Pregenerated sensors for GATAD2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036180Ensembl transcript IDs: ENSMUST00000065169.12, ENSMUST00000116463.4, ENSMUST00000177851.9, ENSMUST00000211960.2, ENSMUST00000212277.2, ENSMUST00000212478.2
Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTGCCATCTCTGGTGCCACTCCGAGCATCCTCTGGGGTTAGAGCCTaGCCAAGTGCACTGTGTATGACAGTGACTCTGGGTCTATGCAGT | + |
Preference number: 1 (lower is better) Translates to: LPSLVPLRASSGVRA*PSALCMTVTLGLCS Trigger: ACTGCATAGACCCAGAGTCACTGTCATACACAGTGCACTTGGGCAGGCTCTAACCCCAGAGGATGCTCGGAGTGGCACCAGAGATGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR TCA 90 bp | AACAGAACAGAAGTAGACTGGGCCCTTTCAGGCGTCCCTGTGGATTaGGAGGGAGTAAGCTCTGCTGACTCCAGACCTAAGGGCTGTGGC | + |
Preference number: 1 (lower is better) Translates to: NRTEVDWALSGVPVD*EGVSSADSRPKGCG Trigger: GCCACAGCCCTTAGGTCTGGAGTCAGCAGAGCTTACTCCCTCTCAATCCACAGGGACGCCTGAAAGGGCCCAGTCTACTTCTGTTCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 90 bp | GAGAGGCCACCCCGGTGCTGCCGTTCCAAGGAGCCAGAAGACTTTTaGTCTATGTCATTGCCACTTAGGAAGGGTGGAGAACAGGAACTG | + |
Preference number: 1 (lower is better) Translates to: ERPPRCCRSKEPEDF*SMSLPLRKGGEQEL Trigger: CAGTTCCTGTTCTCCACCCTTCCTAAGTGGCAATGACATAGACCAAAAGTCTTCTGGCTCCTTGGAACGGCAGCACCGGGGTGGCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CCA 90 bp | AAGCTTTGGCTTCCCTGGGGTGGTGGGGAAGACCGTGATCAGGTCTaGAGGCTGTTCATAGGACCACTGTCCCAACAACCAAACCTAGGT | + |
Preference number: 1 (lower is better) Translates to: KLWLPWGGGEDRDQV*RLFIGPLSQQPNLG Trigger: ACCTAGGTTTGGTTGTTGGGACAGTGGTCCTATGAACAGCCTCCAGACCTGATCACGGTCTTCCCCACCACCCCAGGGAAGCCAAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR TCA 90 bp | AAAGGCAAAAAGGAAAGAGAAGGCCCATTGGGAGGTCCCTCATTCTaGTCCTGGGCACCATGGTGGCACACTCTCCTGGCCAAAGCAAGG | + |
Preference number: 1 (lower is better) Translates to: KGKKEREGPLGGPSF*SWAPWWHTLLAKAR Trigger: CCTTGCTTTGGCCAGGAGAGTGTGCCACCATGGTGCCCAGGATCAGAATGAGGGACCTCCCAATGGGCCTTCTCTTTCCTTTTTGCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR GCA 90 bp | CTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATaGCTCTTGGCAGGCATGGGAATCATGAGATTGTGTCCATCAAAA | + |
Preference number: 1 (lower is better) Translates to: LTPDLRAVAGPYLDG*LLAGMGIMRLCPSK Trigger: TTTTGATGGACACAATCTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 90 bp | CTGGTGTCGGGCAAACTAAAGGCAAAAAGGAAAGAGAAGGCCCATTaGGAGGTCCCTCATTCTGATCCTGGGCACCATGGTGGCACACTC | + |
Preference number: 1 (lower is better) Translates to: LVSGKLKAKRKEKAH*EVPHSDPGHHGGTL Trigger: GAGTGTGCCACCATGGTGCCCAGGATCAGAATGAGGGACCTCCCAATGGGCCTTCTCTTTCCTTTTTGCCTTTAGTTTGCCCGACACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 90 bp | GCATTTACAATCCTTACTACTGCCTGGGGCAAGCTTTGGCTTCCCTaGGGTGGTGGGGAAGACCGTGATCAGGTCTGGAGGCTGTTCATA | + |
Preference number: 1 (lower is better) Translates to: AFTILTTAWGKLWLP*GGGEDRDQVWRLFI Trigger: TATGAACAGCCTCCAGACCTGATCACGGTCTTCCCCACCACCCCAGGGAAGCCAAAGCTTGCCCCAGGCAGTAGTAAGGATTGTAAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR GCA 90 bp | CCAAACATGGCCCTTCAGTCCCCAGTCCTTATCATGTTGAGGGCTTaGTGCATAGGCCAGTGTGGTGCAGAAGAACAGGCAGCACTTTCA | + |
Preference number: 1 (lower is better) Translates to: PNMALQSPVLIMLRA*CIGQCGAEEQAALS Trigger: TGAAAGTGCTGCCTGTTCTTCTGCACCACACTGGCCTATGCAGCAAGCCCTCAACATGATAAGGACTGGGGACTGAAGGGCCATGTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CCA 90 bp | ATTAAAGTCCCTAACTGTACTGTGTCAAGGGAAACCAGGGTTGGATaGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCGCCCGT | + |
Preference number: 1 (lower is better) Translates to: IKVPNCTVSRETRVG*GNDGDQSQEQKAAR Trigger: ACGGGCGGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTCCCTTGACACAGTACAGTTAGGGACTTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 90 bp | GAGCCTTTATTAGGAGGAGGCAGGGGGCGTGTCTGCAGAGGGCGGTaGTCCGCAGAACAAGGGTTTAAATTAAAGTCCCTAACTGTACTG | + |
Preference number: 1 (lower is better) Translates to: EPLLGGGRGRVCRGR*SAEQGFKLKSLTVL Trigger: CAGTACAGTTAGGGACTTTAATTTAAACCCTTGTTCTGCGGACCACCGCCCTCTGCAGACACGCCCCCTGCCTCCTCCTAATAAAGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 90 bp | TGGAGGTGTTTGTTACAGCCAGCATTTACAATCCTTACTACTGCCTaGGGCAAGCTTTGGCTTCCCTGGGGTGGTGGGGAAGACCGTGAT | + |
Preference number: 1 (lower is better) Translates to: WRCLLQPAFTILTTA*GKLWLPWGGGEDRD Trigger: ATCACGGTCTTCCCCACCACCCCAGGGAAGCCAAAGCTTGCCCCAGGCAGTAGTAAGGATTGTAAATGCTGGCTGTAACAAACACCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR GCA 90 bp | ACAGAATATGGGCTGCAATTCGTTCTAAGTGTGGAAGCCAGGGGTTaGAGTGAGCAGCAACAGACAACTAGAGTCAGGGTGGTACCTGCC | + |
Preference number: 1 (lower is better) Translates to: TEYGLQFVLSVEARG*SEQQQTTRVRVVPA Trigger: GGCAGGTACCACCCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAGAACGAATTGCAGCCCATATTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 90 bp | GTGAGGTGCATAAACTGGGCCTACAAGGGTTGGATGACAGGTGTATaGGAGAAGTCACAAGACTTGGAAGTCTGGATGCACCAGGACAAC | + |
Preference number: 1 (lower is better) Translates to: VRCINWAYKGWMTGV*EKSQDLEVWMHQDN Trigger: GTTGTCCTGGTGCATCCAGACTTCCAAGTCTTGTGACTTCTCCCATACACCTGTCATCCAACCCTTGTAGGCCCAGTTTATGCACCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR TCA 90 bp | AAACTGACCACTTTTTGGAAACAATCCAAGGTCTTCAGGCTGACATaGCTCATGGCGAGGACCACTCTTACCCTCAACAGCATTCAGGCT | + |
Preference number: 1 (lower is better) Translates to: KLTTFWKQSKVFRLT*LMARTTLTLNSIQA Trigger: AGCCTGAATGCTGTTGAGGGTAAGAGTGGTCCTCGCCATGAGTCATGTCAGCCTGAAGACCTTGGATTGTTTCCAAAAAGTGGTCAGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CCA 90 bp | ACTGTCCCAACAACCAAACCTAGGTCACACATCTGTCAAAAGGTCTaGTTCGACAAATACAGATGTGTTCTGTGCTTGGCTCCTCCCTTC | + |
Preference number: 1 (lower is better) Translates to: TVPTTKPRSHICQKV*FDKYRCVLCLAPPF Trigger: GAAGGGAGGAGCCAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGACAGATGTGTGACCTAGGTTTGGTTGTTGGGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CCA 90 bp | TCTGTCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTaGCTCCTCCCTTCAAACCTGTCCCTAGCAGTTAGTAGAGGAAAT | + |
Preference number: 1 (lower is better) Translates to: SVKRSGSTNTDVFCA*LLPSNLSLAVSRGN Trigger: ATTTCCTCTACTAACTGCTAGGGACAGGTTTGAAGGGAGGAGCCAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR TCA 90 bp | TTTGGTCTATGTCATTGCCACTTAGGAAGGGTGGAGAACAGGAACTaGCTTGCCAGGCACAAAAATACTCAAGGACTAAGAAATGCTTGC | + |
Preference number: 1 (lower is better) Translates to: FGLCHCHLGRVENRN*LARHKNTQGLRNAC Trigger: GCAAGCATTTCTTAGTCCTTGAGTATTTTTGTGCCTGGCAAGTCAGTTCCTGTTCTCCACCCTTCCTAAGTGGCAATGACATAGACCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR TCA 90 bp | ATTTCTTTATTGTCCTTCAGGGTTTCAGACTTCCCCATGACACAGTaGCTACCAATTTCAGCTCATTTATTGGAACATCTATTCCAGTTT | + |
Preference number: 1 (lower is better) Translates to: ISLLSFRVSDFPMTQ*LPISAHLLEHLFQF Trigger: AAACTGGAATAGATGTTCCAATAAATGAGCTGAAATTGGTAGTCACTGTGTCATGGGGAAGTCTGAAACCCTGAAGGACAATAAAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCAAGCTCCCACCCACGCTaGCCAGGCAGAGCTGGCCCC | + |
Preference number: 2 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPSSHPR*PGRAGP Trigger: GGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGCT...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR GCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCTTCGGGAGCCCCCGGTaGCAGCCTGGCCCGGGTGTG | + |
Preference number: 2 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCFGSPR*QPGPGV Trigger: CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAA...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCAGCTCCCACCCACGCTaGCCAGGCAGAGCTGGCCCC | + |
Preference number: 2 (lower is better) Translates to: ETRVGWGNDGDQSQEQKASSHPR*PGRAGP Trigger: GGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGCT...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCAAAAGAGAAGGCCCATTaGGAGGTCCCTCATTCTGAT | + |
Preference number: 2 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPKEKAH*EVPHSD Trigger: ATCAGAATGAGGGACCTCCCAATGGGCCTTCTCTTT...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR TCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCACCTATAGATGGCCATaGAGAGGCAGAGACTGGGGA | + |
Preference number: 2 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCTYRWP*RGRDWG Trigger: TCCCCAGTCTCTGCCTCTTCATGGCCATCTATAGGT...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR GCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCTCTGGGGTTAGAGCCTaGCCAAGTGCACTGTGTATG | + |
Preference number: 2 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCSGVRA*PSALCM Trigger: CATACACAGTGCACTTGGGCAGGCTCTAACCCCAGA...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGCTAGACCAAGGGCCTTaGGAGAGAAGAGGGCCTGTC | + |
Preference number: 2 (lower is better) Translates to: CGWALPGWMPLGRHGNHELDQGP*ERRGPV Trigger: GACAGGCCCTCTTCTCTCCCAAGGCCCTTGGTCTAG...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR GCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCCCTACCTGGATGGATaGCTCTTGGCAGGCATGGGA | + |
Preference number: 2 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAPYLDG*LLAGMG Trigger: TCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTAGGTGGCACACTCTCCTaGCCAAAGCAAGGCAACAGC | + |
Preference number: 2 (lower is better) Translates to: SNQLWLQHSGLSISLEPLGGTLS*PKQGNS Trigger: GCTGTTGCCTTGCTTTGGCCAGGAGAGTGTGCCACC...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR TCA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAAGGAGGTCCCTCATTCTaGTCCTGGGCACCATGGTGG | + |
Preference number: 2 (lower is better) Translates to: GPKVRVSAGVGQTKGKKEGGPSF*SWAPWW Trigger: CCACCATGGTGCCCAGGATCAGAATGAGGGACCTCC...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR GCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGTCTGGGGTTAGAGCCTaGCCAAGTGCACTGTGTATG | + |
Preference number: 2 (lower is better) Translates to: CGWALPGWMPLGRHGNHESGVRA*PSALCM Trigger: CATACACAGTGCACTTGGGCAGGCTCTAACCCCAGA...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGAGCTCCCACCCACGCTaGCCAGGCAGAGCTGGCCCC | + |
Preference number: 2 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGSSHPR*PGRAGP Trigger: GGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGCT...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | TCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGGCTCCTCCCTTAGCTCCCACCCACGCTaGCCAGGCAGAGCTGGCCCC | + |
Preference number: 2 (lower is better) Translates to: SKGLVRQIQMCSVLGSSLSSHPR*PGRAGP Trigger: GGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGCT...AAGGGAGGAGCCAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGCTAGACCAAGGGCCTTaGGAGAGAAGAGGGCCTGTC | + |
Preference number: 2 (lower is better) Translates to: LSVEARGCSEQQQTTRVRLDQGP*ERRGPV Trigger: GACAGGCCCTCTTCTCTCCCAAGGCCCTTGGTCTAG...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CAA 90 bp | CCCAAACATGGCCCTTCAGTCCCCAGTCCTTATCATGTTGAGGGCTaGCTGCATAGGCCAGTGTGGTGCAGAAGAACAGGCAGCACTTTC | + |
Preference number: 2 (lower is better) Translates to: PKHGPSVPSPYHVEG*LHRPVWCRRTGSTF Trigger: GAAAGTGCTGCCTGTTCTTCTGCACCACACTGGCCTATGCAGCAAGCCCTCAACATGATAAGGACTGGGGACTGAAGGGCCATGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CAA 90 bp | TGTACACCCCCAAACATGGCCCTTCAGTCCCCAGTCCTTATCATGTaGAGGGCTTGCTGCATAGGCCAGTGTGGTGCAGAAGAACAGGCA | + |
Preference number: 2 (lower is better) Translates to: CTPPNMALQSPVLIM*RACCIGQCGAEEQA Trigger: TGCCTGTTCTTCTGCACCACACTGGCCTATGCAGCAAGCCCTCAACATGATAAGGACTGGGGACTGAAGGGCCATGTTTGGGGGTGTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR TCA 90 bp | CTCAACAGCATTCAGGCTGACTCAGTGCATGGAGGTGTTTGTTACAGCCAGCATGGAGGTCCCTCATTCTaGTCCTGGGCACCATGGTGG | + |
Preference number: 2 (lower is better) Translates to: LNSIQADSVHGGVCYSQHGGPSF*SWAPWW Trigger: CCACCATGGTGCCCAGGATCAGAATGAGGGACCTCC...ATGCTGGCTGTAACAAACACCTCCATGCACTGAGTCAGCCTGAATGCTGTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR GCA 90 bp | GCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGAGGATCAGAAAAGAGAGGCCACCCCGGTaGTGCCGTTCCAAGGAGCCA | + |
Preference number: 2 (lower is better) Translates to: APIPIPCTSVTYTLRIRKERPPR*CRSKEP Trigger: TGGCTCCTTGGAACGGCAGCACCGGGGTGGCCTCTC...TTTTCTGATCCTCAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | GCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGAGGATCAGAAAAGCCTGGGGCAAGCTTTaGCTTCCCTGGGGTGGTGGG | + |
Preference number: 2 (lower is better) Translates to: APIPIPCTSVTYTLRIRKAWGKL*LPWGGG Trigger: CCCACCACCCCAGGGAAGCCAAAGCTTGCCCCAGGC...TTTTCTGATCCTCAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CAA 90 bp | CCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCCTCTaGGCAGGCATGGGAATCATGAGATTGTGTCCATCAAAAGAGAAA | + |
Preference number: 2 (lower is better) Translates to: PDLRAVAGPYLDGCL*AGMGIMRLCPSKEK Trigger: TTTCTCTTTTGATGGACACAATCTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CAA 90 bp | CGGTGCTGCCGTTCCAAGGAGCCAGAAGACTTTTGGTCTATGTCATaGCCACTTAGGAAGGGTGGAGAACAGGAACTGACTTGCCAGGCA | + |
Preference number: 2 (lower is better) Translates to: RCCRSKEPEDFWSMS*PLRKGGEQELTCQA Trigger: TGCCTGGCAAGTCAGTTCCTGTTCTCCACCCTTCCTAAGTGGCAATGACATAGACCAAAAGTCTTCTGGCTCCTTGGAACGGCAGCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CAA 90 bp | GGGAGGTCTGTCCCTTGTGAGGTGCATAAACTGGGCCTACAAGGGTaGGATGACAGGTGTATGGGAGAAGTCACAAGACTTGGAAGTCTG | + |
Preference number: 2 (lower is better) Translates to: GRSVPCEVHKLGLQG*DDRCMGEVTRLGSL Trigger: CAGACTTCCAAGTCTTGTGACTTCTCCCATACACCTGTCATCCAACCCTTGTAGGCCCAGTTTATGCACCTCACAAGGGACAGACCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR TCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGGGAGGTCCCTCATTCTaGTCCTGGGCACCATGGTGG | + |
Preference number: 2 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGGGPSF*SWAPWW Trigger: CCACCATGGTGCCCAGGATCAGAATGAGGGACCTCC...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCATTTCAGACAGAATATaGGCTGCAATTCGTTCTAAG | + |
Preference number: 2 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCISDRI*AAIRSK Trigger: CTTAGAACGAATTGCAGCCCATATTCTGTCTGAAAT...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR TCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGGGCGTCCCTGTGGATTaGGAGGGAGTAAGCTCTGCT | + |
Preference number: 2 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGGVPVD*EGVSSA Trigger: AGCAGAGCTTACTCCCTCTCAATCCACAGGGACGCC...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGCTAGACCAAGGGCCTTaGGAGAGAAGAGGGCCTGTC | + |
Preference number: 2 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGLDQGP*ERRGPV Trigger: GACAGGCCCTCTTCTCTCCCAAGGCCCTTGGTCTAG...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR GCA 90 bp | CAAGTAGCAACTGCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGCATAGGCCAGTGTGGTaGAGAAGAACAGGCAGCACT | + |
Preference number: 2 (lower is better) Translates to: QVATAPIPIPCTSVTYTLHRPVW*RRTGST Trigger: AGTGCTGCCTGTTCTTCTGCACCACACTGGCCTATG...CAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGCAGTTGCTACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | CAAGTAGCAACTGCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGTGGGCCTACAAGGGTTaGATGACAGGTGTATGGGAG | + |
Preference number: 2 (lower is better) Translates to: QVATAPIPIPCTSVTYTLWAYKG*MTGVWE Trigger: CTCCCATACACCTGTCATCCAACCCTTGTAGGCCCA...CAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGCAGTTGCTACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR TCA 90 bp | TCACACATCTGTCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGGGCGTCCCTGTGGATTaGGAGGGAGTAAGCTCTGCT | + |
Preference number: 2 (lower is better) Translates to: SHICQKVWFDKYRCVLCLGVPVD*EGVSSA Trigger: AGCAGAGCTTACTCCCTCTCAATCCACAGGGACGCC...CAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGACAGATGTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR GCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGTCTGGGGTTAGAGCCTaGCCAAGTGCACTGTGTATG | + |
Preference number: 2 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGSGVRA*PSALCM Trigger: CATACACAGTGCACTTGGGCAGGCTCTAACCCCAGA...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAACTAGACCAAGGGCCTTaGGAGAGAAGAGGGCCTGTC | + |
Preference number: 2 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKLDQGP*ERRGPV Trigger: GACAGGCCCTCTTCTCTCCCAAGGCCCTTGGTCTAG...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | TCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGGCTCCTCCCTTCAACTAGAGTCAGGGTaGTACCTGCCATCTCTGGTG | + |
Preference number: 2 (lower is better) Translates to: SKGLVRQIQMCSVLGSSLQLESG*YLPSLV Trigger: CACCAGAGATGGCAGGTACCACCCTGACTCTAGTTG...AAGGGAGGAGCCAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCTTCTGCCTTTCACCATaGAACCAATTGTTAAGAGAA | + |
Preference number: 2 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAFCLSP*NQLLRE Trigger: TTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAA...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | CAAGTAGCAACTGCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGGATGTGTTCTGTGCTTaGCTCCTCCCTTCAAACCTG | + |
Preference number: 2 (lower is better) Translates to: QVATAPIPIPCTSVTYTLDVFCA*LLPSNL Trigger: CAGGTTTGAAGGGAGGAGCCAAGCACAGAACACATC...CAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGCAGTTGCTACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR GCA 90 bp | CTCAACAGCATTCAGGCTGACTCAGTGCATGGAGGTGTTTGTTACAGCCAGCATGAGCCACTGATGTGTTaGCTCTGGGAAATCAATGAA | + |
Preference number: 2 (lower is better) Translates to: LNSIQADSVHGGVCYSQHEPLMC*LWEINE Trigger: TTCATTGATTTCCCAGAGGCAACACATCAGTGGCTC...ATGCTGGCTGTAACAAACACCTCCATGCACTGAGTCAGCCTGAATGCTGTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR GCA 90 bp | TACAGCCAGCATTTACAATCCTTACTACTGCCTGGGGCAAGCTTTGGCTTCCCTTACAGATGTGTTCTGTaGTTGGCTCCTCCCTTCAAA | + |
Preference number: 2 (lower is better) Translates to: YSQHLQSLLLPGASFGFPYRCVL*LAPPFK Trigger: TTTGAAGGGAGGAGCCAAGCACAGAACACATCTGTA...AGGGAAGCCAAAGCTTGCCCCAGGCAGTAGTAAGGATTGTAAATGCTGGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR TCA 90 bp | AAACTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAACCTATAGATGGCCATaGAGAGGCAGAGACTGGGGA | + |
Preference number: 2 (lower is better) Translates to: KLQFLLIPPKPPWEVTHSTYRWP*RGRDWG Trigger: TCCCCAGTCTCTGCCTCTTCATGGCCATCTATAGGT...TGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGAAAGAGAAGGCCCATTaGGAGGTCCCTCATTCTGAT | + |
Preference number: 2 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGKEKAH*EVPHSD Trigger: ATCAGAATGAGGGACCTCCCAATGGGCCTTCTCTTT...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CCA 90 bp | GCCAGGCACAAAAATACTCAAGGACTAAGAAATGCTTGCATATATTCTCTCTCTCTGGCTCCAGCACAGTaGACTCAGCATCTCTCTGGA | + |
Preference number: 2 (lower is better) Translates to: ARHKNTQGLRNACIYSLSLAPAQ*TQHLSG Trigger: TCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAG...AGAGAGAGAATATATGCAAGCATTTCTTAGTCCTTGAGTATTTTTGTGCCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | ATGGTGTTACCTGTGACCTTGATGACCAGAGCCACTGATGTGTTGCCTCTGGGACAATTGTTAAGAGAATaGGGGGAGAAGGAAACAAAA | + |
Preference number: 2 (lower is better) Translates to: MVLPVTLMTRATDVLPLGQLLRE*GEKETK Trigger: TTTTGTTTCCTTCTCCCCCCATTCTCTTAACAATTG...TCCCAGAGGCAACACATCAGTGGCTCTGGTCATCAAGGTCACAGGTAACACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | TACAGCCAGCATTTACAATCCTTACTACTGCCTGGGGCAAGCTTTGGCTTCCCTTTCTGCCTTTCACCATaGAACCAATTGTTAAGAGAA | + |
Preference number: 2 (lower is better) Translates to: YSQHLQSLLLPGASFGFPFCLSP*NQLLRE Trigger: TTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAA...AGGGAAGCCAAAGCTTGCCCCAGGCAGTAGTAAGGATTGTAAATGCTGGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | CTCAACAGCATTCAGGCTGACTCAGTGCATGGAGGTGTTTGTTACAGCCAGCATATCTGTCAAAAGGTCTaGTTCGACAAATACAGATGT | + |
Preference number: 2 (lower is better) Translates to: LNSIQADSVHGGVCYSQHICQKV*FDKYRC Trigger: ACATCTGTATTTGTCGAACCAGACCTTTTGACAGAT...ATGCTGGCTGTAACAAACACCTCCATGCACTGAGTCAGCCTGAATGCTGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR GCA 90 bp | CTCAACAGCATTCAGGCTGACTCAGTGCATGGAGGTGTTTGTTACAGCCAGCATTCAAGGACTAAGAAATaGTTGCATATATTCTCTCTC | + |
Preference number: 2 (lower is better) Translates to: LNSIQADSVHGGVCYSQHSRTKK*LHIFSL Trigger: GAGAGAGAATATATGCAAGCATTTCTTAGTCCTTGA...ATGCTGGCTGTAACAAACACCTCCATGCACTGAGTCAGCCTGAATGCTGTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | CAAGTAGCAACTGCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGAAACTGACCACTTTTTaGAAACAATCCAAGGTCTTC | + |
Preference number: 2 (lower is better) Translates to: QVATAPIPIPCTSVTYTLKLTTF*KQSKVF Trigger: GAAGACCTTGGATTGTTTCCAAAAAGTGGTCAGTTT...CAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGCAGTTGCTACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | GCCAGGCACAAAAATACTCAAGGACTAAGAAATGCTTGCATATATTCTCTCTCTAAAGAGAAGGCCCATTaGGAGGTCCCTCATTCTGAT | + |
Preference number: 2 (lower is better) Translates to: ARHKNTQGLRNACIYSLSKEKAH*EVPHSD Trigger: ATCAGAATGAGGGACCTCCCAATGGGCCTTCTCTTT...AGAGAGAGAATATATGCAAGCATTTCTTAGTCCTTGAGTATTTTTGTGCCTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | TCACACATCTGTCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGGAGCCAGAAGACTTTTaGTCTATGTCATTGCCACTT | + |
Preference number: 2 (lower is better) Translates to: SHICQKVWFDKYRCVLCLEPEDF*SMSLPL Trigger: AAGTGGCAATGACATAGACCAAAAGTCTTCTGGCTC...CAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGACAGATGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CCA 90 bp | AAACTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCATTCTGCCTTTCACCATaGAACCAATTGTTAAGAGAA | + |
Preference number: 2 (lower is better) Translates to: KLQFLLIPPKPPWEVTHSFCLSP*NQLLRE Trigger: TTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAA...TGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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3UTR GCA 72 bp | AAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTaGCAGCCTGGCCCGGGTGTGTCACAGTGTCCAGGG | + |
Preference number: 3 (lower is better) Translates to: KTKSRLNFGSPR*QPGPGVSQCPG Trigger: CCCTGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 72 bp | TGTGTCACAGTGTCCAGGGTGAGCTCCCACCCACGCTaGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCT | + |
Preference number: 3 (lower is better) Translates to: CVTVSRVSSHPR*PGRAGPKVRVS Trigger: AGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGCTCACCCTGGACACTGTGACACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CAA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCCCTAGACCAAGGGCCTaGGGAGAGAAGAGGGCCTGT | + |
Preference number: 3 (lower is better) Translates to: KENEIPAQLREPPVPAWPPRPRA*GEKRAC Trigger: ACAGGCCCTCTTCTCTCCCAAGGCCCTTGGTCTAGG...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR GCA 72 bp | CGACGGCGACCAATCACAAGAGCAGAAGGCCGCCCGTaGGTGCTGGACACACAGCTACTTCTGCCTTTCACC | + |
Preference number: 3 (lower is better) Translates to: RRRPITRAEGRP*VLDTQLLLPFT Trigger: GGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCCTTCTGCTCTTGTGATTGGTCGCCGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR-3UTR CAA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCAAGGCGTCCCTGTGGATaGAGAGGGAGTAAGCTCTGC | + |
Preference number: 3 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPRRPCG*RGSKLC Trigger: GCAGAGCTTACTCCCTCTCAATCCACAGGGACGCCT...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR TCA 72 bp | CTGATCAGTGACTGCATAGGAATGAGGACTTCTGGCTaGGAGGCCACCCCGGTGCTGCCGTTCCAAGGAGCC | + |
Preference number: 3 (lower is better) Translates to: LISDCIGMRTSG*EATPVLPFQGA Trigger: GGCTCCTTGGAACGGCAGCACCGGGGTGGCCTCTCAGCCAGAAGTCCTCATTCCTATGCAGTCACTGATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR GCA 72 bp | GGCGACCAATCACAAGAGCAGAAGGCCGCCCGTGCGTaGTGGACACACAGCTACTTCTGCCTTTCACCATGG | + |
Preference number: 3 (lower is better) Translates to: GDQSQEQKAARA*WTHSYFCLSPW Trigger: CCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCCTTCTGCTCTTGTGATTGGTCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 72 bp | GTAAGCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTaGGCCCTACCTGGATGGATGCCTCTTGGCAGGCAT | + |
Preference number: 3 (lower is better) Translates to: VSSADSRPKGCG*ALPGWMPLGRH Trigger: ATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGCTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 72 bp | ATCCTTACTACTGCCTGGGGCAAGCTTTGGCTTCCCTaGGGTGGTGGGGAAGACCGTGATCAGGTCTGGAGG | + |
Preference number: 3 (lower is better) Translates to: ILTTAWGKLWLP*GGGEDRDQVWR Trigger: CCTCCAGACCTGATCACGGTCTTCCCCACCACCCCAGGGAAGCCAAAGCTTGCCCCAGGCAGTAGTAAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CAA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTACCTAGACCAAGGGCCTaGGGAGAGAAGAGGGCCTGT | + |
Preference number: 3 (lower is better) Translates to: SNQLWLQHSGLSISLEPLPRPRA*GEKRAC Trigger: ACAGGCCCTCTTCTCTCCCAAGGCCCTTGGTCTAGG...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR TCA 72 bp | AAGGAAAGAGAAGGCCCATTGGGAGGTCCCTCATTCTaGTCCTGGGCACCATGGTGGCACACTCTCCTGGCC | + |
Preference number: 3 (lower is better) Translates to: KEREGPLGGPSF*SWAPWWHTLLA Trigger: GGCCAGGAGAGTGTGCCACCATGGTGCCCAGGATCAGAATGAGGGACCTCCCAATGGGCCTTCTCTTTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR TCA 72 bp | CAAGCTTTGGCTTCCCTGGGGTGGTGGGGAAGACCGTaGTCAGGTCTGGAGGCTGTTCATAGGACCACTGTC | + |
Preference number: 3 (lower is better) Translates to: QALASLGWWGRP*SGLEAVHRTTV Trigger: GACAGTGGTCCTATGAACAGCCTCCAGACCTGATCACGGTCTTCCCCACCACCCCAGGGAAGCCAAAGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR GCA 72 bp | CTGGTGCCACTCCGAGCATCCTCTGGGGTTAGAGCCTaGCCAAGTGCACTGTGTATGACAGTGACTCTGGGT | + |
Preference number: 3 (lower is better) Translates to: LVPLRASSGVRA*PSALCMTVTLG Trigger: ACCCAGAGTCACTGTCATACACAGTGCACTTGGGCAGGCTCTAACCCCAGAGGATGCTCGGAGTGGCACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 72 bp | CTTCCCTGGGGTGGTGGGGAAGACCGTGATCAGGTCTaGAGGCTGTTCATAGGACCACTGTCCCAACAACCA | + |
Preference number: 3 (lower is better) Translates to: LPWGGGEDRDQV*RLFIGPLSQQP Trigger: TGGTTGTTGGGACAGTGGTCCTATGAACAGCCTCCAGACCTGATCACGGTCTTCCCCACCACCCCAGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CAA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCTGGATGGATGCCTCTaGGCAGGCATGGGAATCATG | + |
Preference number: 3 (lower is better) Translates to: ETRVGWGNDGDQSQEQKALDGCL*AGMGIM Trigger: CATGATTCCCATGCCTGCCAAGAGGCATCCATCCAG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR GCA 72 bp | GACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATaGCTCTTGGCAGGCATGGGAATCATGAGATTGTGT | + |
Preference number: 3 (lower is better) Translates to: DLRAVAGPYLDG*LLAGMGIMRLC Trigger: ACACAATCTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 72 bp | GTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGGTaGTACCTGCCATCTCTGGTGCCACTCCGAGCATCC | + |
Preference number: 3 (lower is better) Translates to: VAVSSNRQLESG*YLPSLVPLRAS Trigger: GGATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 72 bp | TCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATaGATGCCTCTTGGCAGGCATGGGAATCATGAGATT | + |
Preference number: 3 (lower is better) Translates to: SRPKGCGWALPG*MPLGRHGNHEI Trigger: AATCTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 72 bp | GACCAATCACAAGAGCAGAAGGCCGCCCGTGCGTGCTaGACACACAGCTACTTCTGCCTTTCACCATGGAAC | + |
Preference number: 3 (lower is better) Translates to: DQSQEQKAARAC*THSYFCLSPWN Trigger: GTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCCTTCTGCTCTTGTGATTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR TCA 72 bp | GAAGTAGACTGGGCCCTTTCAGGCGTCCCTGTGGATTaGGAGGGAGTAAGCTCTGCTGACTCCAGACCTAAG | + |
Preference number: 3 (lower is better) Translates to: EVDWALSGVPVD*EGVSSADSRPK Trigger: CTTAGGTCTGGAGTCAGCAGAGCTTACTCCCTCTCAATCCACAGGGACGCCTGAAAGGGCCCAGTCTACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR GCA 72 bp | AATGAGCCTTTATTAGGAGGAGGCAGGGGGCGTGTCTaGAGAGGGCGGTGGTCCGCAGAACAAGGGTTTAAA | + |
Preference number: 3 (lower is better) Translates to: NEPLLGGGRGRV*RGRWSAEQGFK Trigger: TTTAAACCCTTGTTCTGCGGACCACCGCCCTCTGCAGACACGCCCCCTGCCTCCTCCTAATAAAGGCTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 72 bp | AGCCAGGGAGGTCTGTCCCTTGTGAGGTGCATAAACTaGGCCTACAAGGGTTGGATGACAGGTGTATGGGAG | + |
Preference number: 3 (lower is better) Translates to: SQGGLSLVRCIN*AYKGWMTGVWE Trigger: CTCCCATACACCTGTCATCCAACCCTTGTAGGCCCAGTTTATGCACCTCACAAGGGACAGACCTCCCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
||
3UTR GCA 72 bp | GGGCTGCAATTCGTTCTAAGTGTGGAAGCCAGGGGTTaGAGTGAGCAGCAACAGACAACTAGAGTCAGGGTG | + |
Preference number: 3 (lower is better) Translates to: GLQFVLSVEARG*SEQQQTTRVRV Trigger: CACCCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAGAACGAATTGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
||
3UTR CCA 72 bp | CCCCGGTGCTGCCGTTCCAAGGAGCCAGAAGACTTTTaGTCTATGTCATTGCCACTTAGGAAGGGTGGAGAA | + |
Preference number: 3 (lower is better) Translates to: PRCCRSKEPEDF*SMSLPLRKGGE Trigger: TTCTCCACCCTTCCTAAGTGGCAATGACATAGACCAAAAGTCTTCTGGCTCCTTGGAACGGCAGCACCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
||
3UTR-3UTR CAA 90 bp | CTCAACAGCATTCAGGCTGACTCAGTGCATGGAGGTGTTTGTTACAGCCAGCATAGGCGTCCCTGTGGATaGAGAGGGAGTAAGCTCTGC | + |
Preference number: 3 (lower is better) Translates to: LNSIQADSVHGGVCYSQHRRPCG*RGSKLC Trigger: GCAGAGCTTACTCCCTCTCAATCCACAGGGACGCCT...ATGCTGGCTGTAACAAACACCTCCATGCACTGAGTCAGCCTGAATGCTGTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
||
3UTR GCA 72 bp | AAGGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTaGCTTTCACCATGGAACCAATTGTTAAGAGAATGG | + |
Preference number: 3 (lower is better) Translates to: KAARACWTHSYF*LSPWNQLLREW Trigger: CCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR GCA 72 bp | GTGTTTGTTACAGCCAGCATTTACAATCCTTACTACTaGCTGGGGCAAGCTTTGGCTTCCCTGGGGTGGTGG | + |
Preference number: 3 (lower is better) Translates to: VFVTASIYNPYY*LGQALASLGWW Trigger: CCACCACCCCAGGGAAGCCAAAGCTTGCCCCAGGCAGTAGTAAGGATTGTAAATGCTGGCTGTAACAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
||
3UTR CCA 72 bp | CCTAACTGTACTGTGTCAAGGGAAACCAGGGTTGGATaGGGAAACGACGGCGACCAATCACAAGAGCAGAAG | + |
Preference number: 3 (lower is better) Translates to: PNCTVSRETRVG*GNDGDQSQEQK Trigger: CTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTCCCTTGACACAGTACAGTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CCA 72 bp | TTGTTACAGCCAGCATTTACAATCCTTACTACTGCCTaGGGCAAGCTTTGGCTTCCCTGGGGTGGTGGGGAA | + |
Preference number: 3 (lower is better) Translates to: LLQPAFTILTTA*GKLWLPWGGGE Trigger: TTCCCCACCACCCCAGGGAAGCCAAAGCTTGCCCCAGGCAGTAGTAAGGATTGTAAATGCTGGCTGTAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR TCA 72 bp | ATGGAGGATTTCCACACAGGTGAGCATGGAGTTAAATaGGCCTTTATTAGGAGGAGGCAGGGGGCGTGTCTG | + |
Preference number: 3 (lower is better) Translates to: MEDFHTGEHGVK*AFIRRRQGACL Trigger: CAGACACGCCCCCTGCCTCCTCCTAATAAAGGCTCATTTAACTCCATGCTCACCTGTGTGGAAATCCTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
||
3UTR-3UTR CAA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAACCTAGACCAAGGGCCTaGGGAGAGAAGAGGGCCTGT | + |
Preference number: 3 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKPRPRA*GEKRAC Trigger: ACAGGCCCTCTTCTCTCCCAAGGCCCTTGGTCTAGG...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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3UTR TCA 72 bp | ACCAGAGCCACTGATGTGTTGCCTCTGGGAAATCAATaGAGTAGGAACCATCACCTCCATCTTCACCTCCCA | + |
Preference number: 3 (lower is better) Translates to: TRATDVLPLGNQ*SRNHHLHLHLP Trigger: TGGGAGGTGAAGATGGAGGTGATGGTTCCTACTTCATTGATTTCCCAGAGGCAACACATCAGTGGCTCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
||
3UTR TCA 72 bp | CCTCAACTCAAGTGGAGGTCTTCATCCAGTTCTAGGTaGCATGGTCTGATCAGTGACTGCATAGGAATGAGG | + |
Preference number: 3 (lower is better) Translates to: PQLKWRSSSSSR*HGLISDCIGMR Trigger: CCTCATTCCTATGCAGTCACTGATCAGACCATGTCACCTAGAACTGGATGAAGACCTCCACTTGAGTTGAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
||
3UTR GCA 72 bp | CAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTaGTTGGCTCCTCCCTTCAAACCTGTCCCTAGCAGT | + |
Preference number: 3 (lower is better) Translates to: QKVWFDKYRCVL*LAPPFKPVPSS Trigger: ACTGCTAGGGACAGGTTTGAAGGGAGGAGCCAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
||
3UTR CCA 72 bp | ATAAACTGGGCCTACAAGGGTTGGATGACAGGTGTATaGGAGAAGTCACAAGACTTGGAAGTCTGGATGCAC | + |
Preference number: 3 (lower is better) Translates to: INWAYKGWMTGV*EKSQDLEVWMH Trigger: GTGCATCCAGACTTCCAAGTCTTGTGACTTCTCCCATACACCTGTCATCCAACCCTTGTAGGCCCAGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
||
3UTR CCA 72 bp | AGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTaGCTCCTCCCTTCAAACCTGTCCCTAGCAGTTAGT | + |
Preference number: 3 (lower is better) Translates to: RSGSTNTDVFCA*LLPSNLSLAVS Trigger: ACTAACTGCTAGGGACAGGTTTGAAGGGAGGAGCCAAGCACAGAACACATCTGTATTTGTCGAACCAGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR TCA 72 bp | CCCAATAAAACCCAAACTTCAACCTATAGATGGCCATaGAGAGGCAGAGACTGGGGAGCTAAGATGGGAAAA | + |
Preference number: 3 (lower is better) Translates to: PNKTQTSTYRWP*RGRDWGAKMGK Trigger: TTTTCCCATCTTAGCTCCCCAGTCTCTGCCTCTTCATGGCCATCTATAGGTTGAAGTTTGGGTTTTATTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR TCA 72 bp | TGTCATTGCCACTTAGGAAGGGTGGAGAACAGGAACTaGCTTGCCAGGCACAAAAATACTCAAGGACTAAGA | + |
Preference number: 3 (lower is better) Translates to: CHCHLGRVENRN*LARHKNTQGLR Trigger: TCTTAGTCCTTGAGTATTTTTGTGCCTGGCAAGTCAGTTCCTGTTCTCCACCCTTCCTAAGTGGCAATGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR GCA 72 bp | TTGCCACTTAGGAAGGGTGGAGAACAGGAACTGACTTaGCAGGCACAAAAATACTCAAGGACTAAGAAATGC | + |
Preference number: 3 (lower is better) Translates to: LPLRKGGEQELT*QAQKYSRTKKC Trigger: GCATTTCTTAGTCCTTGAGTATTTTTGTGCCTGGCAAGTCAGTTCCTGTTCTCCACCCTTCCTAAGTGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CCA 72 bp | ACAACCAAACCTAGGTCACACATCTGTCAAAAGGTCTaGTTCGACAAATACAGATGTGTTCTGTGCTTGGCT | + |
Preference number: 3 (lower is better) Translates to: TTKPRSHICQKV*FDKYRCVLCLA Trigger: AGCCAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGACAGATGTGTGACCTAGGTTTGGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR-3UTR CAA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAAATGGGAATCATGAGATaGTGTCCATCAAAAGAGAAA | + |
Preference number: 3 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKMGIMR*CPSKEK Trigger: TTTCTCTTTTGATGGACACAATCTCATGATTCCCAT...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTGGAGGCGGTGCCCTTaGCGGTGCCCACGACTCTCT | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVWRRCP*RCPRLS Trigger: AGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCA...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGCTGCCAAGCTTGGGCTaGCGAAGGCGAGGGTCCCAC | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLLPSLG*RRRGSH Trigger: GTGGGACCCTCGCCTTCGTCAGCCCAAGCTTGGCAG...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGGTACCCACACCCTGCTaGAGCAGGCGCTGCTCCATC | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVVPTPC*SRRCSI Trigger: GATGGAGCAGCGCCTGCTGCAGCAGGGTGTGGGTAC...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCATGGAGGCGGTGCCCTTaGCGGTGCCCACGACTCTCT | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPWRRCP*RCPRLS Trigger: AGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCA...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCACTCGGGACAGCTGGCTaGAAGCGGCAAGGGCTCCAG | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPLGTAG*KRQGLQ Trigger: CTGGAGCCCTTGCCGCTTCCAGCCAGCTGTCCCGAG...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR TCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGACACGGGCCTCTCCTaGGCGGAACGCCAACTTACG | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLDTGLS*AERQLT Trigger: CGTAAGTTGGCGTTCCGCTCAGGAGAGGCCCGTGTC...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTGCTGCAGCAGGCGCTaGTCCATCTCCTGCTCTTGC | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVCCSRR*SISCSC Trigger: GCAAGAGCAGGAGATGGAGCAGCGCCTGCTGCAGCA...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGGCGTCTTTTTCCAGTTaGAGGCGGTGCCCTTGCCGG | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVASFSS*RRCPCR Trigger: CCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGC...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGCTGCAGGCTCAGCCTTaGTGCTGGCAGTACCCACAC | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLLQAQP*CWQYPH Trigger: GTGTGGGTACTGCCAGCATCAAGGCTGAGCCTGCAG...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGCGAGGGTCCCACCTGTaGTCAGAGGCGTCTTTTTCC | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVRGSHL*SEASFS Trigger: GGAAAAAGACGCCTCTGAGCACAGGTGGGACCCTCG...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAACCCACCTCGGACCAGTaGTGGTGGGATGATGCTGCC | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQPTSDQ*WWDDAA Trigger: GGCAGCATCATCCCACCACCACTGGTCCGAGGTGGG...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGCGTCTTTTTCCAGTTaGAGGCGGTGCCCTTGCCGG | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLASFSS*RRCPCR Trigger: CCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGC...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CAA 72 bp | GCTAGGAGGCAGTCTGTGTGTCCTAGACCAAGGGCCTaGGGAGAGAAGAGGGCCTGTCCTCGGCTGGGCCGG | + |
Preference number: 4 (lower is better) Translates to: ARRQSVCPRPRA*GEKRACPRLGR Trigger: CCGGCCCAGCCGAGGACAGGCCCTCTTCTCTCCCAAGGCCCTTGGTCTAGGACACACAGACTGCCTCCTAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCACGAGTGGAGGAGGTCTaGAGTGAGGTCTTGCCAGCA | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPRVEEV*SEVLPA Trigger: TGCTGGCAAGACCTCACTTCAGACCTCCTCCACTCG...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTACTGCCAAGCTTGGGCTaGCGAAGGCGAGGGTCCCAC | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLLPSLG*RRRGSH Trigger: GTGGGACCCTCGCCTTCGTCAGCCCAAGCTTGGCAG...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTTCAGGCGACTGGTGTaGTCCACCTTGAGTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVFRRLV*STLSAF Trigger: GAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAA...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAATGCTGCAGCAGGCGCTaGTCCATCTCCTGCTCTTGC | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQCCSRR*SISCSC Trigger: GCAAGAGCAGGAGATGGAGCAGCGCCTGCTGCAGCA...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCACGTGGGATGTGGAGCTaGAGGCTCAGCCTTGATGCT | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPRGMWS*RLSLDA Trigger: AGCATCAAGGCTGAGCCTGCAGCTCCACATCCCACG...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAACCTGTGGTCCCAGTTTaGCAGACACCTGCTGCCCAC | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQPVVPV*QTPAAH Trigger: GTGGGCAGCAGGTGTCTGCCAAACTGGGACCACAGG...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGCAGGGGGCTTGGGTaGGGGGATCTCCAGCAGTGT | + |
Preference number: 4 (lower is better) Translates to: KENEIPAQLREPPVPAWPGRGLG*GDLQQC Trigger: ACACTGCTGGAGATCCCCCCACCCAAGCCCCCTGCC...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAACTCGGGACAGCTGGCTaGAAGCCTGTAGTGAGGACC | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQLGTAG*KPVVRT Trigger: GGTCCTCACTACAGGCTTCCAGCCAGCTGTCCCGAG...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GACTTCTGGCTGAGAGGCCACCCCGGTGCTGCCGTTCCAAGGAGCCAGAAGACTGAGCCTCGGGACAGCTaGCTGGAAGCGGCAAGGGCT | + |
Preference number: 4 (lower is better) Translates to: DFWLRGHPGAAVPRSQKTEPRDS*LEAARA Trigger: AGCCCTTGCCGCTTCCAGCCAGCTGTCCCGAGGCTC...AGTCTTCTGGCTCCTTGGAACGGCAGCACCGGGGTGGCCTCTCAGCCAGAAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR TCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAGGTCACAGTGCTCCCTaGGGAAGCTGTAGGCTTCTG | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQGHSAP*GSCRLL Trigger: CAGAAGCCTACAGCTTCCTCAGGGAGCACTGTGACC...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTGGTGTGCTCCACCTTaGGTGCCTTCTTTTGGTTGG | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVWCAPP*VPSFGW Trigger: CCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCA...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCAACGAGGTGCTGTGGCTaGGCCTCGGGACAGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPTRCCG*ASGQLA Trigger: AGCCAGCTGTCCCGAGGCTCAGCCACAGCACCTCGT...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
||
CDS-3UTR TCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCACTGCCAAGCTTGGGCTaGCGAAGGCGAGGGTCCCAC | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPLPSLG*RRRGSH Trigger: GTGGGACCCTCGCCTTCGTCAGCCCAAGCTTGGCAG...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCACTATTTCCATGTGGCTaGTTGGGGGATGGAGCGTGG | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPLFPCG*LGDGAW Trigger: CCACGCTCCATCCCCCAATCAGCCACATGGAAATAG...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGAGTGTCTTCTCCAGCTaGTTGCGCAGTGCTAGCTTG | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVSVFSS*LRSASL Trigger: CAAGCTAGCACTGCGCAAGCAGCTGGAGAAGACACT...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGCGCTGCTCCATCTCCTaGTCTTGCTGTAGAGCCTTC | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLRCSIS*SCCRAF Trigger: GAAGGCTCTACAGCAAGAGCAGGAGATGGAGCAGCG...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGGACTGGCTGAAAGTGTaGAGAACACCACGAGGTGCT | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVDWLKV*RTPRGA Trigger: AGCACCTCGTGGTGTTCTGCACACTTTCAGCCAGTC...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAGCCTGCACTCGGCTCTaGCATCACCCTGCTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLACTRL*HHPAVS Trigger: GGAGACAGCAGGGTGATGCCAGAGCCGAGTGCAGGC...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTACAGGAGGAGGGGTGGTaGCCCCGTAGAGGAATGCTG | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLQEEGW*PRRGML Trigger: CAGCATTCCTCTACGGGGCCACCACCCCTCCTCCTG...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCACAAGCAGACTGGTGTTaGGGACATTGGCGACACGGA | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPQADWC*GHWRHG Trigger: TCCGTGTCGCCAATGTCCCCAACACCAGTCTGCTTG...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGTTGGGGGATGGAGCGTaGAGGAATCATGTCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLLGDGA*RNHVQE Trigger: CTCCTGGACATGATTCCTCCACGCTCCATCCCCCAA...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGATGATCCTCTGTCCCTaGATCTGCATGCTGGGCACT | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLMILCP*ICMLGT Trigger: AGTGCCCAGCATGCAGATTCAGGGACAGAGGATCAT...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAGAGGCTGCAGTAGGCTaGGGGATGTTGACAAGCAGA | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQEAAVG*GMLTSR Trigger: TCTGCTTGTCAACATCCCTCAGCCTACTGCAGCCTC...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCAGGAGTGGAATTTGCCTaGGCAGAAGCAACTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPGVEFA*AEATAV Trigger: GACAGCAGTTGCTTCTGCTCAGGCAAATTCCACTCC...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGTGGTGTGCTCCACCTTaGGTGCCTTCTTTTGGTTGG | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLWCAPP*VPSFGW Trigger: CCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCA...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTTTGGGTGACTGGCTaGAAGTGTGCAGAACACCAC | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLVWVTG*KCAEHH Trigger: GTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAAC...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAACTATTTCCATGTGGCTaGTTGGGGGATGGAGCGTGG | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQLFPCG*LGDGAW Trigger: CCACGCTCCATCCCCCAATCAGCCACATGGAAATAG...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAATGTCACTGTGTGAAGTaGGCATGTCCACAGGCCCGT | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQCHCVK*ACPQAR Trigger: ACGGGCCTGTGGACATGCGCACTTCACACAGTGACA...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCGTCCCTGAATCTGCATaGTGGGCACTGAGGCACGGG | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCVPESA*WALRHG Trigger: CCCGTGCCTCAGTGCCCAGCATGCAGATTCAGGGAC...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCAACACGGATAAGTCCCTaGTGGATGATCCTCTGTCCC | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPTRISP*WMILCP Trigger: GGGACAGAGGATCATCCAGCAGGGACTTATCCGTGT...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCAAGTGTCTTCTCCAGCTaGTTGCGCAGTGCTAGCTTG | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPSVFSS*LRSASL Trigger: CAAGCTAGCACTGCGCAAGCAGCTGGAGAAGACACT...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGGCAGAAATCCTGCCTaGTTGTGTCTCCAGCAGGTT | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLGRNPA*LCLQQV Trigger: AACCTGCTGGAGACACAAGCAGGCAGGATTTCTGCC...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCACAGTGGCAGAAATCCTaGCTGCTTGTGTCTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPQWQKS*LLVSPA Trigger: TGCTGGAGACACAAGCAGGCAGGATTTCTGCCACTG...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAACGCTGCTCCATCTCCTaGTCTTGCTGTAGAGCCTTC | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQRCSIS*SCCRAF Trigger: GAAGGCTCTACAGCAAGAGCAGGAGATGGAGCAGCG...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAGCTGAGGCTGCATTCTaGAGTTTGGGTGACTGGCTG | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQAEAAF*SLGDWL Trigger: CAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGC...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGCTTTCAAGGCTACTGTaGTCAGGCCATTCACCCTTG | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVLSRLL*SGHSPL Trigger: CAAGGGTGAATGGCCTGACCACAGTAGCCTTGAAAG...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTACCAGCAGGAATGTTCTaGGTACCCCGCACGAGTGGG | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLPAGMF*VPRTSG Trigger: CCCACTCGTGCGGGGTACCCAGAACATTCCTGCTGG...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGGGCAGGGGGCTTGGGTaGGGGGATCTCCAGCAGTGT | + |
Preference number: 4 (lower is better) Translates to: CGWALPGWMPLGRHGNHEGRGLG*GDLQQC Trigger: ACACTGCTGGAGATCCCCCCACCCAAGCCCCCTGCC...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCCTCGGGACAGCTGGCTaGAAGCCTGTAGTGAGGACC | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCLGTAG*KPVVRT Trigger: GGTCCTCACTACAGGCTTCCAGCCAGCTGTCCCGAG...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAGCGTCTTTTTCCAGTTaGAGGCGGTGCCCTTGCCGG | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLASFSS*RRCPCR Trigger: CCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGC...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGTGGCTGATTGGGGGATaGAGCGTGGAGGAATCATGT | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLWLIGG*SVEESC Trigger: ACATGATTCCTCCACGCTCCATCCCCCAATCAGCCA...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAACCTCCTTCAGCTGCTTaGTCATCCGCTCTCGTTCTT | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQPPSAA*SSALVL Trigger: AAGAACGAGAGCGGATGATCAAGCAGCTGAAGGAGG...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCCGAGTGGAGGAGGTCTaGAGTGAGGTCTTGCCAGCA | + |
Preference number: 4 (lower is better) Translates to: KENEIPAQLREPPVPAWPRVEEV*SEVLPA Trigger: TGCTGGCAAGACCTCACTTCAGACCTCCTCCACTCG...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTACGAGTGGAGGAGGTCTaGAGTGAGGTCTTGCCAGCA | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLRVEEV*SEVLPA Trigger: TGCTGGCAAGACCTCACTTCAGACCTCCTCCACTCG...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCACTGCAGGCTCAGCCTTaGTGCTGGCAGTACCCACAC | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPLQAQP*CWQYPH Trigger: GTGTGGGTACTGCCAGCATCAAGGCTGAGCCTGCAG...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCACGAGGTGCTGTGGCTaGGCCTCGGGACAGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSITRCCG*ASGQLA Trigger: AGCCAGCTGTCCCGAGGCTCAGCCACAGCACCTCGT...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAGGGTGCGCTTCTGACTaGGGGTTCGGCATGCTTCTT | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLGCASD*GFGMLL Trigger: AAGAAGCATGCCGAACCCGCAGTCAGAAGCGCACCC...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCAGTCCCTGAATCTGCATaGTGGGCACTGAGGCACGGG | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPVPESA*WALRHG Trigger: CCCGTGCCTCAGTGCCCAGCATGCAGATTCAGGGAC...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | ACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCCATCTCCTGCTCTTaGTGTAGAGCCTTCACAAAG | + |
Preference number: 4 (lower is better) Translates to: TKSRLNFGSPRCQPGPGVSISCS*CRAFTK Trigger: CTTTGTGAAGGCTCTACAGCAAGAGCAGGAGATGGA...CACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGGTACCCACACCCTGCTaGAGCAGGCGCTGCTCCATC | + |
Preference number: 4 (lower is better) Translates to: CGWALPGWMPLGRHGNHEVPTPC*SRRCSI Trigger: GATGGAGCAGCGCCTGCTGCAGCAGGGTGTGGGTAC...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCCGTGGGATGTGGAGCTaGAGGCTCAGCCTTGATGCT | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCRGMWS*RLSLDA Trigger: AGCATCAAGGCTGAGCCTGCAGCTCCACATCCCACG...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAGACTGGCTGAAAGTGTaGAGAACACCACGAGGTGCT | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQDWLKV*RTPRGA Trigger: AGCACCTCGTGGTGTTCTGCACACTTTCAGCCAGTC...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCTGGAGGCGGTGCCCTTaGCGGTGCCCACGACTCTCT | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSIWRRCP*RCPRLS Trigger: AGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCA...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGCAGGAGGAGGGGTGGTaGCCCCGTAGAGGAATGCTG | + |
Preference number: 4 (lower is better) Translates to: CGWALPGWMPLGRHGNHEQEEGW*PRRGML Trigger: CAGCATTCCTCTACGGGGCCACCACCCCTCCTCCTG...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTAGGCAGGGGGCTTGGGTaGGGGGATCTCCAGCAGTGT | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLGRGLG*GDLQQC Trigger: ACACTGCTGGAGATCCCCCCACCCAAGCCCCCTGCC...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCGGCAGGGGGCTTGGGTaGGGGGATCTCCAGCAGTGT | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSIGRGLG*GDLQQC Trigger: ACACTGCTGGAGATCCCCCCACCCAAGCCCCCTGCC...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTACAAGAAGTTCATCTCTaGGGCAGGGGGCTTGGGTGG | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLQEVHL*GRGLGW Trigger: CCACCCAAGCCCCCTGCCCCAGAGATGAACTTCTTG...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GACTTCTGGCTGAGAGGCCACCCCGGTGCTGCCGTTCCAAGGAGCCAGAAGACTCTTCAGCGTGGGATGTaGAGCTGCAGGCTCAGCCTT | + |
Preference number: 4 (lower is better) Translates to: DFWLRGHPGAAVPRSQKTLQRGM*SCRLSL Trigger: AAGGCTGAGCCTGCAGCTCCACATCCCACGCTGAAG...AGTCTTCTGGCTCCTTGGAACGGCAGCACCGGGGTGGCCTCTCAGCCAGAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTACTTCAGCGTGGGATGTaGAGCTGCAGGCTCAGCCTT | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLLQRGM*SCRLSL Trigger: AAGGCTGAGCCTGCAGCTCCACATCCCACGCTGAAG...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCACTCGGGACAGCTGGCTaGAAGCCTGTAGTGAGGACC | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPLGTAG*KPVVRT Trigger: GGTCCTCACTACAGGCTTCCAGCCAGCTGTCCCGAG...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGAGGAGGTCTGAAGTaGGGTCTTGCCAGCAGGAAT | + |
Preference number: 4 (lower is better) Translates to: KENEIPAQLREPPVPAWPGGGLK*GLASRN Trigger: ATTCCTGCTGGCAAGACCTCACTTCAGACCTCCTCC...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCGAGGCTGCAGTAGGCTaGGGGATGTTGACAAGCAGA | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCEAAVG*GMLTSR Trigger: TCTGCTTGTCAACATCCCTCAGCCTACTGCAGCCTC...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCGACACGGGCCTCTCCTaGGCGGAACGCCAACTTACG | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSIDTGLS*AERQLT Trigger: CGTAAGTTGGCGTTCCGCTCAGGAGAGGCCCGTGTC...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCAGGGTGCGCTTCTGACTaGGGGTTCGGCATGCTTCTT | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPGCASD*GFGMLL Trigger: AAGAAGCATGCCGAACCCGCAGTCAGAAGCGCACCC...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCCGCTGCTCCATCTCCTaGTCTTGCTGTAGAGCCTTC | + |
Preference number: 4 (lower is better) Translates to: KENEIPAQLREPPVPAWPRCSIS*SCCRAF Trigger: GAAGGCTCTACAGCAAGAGCAGGAGATGGAGCAGCG...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCGCTGAGGCTGCATTCTaGAGTTTGGGTGACTGGCTG | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCAEAAF*SLGDWL Trigger: CAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGC...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCCTCTCTCGGAATGTCTaGCAGTCCTGCTTACCAGGG | + |
Preference number: 4 (lower is better) Translates to: KENEIPAQLREPPVPAWPLSRNV*QSCLPG Trigger: CCCTGGTAAGCAGGACTGGCAGACATTCCGAGAGAG...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGTGGAGGCGGTGCCCTTaGCGGTGCCCACGACTCTCT | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRWRRCP*RCPRLS Trigger: AGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCA...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCGCCTGCACTCGGCTCTaGCATCACCCTGCTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAACTRL*HHPAVS Trigger: GGAGACAGCAGGGTGATGCCAGAGCCGAGTGCAGGC...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCCCCACCTCGGACCAGTaGTGGTGGGATGATGCTGCC | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSIPTSDQ*WWDDAA Trigger: GGCAGCATCATCCCACCACCACTGGTCCGAGGTGGG...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCCAAGCAGACTGGTGTTaGGGACATTGGCGACACGGA | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCQADWC*GHWRHG Trigger: TCCGTGTCGCCAATGTCCCCAACACCAGTCTGCTTG...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCACCACGAGGTGCTGTaGCTGAGCCTCGGGACAGCT | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAHHEVL*LSLGTA Trigger: AGCTGTCCCGAGGCTCAGCCACAGCACCTCGTGGTG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCCACCACGAGGTGCTGTaGCTGAGCCTCGGGACAGCT | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSIHHEVL*LSLGTA Trigger: AGCTGTCCCGAGGCTCAGCCACAGCACCTCGTGGTG...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCATGCAGTTTGGGTGACTaGCTGAAAGTGTGCAGAACA | + |
Preference number: 4 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPCSLGD*LKVCRT Trigger: TGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCA...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCTTGGGGGATGGAGCGTaGAGGAATCATGTCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: KENEIPAQLREPPVPAWPLGDGA*RNHVQE Trigger: CTCCTGGACATGATTCCTCCACGCTCCATCCCCCAA...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTACCTCCTTCAGCTGCTTaGTCATCCGCTCTCGTTCTT | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLPPSAA*SSALVL Trigger: AAGAACGAGAGCGGATGATCAAGCAGCTGAAGGAGG...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GACTTCTGGCTGAGAGGCCACCCCGGTGCTGCCGTTCCAAGGAGCCAGAAGACTCCTCCTTCAGCTGCTTaGTCATCCGCTCTCGTTCTT | + |
Preference number: 4 (lower is better) Translates to: DFWLRGHPGAAVPRSQKTPPSAA*SSALVL Trigger: AAGAACGAGAGCGGATGATCAAGCAGCTGAAGGAGG...AGTCTTCTGGCTCCTTGGAACGGCAGCACCGGGGTGGCCTCTCAGCCAGAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR TCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCAGAGGCTGCAGTAGGCTaGGGGATGTTGACAAGCAGA | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPEAAVG*GMLTSR Trigger: TCTGCTTGTCAACATCCCTCAGCCTACTGCAGCCTC...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCGGAGTGGAATTTGCCTaGGCAGAAGCAACTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCGVEFA*AEATAV Trigger: GACAGCAGTTGCTTCTGCTCAGGCAAATTCCACTCC...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGACGAGGTGCTGTGGCTaGGCCTCGGGACAGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRTRCCG*ASGQLA Trigger: AGCCAGCTGTCCCGAGGCTCAGCCACAGCACCTCGT...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAGTTTGGGTGACTGGCTaGAAGTGTGCAGAACACCAC | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLVWVTG*KCAEHH Trigger: GTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAAC...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCACTATTTCCATGTGGCTaGTTGGGGGATGGAGCGTGG | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPLFPCG*LGDGAW Trigger: CCACGCTCCATCCCCCAATCAGCCACATGGAAATAG...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTATTGGCAGACACCTGCTaGCCACCTCGGACCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLLADTC*PPRTSG Trigger: ACCACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAA...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCGTCCCTGAATCTGCATaGTGGGCACTGAGGCACGGG | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAVPESA*WALRHG Trigger: CCCGTGCCTCAGTGCCCAGCATGCAGATTCAGGGAC...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCGGTGGGAGTGGAATTTaGCTGAGCAGAAGCAACTGC | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCGGSGI*LSRSNC Trigger: GCAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACC...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAGGTGGGAGTGGAATTTaGCTGAGCAGAAGCAACTGC | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLGGSGI*LSRSNC Trigger: GCAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACC...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCCAGTGGCAGAAATCCTaGCTGCTTGTGTCTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: KENEIPAQLREPPVPAWPQWQKS*LLVSPA Trigger: TGCTGGAGACACAAGCAGGCAGGATTTCTGCCACTG...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCATTCAGGCGACTGGTGTaGTCCACCTTGAGTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPFRRLV*STLSAF Trigger: GAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAA...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCACGCTGCTCCATCTCCTaGTCTTGCTGTAGAGCCTTC | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPRCSIS*SCCRAF Trigger: GAAGGCTCTACAGCAAGAGCAGGAGATGGAGCAGCG...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGGTACCCACACCCTGCTaGAGCAGGCGCTGCTCCATC | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRVPTPC*SRRCSI Trigger: GATGGAGCAGCGCCTGCTGCAGCAGGGTGTGGGTAC...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGCGTGGGATGTGGAGCTaGAGGCTCAGCCTTGATGCT | + |
Preference number: 4 (lower is better) Translates to: CGWALPGWMPLGRHGNHERGMWS*RLSLDA Trigger: AGCATCAAGGCTGAGCCTGCAGCTCCACATCCCACG...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCGACTGGCTGAAAGTGTaGAGAACACCACGAGGTGCT | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCDWLKV*RTPRGA Trigger: AGCACCTCGTGGTGTTCTGCACACTTTCAGCCAGTC...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGCGAGGGTCCCACCTGTaGTCAGAGGCGTCTTTTTCC | + |
Preference number: 4 (lower is better) Translates to: CGWALPGWMPLGRHGNHERGSHL*SEASFS Trigger: GGAAAAAGACGCCTCTGAGCACAGGTGGGACCCTCG...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGCAGGAGGAGGGGTGGTaGCCCCGTAGAGGAATGCTG | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRQEEGW*PRRGML Trigger: CAGCATTCCTCTACGGGGCCACCACCCCTCCTCCTG...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCCCACACTGGTGGGAGTaGAATTTGCCTGAGCAGAAG | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCPHWWE*NLPEQK Trigger: CTTCTGCTCAGGCAAATTCCACTCCCACCAGTGTGG...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCCCACAGAAGCCACACTaGTGGGAGTGGAATTTGCCT | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCPQKPH*WEWNLP Trigger: AGGCAAATTCCACTCCCACCAGTGTGGCTTCTGTGG...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGCAAGAAGTTCATCTCTaGGGCAGGGGGCTTGGGTGG | + |
Preference number: 4 (lower is better) Translates to: CGWALPGWMPLGRHGNHEQEVHL*GRGLGW Trigger: CCACCCAAGCCCCCTGCCCCAGAGATGAACTTCTTG...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAATGCAGTTTGGGTGACTaGCTGAAAGTGTGCAGAACA | + |
Preference number: 4 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQCSLGD*LKVCRT Trigger: TGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCA...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTAGCGTCTTTTTCCAGTTaGAGGCGGTGCCCTTGCCGG | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLASFSS*RRCPCR Trigger: CCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGC...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
||
CDS-3UTR TCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCGAGTGGAGGAGGTCTaGAGTGAGGTCTTGCCAGCA | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKARVEEV*SEVLPA Trigger: TGCTGGCAAGACCTCACTTCAGACCTCCTCCACTCG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCAATGATCCTCTGTCCCTaGATCTGCATGCTGGGCACT | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPMILCP*ICMLGT Trigger: AGTGCCCAGCATGCAGATTCAGGGACAGAGGATCAT...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCATTCTGCAGTTTGGGTaGCTGGCTGAAAGTGTGCAG | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCILQFG*LAESVQ Trigger: CTGCACACTTTCAGCCAGTCACCCAAACTGCAGAAT...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGTTGGCAGACACCTGCTaGCCACCTCGGACCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRLADTC*PPRTSG Trigger: ACCACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAA...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCAGTTTGGCAGACACCTaGTGCCCACCTCGGACCAGT | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSISLADT*CPPRTS Trigger: ACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAAACT...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTAAGTTTGGCAGACACCTaGTGCCCACCTCGGACCAGT | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLSLADT*CPPRTS Trigger: ACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAAACT...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCAACACGGATAAGTCCCTaGTGGATGATCCTCTGTCCC | + |
Preference number: 4 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPTRISP*WMILCP Trigger: GGGACAGAGGATCATCCAGCAGGGACTTATCCGTGT...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCTGGAGACTCAGCAGATaGAACCACAGAAGCCACACT | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCWRLSR*NHRSHT Trigger: AGTGTGGCTTCTGTGGTTGCATCTGCTGAGTCTCCA...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CCACCCCGGTGCTGCCGTTCCAAGGAGCCAGAAGACTTTTGGTCTATGTCATTGTGCTGCAGCAGGCGCTaGTCCATCTCCTGCTCTTGC | + |
Preference number: 4 (lower is better) Translates to: PPRCCRSKEPEDFWSMSLCCSRR*SISCSC Trigger: GCAAGAGCAGGAGATGGAGCAGCGCCTGCTGCAGCA...CAATGACATAGACCAAAAGTCTTCTGGCTCCTTGGAACGGCAGCACCGGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTACGAGGGTCCCACCTGTaGTCAGAGGCGTCTTTTTCC | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLRGSHL*SEASFS Trigger: GGAAAAAGACGCCTCTGAGCACAGGTGGGACCCTCG...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAAGCCTGCACTCGGCTCTaGCATCACCCTGCTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: GPKVRVSAGVGQTKGKKEACTRL*HHPAVS Trigger: GGAGACAGCAGGGTGATGCCAGAGCCGAGTGCAGGC...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTACTTTCAAGGCTACTGTaGTCAGGCCATTCACCCTTG | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLLSRLL*SGHSPL Trigger: CAAGGGTGAATGGCCTGACCACAGTAGCCTTGAAAG...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCCTTTCAAGGCTACTGTaGTCAGGCCATTCACCCTTG | + |
Preference number: 4 (lower is better) Translates to: KENEIPAQLREPPVPAWPLSRLL*SGHSPL Trigger: CAAGGGTGAATGGCCTGACCACAGTAGCCTTGAAAG...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGCCAGCAGGAATGTTCTaGGTACCCCGCACGAGTGGG | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRPAGMF*VPRTSG Trigger: CCCACTCGTGCGGGGTACCCAGAACATTCCTGCTGG...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGCCTGTGGTCCCAGTTTaGCAGACACCTGCTGCCCAC | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRPVVPV*QTPAAH Trigger: GTGGGCAGCAGGTGTCTGCCAAACTGGGACCACAGG...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGCAGGAGGAGGGGTGGTaGCCCCGTAGAGGAATGCTG | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRQEEGW*PRRGML Trigger: CAGCATTCCTCTACGGGGCCACCACCCCTCCTCCTG...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCAAGAAGTTCATCTCTaGGGCAGGGGGCTTGGGTGG | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAQEVHL*GRGLGW Trigger: CCACCCAAGCCCCCTGCCCCAGAGATGAACTTCTTG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGTTGAGTGCCTTCTTTTaGTTGGATGTCATGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: APTHAGQAELAPRSEFLLLSAFF*LDVMQF Trigger: GAACTGCATGACATCCAACCAAAAGAAGGCACTCAA...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCTTCAGCGTGGGATGTaGAGCTGCAGGCTCAGCCTT | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKALQRGM*SCRLSL Trigger: AAGGCTGAGCCTGCAGCTCCACATCCCACGCTGAAG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTAGTGTACTGCCAAGCTTaGGCTGACGAAGGCGAGGGT | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLVYCQA*ADEGEG Trigger: ACCCTCGCCTTCGTCAGCCCAAGCTTGGCAGTACAC...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGTTGGGGGATGGAGCGTaGAGGAATCATGTCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: CGWALPGWMPLGRHGNHELGDGA*RNHVQE Trigger: CTCCTGGACATGATTCCTCCACGCTCCATCCCCCAA...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGCTGCAGGCTCAGCCTTaGTGCTGGCAGTACCCACAC | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRLQAQP*CWQYPH Trigger: GTGTGGGTACTGCCAGCATCAAGGCTGAGCCTGCAG...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCTATTTCCATGTGGCTaGTTGGGGGATGGAGCGTGG | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKALFPCG*LGDGAW Trigger: CCACGCTCCATCCCCCAATCAGCCACATGGAAATAG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGAGTGTCTTCTCCAGCTaGTTGCGCAGTGCTAGCTTG | + |
Preference number: 4 (lower is better) Translates to: CGWALPGWMPLGRHGNHESVFSS*LRSASL Trigger: CAAGCTAGCACTGCGCAAGCAGCTGGAGAAGACACT...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCTCCATCTCCTGCTCTTaGTGTAGAGCCTTCACAAAG | + |
Preference number: 4 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCSISCS*CRAFTK Trigger: CTTTGTGAAGGCTCTACAGCAAGAGCAGGAGATGGA...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTATCCATCTCCTGCTCTTaGTGTAGAGCCTTCACAAAG | + |
Preference number: 4 (lower is better) Translates to: GQAELAPRSEFLLVSGKLSISCS*CRAFTK Trigger: CTTTGTGAAGGCTCTACAGCAAGAGCAGGAGATGGA...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTACTCTCTCGGAATGTCTaGCAGTCCTGCTTACCAGGG | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLLSRNV*QSCLPG Trigger: CCCTGGTAAGCAGGACTGGCAGACATTCCGAGAGAG...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGCGAGGGTCCCACCTGTaGTCAGAGGCGTCTTTTTCC | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRRGSHL*SEASFS Trigger: GGAAAAAGACGCCTCTGAGCACAGGTGGGACCCTCG...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGCCAGCAGGAATGTTCTaGGTACCCCGCACGAGTGGG | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRPAGMF*VPRTSG Trigger: CCCACTCGTGCGGGGTACCCAGAACATTCCTGCTGG...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGCCTGTGGTCCCAGTTTaGCAGACACCTGCTGCCCAC | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRPVVPV*QTPAAH Trigger: GTGGGCAGCAGGTGTCTGCCAAACTGGGACCACAGG...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTATTGAGAGCTGGCCTGTaGTCCCAGTTTGGCAGACAC | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLLRAGL*SQFGRH Trigger: GTGTCTGCCAAACTGGGACCACAGGCCAGCTCTCAA...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCTTGAGAGCTGGCCTGTaGTCCCAGTTTGGCAGACAC | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSILRAGL*SQFGRH Trigger: GTGTCTGCCAAACTGGGACCACAGGCCAGCTCTCAA...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCCAAGCAGACTGGTGTTaGGGACATTGGCGACACGGA | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSIQADWC*GHWRHG Trigger: TCCGTGTCGCCAATGTCCCCAACACCAGTCTGCTTG...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTACAGCAGCTGCTGCAGTaGCAGAAATCCTGCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLQQLLQ*QKSCLL Trigger: AAGCAGGCAGGATTTCTGCCACTGCAGCAGCTGCTG...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCAGCAGCTGCTGCAGTaGCAGAAATCCTGCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAQQLLQ*QKSCLL Trigger: AAGCAGGCAGGATTTCTGCCACTGCAGCAGCTGCTG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCTTCCATGTGGCTGATTaGGGGATGGAGCGTGGAGGA | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAFHVAD*GMERGG Trigger: TCCTCCACGCTCCATCCCCCAATCAGCCACATGGAA...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CAA 72 bp | AGGGCTGTGGCTGGGCCCTACCTGGATGGATGCCTCTaGGCAGGCATGGGAATCATGAGATTGTGTCCATCA | + |
Preference number: 4 (lower is better) Translates to: RAVAGPYLDGCL*AGMGIMRLCPS Trigger: TGATGGACACAATCTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCATGATCCTCTGTCCCTaGATCTGCATGCTGGGCACT | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAMILCP*ICMLGT Trigger: AGTGCCCAGCATGCAGATTCAGGGACAGAGGATCAT...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCGTTTGGGTGACTGGCTaGAAGTGTGCAGAACACCAC | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAVWVTG*KCAEHH Trigger: GTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAAC...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAAAGTTTGGCAGACACCTaGTGCCCACCTCGGACCAGT | + |
Preference number: 4 (lower is better) Translates to: GPKVRVSAGVGQTKGKKESLADT*CPPRTS Trigger: ACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAAACT...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCACACGGATAAGTCCCTaGTGGATGATCCTCTGTCCC | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSITRISP*WMILCP Trigger: GGGACAGAGGATCATCCAGCAGGGACTTATCCGTGT...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCAGTGTCTTCTCCAGCTaGTTGCGCAGTGCTAGCTTG | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSISVFSS*LRSASL Trigger: CAAGCTAGCACTGCGCAAGCAGCTGGAGAAGACACT...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTAGGCAGAAATCCTGCCTaGTTGTGTCTCCAGCAGGTT | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLGRNPA*LCLQQV Trigger: AACCTGCTGGAGACACAAGCAGGCAGGATTTCTGCC...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCGGCAGAAATCCTGCCTaGTTGTGTCTCCAGCAGGTT | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSIGRNPA*LCLQQV Trigger: AACCTGCTGGAGACACAAGCAGGCAGGATTTCTGCC...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTACAGTGGCAGAAATCCTaGCTGCTTGTGTCTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLQWQKS*LLVSPA Trigger: TGCTGGAGACACAAGCAGGCAGGATTTCTGCCACTG...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGTTCAGGCGACTGGTGTaGTCCACCTTGAGTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRFRRLV*STLSAF Trigger: GAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAA...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGCGTGGGATGTGGAGCTaGAGGCTCAGCCTTGATGCT | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRRGMWS*RLSLDA Trigger: AGCATCAAGGCTGAGCCTGCAGCTCCACATCCCACG...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCGACTGGCTGAAAGTGTaGAGAACACCACGAGGTGCT | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKADWLKV*RTPRGA Trigger: AGCACCTCGTGGTGTTCTGCACACTTTCAGCCAGTC...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGCTCTCTCGGAATGTCTaGCAGTCCTGCTTACCAGGG | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRLSRNV*QSCLPG Trigger: CCCTGGTAAGCAGGACTGGCAGACATTCCGAGAGAG...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGCAGATCCTGTGCCCATaGCCTCTGTTGTCCTCAGCA | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRQILCP*PLLSSA Trigger: TGCTGAGGACAACAGAGGCCATGGGCACAGGATCTG...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTACCACACTGGTGGGAGTaGAATTTGCCTGAGCAGAAG | + |
Preference number: 4 (lower is better) Translates to: SNQLWLQHSGLSISLEPLPHWWE*NLPEQK Trigger: CTTCTGCTCAGGCAAATTCCACTCCCACCAGTGTGG...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCCACAGAAGCCACACTaGTGGGAGTGGAATTTGCCT | + |
Preference number: 4 (lower is better) Translates to: ETRVGWGNDGDQSQEQKAPQKPH*WEWNLP Trigger: AGGCAAATTCCACTCCCACCAGTGTGGCTTCTGTGG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAACTTCAGCGTGGGATGTaGAGCTGCAGGCTCAGCCTT | + |
Preference number: 4 (lower is better) Translates to: GPKVRVSAGVGQTKGKKELQRGM*SCRLSL Trigger: AAGGCTGAGCCTGCAGCTCCACATCCCACGCTGAAG...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTCAACAGCATTCAGGCTGACTCAGTGCATGGAGGTGTTTGTTACAGCCAGCATCACCACGAGGTGCTGTaGCTGAGCCTCGGGACAGCT | + |
Preference number: 4 (lower is better) Translates to: LNSIQADSVHGGVCYSQHHHEVL*LSLGTA Trigger: AGCTGTCCCGAGGCTCAGCCACAGCACCTCGTGGTG...ATGCTGGCTGTAACAAACACCTCCATGCACTGAGTCAGCCTGAATGCTGTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGTTCCATGTGGCTGATTaGGGGATGGAGCGTGGAGGA | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRFHVAD*GMERGG Trigger: TCCTCCACGCTCCATCCCCCAATCAGCCACATGGAA...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAAGGAGGAGGTCTGAAGTaGGGTCTTGCCAGCAGGAAT | + |
Preference number: 4 (lower is better) Translates to: GPKVRVSAGVGQTKGKKEGGGLK*GLASRN Trigger: ATTCCTGCTGGCAAGACCTCACTTCAGACCTCCTCC...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTCAACAGCATTCAGGCTGACTCAGTGCATGGAGGTGTTTGTTACAGCCAGCATTTGGCAGACACCTGCTaGCCACCTCGGACCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: LNSIQADSVHGGVCYSQHLADTC*PPRTSG Trigger: ACCACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAA...ATGCTGGCTGTAACAAACACCTCCATGCACTGAGTCAGCCTGAATGCTGTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCTGGAGACTCAGCAGATaGAACCACAGAAGCCACACT | + |
Preference number: 4 (lower is better) Translates to: QTTRVRVVPAISGATPSIWRLSR*NHRSHT Trigger: AGTGTGGCTTCTGTGGTTGCATCTGCTGAGTCTCCA...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGGTGCTCCACCTTGAGTaGCTTCTTTTGGTTGGATGT | + |
Preference number: 4 (lower is better) Translates to: CGWALPGWMPLGRHGNHEVLHLE*LLLVGC Trigger: ACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCAC...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAAGCTGAGGCTGCATTCTaGAGTTTGGGTGACTGGCTG | + |
Preference number: 4 (lower is better) Translates to: GPKVRVSAGVGQTKGKKEAEAAF*SLGDWL Trigger: CAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGC...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGTTGAGAGCTGGCCTGTaGTCCCAGTTTGGCAGACAC | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRLRAGL*SQFGRH Trigger: GTGTCTGCCAAACTGGGACCACAGGCCAGCTCTCAA...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGCCACACTGGTGGGAGTaGAATTTGCCTGAGCAGAAG | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRPHWWE*NLPEQK Trigger: CTTCTGCTCAGGCAAATTCCACTCCCACCAGTGTGG...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGCAGCAGCTGCTGCAGTaGCAGAAATCCTGCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRQQLLQ*QKSCLL Trigger: AAGCAGGCAGGATTTCTGCCACTGCAGCAGCTGCTG...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCTTGAGTGCCTTCTTTTaGTTGGATGTCATGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: KENEIPAQLREPPVPAWPLSAFF*LDVMQF Trigger: GAACTGCATGACATCCAACCAAAAGAAGGCACTCAA...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGTGGCTGATTGGGGGATaGAGCGTGGAGGAATCATGT | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRWLIGG*SVEESC Trigger: ACATGATTCCTCCACGCTCCATCCCCCAATCAGCCA...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGGGAGTGGAATTTGCCTaGGCAGAAGCAACTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRGVEFA*AEATAV Trigger: GACAGCAGTTGCTTCTGCTCAGGCAAATTCCACTCC...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAATGGTGTGCTCCACCTTaGGTGCCTTCTTTTGGTTGG | + |
Preference number: 4 (lower is better) Translates to: GPKVRVSAGVGQTKGKKEWCAPP*VPSFGW Trigger: CCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCA...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGATTCTGCAGTTTGGGTaGCTGGCTGAAAGTGTGCAG | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRILQFG*LAESVQ Trigger: CTGCACACTTTCAGCCAGTCACCCAAACTGCAGAAT...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGGGTGGGAGTGGAATTTaGCTGAGCAGAAGCAACTGC | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRGGSGI*LSRSNC Trigger: GCAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACC...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGTGGAGACTCAGCAGATaGAACCACAGAAGCCACACT | + |
Preference number: 4 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRWRLSR*NHRSHT Trigger: AGTGTGGCTTCTGTGGTTGCATCTGCTGAGTCTCCA...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGGGCAGAAATCCTGCCTaGTTGTGTCTCCAGCAGGTT | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRGRNPA*LCLQQV Trigger: AACCTGCTGGAGACACAAGCAGGCAGGATTTCTGCC...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGCCCACCTCGGACCAGTaGTGGTGGGATGATGCTGCC | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGPTSDQ*WWDDAA Trigger: GGCAGCATCATCCCACCACCACTGGTCCGAGGTGGG...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGAGGATCAGAAAACCCACCTCGGACCAGTaGTGGTGGGATGATGCTGCC | + |
Preference number: 4 (lower is better) Translates to: APIPIPCTSVTYTLRIRKPTSDQ*WWDDAA Trigger: GGCAGCATCATCCCACCACCACTGGTCCGAGGTGGG...TTTTCTGATCCTCAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CAA 72 bp | AAGTCCCTAACTGTACTGTGTCAAGGGAAACCAGGGTaGGATGGGGAAACGACGGCGACCAATCACAAGAGC | + |
Preference number: 4 (lower is better) Translates to: KSLTVLCQGKPG*DGETTATNHKS Trigger: GCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTCCCTTGACACAGTACAGTTAGGGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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3UTR CAA 72 bp | GGTTGGATGACAGGTGTATGGGAGAAGTCACAAGACTaGGAAGTCTGGATGCACCAGGACAACCGAACCCTC | + |
Preference number: 4 (lower is better) Translates to: GWMTGVWEKSQD*EVWMHQDNRTL Trigger: GAGGGTTCGGTTGTCCTGGTGCATCCAGACTTCCAAGTCTTGTGACTTCTCCCATACACCTGTCATCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR TCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGATTCTGCAGTTTGGGTaGCTGGCTGAAAGTGTGCAG | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRILQFG*LAESVQ Trigger: CTGCACACTTTCAGCCAGTCACCCAAACTGCAGAAT...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | AAACTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCACTGCCAAGCTTGGGCTaGCGAAGGCGAGGGTCCCAC | + |
Preference number: 4 (lower is better) Translates to: KLQFLLIPPKPPWEVTHSLPSLG*RRRGSH Trigger: GTGGGACCCTCGCCTTCGTCAGCCCAAGCTTGGCAG...TGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | CAAGTAGCAACTGCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGGGGTGCGCTTCTGACTaGGGGTTCGGCATGCTTCTT | + |
Preference number: 4 (lower is better) Translates to: QVATAPIPIPCTSVTYTLGCASD*GFGMLL Trigger: AAGAAGCATGCCGAACCCGCAGTCAGAAGCGCACCC...CAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGCAGTTGCTACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGTTGGCAGACACCTGCTaGCCACCTCGGACCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGLADTC*PPRTSG Trigger: ACCACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAA...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGCCAGCAGGAATGTTCTaGGTACCCCGCACGAGTGGG | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGPAGMF*VPRTSG Trigger: CCCACTCGTGCGGGGTACCCAGAACATTCCTGCTGG...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGGGGTGCGCTTCTGACTaGGGGTTCGGCATGCTTCTT | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGGCASD*GFGMLL Trigger: AAGAAGCATGCCGAACCCGCAGTCAGAAGCGCACCC...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGAGTTTGGCAGACACCTaGTGCCCACCTCGGACCAGT | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGSLADT*CPPRTS Trigger: ACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAAACT...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGGTGCTCCACCTTGAGTaGCTTCTTTTGGTTGGATGT | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRVLHLE*LLLVGC Trigger: ACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCAC...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAAGTGCTCCACCTTGAGTaGCTTCTTTTGGTTGGATGT | + |
Preference number: 4 (lower is better) Translates to: GPKVRVSAGVGQTKGKKEVLHLE*LLLVGC Trigger: ACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCAC...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGTCCATCTCCTGCTCTTaGTGTAGAGCCTTCACAAAG | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRSISCS*CRAFTK Trigger: CTTTGTGAAGGCTCTACAGCAAGAGCAGGAGATGGA...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR GCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGGCTCCAGCTCTCACCTaGTTCAGCGTGGGATGTGGA | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGAPALT*FSVGCG Trigger: TCCACATCCCACGCTGAAGCAGGTGAGAGCTGGAGC...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | CTCAACAGCATTCAGGCTGACTCAGTGCATGGAGGTGTTTGTTACAGCCAGCATCCACAGAAGCCACACTaGTGGGAGTGGAATTTGCCT | + |
Preference number: 4 (lower is better) Translates to: LNSIQADSVHGGVCYSQHPQKPH*WEWNLP Trigger: AGGCAAATTCCACTCCCACCAGTGTGGCTTCTGTGG...ATGCTGGCTGTAACAAACACCTCCATGCACTGAGTCAGCCTGAATGCTGTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAATGCAGTTTGGGTGACTaGCTGAAAGTGTGCAGAACA | + |
Preference number: 4 (lower is better) Translates to: GPKVRVSAGVGQTKGKKECSLGD*LKVCRT Trigger: TGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCA...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGTGCAGTTTGGGTGACTaGCTGAAAGTGTGCAGAACA | + |
Preference number: 4 (lower is better) Translates to: LSVEARGCSEQQQTTRVRCSLGD*LKVCRT Trigger: TGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCA...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGGTGTACTGCCAAGCTTaGGCTGACGAAGGCGAGGGT | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGVYCQA*ADEGEG Trigger: ACCCTCGCCTTCGTCAGCCCAAGCTTGGCAGTACAC...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGGGAGGAGGTCTGAAGTaGGGTCTTGCCAGCAGGAAT | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGGGGLK*GLASRN Trigger: ATTCCTGCTGGCAAGACCTCACTTCAGACCTCCTCC...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAACTGCAGGCTCAGCCTTaGTGCTGGCAGTACCCACAC | + |
Preference number: 4 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKLQAQP*CWQYPH Trigger: GTGTGGGTACTGCCAGCATCAAGGCTGAGCCTGCAG...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | ATGGTGTTACCTGTGACCTTGATGACCAGAGCCACTGATGTGTTGCCTCTGGGAGTGCTCCACCTTGAGTaGCTTCTTTTGGTTGGATGT | + |
Preference number: 4 (lower is better) Translates to: MVLPVTLMTRATDVLPLGVLHLE*LLLVGC Trigger: ACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCAC...TCCCAGAGGCAACACATCAGTGGCTCTGGTCATCAAGGTCACAGGTAACACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | TCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGGCTCCTCCCTTTTCAGGCGACTGGTGTaGTCCACCTTGAGTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: SKGLVRQIQMCSVLGSSLFRRLV*STLSAF Trigger: GAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAA...AAGGGAGGAGCCAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGGCTGAGGCTGCATTCTaGAGTTTGGGTGACTGGCTG | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGAEAAF*SLGDWL Trigger: CAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGC...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | TCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGGCTCCTCCCTTTTGAGAGCTGGCCTGTaGTCCCAGTTTGGCAGACAC | + |
Preference number: 4 (lower is better) Translates to: SKGLVRQIQMCSVLGSSLLRAGL*SQFGRH Trigger: GTGTCTGCCAAACTGGGACCACAGGCCAGCTCTCAA...AAGGGAGGAGCCAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGCAGCAGCTGCTGCAGTaGCAGAAATCCTGCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGQQLLQ*QKSCLL Trigger: AAGCAGGCAGGATTTCTGCCACTGCAGCAGCTGCTG...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGAGGATCAGAAAATTCCATGTGGCTGATTaGGGGATGGAGCGTGGAGGA | + |
Preference number: 4 (lower is better) Translates to: APIPIPCTSVTYTLRIRKFHVAD*GMERGG Trigger: TCCTCCACGCTCCATCCCCCAATCAGCCACATGGAA...TTTTCTGATCCTCAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CAA 72 bp | GTCCCTTGTGAGGTGCATAAACTGGGCCTACAAGGGTaGGATGACAGGTGTATGGGAGAAGTCACAAGACTT | + |
Preference number: 4 (lower is better) Translates to: VPCEVHKLGLQG*DDRCMGEVTRL Trigger: AAGTCTTGTGACTTCTCCCATACACCTGTCATCCAACCCTTGTAGGCCCAGTTTATGCACCTCACAAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CAA 72 bp | GGATTTAATCCATTCAGGATAGGGATAAAGCCAGCATaGGTGGGGGTGGCAGCTCTGTACACCCCCAAACAT | + |
Preference number: 4 (lower is better) Translates to: GFNPFRIGIKPA*VGVAALYTPKH Trigger: ATGTTTGGGGGTGTACAGAGCTGCCACCCCCACCAATGCTGGCTTTATCCCTATCCTGAATGGATTAAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR TCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGCCTCCTTCAGCTGCTTaGTCATCCGCTCTCGTTCTT | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGPPSAA*SSALVL Trigger: AAGAACGAGAGCGGATGATCAAGCAGCTGAAGGAGG...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR TCA 90 bp | TCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGGCTCCTCCCTTGTTTGGGTGACTGGCTaGAAGTGTGCAGAACACCAC | + |
Preference number: 4 (lower is better) Translates to: SKGLVRQIQMCSVLGSSLVWVTG*KCAEHH Trigger: GTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAAC...AAGGGAGGAGCCAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGGGTGGGAGTGGAATTTaGCTGAGCAGAAGCAACTGC | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGGGSGI*LSRSNC Trigger: GCAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACC...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | GCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGAGGATCAGAAAACCACACTGGTGGGAGTaGAATTTGCCTGAGCAGAAG | + |
Preference number: 4 (lower is better) Translates to: APIPIPCTSVTYTLRIRKPHWWE*NLPEQK Trigger: CTTCTGCTCAGGCAAATTCCACTCCCACCAGTGTGG...TTTTCTGATCCTCAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGCCACAGAAGCCACACTaGTGGGAGTGGAATTTGCCT | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGPQKPH*WEWNLP Trigger: AGGCAAATTCCACTCCCACCAGTGTGGCTTCTGTGG...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | AAACTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAGTGTACTGCCAAGCTTaGGCTGACGAAGGCGAGGGT | + |
Preference number: 4 (lower is better) Translates to: KLQFLLIPPKPPWEVTHSVYCQA*ADEGEG Trigger: ACCCTCGCCTTCGTCAGCCCAAGCTTGGCAGTACAC...TGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | GCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGAGGATCAGAAAATGGCTGATTGGGGGATaGAGCGTGGAGGAATCATGT | + |
Preference number: 4 (lower is better) Translates to: APIPIPCTSVTYTLRIRKWLIGG*SVEESC Trigger: ACATGATTCCTCCACGCTCCATCCCCCAATCAGCCA...TTTTCTGATCCTCAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | AAACTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCATCACCTGCTTCAGCGTaGGATGTGGAGCTGCAGGCT | + |
Preference number: 4 (lower is better) Translates to: KLQFLLIPPKPPWEVTHSSPASA*DVELQA Trigger: AGCCTGCAGCTCCACATCCCACGCTGAAGCAGGTGA...TGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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3UTR CAA 72 bp | CGTTCCAAGGAGCCAGAAGACTTTTGGTCTATGTCATaGCCACTTAGGAAGGGTGGAGAACAGGAACTGACT | + |
Preference number: 4 (lower is better) Translates to: RSKEPEDFWSMS*PLRKGGEQELT Trigger: AGTCAGTTCCTGTTCTCCACCCTTCCTAAGTGGCAATGACATAGACCAAAAGTCTTCTGGCTCCTTGGAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR TCA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAAGGAGGAGGTCTGAAGTaGGGTCTTGCCAGCAGGAAT | + |
Preference number: 4 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKGGGLK*GLASRN Trigger: ATTCCTGCTGGCAAGACCTCACTTCAGACCTCCTCC...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR TCA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAAGAGGCTGCAGTAGGCTaGGGGATGTTGACAAGCAGA | + |
Preference number: 4 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKEAAVG*GMLTSR Trigger: TCTGCTTGTCAACATCCCTCAGCCTACTGCAGCCTC...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | TCACACATCTGTCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGCTCTCTCGGAATGTCTaGCAGTCCTGCTTACCAGGG | + |
Preference number: 4 (lower is better) Translates to: SHICQKVWFDKYRCVLCLLSRNV*QSCLPG Trigger: CCCTGGTAAGCAGGACTGGCAGACATTCCGAGAGAG...CAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGACAGATGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAACAGATCCTGTGCCCATaGCCTCTGTTGTCCTCAGCA | + |
Preference number: 4 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKQILCP*PLLSSA Trigger: TGCTGAGGACAACAGAGGCCATGGGCACAGGATCTG...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR TCA 90 bp | AAACTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAATGATCCTCTGTCCCTaGATCTGCATGCTGGGCACT | + |
Preference number: 4 (lower is better) Translates to: KLQFLLIPPKPPWEVTHSMILCP*ICMLGT Trigger: AGTGCCCAGCATGCAGATTCAGGGACAGAGGATCAT...TGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR TCA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAAGGAGTGGAATTTGCCTaGGCAGAAGCAACTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKGVEFA*AEATAV Trigger: GACAGCAGTTGCTTCTGCTCAGGCAAATTCCACTCC...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR TCA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAATGGTGTGCTCCACCTTaGGTGCCTTCTTTTGGTTGG | + |
Preference number: 4 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKWCAPP*VPSFGW Trigger: CCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCA...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | TCACACATCTGTCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGACACGGATAAGTCCCTaGTGGATGATCCTCTGTCCC | + |
Preference number: 4 (lower is better) Translates to: SHICQKVWFDKYRCVLCLTRISP*WMILCP Trigger: GGGACAGAGGATCATCCAGCAGGGACTTATCCGTGT...CAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGACAGATGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR GCA 90 bp | AAACTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCATGGAGACTCAGCAGATaGAACCACAGAAGCCACACT | + |
Preference number: 4 (lower is better) Translates to: KLQFLLIPPKPPWEVTHSWRLSR*NHRSHT Trigger: AGTGTGGCTTCTGTGGTTGCATCTGCTGAGTCTCCA...TGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | GCCAGGCACAAAAATACTCAAGGACTAAGAAATGCTTGCATATATTCTCTCTCTTTGGGGGATGGAGCGTaGAGGAATCATGTCCAGGAG | + |
Preference number: 4 (lower is better) Translates to: ARHKNTQGLRNACIYSLSLGDGA*RNHVQE Trigger: CTCCTGGACATGATTCCTCCACGCTCCATCCCCCAA...AGAGAGAGAATATATGCAAGCATTTCTTAGTCCTTGAGTATTTTTGTGCCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CCA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGTTGAGTGCCTTCTTTTaGTTGGATGTCATGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGLSAFF*LDVMQF Trigger: GAACTGCATGACATCCAACCAAAAGAAGGCACTCAA...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CCA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAATTGAGTGCCTTCTTTTaGTTGGATGTCATGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKLSAFF*LDVMQF Trigger: GAACTGCATGACATCCAACCAAAAGAAGGCACTCAA...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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3UTR CAA 72 bp | AACTTACACATTGAGGATCAGAAAACTGACCACTTTTaGGAAACAATCCAAGGTCTTCAGGCTGACATGACT | + |
Preference number: 4 (lower is better) Translates to: NLHIEDQKTDHF*ETIQGLQADMT Trigger: AGTCATGTCAGCCTGAAGACCTTGGATTGTTTCCAAAAAGTGGTCAGTTTTCTGATCCTCAATGTGTAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CAA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCAGCCTGTGGTCCCAGTTaGGCAGACACCTGCTGCCCA | + |
Preference number: 5 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPACGPS*ADTCCP Trigger: TGGGCAGCAGGTGTCTGCCAAACTGGGACCACAGGC...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCATTGCGCAGTGCTAGCTaGGCAGCCGCCTGTCGGCTA | + |
Preference number: 5 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPLRSAS*AAACRL Trigger: TAGCCGACAGGCGGCTGCCAAGCTAGCACTGCGCAA...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAGGCGTCTTTTTCCAGTaGGAGGCGGTGCCCTTGCCG | + |
Preference number: 5 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQGVFFQ*EAVPLP Trigger: CGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCC...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GCTCCCACCCACGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGACAAGCAGACTGGTGTaGGGGACATTGGCGACACGG | + |
Preference number: 5 (lower is better) Translates to: APTHAGQAELAPRSEFLLTSRLV*GTLATR Trigger: CCGTGTCGCCAATGTCCCCAACACCAGTCTGCTTGT...CAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCGTGGGTGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 90 bp | GGGTCCCACCTGTGCTCAGAGGCGTCTTTTTCCAGTTGGAGGCGGTaGCCTTGCCGGTGCCCACGACTCTCTCGGAATGTCTGCCAGTCC | + |
Preference number: 5 (lower is better) Translates to: GSHLCSEASFSSWRR*PCRCPRLSRNVCQS Trigger: GGACTGGCAGACATTCCGAGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCCTCTGAGCACAGGTGGGACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 90 bp | CGAAGGCGAGGGTCCCACCTGTGCTCAGAGGCGTCTTTTTCCAGTTaGAGGCGGTGCCCTTGCCGGTGCCCACGACTCTCTCGGAATGTC | + |
Preference number: 5 (lower is better) Translates to: RRRGSHLCSEASFSS*RRCPCRCPRLSRNV Trigger: GACATTCCGAGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCCTCTGAGCACAGGTGGGACCCTCGCCTTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCGCCTGTGGTCCCAGTTaGGCAGACACCTGCTGCCCA | + |
Preference number: 5 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCACGPS*ADTCCP Trigger: TGGGCAGCAGGTGTCTGCCAAACTGGGACCACAGGC...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GACTTCTGGCTGAGAGGCCACCCCGGTGCTGCCGTTCCAAGGAGCCAGAAGACTGCCTGTGGTCCCAGTTaGGCAGACACCTGCTGCCCA | + |
Preference number: 5 (lower is better) Translates to: DFWLRGHPGAAVPRSQKTACGPS*ADTCCP Trigger: TGGGCAGCAGGTGTCTGCCAAACTGGGACCACAGGC...AGTCTTCTGGCTCCTTGGAACGGCAGCACCGGGGTGGCCTCTCAGCCAGAAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CAA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAACTGGTGTTGGGGACATaGGCGACACGGATAAGTCCC | + |
Preference number: 5 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQLVLGT*ATRISP Trigger: GGGACTTATCCGTGTCGCCAATGTCCCCAACACCAG...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCGGCGTCTTTTTCCAGTaGGAGGCGGTGCCCTTGCCG | + |
Preference number: 5 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCGVFFQ*EAVPLP Trigger: CGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCC...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 90 bp | CTGTGGTCCCAGTTTGGCAGACACCTGCTGCCCACCTCGGACCAGTaGTGGTGGGATGATGCTGCCGGGTATTCGAGTGGAGGAGGTCTG | + |
Preference number: 5 (lower is better) Translates to: LWSQFGRHLLPTSDQ*WWDDAAGYSSGGGL Trigger: CAGACCTCCTCCACTCGAATACCCGGCAGCATCATCCCACCACCACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAAACTGGGACCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 90 bp | GCAGAACACCACGAGGTGCTGTGGCTGAGCCTCGGGACAGCTGGCTaGAAGCCTGTAGTGAGGACCCGTTATTCCAGACACGGGCCTCTC | + |
Preference number: 5 (lower is better) Translates to: AEHHEVLWLSLGTAG*KPVVRTRYSRHGPL Trigger: GAGAGGCCCGTGTCTGGAATAACGGGTCCTCACTACAGGCTTCCAGCCAGCTGTCCCGAGGCTCAGCCACAGCACCTCGTGGTGTTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCATGGTGGGAGTGGAATTaGCCTGAGCAGAAGCAACTG | + |
Preference number: 5 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPWWEWN*PEQKQL Trigger: CAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACCA...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 90 bp | TGCTCAGAGGCGTCTTTTTCCAGTTGGAGGCGGTGCCCTTGCCGGTaGCCACGACTCTCTCGGAATGTCTGCCAGTCCTGCTTACCAGGG | + |
Preference number: 5 (lower is better) Translates to: CSEASFSSWRRCPCR*PRLSRNVCQSCLPG Trigger: CCCTGGTAAGCAGGACTGGCAGACATTCCGAGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCCTCTGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 90 bp | TGGTCCCAGTTTGGCAGACACCTGCTGCCCACCTCGGACCAGTGGTaGTGGGATGATGCTGCCGGGTATTCGAGTGGAGGAGGTCTGAAG | + |
Preference number: 5 (lower is better) Translates to: WSQFGRHLLPTSDQW*WDDAAGYSSGGGLK Trigger: CTTCAGACCTCCTCCACTCGAATACCCGGCAGCATCATCCCACCACCACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAAACTGGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GGCCGCCCGTGCGTGCTGGACACACAGCTACTTCTGCCTTTCACCATGGAACCACGGTGGCATGACTACTaGAGAGCTGGCCTGTGGTCC | + |
Preference number: 5 (lower is better) Translates to: GRPCVLDTQLLLPFTMEPRWHDY*RAGLWS Trigger: GGACCACAGGCCAGCTCTCAAGTAGTCATGCCACCG...TGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTCCAGCACGCACGGGCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTACTGGTGTTGGGGACATaGGCGACACGGATAAGTCCC | + |
Preference number: 5 (lower is better) Translates to: GQAELAPRSEFLLVSGKLLVLGT*ATRISP Trigger: GGGACTTATCCGTGTCGCCAATGTCCCCAACACCAG...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCCTGGTGTTGGGGACATaGGCGACACGGATAAGTCCC | + |
Preference number: 5 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCLVLGT*ATRISP Trigger: GGGACTTATCCGTGTCGCCAATGTCCCCAACACCAG...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CGCTGGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAATGGTGGGAGTGGAATTaGCCTGAGCAGAAGCAACTG | + |
Preference number: 5 (lower is better) Translates to: RWPGRAGPKVRVSAGVGQWWEWN*PEQKQL Trigger: CAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACCA...TTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGGGCGTCTTTTTCCAGTaGGAGGCGGTGCCCTTGCCG | + |
Preference number: 5 (lower is better) Translates to: CGWALPGWMPLGRHGNHEGVFFQ*EAVPLP Trigger: CGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCC...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS TCA 90 bp | GTTTGGCAGACACCTGCTGCCCACCTCGGACCAGTGGTGGTGGGATaGTGCTGCCGGGTATTCGAGTGGAGGAGGTCTGAAGTGAGGTCT | + |
Preference number: 5 (lower is better) Translates to: VWQTPAAHLGPVVVG*CCRVFEWRRSEVRS Trigger: AGACCTCACTTCAGACCTCCTCCACTCGAATACCCGGCAGCATCATCCCACCACCACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS TCA 90 bp | GTCGATCCACAGCCGAGGAGGTCTTGTGTACTGCCAAGCTTGGGCTaGCGAAGGCGAGGGTCCCACCTGTGCTCAGAGGCGTCTTTTTCC | + |
Preference number: 5 (lower is better) Translates to: VDPQPRRSCVLPSLG*RRRGSHLCSEASFS Trigger: GGAAAAAGACGCCTCTGAGCACAGGTGGGACCCTCGCCTTCGTCAGCCCAAGCTTGGCAGTACACAAGACCTCCTCGGCTGTGGATCGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 90 bp | CTTACGTCGGGGCTTTATGACCTGCTTCAGCGTGGGATGTGGAGCTaGAGGCTCAGCCTTGATGCTGGCAGTACCCACACCCTGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: LTSGLYDLLQRGMWS*RLSLDAGSTHTLLQ Trigger: CTGCAGCAGGGTGTGGGTACTGCCAGCATCAAGGCTGAGCCTGCAGCTCCACATCCCACGCTGAAGCAGGTCATAAAGCCCCGACGTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000212478.2 |
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CDS GCA 90 bp | CACCTGTGCTCAGAGGCGTCTTTTTCCAGTTGGAGGCGGTGCCCTTaGCGGTGCCCACGACTCTCTCGGAATGTCTGCCAGTCCTGCTTA | + |
Preference number: 5 (lower is better) Translates to: HLCSEASFSSWRRCP*RCPRLSRNVCQSCL Trigger: TAAGCAGGACTGGCAGACATTCCGAGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCCTCTGAGCACAGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 90 bp | GAGGTATTCTCGCTGTCGATCCACAGCCGAGGAGGTCTTGTGTACTaGCAAGCTTGGGCTGACGAAGGCGAGGGTCCCACCTGTGCTCAG | + |
Preference number: 5 (lower is better) Translates to: EVFSLSIHSRGGLVY*QAWADEGEGPTCAQ Trigger: CTGAGCACAGGTGGGACCCTCGCCTTCGTCAGCCCAAGCTTGGCAGTACACAAGACCTCCTCGGCTGTGGATCGACAGCGAGAATACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCTTGCGCAGTGCTAGCTaGGCAGCCGCCTGTCGGCTA | + |
Preference number: 5 (lower is better) Translates to: QTTRVRVVPAISGATPSILRSAS*AAACRL Trigger: TAGCCGACAGGCGGCTGCCAAGCTAGCACTGCGCAA...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS TCA 90 bp | TGGTGGGATGATGCTGCCGGGTATTCGAGTGGAGGAGGTCTGAAGTaGGGTCTTGCCAGCAGGAATGTTCTGGGTACCCCGCACGAGTGG | + |
Preference number: 5 (lower is better) Translates to: WWDDAAGYSSGGGLK*GLASRNVLGTPHEW Trigger: CCACTCGTGCGGGGTACCCAGAACATTCCTGCTGGCAAGACCTCACTTCAGACCTCCTCCACTCGAATACCCGGCAGCATCATCCCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 90 bp | GTAGCTGAGGCTGCATTCTGCAGTTTGGGTGACTGGCTGAAAGTGTaGAGAACACCACGAGGTGCTGTGGCTGAGCCTCGGGACAGCTGG | + |
Preference number: 5 (lower is better) Translates to: VAEAAFCSLGDWLKV*RTPRGAVAEPRDSW Trigger: CCAGCTGTCCCGAGGCTCAGCCACAGCACCTCGTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCCGGTGGCATGACTACTaGAGAGCTGGCCTGTGGTCC | + |
Preference number: 5 (lower is better) Translates to: QTTRVRVVPAISGATPSIRWHDY*RAGLWS Trigger: GGACCACAGGCCAGCTCTCAAGTAGTCATGCCACCG...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCAGAAATCCTGCCTGCTaGTGTCTCCAGCAGGTTCTG | + |
Preference number: 5 (lower is better) Translates to: KENEIPAQLREPPVPAWPRNPAC*CLQQVL Trigger: CAGAACCTGCTGGAGACACAAGCAGGCAGGATTTCT...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCAGAAATCCTGCCTGCTaGTGTCTCCAGCAGGTTCTG | + |
Preference number: 5 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCRNPAC*CLQQVL Trigger: CAGAACCTGCTGGAGACACAAGCAGGCAGGATTTCT...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCGGGTGTGTCACAGTGTCCAAGTGCCTTCTTTTGGTaGGATGTCATGCAGTTCTCA | + |
Preference number: 5 (lower is better) Translates to: LNFGSPRCQPGPGVSQCPSAFFW*DVMQFS Trigger: TGAGAACTGCATGACATCCAACCAAAAGAAGGCACT...TGGACACTGTGACACACCCGGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCCTGGTGTGCTCCACCTaGAGTGCCTTCTTTTGGTTG | + |
Preference number: 5 (lower is better) Translates to: KENEIPAQLREPPVPAWPLVCST*SAFFWL Trigger: CAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAG...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GACTTCTGGCTGAGAGGCCACCCCGGTGCTGCCGTTCCAAGGAGCCAGAAGACTGCTGCATTCTGCAGTTaGGGTGACTGGCTGAAAGTG | + |
Preference number: 5 (lower is better) Translates to: DFWLRGHPGAAVPRSQKTAAFCS*GDWLKV Trigger: CACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGC...AGTCTTCTGGCTCCTTGGAACGGCAGCACCGGGGTGGCCTCTCAGCCAGAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS CCA 90 bp | CTTACCAGGGCCGTAGCTGAGGCTGCATTCTGCAGTTTGGGTGACTaGCTGAAAGTGTGCAGAACACCACGAGGTGCTGTGGCTGAGCCT | + |
Preference number: 5 (lower is better) Translates to: LTRAVAEAAFCSLGD*LKVCRTPRGAVAEP Trigger: AGGCTCAGCCACAGCACCTCGTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGCTACGGCCCTGGTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGCGGTGGCATGACTACTaGAGAGCTGGCCTGTGGTCC | + |
Preference number: 5 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRRWHDY*RAGLWS Trigger: GGACCACAGGCCAGCTCTCAAGTAGTCATGCCACCG...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCTGGTGTTGGGGACATaGGCGACACGGATAAGTCCC | + |
Preference number: 5 (lower is better) Translates to: ETRVGWGNDGDQSQEQKALVLGT*ATRISP Trigger: GGGACTTATCCGTGTCGCCAATGTCCCCAACACCAG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGTTGCGCAGTGCTAGCTaGGCAGCCGCCTGTCGGCTA | + |
Preference number: 5 (lower is better) Translates to: LSVEARGCSEQQQTTRVRLRSAS*AAACRL Trigger: TAGCCGACAGGCGGCTGCCAAGCTAGCACTGCGCAA...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 90 bp | TTCAAGGCTACTGTGGTCAGGCCATTCACCCTTGGGCTCGATGGCTaGTCACTGTCAGAGAGCACAATCACATCAGGCGAGGGAGGTCTC | + |
Preference number: 5 (lower is better) Translates to: FKATVVRPFTLGLDG*SLSESTITSGEGGL Trigger: GAGACCTCCCTCGCCTGATGTGATTGTGCTCTCTGACAGTGAGCAGCCATCGAGCCCAAGGGTGAATGGCCTGACCACAGTAGCCTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS GCA 90 bp | TGTCTGCCAGTCCTGCTTACCAGGGCCGTAGCTGAGGCTGCATTCTaGAGTTTGGGTGACTGGCTGAAAGTGTGCAGAACACCACGAGGT | + |
Preference number: 5 (lower is better) Translates to: CLPVLLTRAVAEAAF*SLGDWLKVCRTPRG Trigger: ACCTCGTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGCTACGGCCCTGGTAAGCAGGACTGGCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 90 bp | GTCTTTCAAGGCTACTGTGGTCAGGCCATTCACCCTTGGGCTCGATaGCTGCTCACTGTCAGAGAGCACAATCACATCAGGCGAGGGAGG | + |
Preference number: 5 (lower is better) Translates to: VFQGYCGQAIHPWAR*LLTVREHNHIRRGR Trigger: CCTCCCTCGCCTGATGTGATTGTGCTCTCTGACAGTGAGCAGCCATCGAGCCCAAGGGTGAATGGCCTGACCACAGTAGCCTTGAAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGTCCTCCTTCAGCTGCTaGATCATCCGCTCTCGTTCT | + |
Preference number: 5 (lower is better) Translates to: CGWALPGWMPLGRHGNHESSFSC*IIRSRS Trigger: AGAACGAGAGCGGATGATCAAGCAGCTGAAGGAGGA...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAACGGTGGCATGACTACTaGAGAGCTGGCCTGTGGTCC | + |
Preference number: 5 (lower is better) Translates to: GPKVRVSAGVGQTKGKKERWHDY*RAGLWS Trigger: GGACCACAGGCCAGCTCTCAAGTAGTCATGCCACCG...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGACAAGCAGACTGGTGTaGGGGACATTGGCGACACGG | + |
Preference number: 5 (lower is better) Translates to: LAPRSEFLLVSGKLKAKRTSRLV*GTLATR Trigger: CCGTGTCGCCAATGTCCCCAACACCAGTCTGCTTGT...CCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | TGTGGCTGGGCCCTACCTGGATGGATGCCTCTTGGCAGGCATGGGAATCATGAGGCTGCATTCTGCAGTTaGGGTGACTGGCTGAAAGTG | + |
Preference number: 5 (lower is better) Translates to: CGWALPGWMPLGRHGNHEAAFCS*GDWLKV Trigger: CACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGC...CTCATGATTCCCATGCCTGCCAAGAGGCATCCATCCAGGTAGGGCCCAGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 90 bp | CCTCAGCTCCTCCTTCAGCTGCTTGATCATCCGCTCTCGTTCTTCTaGGCTGCTTTTCAAGAGCGCCTCAGTGCTGGTGTCTTTCAAGGC | + |
Preference number: 5 (lower is better) Translates to: PQLLLQLLDHPLSFF*AAFQERLSAGVFQG Trigger: GCCTTGAAAGACACCAGCACTGAGGCGCTCTTGAAAAGCAGCCCAGAAGAACGAGAGCGGATGATCAAGCAGCTGAAGGAGGAGCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS CCA 90 bp | CTGGAGACTCAGCAGATGCAACCACAGAAGCCACACTGGTGGGAGTaGAATTTGCCTGAGCAGAAGCAACTGCTGTCCCCTTCATGGAGG | + |
Preference number: 5 (lower is better) Translates to: LETQQMQPQKPHWWE*NLPEQKQLLSPSWR Trigger: CCTCCATGAAGGGGACAGCAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACCAGTGTGGCTTCTGTGGTTGCATCTGCTGAGTCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 90 bp | GCGGCCTTCAGGCGACTGGTGTGCTCCACCTTGAGTGCCTTCTTTTaGTTGGATGTCATGCAGTTCTCACACATAACGGCTCCACCCTTC | + |
Preference number: 5 (lower is better) Translates to: AAFRRLVCSTLSAFF*LDVMQFSHITAPPF Trigger: GAAGGGTGGAGCCGTTATGTGTGAGAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAAGGCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCTCCTCCTTCAGCTGCTaGATCATCCGCTCTCGTTCT | + |
Preference number: 5 (lower is better) Translates to: QTTRVRVVPAISGATPSISSFSC*IIRSRS Trigger: AGAACGAGAGCGGATGATCAAGCAGCTGAAGGAGGA...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCTGGTGGGAGTGGAATTaGCCTGAGCAGAAGCAACTG | + |
Preference number: 5 (lower is better) Translates to: QTTRVRVVPAISGATPSIWWEWN*PEQKQL Trigger: CAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACCA...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GCTCTGCTGACTCCAGACCTAAGGGCTGTGGCTGGGCCCTACCTGGATGGATGCAGTGCCTTCTTTTGGTaGGATGTCATGCAGTTCTCA | + |
Preference number: 5 (lower is better) Translates to: ALLTPDLRAVAGPYLDGCSAFFW*DVMQFS Trigger: TGAGAACTGCATGACATCCAACCAAAAGAAGGCACT...GCATCCATCCAGGTAGGGCCCAGCCACAGCCCTTAGGTCTGGAGTCAGCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | AAAGAAAACGAAATCCCGGCTCAACTTCGGGAGCCCCCGGTGCCAGCCTGGCCCCTTGAGTGCCTTCTTTaGGTTGGATGTCATGCAGTT | + |
Preference number: 5 (lower is better) Translates to: KENEIPAQLREPPVPAWPLECLL*VGCHAV Trigger: AACTGCATGACATCCAACCAAAAGAAGGCACTCAAG...GGGCCAGGCTGGCACCGGGGGCTCCCGAAGTTGAGCCGGGATTTCGTTTTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GGCCAGGCAGAGCTGGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTACTTGAGTGCCTTCTTTaGGTTGGATGTCATGCAGTT | + |
Preference number: 5 (lower is better) Translates to: GQAELAPRSEFLLVSGKLLECLL*VGCHAV Trigger: AACTGCATGACATCCAACCAAAAGAAGGCACTCAAG...TAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCCAGCTCTGCCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CAGACAACTAGAGTCAGGGTGGTACCTGCCATCTCTGGTGCCACTCCGAGCATCCTGGTGTGCTCCACCTaGAGTGCCTTCTTTTGGTTG | + |
Preference number: 5 (lower is better) Translates to: QTTRVRVVPAISGATPSILVCST*SAFFWL Trigger: CAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAG...GATGCTCGGAGTGGCACCAGAGATGGCAGGTACCACCCTGACTCTAGTTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GAAACCAGGGTTGGATGGGGAAACGACGGCGACCAATCACAAGAGCAGAAGGCCCTGGTGTGCTCCACCTaGAGTGCCTTCTTTTGGTTG | + |
Preference number: 5 (lower is better) Translates to: ETRVGWGNDGDQSQEQKALVCST*SAFFWL Trigger: CAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAG...GGCCTTCTGCTCTTGTGATTGGTCGCCGTCGTTTCCCCATCCAACCCTGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTAGCTGCATTCTGCAGTTaGGGTGACTGGCTGAAAGTG | + |
Preference number: 5 (lower is better) Translates to: SNQLWLQHSGLSISLEPLAAFCS*GDWLKV Trigger: CACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGC...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 90 bp | TCATCCGCTCTCGTTCTTCTGGGCTGCTTTTCAAGAGCGCCTCAGTaGTGGTGTCTTTCAAGGCTACTGTGGTCAGGCCATTCACCCTTG | + |
Preference number: 5 (lower is better) Translates to: SSALVLLGCFSRAPQ*WCLSRLLWSGHSPL Trigger: CAAGGGTGAATGGCCTGACCACAGTAGCCTTGAAAGACACCAGCACTGAGGCGCTCTTGAAAAGCAGCCCAGAAGAACGAGAGCGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS CCA 90 bp | AGTGCTGGTGTCTTTCAAGGCTACTGTGGTCAGGCCATTCACCCTTaGGCTCGATGGCTGCTCACTGTCAGAGAGCACAATCACATCAGG | + |
Preference number: 5 (lower is better) Translates to: SAGVFQGYCGQAIHP*ARWLLTVREHNHIR Trigger: CCTGATGTGATTGTGCTCTCTGACAGTGAGCAGCCATCGAGCCCAAGGGTGAATGGCCTGACCACAGTAGCCTTGAAAGACACCAGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CCACCCCGGTGCTGCCGTTCCAAGGAGCCAGAAGACTTTTGGTCTATGTCATTGTGGTGGGAGTGGAATTaGCCTGAGCAGAAGCAACTG | + |
Preference number: 5 (lower is better) Translates to: PPRCCRSKEPEDFWSMSLWWEWN*PEQKQL Trigger: CAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACCA...CAATGACATAGACCAAAAGTCTTCTGGCTCCTTGGAACGGCAGCACCGGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS GCA 90 bp | CTTCACAAAGGCGGCCTTCAGGCGACTGGTGTGCTCCACCTTGAGTaGCTTCTTTTGGTTGGATGTCATGCAGTTCTCACACATAACGGC | + |
Preference number: 5 (lower is better) Translates to: LHKGGLQATGVLHLE*LLLVGCHAVLTHNG Trigger: GCCGTTATGTGTGAGAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAAGGCCGCCTTTGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 90 bp | TCTTGCTGTAGAGCCTTCACAAAGGCGGCCTTCAGGCGACTGGTGTaGTCCACCTTGAGTGCCTTCTTTTGGTTGGATGTCATGCAGTTC | + |
Preference number: 5 (lower is better) Translates to: SCCRAFTKAAFRRLV*STLSAFFWLDVMQF Trigger: GAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAAGGCCGCCTTTGTGAAGGCTCTACAGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGAGGATCAGAAAATTGCGCAGTGCTAGCTaGGCAGCCGCCTGTCGGCTA | + |
Preference number: 5 (lower is better) Translates to: APIPIPCTSVTYTLRIRKLRSAS*AAACRL Trigger: TAGCCGACAGGCGGCTGCCAAGCTAGCACTGCGCAA...TTTTCTGATCCTCAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CAA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTAAGTGCCTTCTTTTGGTaGGATGTCATGCAGTTCTCA | + |
Preference number: 5 (lower is better) Translates to: SNQLWLQHSGLSISLEPLSAFFW*DVMQFS Trigger: TGAGAACTGCATGACATCCAACCAAAAGAAGGCACT...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAAGCCTGTGGTCCCAGTTaGGCAGACACCTGCTGCCCA | + |
Preference number: 5 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKACGPS*ADTCCP Trigger: TGGGCAGCAGGTGTCTGCCAAACTGGGACCACAGGC...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR CAA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGACAAGCAGACTGGTGTaGGGGACATTGGCGACACGG | + |
Preference number: 5 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGTSRLV*GTLATR Trigger: CCGTGTCGCCAATGTCCCCAACACCAGTCTGCTTGT...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CCACCCCGGTGCTGCCGTTCCAAGGAGCCAGAAGACTTTTGGTCTATGTCATTGCTTGAGTGCCTTCTTTaGGTTGGATGTCATGCAGTT | + |
Preference number: 5 (lower is better) Translates to: PPRCCRSKEPEDFWSMSLLECLL*VGCHAV Trigger: AACTGCATGACATCCAACCAAAAGAAGGCACTCAAG...CAATGACATAGACCAAAAGTCTTCTGGCTCCTTGGAACGGCAGCACCGGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CAA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAAGGCGTCTTTTTCCAGTaGGAGGCGGTGCCCTTGCCG | + |
Preference number: 5 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKGVFFQ*EAVPLP Trigger: CGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCC...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR CAA 90 bp | AGCAACCAGCTCTGGCTCCAGCACAGTGGACTCAGCATCTCTCTGGAGCCTCTATCCATTTTCATTTTCTaGTTCTCCACATCATCCTCC | + |
Preference number: 5 (lower is better) Translates to: SNQLWLQHSGLSISLEPLSIFIF*FSTSSS Trigger: GGAGGATGATGTGGAGAACAAGAAAATGAAAATGGA...TAGAGGCTCCAGAGAGATGCTGAGTCCACTGTGCTGGAGCCAGAGCTGGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | GGCCCCAAGGTCCGAGTTTCTGCTGGTGTCGGGCAAACTAAAGGCAAAAAGGAACTTGAGTGCCTTCTTTaGGTTGGATGTCATGCAGTT | + |
Preference number: 5 (lower is better) Translates to: GPKVRVSAGVGQTKGKKELECLL*VGCHAV Trigger: AACTGCATGACATCCAACCAAAAGAAGGCACTCAAG...TTCCTTTTTGCCTTTAGTTTGCCCGACACCAGCAGAAACTCGGACCTTGGGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CTTCAATTTCTGTTAATTCCCCCAAAACCACCCTGGGAAGTGACACACTCAAAAACAAGCAGACTGGTGTaGGGGACATTGGCGACACGG | + |
Preference number: 5 (lower is better) Translates to: LQFLLIPPKPPWEVTHSKTSRLV*GTLATR Trigger: CCGTGTCGCCAATGTCCCCAACACCAGTCTGCTTGT...TTTTGAGTGTGTCACTTCCCAGGGTGGTTTTGGGGGAATTAACAGAAATTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000065169.12 ENSMUST00000177851.9 |
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CDS-3UTR CAA 90 bp | GCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGAGGATCAGAAAACTGGTGTGCTCCACCTaGAGTGCCTTCTTTTGGTTG | + |
Preference number: 5 (lower is better) Translates to: APIPIPCTSVTYTLRIRKLVCST*SAFFWL Trigger: CAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAG...TTTTCTGATCCTCAATGTGTAAGTTACACTAGTGCAGGGTATGGGGATTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CAA 90 bp | GACACACAGCTACTTCTGCCTTTCACCATGGAACCAATTGTTAAGAGAATGGGGGCTGCATTCTGCAGTTaGGGTGACTGGCTGAAAGTG | + |
Preference number: 5 (lower is better) Translates to: DTQLLLPFTMEPIVKRMGAAFCS*GDWLKV Trigger: CACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGC...CCCCATTCTCTTAACAATTGGTTCCATGGTGAAAGGCAGAAGTAGCTGTGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | CTAAGTGTGGAAGCCAGGGGTTGCAGTGAGCAGCAACAGACAACTAGAGTCAGGTCCATTTTCATTTTCTaGTTCTCCACATCATCCTCC | + |
Preference number: 5 (lower is better) Translates to: LSVEARGCSEQQQTTRVRSIFIF*FSTSSS Trigger: GGAGGATGATGTGGAGAACAAGAAAATGAAAATGGA...CCTGACTCTAGTTGTCTGTTGCTGCTCACTGCAACCCCTGGCTTCCACACTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS-3UTR CAA 90 bp | TCACACATCTGTCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGTCCTCCTTCAGCTGCTaGATCATCCGCTCTCGTTCT | + |
Preference number: 5 (lower is better) Translates to: SHICQKVWFDKYRCVLCLSSFSC*IIRSRS Trigger: AGAACGAGAGCGGATGATCAAGCAGCTGAAGGAGGA...CAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGACAGATGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS-3UTR CAA 90 bp | TCACACATCTGTCAAAAGGTCTGGTTCGACAAATACAGATGTGTTCTGTGCTTGAGTGCCTTCTTTTGGTaGGATGTCATGCAGTTCTCA | + |
Preference number: 5 (lower is better) Translates to: SHICQKVWFDKYRCVLCLSAFFW*DVMQFS Trigger: TGAGAACTGCATGACATCCAACCAAAAGAAGGCACT...CAAGCACAGAACACATCTGTATTTGTCGAACCAGACCTTTTGACAGATGTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS CCA 72 bp | CACGAGGTGCTGTGGCTGAGCCTCGGGACAGCTGGCTaGAAGCGGCAAGGGCTCCAGCTCTCACCTGCTTCA | + |
Preference number: 6 (lower is better) Translates to: HEVLWLSLGTAG*KRQGLQLSPAS Trigger: TGAAGCAGGTGAGAGCTGGAGCCCTTGCCGCTTCCAGCCAGCTGTCCCGAGGCTCAGCCACAGCACCTCGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS CAA 90 bp | CGTCTCCTAACAGCCCCTCGCCAGATCCTGTGCCCATGGCCTCTGTaGTCCTCAGCAACCCCTGGGCTGAGCCTGCACTCGGCTCTGGCA | + |
Preference number: 6 (lower is better) Translates to: RLLTAPRQILCPWPL*SSATPGLSLHSALA Trigger: TGCCAGAGCCGAGTGCAGGCTCAGCCCAGGGGTTGCTGAGGACAACAGAGGCCATGGGCACAGGATCTGGCGAGGGGCTGTTAGGAGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000211960.2 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS TCA 72 bp | GCTGAAAGTGTGCAGAACACCACGAGGTGCTGTGGCTaGGCCTCGGGACAGCTGGCTGGAAGCGGCAAGGGC | + |
Preference number: 6 (lower is better) Translates to: AESVQNTTRCCG*ASGQLAGSGKG Trigger: GCCCTTGCCGCTTCCAGCCAGCTGTCCCGAGGCTCAGCCACAGCACCTCGTGGTGTTCTGCACACTTTCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177851.9 |
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CDS GCA 72 bp | GAGCTGGCCTGTGGTCCCAGTTTGGCAGACACCTGCTaGCCACCTCGGACCAGTGGTGGTGGGATGATGCTG | + |
Preference number: 6 (lower is better) Translates to: ELACGPSLADTC*PPRTSGGGMML Trigger: CAGCATCATCCCACCACCACTGGTCCGAGGTGGGCAGCAGGTGTCTGCCAAACTGGGACCACAGGCCAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 72 bp | GGGTCCCACCTGTGCTCAGAGGCGTCTTTTTCCAGTTaGAGGCGGTGCCCTTGCCGGTGCCCACGACTCTCT | + |
Preference number: 6 (lower is better) Translates to: GSHLCSEASFSS*RRCPCRCPRLS Trigger: AGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCCTCTGAGCACAGGTGGGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | CCTGGGCTGAGCCTGCACTCGGCTCTGGCATCACCCTaGTGTCTCCGTCCACTGTCAGCTCTGATGACCCTT | + |
Preference number: 6 (lower is better) Translates to: PGLSLHSALASP*CLRPLSALMTL Trigger: AAGGGTCATCAGAGCTGACAGTGGACGGAGACAGCAGGGTGATGCCAGAGCCGAGTGCAGGCTCAGCCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000211960.2 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS GCA 72 bp | CCCTGCTGCAGCAGGCGCTGCTCCATCTCCTGCTCTTaGTGTAGAGCCTTCACAAAGGCGGCCTTCAGGCGA | + |
Preference number: 6 (lower is better) Translates to: PCCSRRCSISCS*CRAFTKAAFRR Trigger: TCGCCTGAAGGCCGCCTTTGTGAAGGCTCTACAGCAAGAGCAGGAGATGGAGCAGCGCCTGCTGCAGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | GCGTCTTTTTCCAGTTGGAGGCGGTGCCCTTGCCGGTaGCCACGACTCTCTCGGAATGTCTGCCAGTCCTGC | + |
Preference number: 6 (lower is better) Translates to: ASFSSWRRCPCR*PRLSRNVCQSC Trigger: GCAGGACTGGCAGACATTCCGAGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | TCGCTGTCGATCCACAGCCGAGGAGGTCTTGTGTACTaGCAAGCTTGGGCTGACGAAGGCGAGGGTCCCACC | + |
Preference number: 6 (lower is better) Translates to: SLSIHSRGGLVY*QAWADEGEGPT Trigger: GGTGGGACCCTCGCCTTCGTCAGCCCAAGCTTGGCAGTACACAAGACCTCCTCGGCTGTGGATCGACAGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 90 bp | CCACCTGTGCTCAGAGGCGTCTTTTTCCAGTTGGAGGCGGTGCCCTaGCCGGTGCCCACGACTCTCTCGGAATGTCTGCCAGTCCTGCTT | + |
Preference number: 6 (lower is better) Translates to: PPVLRGVFFQLEAVP*PVPTTLSECLPVLL Trigger: AAGCAGGACTGGCAGACATTCCGAGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCCTCTGAGCACAGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS TCA 72 bp | ACACCTGCTGCCCACCTCGGACCAGTGGTGGTGGGATaGTGCTGCCGGGTATTCGAGTGGAGGAGGTCTGAA | + |
Preference number: 6 (lower is better) Translates to: TPAAHLGPVVVG*CCRVFEWRRSE Trigger: TTCAGACCTCCTCCACTCGAATACCCGGCAGCATCATCCCACCACCACTGGTCCGAGGTGGGCAGCAGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | TCAGAGGCGTCTTTTTCCAGTTGGAGGCGGTGCCCTTaGCGGTGCCCACGACTCTCTCGGAATGTCTGCCAG | + |
Preference number: 6 (lower is better) Translates to: SEASFSSWRRCP*RCPRLSRNVCQ Trigger: CTGGCAGACATTCCGAGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCCTCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | CTGTGCTCAGAGGCGTCTTTTTCCAGTTGGAGGCGGTaGCCTTGCCGGTGCCCACGACTCTCTCGGAATGTC | + |
Preference number: 6 (lower is better) Translates to: LCSEASFSSWRR*PCRCPRLSRNV Trigger: GACATTCCGAGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCCTCTGAGCACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 72 bp | GACAAGCGGTGGCATGACTACTTGAGAGCTGGCCTGTaGTCCCAGTTTGGCAGACACCTGCTGCCCACCTCG | + |
Preference number: 6 (lower is better) Translates to: DKRWHDYLRAGL*SQFGRHLLPTS Trigger: CGAGGTGGGCAGCAGGTGTCTGCCAAACTGGGACCACAGGCCAGCTCTCAAGTAGTCATGCCACCGCTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 72 bp | ACACCACGAGGTGCTGTGGCTGAGCCTCGGGACAGCTaGCTGGAAGCCTGTAGTGAGGACCCGTTATTCCAG | + |
Preference number: 6 (lower is better) Translates to: TPRGAVAEPRDS*LEACSEDPLFQ Trigger: CTGGAATAACGGGTCCTCACTACAGGCTTCCAGCCAGCTGTCCCGAGGCTCAGCCACAGCACCTCGTGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000212478.2 |
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CDS CCA 72 bp | ATCCACAGCCGAGGAGGTCTTGTGTACTGCCAAGCTTaGGCTGACGAAGGCGAGGGTCCCACCTGTGCTCAG | + |
Preference number: 6 (lower is better) Translates to: IHSRGGLVYCQA*ADEGEGPTCAQ Trigger: CTGAGCACAGGTGGGACCCTCGCCTTCGTCAGCCCAAGCTTGGCAGTACACAAGACCTCCTCGGCTGTGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 72 bp | AGCAGTGTCTTCTCCAGCTGCTTGCGCAGTGCTAGCTaGGCAGCCGCCTGTCGGCTAGCTGGAGACTCAGCA | + |
Preference number: 6 (lower is better) Translates to: SSVFSSCLRSAS*AAACRLAGDSA Trigger: TGCTGAGTCTCCAGCTAGCCGACAGGCGGCTGCCAAGCTAGCACTGCGCAAGCAGCTGGAGAAGACACTGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 72 bp | CTCAGAGGCGTCTTTTTCCAGTTGGAGGCGGTGCCCTaGCCGGTGCCCACGACTCTCTCGGAATGTCTGCCA | + |
Preference number: 6 (lower is better) Translates to: LRGVFFQLEAVP*PVPTTLSECLP Trigger: TGGCAGACATTCCGAGAGAGTCGTGGGCACCGGCAAGGGCACCGCCTCCAACTGGAAAAAGACGCCTCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS TCA 72 bp | CTCCTGAGCGGAACGCCAACTTACGTCGGGGCTTTATaGCCTGCTTCAGCGTGGGATGTGGAGCTGCAGGCT | + |
Preference number: 6 (lower is better) Translates to: LLSGTPTYVGAL*PASAWDVELQA Trigger: AGCCTGCAGCTCCACATCCCACGCTGAAGCAGGTCATAAAGCCCCGACGTAAGTTGGCGTTCCGCTCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000212478.2 |
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CDS CCA 72 bp | ACGTCGGGGCTTTATGACCTGCTTCAGCGTGGGATGTaGAGCTGCAGGCTCAGCCTTGATGCTGGCAGTACC | + |
Preference number: 6 (lower is better) Translates to: TSGLYDLLQRGM*SCRLSLDAGST Trigger: GGTACTGCCAGCATCAAGGCTGAGCCTGCAGCTCCACATCCCACGCTGAAGCAGGTCATAAAGCCCCGACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000212478.2 |
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CDS CAA 90 bp | ATGTCCAGGAGGTATTCTCGCTGTCGATCCACAGCCGAGGAGGTCTaGTGTACTGCCAAGCTTGGGCTGACGAAGGCGAGGGTCCCACCT | + |
Preference number: 6 (lower is better) Translates to: MSRRYSRCRSTAEEV*CTAKLGLTKARVPP Trigger: AGGTGGGACCCTCGCCTTCGTCAGCCCAAGCTTGGCAGTACACAAGACCTCCTCGGCTGTGGATCGACAGCGAGAATACCTCCTGGACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 90 bp | CCAGTCCTGCTTACCAGGGCCGTAGCTGAGGCTGCATTCTGCAGTTaGGGTGACTGGCTGAAAGTGTGCAGAACACCACGAGGTGCTGTG | + |
Preference number: 6 (lower is better) Translates to: PVLLTRAVAEAAFCS*GDWLKVCRTPRGAV Trigger: CACAGCACCTCGTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGCTACGGCCCTGGTAAGCAGGACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS TCA 72 bp | GATGCTGCCGGGTATTCGAGTGGAGGAGGTCTGAAGTaGGGTCTTGCCAGCAGGAATGTTCTGGGTACCCCG | + |
Preference number: 6 (lower is better) Translates to: DAAGYSSGGGLK*GLASRNVLGTP Trigger: CGGGGTACCCAGAACATTCCTGCTGGCAAGACCTCACTTCAGACCTCCTCCACTCGAATACCCGGCAGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | GCTGCATTCTGCAGTTTGGGTGACTGGCTGAAAGTGTaGAGAACACCACGAGGTGCTGTGGCTGAGCCTCGG | + |
Preference number: 6 (lower is better) Translates to: AAFCSLGDWLKV*RTPRGAVAEPR Trigger: CCGAGGCTCAGCCACAGCACCTCGTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 72 bp | AGAGCGCCTCAGTGCTGGTGTCTTTCAAGGCTACTGTaGTCAGGCCATTCACCCTTGGGCTCGATGGCTGCT | + |
Preference number: 6 (lower is better) Translates to: RAPQCWCLSRLL*SGHSPLGSMAA Trigger: AGCAGCCATCGAGCCCAAGGGTGAATGGCCTGACCACAGTAGCCTTGAAAGACACCAGCACTGAGGCGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS CAA 72 bp | AGGTATTCTCGCTGTCGATCCACAGCCGAGGAGGTCTaGTGTACTGCCAAGCTTGGGCTGACGAAGGCGAGG | + |
Preference number: 6 (lower is better) Translates to: RYSRCRSTAEEV*CTAKLGLTKAR Trigger: CCTCGCCTTCGTCAGCCCAAGCTTGGCAGTACACAAGACCTCCTCGGCTGTGGATCGACAGCGAGAATACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | ACTGTGGTCAGGCCATTCACCCTTGGGCTCGATGGCTaGTCACTGTCAGAGAGCACAATCACATCAGGCGAG | + |
Preference number: 6 (lower is better) Translates to: TVVRPFTLGLDG*SLSESTITSGE Trigger: CTCGCCTGATGTGATTGTGCTCTCTGACAGTGAGCAGCCATCGAGCCCAAGGGTGAATGGCCTGACCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS GCA 72 bp | ACTGGTGGGAGTGGAATTTGCCTGAGCAGAAGCAACTaGTGTCCCCTTCATGGAGGCTGCAGTAGGCTGAGG | + |
Preference number: 6 (lower is better) Translates to: TGGSGICLSRSN*CPLHGGCSRLR Trigger: CCTCAGCCTACTGCAGCCTCCATGAAGGGGACAGCAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 72 bp | GGCTACTGTGGTCAGGCCATTCACCCTTGGGCTCGATaGCTGCTCACTGTCAGAGAGCACAATCACATCAGG | + |
Preference number: 6 (lower is better) Translates to: GYCGQAIHPWAR*LLTVREHNHIR Trigger: CCTGATGTGATTGTGCTCTCTGACAGTGAGCAGCCATCGAGCCCAAGGGTGAATGGCCTGACCACAGTAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS CCA 72 bp | GCCGTAGCTGAGGCTGCATTCTGCAGTTTGGGTGACTaGCTGAAAGTGTGCAGAACACCACGAGGTGCTGTG | + |
Preference number: 6 (lower is better) Translates to: AVAEAAFCSLGD*LKVCRTPRGAV Trigger: CACAGCACCTCGTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGCTACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 90 bp | GGCGGCCTTCAGGCGACTGGTGTGCTCCACCTTGAGTGCCTTCTTTaGGTTGGATGTCATGCAGTTCTCACACATAACGGCTCCACCCTT | + |
Preference number: 6 (lower is better) Translates to: GGLQATGVLHLECLL*VGCHAVLTHNGSTL Trigger: AAGGGTGGAGCCGTTATGTGTGAGAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAAGGCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS TCA 72 bp | GGGATGATGCTGCCGGGTATTCGAGTGGAGGAGGTCTaGAGTGAGGTCTTGCCAGCAGGAATGTTCTGGGTA | + |
Preference number: 6 (lower is better) Translates to: GMMLPGIRVEEV*SEVLPAGMFWV Trigger: TACCCAGAACATTCCTGCTGGCAAGACCTCACTTCAGACCTCCTCCACTCGAATACCCGGCAGCATCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | TCTCCACATCATCCTCCGTTAGGTCAGGTTCAAGGGTaGGCTTCTGACTGCGGGTTCGGCATGCTTCTTCAC | + |
Preference number: 6 (lower is better) Translates to: SPHHPPLGQVQG*ASDCGFGMLLH Trigger: GTGAAGAAGCATGCCGAACCCGCAGTCAGAAGCGCACCCTTGAACCTGACCTAACGGAGGATGATGTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000211960.2 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS GCA 72 bp | CTGAGCAGAAGCAACTGCTGTCCCCTTCATGGAGGCTaGAGTAGGCTGAGGGATGTTGACAAGCAGACTGGT | + |
Preference number: 6 (lower is better) Translates to: LSRSNCCPLHGG*SRLRDVDKQTG Trigger: ACCAGTCTGCTTGTCAACATCCCTCAGCCTACTGCAGCCTCCATGAAGGGGACAGCAGTTGCTTCTGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | GGCGGCCTTCAGGCGACTGGTGTGCTCCACCTTGAGTaGCTTCTTTTGGTTGGATGTCATGCAGTTCTCACA | + |
Preference number: 6 (lower is better) Translates to: GGLQATGVLHLE*LLLVGCHAVLT Trigger: TGTGAGAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAAGGCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | AGAGCCTTCACAAAGGCGGCCTTCAGGCGACTGGTGTaGTCCACCTTGAGTGCCTTCTTTTGGTTGGATGTC | + |
Preference number: 6 (lower is better) Translates to: RAFTKAAFRRLV*STLSAFFWLDV Trigger: GACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAAGGCCGCCTTTGTGAAGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS GCA 72 bp | GTCCTGCTTACCAGGGCCGTAGCTGAGGCTGCATTCTaGAGTTTGGGTGACTGGCTGAAAGTGTGCAGAACA | + |
Preference number: 6 (lower is better) Translates to: VLLTRAVAEAAF*SLGDWLKVCRT Trigger: TGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGCTACGGCCCTGGTAAGCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 72 bp | CAGCAGATGCAACCACAGAAGCCACACTGGTGGGAGTaGAATTTGCCTGAGCAGAAGCAACTGCTGTCCCCT | + |
Preference number: 6 (lower is better) Translates to: QQMQPQKPHWWE*NLPEQKQLLSP Trigger: AGGGGACAGCAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACCAGTGTGGCTTCTGTGGTTGCATCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 72 bp | CTTACCAGGGCCGTAGCTGAGGCTGCATTCTGCAGTTaGGGTGACTGGCTGAAAGTGTGCAGAACACCACGA | + |
Preference number: 6 (lower is better) Translates to: LTRAVAEAAFCS*GDWLKVCRTPR Trigger: TCGTGGTGTTCTGCACACTTTCAGCCAGTCACCCAAACTGCAGAATGCAGCCTCAGCTACGGCCCTGGTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 90 bp | CAGTGCTGGTGTCTTTCAAGGCTACTGTGGTCAGGCCATTCACCCTaGGGCTCGATGGCTGCTCACTGTCAGAGAGCACAATCACATCAG | + |
Preference number: 6 (lower is better) Translates to: QCWCLSRLLWSGHSP*GSMAAHCQRAQSHQ Trigger: CTGATGTGATTGTGCTCTCTGACAGTGAGCAGCCATCGAGCCCAAGGGTGAATGGCCTGACCACAGTAGCCTTGAAAGACACCAGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS TCA 72 bp | CAAAGGCGGCCTTCAGGCGACTGGTGTGCTCCACCTTaGGTGCCTTCTTTTGGTTGGATGTCATGCAGTTCT | + |
Preference number: 6 (lower is better) Translates to: QRRPSGDWCAPP*VPSFGWMSCSS Trigger: AGAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAAGGCCGCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 72 bp | GAGACTCAGCAGATGCAACCACAGAAGCCACACTGGTaGGAGTGGAATTTGCCTGAGCAGAAGCAACTGCTG | + |
Preference number: 6 (lower is better) Translates to: ETQQMQPQKPHW*EWNLPEQKQLL Trigger: CAGCAGTTGCTTCTGCTCAGGCAAATTCCACTCCCACCAGTGTGGCTTCTGTGGTTGCATCTGCTGAGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 72 bp | TGTCTTTCAAGGCTACTGTGGTCAGGCCATTCACCCTaGGGCTCGATGGCTGCTCACTGTCAGAGAGCACAA | + |
Preference number: 6 (lower is better) Translates to: CLSRLLWSGHSP*GSMAAHCQRAQ Trigger: TTGTGCTCTCTGACAGTGAGCAGCCATCGAGCCCAAGGGTGAATGGCCTGACCACAGTAGCCTTGAAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS CAA 72 bp | ACAAAGGCGGCCTTCAGGCGACTGGTGTGCTCCACCTaGAGTGCCTTCTTTTGGTTGGATGTCATGCAGTTC | + |
Preference number: 6 (lower is better) Translates to: TKAAFRRLVCST*SAFFWLDVMQF Trigger: GAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAAGGCCGCCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 90 bp | GCCTTCAGGCGACTGGTGTGCTCCACCTTGAGTGCCTTCTTTTGGTaGGATGTCATGCAGTTCTCACACATAACGGCTCCACCCTTCTCT | + |
Preference number: 6 (lower is better) Translates to: AFRRLVCSTLSAFFW*DVMQFSHITAPPFS Trigger: AGAGAAGGGTGGAGCCGTTATGTGTGAGAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 72 bp | GTTCTTCTGGGCTGCTTTTCAAGAGCGCCTCAGTGCTaGTGTCTTTCAAGGCTACTGTGGTCAGGCCATTCA | + |
Preference number: 6 (lower is better) Translates to: VLLGCFSRAPQC*CLSRLLWSGHS Trigger: TGAATGGCCTGACCACAGTAGCCTTGAAAGACACCAGCACTGAGGCGCTCTTGAAAAGCAGCCCAGAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212277.2 ENSMUST00000212478.2 |
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CDS CAA 72 bp | CAGGCGACTGGTGTGCTCCACCTTGAGTGCCTTCTTTaGGTTGGATGTCATGCAGTTCTCACACATAACGGC | + |
Preference number: 6 (lower is better) Translates to: QATGVLHLECLL*VGCHAVLTHNG Trigger: GCCGTTATGTGTGAGAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 90 bp | AGAGCCTTCACAAAGGCGGCCTTCAGGCGACTGGTGTGCTCCACCTaGAGTGCCTTCTTTTGGTTGGATGTCATGCAGTTCTCACACATA | + |
Preference number: 6 (lower is better) Translates to: RAFTKAAFRRLVCST*SAFFWLDVMQFSHI Trigger: TATGTGTGAGAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCTGAAGGCCGCCTTTGTGAAGGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS TCA 72 bp | GCTGTAGGCTTCTGTGCGGTGGCTTCCTTCTGTATCTaGCTCTGCCGCAGCTTCTTCAACAAGACCAGTTTT | + |
Preference number: 6 (lower is better) Translates to: AVGFCAVASFCI*LCRSFFNKTSF Trigger: AAAACTGGTCTTGTTGAAGAAGCTGCGGCAGAGTCAGATACAGAAGGAAGCCACCGCACAGAAGCCTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CCA 72 bp | AGGCGACTGGTGTGCTCCACCTTGAGTGCCTTCTTTTaGTTGGATGTCATGCAGTTCTCACACATAACGGCT | + |
Preference number: 6 (lower is better) Translates to: RRLVCSTLSAFF*LDVMQFSHITA Trigger: AGCCGTTATGTGTGAGAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |
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CDS CAA 72 bp | CGACTGGTGTGCTCCACCTTGAGTGCCTTCTTTTGGTaGGATGTCATGCAGTTCTCACACATAACGGCTCCA | + |
Preference number: 6 (lower is better) Translates to: RLVCSTLSAFFW*DVMQFSHITAP Trigger: TGGAGCCGTTATGTGTGAGAACTGCATGACATCCAACCAAAAGAAGGCACTCAAGGTGGAGCACACCAGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065169.12 ENSMUST00000116463.4 ENSMUST00000177851.9 ENSMUST00000212478.2 |