCTCCTGTACTGACACTCGATGGGACACTCAAGCCTCCATCAGGACCTTGTGGAATGCTGGAAGCCTCCAGGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR GCA 90 bp | GATAGGGGAGGCTGGAGAGATGGCTCAATGGTTAAGAGCACTGACTaGTCTTCCAGAAGACCTGGGTTCAATTTTGAGCACCCAAGCGGC | + |
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Preference number: 1 (lower is better) Translates to: DRGGWRDGSMVKSTD*SSRRPGFNFEHPSG Trigger: GCCGCTTGGGTGCTCAAAATTGAACCCAGGTCTTCTGGAAGAGCAGTCAGTGCTCTTAACCATTGAGCCATCTCTCCAGCCTCCCCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR GCA 90 bp | GACTGCCTGGCCAGCCAAGACACTGTGCTGGGATGGAGGAAAGGGTaGCTAGTCTACATTAGGACTGACAGTCCACAAGTATTAATCCCT | + |
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Preference number: 1 (lower is better) Translates to: DCLASQDTVLGWRKG*LVYIRTDSPQVLIP Trigger: AGGGATTAATACTTGTGGACTGTCAGTCCTAATGTAGACTAGGCACCCTTTCCTCCATCCCAGCACAGTGTCTTGGCTGGCCAGGCAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR CCA 90 bp | AAAAAGGAAAGACGAGAAAGGAAGTTCATAGCAAGCTCCAGCCTGTaGTCCATCCACACGATTCCCATGAACAGTGGAAGGGACAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: KKERRERKFIASSSL*SIHTIPMNSGRDRN Trigger: ATTTCTGTCCCTTCCACTGTTCATGGGAATCGTGTGGATGGACCACAGGCTGGAGCTTGCTATGAACTTCCTTTCTCGTCTTTCCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR-3UTR TCA 90 bp | GAGTTCTCAGGGACTGCCTGGCCAGCCAAGACACTGTGCTGGGATGGAGGAAAGCATTCCACAAGGTCCTaGTGGAGGCTTGAGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: EFSGTAWPAKTLCWDGGKHSTRS*WRLECP Trigger: GGGACACTCAAGCCTCCATCAGGACCTTGTGGAATG...CTTTCCTCCATCCCAGCACAGTGTCTTGGCTGGCCAGGCAGTCCCTGAGAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCCAGCCTGTGGTCCATCCACACGATTCCCATGAACAGTGGAAGGGACAGCTGAGACCCCACAGCTaGCTACATCCCGTGGGCAAT | + |
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Preference number: 2 (lower is better) Translates to: KLQPVVHPHDSHEQWKGQLRPHS*LHPVGN Trigger: ATTGCCCACGGGATGTAGTCAGCTGTGGGGTCTCAG...CTGTCCCTTCCACTGTTCATGGGAATCGTGTGGATGGACCACAGGCTGGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR-3UTR GCA 90 bp | GGGATAGGGGAGGCTGGAGAGATGGCTCAATGGTTAAGAGCACTGACTGCTCTTCCAGCCAAGACACTGTaGTGGGATGGAGGAAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GIGEAGEMAQWLRALTALPAKTL*WDGGKG Trigger: ACCCTTTCCTCCATCCCAGCACAGTGTCTTGGCTGG...AAGAGCAGTCAGTGCTCTTAACCATTGAGCCATCTCTCCAGCCTCCCCTATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR-3UTR CCA 90 bp | CGGCAGCTCACAACTGTCTGTACCTCTAGTTCCAGGGTATCCAACACCCTCATATTCTCAGGGACTGCCTaGCCAGCCAAGACACTGTGC | + |
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Preference number: 2 (lower is better) Translates to: RQLTTVCTSSSRVSNTLIFSGTA*PAKTLC Trigger: GCACAGTGTCTTGGCTGGCCAGGCAGTCCCTGAGAA...TATGAGGGTGTTGGATACCCTGGAACTAGAGGTACAGACAGTTGTGAGCTGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR TCA 72 bp | GAGTGTCCCATCGAGTGTCAGTACAGGAGACCATGGTaGGTTCAGTCCTTGTCTCTAGGCCACCAGGACTGC | + |
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Preference number: 3 (lower is better) Translates to: ECPIECQYRRPW*VQSLSLGHQDC Trigger: GCAGTCCTGGTGGCCTAGAGACAAGGACTGAACTCACCATGGTCTCCTGTACTGACACTCGATGGGACACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR TCA 72 bp | GGATCTCTGAGGTCCAGGCCAGCCTGGTCTACAGAGTaGGTTTTAGGACAGGCAAGGCCACAGAGAAACCCT | + |
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Preference number: 3 (lower is better) Translates to: GSLRSRPAWSTE*VLGQARPQRNP Trigger: AGGGTTTCTCTGTGGCCTTGCCTGTCCTAAAACTCACTCTGTAGACCAGGCTGGCCTGGACCTCAGAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR GCA 72 bp | TCTTCTTGGAATCGTCAATCTGGAGTTCTCAGGGACTaGCTGGCCAGCCAAGACACTGTGCTGGGATGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SSWNRQSGVLRD*LASQDTVLGWR Trigger: CCTCCATCCCAGCACAGTGTCTTGGCTGGCCAGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR CCA 72 bp | CTTGGAATCGTCAATCTGGAGTTCTCAGGGACTGCCTaGCCAGCCAAGACACTGTGCTGGGATGGAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: LGIVNLEFSGTA*PAKTLCWDGGK Trigger: CTTTCCTCCATCCCAGCACAGTGTCTTGGCTGGCCAGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR TCA 72 bp | CAAGCTCCAGCCTGTGGTCCATCCACACGATTCCCATaGACAGTGGAAGGGACAGAAATAGCCGAAAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: QAPACGPSTRFP*TVEGTEIAESP Trigger: TGGGCTTTCGGCTATTTCTGTCCCTTCCACTGTTCATGGGAATCGTGTGGATGGACCACAGGCTGGAGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR TCA 72 bp | TTAATCCCTGGAGGCTTCCAGCATTCCACAAGGTCCTaGTGGAGGCTTGAGTGTCCCATCGAGTGTCAGTAC | + |
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Preference number: 3 (lower is better) Translates to: LIPGGFQHSTRS*WRLECPIECQY Trigger: GTACTGACACTCGATGGGACACTCAAGCCTCCATCAGGACCTTGTGGAATGCTGGAAGCCTCCAGGGATTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR CCA 72 bp | AGACGAGAAAGGAAGTTCATAGCAAGCTCCAGCCTGTaGTCCATCCACACGATTCCCATGAACAGTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: RRERKFIASSSL*SIHTIPMNSGR Trigger: CCTTCCACTGTTCATGGGAATCGTGTGGATGGACCACAGGCTGGAGCTTGCTATGAACTTCCTTTCTCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR-3UTR CAA 90 bp | CGGCAGCTCACAACTGTCTGTACCTCTAGTTCCAGGGTATCCAACACCCTCATACGTGGGCAATTCTTCTaGGAATCGTCAATCTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: RQLTTVCTSSSRVSNTLIRGQFF*ESSIWS Trigger: ACTCCAGATTGACGATTCCAAGAAGAATTGCCCACG...TATGAGGGTGTTGGATACCCTGGAACTAGAGGTACAGACAGTTGTGAGCTGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR GCA 90 bp | GGGATAGGGGAGGCTGGAGAGATGGCTCAATGGTTAAGAGCACTGACTGCTCTTGGAGACACGCAGGCCTaGTTGGCAGCCGCTCGGACG | + |
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Preference number: 4 (lower is better) Translates to: GIGEAGEMAQWLRALTALGDTQA*LAAART Trigger: CGTCCGAGCGGCTGCCAAGCAGGCCTGCGTGTCTCC...AAGAGCAGTCAGTGCTCTTAACCATTGAGCCATCTCTCCAGCCTCCCCTATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CCA 90 bp | AAGCTCCAGCCTGTGGTCCATCCACACGATTCCCATGAACAGTGGAAGGGACAGACACGCAGGCCTGCTTaGCAGCCGCTCGGACGCCAT | + |
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Preference number: 4 (lower is better) Translates to: KLQPVVHPHDSHEQWKGQTRRPA*QPLGRH Trigger: ATGGCGTCCGAGCGGCTGCCAAGCAGGCCTGCGTGT...CTGTCCCTTCCACTGTTCATGGGAATCGTGTGGATGGACCACAGGCTGGAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR GCA 90 bp | GGGATAGGGGAGGCTGGAGAGATGGCTCAATGGTTAAGAGCACTGACTGCTCTTCGGTCCAGCACCACGTaGACAGCGTCGGGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: GIGEAGEMAQWLRALTALRSSTT*TASGSL Trigger: CAGTGAGCCCGACGCTGTGCACGTGGTGCTGGACCG...AAGAGCAGTCAGTGCTCTTAACCATTGAGCCATCTCTCCAGCCTCCCCTATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CCA 90 bp | GAGTTCTCAGGGACTGCCTGGCCAGCCAAGACACTGTGCTGGGATGGAGGAAAGAGGGCAGCAACACCATaGCCAATGGCGCAGATGGGT | + |
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Preference number: 4 (lower is better) Translates to: EFSGTAWPAKTLCWDGGKRAATP*PMAQMG Trigger: ACCCATCTGCGCCATTGGCCATGGTGTTGCTGCCCT...CTTTCCTCCATCCCAGCACAGTGTCTTGGCTGGCCAGGCAGTCCCTGAGAACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CCA 90 bp | GAGGGGATAGGGGAGGCTGGAGAGATGGCTCAATGGTTAAGAGCACTGACTGCTTGGCCAGTGACCAGATaGCGGTCCAGCACCACGTGC | + |
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Preference number: 4 (lower is better) Translates to: EGIGEAGEMAQWLRALTAWPVTR*RSSTTC Trigger: GCACGTGGTGCTGGACCGCCATCTGGTCACTGGCCA...AGCAGTCAGTGCTCTTAACCATTGAGCCATCTCTCCAGCCTCCCCTATCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR TCA 90 bp | CCCGTGGGCAATTCTTCTTGGAATCGTCAATCTGGAGTTCTCAGGGACTGCCTGCGGGCTCACTGGCACTaGAGCCAGCACCAGAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PVGNSSWNRQSGVLRDCLRAHWH*SQHQSP Trigger: AGGACTCTGGTGCTGGCTTCAGTGCCAGTGAGCCCG...CAGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAGAATTGCCCACGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR TCA 90 bp | CTGACTGCTCTTCCAGAAGACCTGGGTTCAATTTTGAGCACCCAAGCGGCAGCTTGGCCACCTGTAGGTTaGAGGCAGCACTGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LTALPEDLGSILSTQAAAWPPVG*RQHWPV Trigger: CACTGGCCAGTGCTGCCTTCAACCTACAGGTGGCCA...AGCTGCCGCTTGGGTGCTCAAAATTGAACCCAGGTCTTCTGGAAGAGCAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR GCA 90 bp | CTTCTTGGAATCGTCAATCTGGAGTTCTCAGGGACTGCCTGGCCAGCCAAGACAGAGCCAGGGACCCACTaGTGGCAAGATCTGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLGIVNLEFSGTAWPAKTEPGTH*WQDLSG Trigger: CCCTGACAGATCTTGCCAGCAGTGGGTCCCTGGCTC...TGTCTTGGCTGGCCAGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR TCA 90 bp | CTTCTTGGAATCGTCAATCTGGAGTTCTCAGGGACTGCCTGGCCAGCCAAGACAGACTGGCGTATGCCTTaGGGCGGAAGTCTTGTACCC | + |
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Preference number: 4 (lower is better) Translates to: LLGIVNLEFSGTAWPAKTDWRMP*GGSLVP Trigger: GGGTACAAGACTTCCGCCTCAAGGCATACGCCAGTC...TGTCTTGGCTGGCCAGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CCA 90 bp | GAGGGGATAGGGGAGGCTGGAGAGATGGCTCAATGGTTAAGAGCACTGACTGCTGGAATCAGGAGGGCATaGTACCGGGCACCATCTATG | + |
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Preference number: 4 (lower is better) Translates to: EGIGEAGEMAQWLRALTAGIRRA*YRAPSM Trigger: CATAGATGGTGCCCGGTACCATGCCCTCCTGATTCC...AGCAGTCAGTGCTCTTAACCATTGAGCCATCTCTCCAGCCTCCCCTATCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR GCA 90 bp | GGAGGCTTGAGTGTCCCATCGAGTGTCAGTACAGGAGACCATGGTGAGTTCAGTAGCAGGACTGGCGTATaGCTTGAGGCGGAAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GGLSVPSSVSTGDHGEFSSRTGV*LEAEVL Trigger: CAAGACTTCCGCCTCAAGGCATACGCCAGTCCTGCT...ACTGAACTCACCATGGTCTCCTGTACTGACACTCGATGGGACACTCAAGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CCA 90 bp | CTTCTTGGAATCGTCAATCTGGAGTTCTCAGGGACTGCCTGGCCAGCCAAGACAGCCAGTGTGAAACAGTaGACGAAGGACTGGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LLGIVNLEFSGTAWPAKTASVKQ*TKDWAD Trigger: GTCAGCCCAGTCCTTCGTCCACTGTTTCACACTGGC...TGTCTTGGCTGGCCAGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CCA 90 bp | TCCCGTGGGCAATTCTTCTTGGAATCGTCAATCTGGAGTTCTCAGGGACTGCCTCATCCACAAAGTCAATaGCCTTTCCCCCTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SRGQFFLESSIWSSQGLPHPQSQ*PFPLGW Trigger: CCACCCCAGGGGGAAAGGCCATTGACTTTGTGGATG...AGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAGAATTGCCCACGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR CAA 72 bp | ACCCCACAGCTGACTACATCCCGTGGGCAATTCTTCTaGGAATCGTCAATCTGGAGTTCTCAGGGACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: TPQLTTSRGQFF*ESSIWSSQGLP Trigger: AGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAGAATTGCCCACGGGATGTAGTCAGCTGTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| 3UTR CAA 72 bp | GCACTGACTGCTCTTCCAGAAGACCTGGGTTCAATTTaGAGCACCCAAGCGGCAGCTCACAACTGTCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: ALTALPEDLGSI*STQAAAHNCLY Trigger: GTACAGACAGTTGTGAGCTGCCGCTTGGGTGCTCAAAATTGAACCCAGGTCTTCTGGAAGAGCAGTCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR GCA 90 bp | CCCGTGGGCAATTCTTCTTGGAATCGTCAATCTGGAGTTCTCAGGGACTGCCTGGTACCCATCGGGCATTaGTCTCAGTCACATCCACAA | + |
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Preference number: 4 (lower is better) Translates to: PVGNSSWNRQSGVLRDCLVPIGH*SQSHPQ Trigger: TTGTGGATGTGACTGAGAGCAATGCCCGATGGGTAC...CAGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAGAATTGCCCACGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CAA 90 bp | CACATGCCTTTAATCACAGCCTACGGGAGGCAGAGGCAGAGGCCGGTGGATCTCGACACGCAGGCCTGCTaGGCAGCCGCTCGGACGCCA | + |
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Preference number: 5 (lower is better) Translates to: HMPLITAYGRQRQRPVDLDTQAC*AAARTP Trigger: TGGCGTCCGAGCGGCTGCCAAGCAGGCCTGCGTGTC...GAGATCCACCGGCCTCTGCCTCTGCCTCCCGTAGGCTGTGATTAAAGGCATGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CCA 90 bp | TGGACAGCAGGAACTGTGGAGTTAGCGTTCTGGCCAGTGACCAGATaGCGGTCCAGCACCACGTGCACAGCGTCGGGCTCACTGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: WTAGTVELAFWPVTR*RSSTTCTASGSLAL Trigger: CAGTGCCAGTGAGCCCGACGCTGTGCACGTGGTGCTGGACCGCCATCTGGTCACTGGCCAGAACGCTAACTCCACAGTTCCTGCTGTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CCA 90 bp | TCTCAGAGCGGAAGTGCTGCAGTATTCGAGCCAGGGACCCACTGCTaGCAAGATCTGTCAGGGCGCCAGGACAGCTGGGAATCAGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: SQSGSAAVFEPGTHC*QDLSGRQDSWESGG Trigger: CCCTCCTGATTCCCAGCTGTCCTGGCGCCCTGACAGATCTTGCCAGCAGTGGGTCCCTGGCTCGAATACTGCAGCACTTCCGCTCTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS GCA 90 bp | TGCTCTCAGAGCGGAAGTGCTGCAGTATTCGAGCCAGGGACCCACTaGTGGCAAGATCTGTCAGGGCGCCAGGACAGCTGGGAATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: CSQSGSAAVFEPGTH*WQDLSGRQDSWESG Trigger: TCCTGATTCCCAGCTGTCCTGGCGCCCTGACAGATCTTGCCAGCAGTGGGTCCCTGGCTCGAATACTGCAGCACTTCCGCTCTGAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CCA 90 bp | GCAAGATCTGTCAGGGCGCCAGGACAGCTGGGAATCAGGAGGGCATaGTACCGGGCACCATCTATGGACTCAAGCTTAGCAGGACTGGCG | + |
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Preference number: 5 (lower is better) Translates to: ARSVRAPGQLGIRRA*YRAPSMDSSLAGLA Trigger: CGCCAGTCCTGCTAAGCTTGAGTCCATAGATGGTGCCCGGTACCATGCCCTCCTGATTCCCAGCTGTCCTGGCGCCCTGACAGATCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CCA 90 bp | AGGAAGAGCAGGTTCTGGACAGCAGGAACTGTGGAGTTAGCGTTCTaGCCAGTGACCAGATGGCGGTCCAGCACCACGTGCACAGCGTCG | + |
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Preference number: 5 (lower is better) Translates to: RKSRFWTAGTVELAF*PVTRWRSSTTCTAS Trigger: CGACGCTGTGCACGTGGTGCTGGACCGCCATCTGGTCACTGGCCAGAACGCTAACTCCACAGTTCCTGCTGTCCAGAACCTGCTCTTCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS GCA 90 bp | CCATGGCCAATGGCGCAGATGGGTTTGCTCTCAGAGCGGAAGTGCTaGAGTATTCGAGCCAGGGACCCACTGCTGGCAAGATCTGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PWPMAQMGLLSERKC*SIRARDPLLARSVR Trigger: CCTGACAGATCTTGCCAGCAGTGGGTCCCTGGCTCGAATACTGCAGCACTTCCGCTCTGAGAGCAAACCCATCTGCGCCATTGGCCATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS GCA 90 bp | ACACCATGGCCAATGGCGCAGATGGGTTTGCTCTCAGAGCGGAAGTaGTGCAGTATTCGAGCCAGGGACCCACTGCTGGCAAGATCTGTC | + |
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Preference number: 5 (lower is better) Translates to: TPWPMAQMGLLSERK*CSIRARDPLLARSV Trigger: GACAGATCTTGCCAGCAGTGGGTCCCTGGCTCGAATACTGCAGCACTTCCGCTCTGAGAGCAAACCCATCTGCGCCATTGGCCATGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CAA 90 bp | GAGGGGATAGGGGAGGCTGGAGAGATGGCTCAATGGTTAAGAGCACTGACTGCTGTGGCCACCTGTAGGTaGAAGGCAGCACTGGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: EGIGEAGEMAQWLRALTAVATCR*KAALAS Trigger: ACTGGCCAGTGCTGCCTTCAACCTACAGGTGGCCAC...AGCAGTCAGTGCTCTTAACCATTGAGCCATCTCTCCAGCCTCCCCTATCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CCA 90 bp | CAGGACCTATCTTCATTGGTAGCACAGCACAGGGCAGCAACACCATaGCCAATGGCGCAGATGGGTTTGCTCTCAGAGCGGAAGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QDLSSLVAQHRAATP*PMAQMGLLSERKCC Trigger: GCAGCACTTCCGCTCTGAGAGCAAACCCATCTGCGCCATTGGCCATGGTGTTGCTGCCCTGTGCTGTGCTACCAATGAAGATAGGTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS GCA 90 bp | GTACCGGGCACCATCTATGGACTCAAGCTTAGCAGGACTGGCGTATaGCTTGAGGCGGAAGTCTTGTACCCATCGGGCATTGCTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: VPGTIYGLKLSRTGV*LEAEVLYPSGIALS Trigger: ACTGAGAGCAATGCCCGATGGGTACAAGACTTCCGCCTCAAGGCATACGCCAGTCCTGCTAAGCTTGAGTCCATAGATGGTGCCCGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CAA 90 bp | TTCTTCTTGGAATCGTCAATCTGGAGTTCTCAGGGACTGCCTGGCCAGCCAAGATGTACCCATCGGGCATaGCTCTCAGTCACATCCACA | + |
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Preference number: 5 (lower is better) Translates to: FFLESSIWSSQGLPGQPRCTHRA*LSVTST Trigger: TGTGGATGTGACTGAGAGCAATGCCCGATGGGTACA...TCTTGGCTGGCCAGGCAGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CAA 90 bp | TACATCCCGTGGGCAATTCTTCTTGGAATCGTCAATCTGGAGTTCTCAGGGACTCTTGAGGCGGAAGTCTaGTACCCATCGGGCATTGCT | + |
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Preference number: 5 (lower is better) Translates to: YIPWAILLGIVNLEFSGTLEAEV*YPSGIA Trigger: AGCAATGCCCGATGGGTACAAGACTTCCGCCTCAAG...AGTCCCTGAGAACTCCAGATTGACGATTCCAAGAAGAATTGCCCACGGGATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CAA 90 bp | CAGTCCACAAGTATTAATCCCTGGAGGCTTCCAGCATTCCACAAGGTCCTGATGCAGGACCTATCTTCATaGGTAGCACAGCACAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: QSTSINPWRLPAFHKVLMQDLSS*VAQHRA Trigger: TGCCCTGTGCTGTGCTACCAATGAAGATAGGTCCTG...CATCAGGACCTTGTGGAATGCTGGAAGCCTCCAGGGATTAATACTTGTGGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS-3UTR CAA 90 bp | TGGTCGAGTCAGGCGCACGCAAGAACTCACATACATAAAATAAGTAAGTCTTCTGGACTGGCGTATGCCTaGAGGCGGAAGTCTTGTACC | + |
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Preference number: 5 (lower is better) Translates to: WSSQAHARTHIHKISKSSGLAYA*RRKSCT Trigger: GGTACAAGACTTCCGCCTCAAGGCATACGCCAGTCC...AGAAGACTTACTTATTTTATGTATGTGAGTTCTTGCGTGCGCCTGACTCGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CCA 72 bp | CGAAGGACTGGGCTGACACACCTTCGGAAGCGCCGCTaGCCACCAGGAGACACGCAGGCCTGCTTGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RRTGLTHLRKRR*PPGDTQACLAA Trigger: GGCTGCCAAGCAGGCCTGCGTGTCTCCTGGTGGCCAGCGGCGCTTCCGAAGGTGTGTCAGCCCAGTCCTTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS GCA 72 bp | AGCGGAAGTGCTGCAGTATTCGAGCCAGGGACCCACTaGTGGCAAGATCTGTCAGGGCGCCAGGACAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SGSAAVFEPGTH*WQDLSGRQDSW Trigger: CCAGCTGTCCTGGCGCCCTGACAGATCTTGCCAGCAGTGGGTCCCTGGCTCGAATACTGCAGCACTTCCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CCA 72 bp | GGAACTGTGGAGTTAGCGTTCTGGCCAGTGACCAGATaGCGGTCCAGCACCACGTGCACAGCGTCGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GTVELAFWPVTR*RSSTTCTASGS Trigger: TGAGCCCGACGCTGTGCACGTGGTGCTGGACCGCCATCTGGTCACTGGCCAGAACGCTAACTCCACAGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS TCA 72 bp | GCGGGCAAAGCCAGGTGCTCTGATGAGCTCGTACACTaGAGGCCCTGTCAGACTGTAGCCCTGGAACACCCA | + |
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Preference number: 6 (lower is better) Translates to: AGKARCSDELVH*RPCQTVALEHP Trigger: TGGGTGTTCCAGGGCTACAGTCTGACAGGGCCTTCAGTGTACGAGCTCATCAGAGCACCTGGCTTTGCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS TCA 72 bp | CCAGCACCACGTGCACAGCGTCGGGCTCACTGGCACTaGAGCCAGCACCAGAGTCCTTCACAAAGTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: PAPRAQRRAHWH*SQHQSPSQSPQ Trigger: TTGAGGACTTTGTGAAGGACTCTGGTGCTGGCTTCAGTGCCAGTGAGCCCGACGCTGTGCACGTGGTGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS GCA 72 bp | CCAATGGCGCAGATGGGTTTGCTCTCAGAGCGGAAGTaGTGCAGTATTCGAGCCAGGGACCCACTGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PMAQMGLLSERK*CSIRARDPLLA Trigger: TGCCAGCAGTGGGTCCCTGGCTCGAATACTGCAGCACTTCCGCTCTGAGAGCAAACCCATCTGCGCCATTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CCA 72 bp | AGGTTCTGGACAGCAGGAACTGTGGAGTTAGCGTTCTaGCCAGTGACCAGATGGCGGTCCAGCACCACGTGC | + |
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Preference number: 6 (lower is better) Translates to: RFWTAGTVELAF*PVTRWRSSTTC Trigger: GCACGTGGTGCTGGACCGCCATCTGGTCACTGGCCAGAACGCTAACTCCACAGTTCCTGCTGTCCAGAACCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CAA 90 bp | TCCACAAAGTCAATGGCCTTTCCCCCTGGGGTGGCCACCTGTAGGTaGAAGGCAGCACTGGCCAGTGTGAAACAGTGGACGAAGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: STKSMAFPPGVATCR*KAALASVKQWTKDW Trigger: CCAGTCCTTCGTCCACTGTTTCACACTGGCCAGTGCTGCCTTCAACCTACAGGTGGCCACCCCAGGGGGAAAGGCCATTGACTTTGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS GCA 72 bp | ATGGCGCAGATGGGTTTGCTCTCAGAGCGGAAGTGCTaGAGTATTCGAGCCAGGGACCCACTGCTGGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: MAQMGLLSERKC*SIRARDPLLAR Trigger: TCTTGCCAGCAGTGGGTCCCTGGCTCGAATACTGCAGCACTTCCGCTCTGAGAGCAAACCCATCTGCGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CCA 72 bp | AGCACAGGGCAGCAACACCATGGCCAATGGCGCAGATaGGTTTGCTCTCAGAGCGGAAGTGCTGCAGTATTC | + |
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Preference number: 6 (lower is better) Translates to: STGQQHHGQWRR*VCSQSGSAAVF Trigger: GAATACTGCAGCACTTCCGCTCTGAGAGCAAACCCATCTGCGCCATTGGCCATGGTGTTGCTGCCCTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CAA 90 bp | CGGGCACCATCTATGGACTCAAGCTTAGCAGGACTGGCGTATGCCTaGAGGCGGAAGTCTTGTACCCATCGGGCATTGCTCTCAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: RAPSMDSSLAGLAYA*RRKSCTHRALLSVT Trigger: TGTGACTGAGAGCAATGCCCGATGGGTACAAGACTTCCGCCTCAAGGCATACGCCAGTCCTGCTAAGCTTGAGTCCATAGATGGTGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CAA 72 bp | CTTAGCAGGACTGGCGTATGCCTTGAGGCGGAAGTCTaGTACCCATCGGGCATTGCTCTCAGTCACATCCAC | + |
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Preference number: 6 (lower is better) Translates to: LSRTGVCLEAEV*YPSGIALSHIH Trigger: GTGGATGTGACTGAGAGCAATGCCCGATGGGTACAAGACTTCCGCCTCAAGGCATACGCCAGTCCTGCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CAA 72 bp | TCTATGGACTCAAGCTTAGCAGGACTGGCGTATGCCTaGAGGCGGAAGTCTTGTACCCATCGGGCATTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SMDSSLAGLAYA*RRKSCTHRALL Trigger: GAGCAATGCCCGATGGGTACAAGACTTCCGCCTCAAGGCATACGCCAGTCCTGCTAAGCTTGAGTCCATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS GCA 72 bp | ACCATCTATGGACTCAAGCTTAGCAGGACTGGCGTATaGCTTGAGGCGGAAGTCTTGTACCCATCGGGCATT | + |
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Preference number: 6 (lower is better) Translates to: TIYGLKLSRTGV*LEAEVLYPSGI Trigger: AATGCCCGATGGGTACAAGACTTCCGCCTCAAGGCATACGCCAGTCCTGCTAAGCTTGAGTCCATAGATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CAA 90 bp | GGACTCAAGCTTAGCAGGACTGGCGTATGCCTTGAGGCGGAAGTCTaGTACCCATCGGGCATTGCTCTCAGTCACATCCACAAAGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: GLKLSRTGVCLEAEV*YPSGIALSHIHKVN Trigger: ATTGACTTTGTGGATGTGACTGAGAGCAATGCCCGATGGGTACAAGACTTCCGCCTCAAGGCATACGCCAGTCCTGCTAAGCTTGAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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| CDS CAA 72 bp | TATGCCTTGAGGCGGAAGTCTTGTACCCATCGGGCATaGCTCTCAGTCACATCCACAAAGTCAATGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: YALRRKSCTHRA*LSVTSTKSMAF Trigger: AAAGGCCATTGACTTTGTGGATGTGACTGAGAGCAATGCCCGATGGGTACAAGACTTCCGCCTCAAGGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106008.3 |
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