Pregenerated sensors for GATAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007415Ensembl transcript IDs: ENSMUST00000007559.15, ENSMUST00000119783.2, ENSMUST00000140871.2, ENSMUST00000196304.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCTTGGAGCTCAGCTGGTACAGTGCCCAGCACGCACAAAGCTCTaGTTCATCCCTCAGCACCAGGTAAATGAGCCATGCTGGTGTGCA | + |
|
Preference number: 1 (lower is better) Translates to: GLGAQLVQCPARTKL*FIPQHQVNEPCWCA Trigger: TGCACACCAGCATGGCTCATTTACCTGGTGCTGAGGGATGAATCAGAGCTTTGTGCGTGCTGGGCACTGTACCAGCTGAGCTCCAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR GCA 90 bp | GGCCACTCTCACAGAGGCTGCTGCCTCAGTAAGAGGAGGGGATGCTaGATGCAGATCAAAGATCTGGCTGAAGCAGCTGATGCTGACAGG | + |
|
Preference number: 1 (lower is better) Translates to: GHSHRGCCLSKRRGC*MQIKDLAEAADADR Trigger: CCTGTCAGCATCAGCTGCTTCAGCCAGATCTTTGATCTGCATGCAGCATCCCCTCCTCTTACTGAGGCAGCAGCCTCTGTGAGAGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CCA 90 bp | GCAAAAACCCAGCCATCTGTAAGCCAGGAAGCAAGCCCTCACACATaGCCATCGTCACAGCACCCAGATCTGACTTCCGACCTTGAGAAC | + |
|
Preference number: 1 (lower is better) Translates to: AKTQPSVSQEASPHT*PSSQHPDLTSDLEN Trigger: GTTCTCAAGGTCGGAAGTCAGATCTGGGTGCTGTGACGATGGCCATGTGTGAGGGCTTGCTTCCTGGCTTACAGATGGCTGGGTTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| 3UTR GCA 90 bp | ACTCTCACAGAGGCTGCTGCCTCAGTAAGAGGAGGGGATGCTGCATaGAGATCAAAGATCTGGCTGAAGCAGCTGATGCTGACAGGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: TLTEAAASVRGGDAA*RSKIWLKQLMLTGK Trigger: TTTGCCTGTCAGCATCAGCTGCTTCAGCCAGATCTTTGATCTGCATGCAGCATCCCCTCCTCTTACTGAGGCAGCAGCCTCTGTGAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CCA 90 bp | GCTGCCTCAGTAAGAGGAGGGGATGCTGCATGCAGATCAAAGATCTaGCTGAAGCAGCTGATGCTGACAGGCAAAGGCAGGTCTACAGAA | + |
|
Preference number: 1 (lower is better) Translates to: AASVRGGDAACRSKI*LKQLMLTGKGRSTE Trigger: TTCTGTAGACCTGCCTTTGCCTGTCAGCATCAGCTGCTTCAGCCAGATCTTTGATCTGCATGCAGCATCCCCTCCTCTTACTGAGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR TCA 90 bp | TGGGGTGGCCAGGCCTTTTTATGTGCGGAACCTGGCCTTGGTAGGTaGTGCTATAAGCTGCTGCAGCTTCATGGAGCCAATATACAAGTT | + |
|
Preference number: 1 (lower is better) Translates to: WGGQAFLCAEPGLGR*CYKLLQLHGANIQV Trigger: AACTTGTATATTGGCTCCATGAAGCTGCAGCAGCTTATAGCATCACCTACCAAGGCCAGGTTCCGCACATAAAAAGGCCTGGCCACCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR CCA 90 bp | AAACTTAAGCCTGGCATGGCGGCGCACACCTTTAGTCCCAGTACTTaGGAAGCAGAAGCAAGCAGATCTCTTGAGTTCAATGCCAGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: KLKPGMAAHTFSPST*EAEASRSLEFNASL Trigger: CAGACTGGCATTGAACTCAAGAGATCTGCTTGCTTCTGCTTCCCAAGTACTGGGACTAAAGGTGTGCGCCGCCATGCCAGGCTTAAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR TCA 90 bp | AGTGATGTCTGCTGCGAGTTGTCGTTCTGGAGTATTTACGTCTTATaGCTGGCCCTCTCCGTGTGTAATTTAGGATGGAGGCTCCAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: SDVCCELSFWSIYVL*LALSVCNLGWRLQL Trigger: GAGCTGGAGCCTCCATCCTAAATTACACACGGAGAGGGCCAGTCATAAGACGTAAATACTCCAGAACGACAACTCGCAGCAGACATCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR TCA 90 bp | GTAGGTAACATTTTTCTCAAGTCCTGTTTCCAGGTAAGAACTTCATaGAGAAGTTCTGGCGTTAACTACCTACATAACACACCTGTCACA | + |
|
Preference number: 1 (lower is better) Translates to: VGNIFLKSCFQVRTS*RSSGVNYLHNTPVT Trigger: TGTGACAGGTGTGTTATGTAGGTAGTTAACGCCAGAACTTCTTCATGAAGTTCTTACCTGGAAACAGGACTTGAGAAAAATGTTACCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CAA 90 bp | TCTCGATCTGGGGTGGCCAGGCCTTTTTATGTGCGGAACCTGGCCTaGGTAGGTGATGCTATAAGCTGCTGCAGCTTCATGGAGCCAATA | + |
|
Preference number: 2 (lower is better) Translates to: SRSGVARPFYVRNLA*VGDAISCCSFMEPI Trigger: TATTGGCTCCATGAAGCTGCAGCAGCTTATAGCATCACCTACCAAGGCCAGGTTCCGCACATAAAAAGGCCTGGCCACCCCAGATCGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGATCAAAGATCTGGCTGAAGCAGCTGATGCTGACAGGCAAAGGCAGGTCTGGTGTGAGATCAGTGTaGAGAGCCAGAGCTAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: CRSKIWLKQLMLTGKGRSGVRSV*RARANP Trigger: TGGGTTAGCTCTGGCTCTTCACACTGATCTCACACC...AGACCTGCCTTTGCCTGTCAGCATCAGCTGCTTCAGCCAGATCTTTGATCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CAA 90 bp | TCGTCACAGCACCCAGATCTGACTTCCGACCTTGAGAACAGTCTATaGCTCAAGCCCCCAGTCTCTGACACTTTGCTCTTTGACAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SSQHPDLTSDLENSL*LKPPVSDTLLFDSS Trigger: TGAGCTGTCAAAGAGCAAAGTGTCAGAGACTGGGGGCTTGAGCAATAGACTGTTCTCAAGGTCGGAAGTCAGATCTGGGTGCTGTGACGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| 3UTR CAA 90 bp | GGAAGCTCGTATGAATCGGAGCTTGGAAATGGGACCCCTTCTGACTaGGTACCTTCAGCACTTGTAGTTGATGTGATGTGGACTGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: GSSYESELGNGTPSD*VPSALVVDVMWTGV Trigger: AACCCCAGTCCACATCACATCAACTACAAGTGCTGAAGGTACCAAGTCAGAAGGGGTCCCATTTCCAAGCTCCGATTCATACGAGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCTGCCCACTCCCCCATCATACAACCAAAGCACACCATCCAAATTTCCAGCACCGAGAGAGAAGACTGTaGCTTTGTAAGACATACTGC | + |
|
Preference number: 2 (lower is better) Translates to: TCPLPHHTTKAHHPNFQHRERRL*LCKTYC Trigger: GCAGTATGTCTTACAAAGCCACAGTCTTCTCTCTCG...GTGCTGGAAATTTGGATGGTGTGCTTTGGTTGTATGATGGGGGAGTGGGCAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR-3UTR GCA 90 bp | ATATGTACCGGCTCTACTTTGGAAGCTCGTATGAATCGGAGCTTGGAAATGGGACCTGGTTGGCTTGTCTaGGAAGTAAGTATGTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ICTGSTLEARMNRSLEMGPGWLV*EVSMSQ Trigger: CTGGGACATACTTACTTCGCAGACAAGCCAACCAGG...TCCCATTTCCAAGCTCCGATTCATACGAGCTTCCAAAGTAGAGCCGGTACATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTTGGGAAGCAGAAGCAAGCAGATCTCTTGAGTTCAATGCCAGTCTGGTCTACGATTTCCCTGGAATCTaGCACTTTGCCTGGGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: TWEAEASRSLEFNASLVYDFPGI*HFAWEN Trigger: ATTTTCCCAGGCAAAGTGGCAGATTCCAGGGAAATC...GTAGACCAGACTGGCATTGAACTCAAGAGATCTGCTTGCTTCTGCTTCCCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CAA 90 bp | AGATCCTTCCAGACGAATCAAAATTCAATATGTACCGGCTCTACTTaGGAAGCTCGTATGAATCGGAGCTTGGAAATGGGACCCCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RSFQTNQNSICTGST*EARMNRSLEMGPLL Trigger: CAGAAGGGGTCCCATTTCCAAGCTCCGATTCATACGAGCTTCCAAAGTAGAGCCGGTACATATTGAATTTTGATTCGTCTGGAAGGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR-3UTR GCA 90 bp | GGACCCCTAAATGGTGAGACTGGTGTCCTTATAAGAGACAATGGAGTACTCTCTCAGTCTCTGACACTTTaGTCTTTGACAGCTCACACA | + |
|
Preference number: 2 (lower is better) Translates to: GPLNGETGVLIRDNGVLSQSLTL*SLTAHT Trigger: TGTGTGAGCTGTCAAAGAGCAAAGTGTCAGAGACTG...AGAGAGTACTCCATTGTCTCTTATAAGGACACCAGTCTCACCATTTAGGGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| 3UTR CAA 90 bp | GCCGGTGTGGGCGACATGAAATCTTGTGTCATAAAAATGTTTTTATaGCGCACCTCAGTCCATAGAGGATTAAGAGCTGTAGAAGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: AGVGDMKSCVIKMFL*RTSVHRGLRAVEAG Trigger: TCCTGCTTCTACAGCTCTTAATCCTCTATGGACTGAGGTGCGCAATAAAAACATTTTTATGACACAAGATTTCATGTCGCCCACACCGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAGAGATGGAGAAATAAAACCTCAATTCTAAGTTCTAGTTTTGTCACCATAGCTCTGACAGTGACCTaGGTCTGTCTTCAATGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: RQRWRNKTSILSSSFVTIALTVT*VCLQWS Trigger: AGACCATTGAAGACAGACTCAGGTCACTGTCAGAGC...TATGGTGACAAAACTAGAACTTAGAATTGAGGTTTTATTTCTCCATCTCTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTGAAAGGCAGAGATGGAGAAATAAAACCTCAATTCTAAGTTCTAGTTTTGTCCAGGTAAATGAGCCATaGTGGTGTGCACCTGTAATC | + |
|
Preference number: 2 (lower is better) Translates to: SERQRWRNKTSILSSSFVQVNEP*WCAPVI Trigger: GATTACAGGTGCACACCAGCATGGCTCATTTACCTG...GACAAAACTAGAACTTAGAATTGAGGTTTTATTTCTCCATCTCTGCCTTTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR TCA 72 bp | ACAGAAGTGGCTGACCGCTCTGGTGTGAGATCAGTGTaGAGAGCCAGAGCTAACCCATCACCCAGCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TEVADRSGVRSV*RARANPSPSSC Trigger: GCAGCTGCTGGGTGATGGGTTAGCTCTGGCTCTTCACACTGATCTCACACCAGAGCGGTCAGCCACTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CCA 72 bp | CAGCCATCTGTAAGCCAGGAAGCAAGCCCTCACACATaGCCATCGTCACAGCACCCAGATCTGACTTCCGAC | + |
|
Preference number: 3 (lower is better) Translates to: QPSVSQEASPHT*PSSQHPDLTSD Trigger: GTCGGAAGTCAGATCTGGGTGCTGTGACGATGGCCATGTGTGAGGGCTTGCTTCCTGGCTTACAGATGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| 3UTR GCA 72 bp | GAGGCTGCTGCCTCAGTAAGAGGAGGGGATGCTGCATaGAGATCAAAGATCTGGCTGAAGCAGCTGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EAAASVRGGDAA*RSKIWLKQLML Trigger: CAGCATCAGCTGCTTCAGCCAGATCTTTGATCTGCATGCAGCATCCCCTCCTCTTACTGAGGCAGCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CCA 72 bp | CGGTCTGTCTGGATAGATGAGGACAGAGGCAGCAAGTaGGTACCTGCCCACTCCCCCATCATACAACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RSVWIDEDRGSK*VPAHSPIIQPK Trigger: CTTTGGTTGTATGATGGGGGAGTGGGCAGGTACCCACTTGCTGCCTCTGTCCTCATCTATCCAGACAGACCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR TCA 72 bp | AAGGCAGGTCTACAGAAGTGGCTGACCGCTCTGGTGTaGGATCAGTGTGAAGAGCCAGAGCTAACCCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: KAGLQKWLTALV*DQCEEPELTHH Trigger: GTGATGGGTTAGCTCTGGCTCTTCACACTGATCTCACACCAGAGCGGTCAGCCACTTCTGTAGACCTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR GCA 72 bp | CACAGAGGCTGCTGCCTCAGTAAGAGGAGGGGATGCTaGATGCAGATCAAAGATCTGGCTGAAGCAGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: HRGCCLSKRRGC*MQIKDLAEAAD Trigger: ATCAGCTGCTTCAGCCAGATCTTTGATCTGCATGCAGCATCCCCTCCTCTTACTGAGGCAGCAGCCTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR GCA 72 bp | TCTCACAGAGGCTGCTGCCTCAGTAAGAGGAGGGGATaGTGCATGCAGATCAAAGATCTGGCTGAAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SHRGCCLSKRRG*CMQIKDLAEAA Trigger: AGCTGCTTCAGCCAGATCTTTGATCTGCATGCAGCATCCCCTCCTCTTACTGAGGCAGCAGCCTCTGTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CCA 72 bp | CAGTGGTTCCGACGACTCCGCTGGAGATGGAGAATGTaGCTTAGAGCAATCCCTGCTTTCTCTCGAGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: QWFRRLRWRWRM*LRAIPAFSRDV Trigger: GACATCTCGAGAGAAAGCAGGGATTGCTCTAAGCCACATTCTCCATCTCCAGCGGAGTCGTCGGAACCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR CCA 72 bp | GAACAAGAGATGAGAGAGAGAGATCTCGATCTGGGGTaGCCAGGCCTTTTTATGTGCGGAACCTGGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: EQEMRERDLDLG*PGLFMCGTWPW Trigger: CCAAGGCCAGGTTCCGCACATAAAAAGGCCTGGCCACCCCAGATCGAGATCTCTCTCTCTCATCTCTTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTAAGCTGCATGGCCAATGTAGAGCCGGTGTGGGCGACATGAAATCTTGTTGTACCGGCTCTACTTaGGAAGCTCGTATGAATCGG | + |
|
Preference number: 3 (lower is better) Translates to: PPKLHGQCRAGVGDMKSCCTGST*EARMNR Trigger: CCGATTCATACGAGCTTCCAAAGTAGAGCCGGTACA...ACAAGATTTCATGTCGCCCACACCGGCTCTACATTGGCCATGCAGCTTAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR TCA 72 bp | CAGGCCTTTTTATGTGCGGAACCTGGCCTTGGTAGGTaGTGCTATAAGCTGCTGCAGCTTCATGGAGCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: QAFLCAEPGLGR*CYKLLQLHGAN Trigger: ATTGGCTCCATGAAGCTGCAGCAGCTTATAGCATCACCTACCAAGGCCAGGTTCCGCACATAAAAAGGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR GCA 72 bp | ACAGTCTATTGCTCAAGCCCCCAGTCTCTGACACTTTaGTCTTTGACAGCTCACACAGACTGGCACATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TVYCSSPQSLTL*SLTAHTDWHIH Trigger: ATGAATGTGCCAGTCTGTGTGAGCTGTCAAAGAGCAAAGTGTCAGAGACTGGGGGCTTGAGCAATAGACTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| 3UTR GCA 72 bp | CGGAACCTGGCCTTGGTAGGTGATGCTATAAGCTGCTaGAGCTTCATGGAGCCAATATACAAGTTTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RNLALVGDAISC*SFMEPIYKFLL Trigger: AAGAAGAAACTTGTATATTGGCTCCATGAAGCTGCAGCAGCTTATAGCATCACCTACCAAGGCCAGGTTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATCCTTCCAGACGAATCAAAATTCAATATGTACCGGCTCTACTTTGGAAGCTCGTATGAATCGGAGCTaGGAAATGGGACCCCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSFQTNQNSICTGSTLEARMNRS*EMGPLL Trigger: CAGAAGGGGTCCCATTTCCAAGCTCCGATTCATACG...AGCTTCCAAAGTAGAGCCGGTACATATTGAATTTTGATTCGTCTGGAAGGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAAATTTGGAAAAGAATGGGGTAGGGTACACAAAGAGGATCACAGGAAGAAAACCAGTCTCTGACACTTaGCTCTTTGACAGCTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: INLEKNGVGYTKRITGRKPVSDT*LFDSSH Trigger: GTGTGAGCTGTCAAAGAGCAAAGTGTCAGAGACTGG...TTTTCTTCCTGTGATCCTCTTTGTGTACCCTACCCCATTCTTTTCCAAATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| 3UTR TCA 72 bp | ATTTTTCTCAAGTCCTGTTTCCAGGTAAGAACTTCATaGAGAAGTTCTGGCGTTAACTACCTACATAACACA | + |
|
Preference number: 3 (lower is better) Translates to: IFLKSCFQVRTS*RSSGVNYLHNT Trigger: TGTGTTATGTAGGTAGTTAACGCCAGAACTTCTTCATGAAGTTCTTACCTGGAAACAGGACTTGAGAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR GCA 90 bp | GCAAAAACCCAGCCATCTGTAAGCCAGGAAGCAAGCCCTCACACATGGCCATCGTGGCGAAGGTGGTGGTaGCGAAGCCACCGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AKTQPSVSQEASPHTWPSWRRWW*RSHRRR Trigger: GCGGCGGCGGTGGCTTCGGCACCACCACCTTCGCCA...CGATGGCCATGTGTGAGGGCTTGCTTCCTGGCTTACAGATGGCTGGGTTTTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCAGACGAGGCAGGGATCTCAAGGCCAAGCCAACCTGAACCTGGGCTATTGGTGGCGAAGGTGGTaGTGCCGAAGCCACCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TRQTRQGSQGQANLNLGYWWRRW*CRSHRR Trigger: GCGGCGGTGGCTTCGGCACCACCACCTTCGCCACCA...ATAGCCCAGGTTCAGGTTGGCTTGGCCTTGAGATCCCTGCCTCGTCTGCCTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR GCA 90 bp | TGCCCACTCCCCCATCATACAACCAAAGCACACCATCCAAATTTCCAGCACATGTGGCGAAGGTGGTGGTaGCGAAGCCACCGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CPLPHHTTKAHHPNFQHMWRRWW*RSHRRR Trigger: GCGGCGGCGGTGGCTTCGGCACCACCACCTTCGCCA...CATGTGCTGGAAATTTGGATGGTGTGCTTTGGTTGTATGATGGGGGAGTGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR GCA 90 bp | AGAACAGTCTATTGCTCAAGCCCCCAGTCTCTGACACTTTGCTCTTTGACAGCTCGCCGCCCCGGCCCGTaGAGTGATGGCAGAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RTVYCSSPQSLTLCSLTARRPGP*SDGRGS Trigger: AGATCCTCTGCCATCACTGCACGGGCCGGGGCGGCG...AGCTGTCAAAGAGCAAAGTGTCAGAGACTGGGGGCTTGAGCAATAGACTGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGGGGATGCTGCATGCAGATCAAAGATCTGGCTGAAGCAGCTGATGCTGATTTCTTGCTTACTCTaGTTGCCGCCGCCGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGGDAACRSKIWLKQLMLISCLL*LPPPPP Trigger: CGGGGGCGGCGGCGGCAAGCAGAGTAAGCAAGAAAT...CAGCATCAGCTGCTTCAGCCAGATCTTTGATCTGCATGCAGCATCCCCTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR CCA 90 bp | AGAACAGTCTATTGCTCAAGCCCCCAGTCTCTGACACTTTGCTCTTTGACAGCTGACCGGCCGAGGTGGTaGCGAAGGTGGTGGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RTVYCSSPQSLTLCSLTADRPRW*RRWWCR Trigger: TCGGCACCACCACCTTCGCCACCACCTCGGCCGGTC...AGCTGTCAAAGAGCAAAGTGTCAGAGACTGGGGGCTTGAGCAATAGACTGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACCTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTGACCGGCCGAGGTGGTaGCGAAGGTGGTGGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GNLALFWDVCVLGLKLRLDRPRW*RRWWCR Trigger: TCGGCACCACCACCTTCGCCACCACCTCGGCCGGTC...AAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAGGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CAA 72 bp | GTTACGTTTGTACGTTCGTATAGTGTAAGGCTGGGCTaGGAGCTCAGCTGGTACAGTGCCCAGCACGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VTFVRSYSVRLG*ELSWYSAQHAQ Trigger: TTGTGCGTGCTGGGCACTGTACCAGCTGAGCTCCAAGCCCAGCCTTACACTATACGAACGTACAAACGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGCTAACCCATCACCCAGCAGCTGCTTTCTACAGGACTAAAGCAGCCAAGGTGAGGACCTTGACTTaGAATACTCAGAAGGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PELTHHPAAAFYRTKAAKVRTLT*NTQKAR Trigger: ACGCGCCTTCTGAGTATTTCAAGTCAAGGTCCTCAC...CTTGGCTGCTTTAGTCCTGTAGAAAGCAGCTGCTGGGTGATGGGTTAGCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTATACCCGCCGCCCCGGCCCGTaGAGTGATGGCAGAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LALFWDVCVLGLKLRLYTRRPGP*SDGRGS Trigger: AGATCCTCTGCCATCACTGCACGGGCCGGGGCGGCG...GGTATAAAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR CCA 90 bp | CATAGTGGACCCCTAAATGGTGAGACTGGTGTCCTTATAAGAGACAATGGAGTATGCACATGCTGCAGGTaGGCTTCAGGCCCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSGPLNGETGVLIRDNGVCTCCR*ASGPAA Trigger: TGCCGCTGGGCCTGAAGCCCACCTGCAGCATGTGCA...TACTCCATTGTCTCTTATAAGGACACCAGTCTCACCATTTAGGGGTCCACTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACCTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTGCACATGCTGCAGGTaGGCTTCAGGCCCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNLALFWDVCVLGLKLRLCTCCR*ASGPAA Trigger: TGCCGCTGGGCCTGAAGCCCACCTGCAGCATGTGCA...AAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAGGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CAA 72 bp | ACCGGCTCTACTTTGGAAGCTCGTATGAATCGGAGCTaGGAAATGGGACCCCTTCTGACTTGGTACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGSTLEARMNRS*EMGPLLTWYLQ Trigger: CTGAAGGTACCAAGTCAGAAGGGGTCCCATTTCCAAGCTCCGATTCATACGAGCTTCCAAAGTAGAGCCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACCTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTCCTTCTCCGGTCGGGTaGGAACCGTGGGAAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNLALFWDVCVLGLKLRLPSPVG*EPWEMV Trigger: CACCATTTCCCACGGTTCCCACCCGACCGGAGAAGG...AAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAGGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000196304.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTATACCCCTTCTCCGGTCGGGTaGGAACCGTGGGAAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LALFWDVCVLGLKLRLYTPSPVG*EPWEMV Trigger: CACCATTTCCCACGGTTCCCACCCGACCGGAGAAGG...GGTATAAAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000196304.2 |
||
| 3UTR CAA 72 bp | AACAGTCTATTGCTCAAGCCCCCAGTCTCTGACACTTaGCTCTTTGACAGCTCACACAGACTGGCACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLLLKPPVSDT*LFDSSHRLAHS Trigger: TGAATGTGCCAGTCTGTGTGAGCTGTCAAAGAGCAAAGTGTCAGAGACTGGGGGCTTGAGCAATAGACTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR TCA 90 bp | CATAGTGGACCCCTAAATGGTGAGACTGGTGTCCTTATAAGAGACAATGGAGTACGGGCCGACCTTCTGTaGATTTCTTGCTTACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSGPLNGETGVLIRDNGVRADLL*ISCLLC Trigger: GCAGAGTAAGCAAGAAATTCACAGAAGGTCGGCCCG...TACTCCATTGTCTCTTATAAGGACACCAGTCTCACCATTTAGGGGTCCACTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR CCA 90 bp | CATAGTGGACCCCTAAATGGTGAGACTGGTGTCCTTATAAGAGACAATGGAGTAGAGGATCTCGCCCTGTaGACTCTTCTTCCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSGPLNGETGVLIRDNGVEDLAL*TLLPHG Trigger: TCCATGTGGAAGAAGAGTCCACAGGGCGAGATCCTC...TACTCCATTGTCTCTTATAAGGACACCAGTCTCACCATTTAGGGGTCCACTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGTCTCTGACACTTTGCTCTTTGACAGCTCACACAGACTGGCACATTCATTTCTTTTCAGCAGCTaGAGCCGATTTGTATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPVSDTLLFDSSHRLAHSFLFSS*SRFVFG Trigger: ACCAAATACAAATCGGCTCCAGCTGCTGAAAAGAAA...TGAATGTGCCAGTCTGTGTGAGCTGTCAAAGAGCAAAGTGTCAGAGACTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTATACCTGGAGGATCTCGCCCTGTaGACTCTTCTTCCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GFILGCVCSRVKTEALYLEDLAL*TLLPHG Trigger: TCCATGTGGAAGAAGAGTCCACAGGGCGAGATCCTC...CAGGTATAAAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGATGGAGAAATAAAACCTCAATTCTAAGTTCTAGTTTTGTCACCATACCTTCTCCGGTCGGGTaGGAACCGTGGGAAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQRWRNKTSILSSSFVTIPSPVG*EPWEMV Trigger: CACCATTTCCCACGGTTCCCACCCGACCGGAGAAGG...TATGGTGACAAAACTAGAACTTAGAATTGAGGTTTTATTTCTCCATCTCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTATACCTGCGACGGGCCGACCTTCTGTaGATTTCTTGCTTACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FILGCVCSRVKTEALYLRRADLL*ISCLLC Trigger: GCAGAGTAAGCAAGAAATTCACAGAAGGTCGGCCCG...TCGCAGGTATAAAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR TCA 90 bp | CATAGTGGACCCCTAAATGGTGAGACTGGTGTCCTTATAAGAGACAATGGAGTATCCCTTGTAGAAGATTaGCTCTGCAGTGACTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSGPLNGETGVLIRDNGVSLVED*LCSDYG Trigger: ACCATAGTCACTGCAGAGTCAATCTTCTACAAGGGA...TACTCCATTGTCTCTTATAAGGACACCAGTCTCACCATTTAGGGGTCCACTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAACCTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTCCCTTGTAGAAGATTaGCTCTGCAGTGACTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: WKPGFILGCVCSRVKTEASLVED*LCSDYG Trigger: ACCATAGTCACTGCAGAGTCAATCTTCTACAAGGGA...AGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAGGTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| 3UTR CAA 72 bp | CAGACGAATCAAAATTCAATATGTACCGGCTCTACTTaGGAAGCTCGTATGAATCGGAGCTTGGAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTNQNSICTGST*EARMNRSLEMG Trigger: TCCCATTTCCAAGCTCCGATTCATACGAGCTTCCAAAGTAGAGCCGGTACATATTGAATTTTGATTCGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| 3UTR CAA 72 bp | TCCAAATTTCCAGCACATGGTCTGGGTTTGAGTTTTTaGACTATCAAAACTAATGACCTTTCAGTCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKFPAHGLGLSF*TIKTNDLSVPA Trigger: GGCAGGGACTGAAAGGTCATTAGTTTTGATAGTCAAAAAACTCAAACCCAGACCATGTGCTGGAAATTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR CCA 90 bp | TGGAAACCTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTTCTTTTCAGCAGCTaGAGCCGATTTGTATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WKPGFILGCVCSRVKTEAFLFSS*SRFVFG Trigger: ACCAAATACAAATCGGCTCCAGCTGCTGAAAAGAAA...AGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAGGTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS GCA 90 bp | CGTTGCTCTGCGAAGGACCGGCCGAGGTGGTGGCGAAGGTGGTGGTaGCGAAGCCACCGCCGCCGCCGCCACCGCCCCCGGTCCCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RCSAKDRPRWWRRWW*RSHRRRRHRPRSRP Trigger: CGGGCGGGACCGGGGGCGGTGGCGGCGGCGGCGGTGGCTTCGGCACCACCACCTTCGCCACCACCTCGGCCGGTCCTTCGCAGAGCAACG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS GCA 90 bp | CCCCGGTCCCGCCCGCCACTCCCGCGCCGCCGCCGCCCCGGCCCGTaGAGTGATGGCAGAGGATCTCGCCCTGTGGACTCTTCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PRSRPPLPRRRRPGP*SDGRGSRPVDSSST Trigger: TGTGGAAGAAGAGTCCACAGGGCGAGATCCTCTGCCATCACTGCACGGGCCGGGGCGGCGGCGGCGCGGGAGTGGCGGGCGGGACCGGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS TCA 90 bp | GTCCCGCCCGCCACTCCCGCGCCGCCGCCGCCCCGGCCCGTGCAGTaGTGGCAGAGGATCTCGCCCTGTGGACTCTTCTTCCACATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPPATPAPPPPRPVQ*WQRISPCGLFFHME Trigger: CTCCATGTGGAAGAAGAGTCCACAGGGCGAGATCCTCTGCCATCACTGCACGGGCCGGGGCGGCGGCGGCGCGGGAGTGGCGGGCGGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS GCA 90 bp | TTCTGTGAATTTCTTGCTTACTCTGCTTGCCGCCGCCGCCCCCGTTaGTCTGCGAAGGACCGGCCGAGGTGGTGGCGAAGGTGGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FCEFLAYSACRRRPR*SAKDRPRWWRRWWC Trigger: GCACCACCACCTTCGCCACCACCTCGGCCGGTCCTTCGCAGAGCAACGGGGGCGGCGGCGGCAAGCAGAGTAAGCAAGAAATTCACAGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS CCA 90 bp | GCCGCCGCCCCGGCCCGTGCAGTGATGGCAGAGGATCTCGCCCTGTaGACTCTTCTTCCACATGGAGGACGACGTAGTCTTGCACATGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAAPARAVMAEDLAL*TLLPHGGRRSLAHA Trigger: AGCATGTGCAAGACTACGTCGTCCTCCATGTGGAAGAAGAGTCCACAGGGCGAGATCCTCTGCCATCACTGCACGGGCCGGGGCGGCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS-3UTR CAA 90 bp | AACACACCTGTCACACAAGGCAGACGAGGCAGGGATCTCAAGGCCAAGCCAACCTCTTGCTTACTCTGCTaGCCGCCGCCGCCCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTPVTQGRRGRDLKAKPTSCLLC*PPPPPL Trigger: CAACGGGGGCGGCGGCGGCAAGCAGAGTAAGCAAGA...GGTTGGCTTGGCCTTGAGATCCCTGCCTCGTCTGCCTTGTGTGACAGGTGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR CAA 90 bp | GCAAAAACCCAGCCATCTGTAAGCCAGGAAGCAAGCCCTCACACATGGCCATCGGAGGACGACGTAGTCTaGCACATGCTGCAGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AKTQPSVSQEASPHTWPSEDDVV*HMLQVG Trigger: GCCCACCTGCAGCATGTGCAAGACTACGTCGTCCTC...CGATGGCCATGTGTGAGGGCTTGCTTCCTGGCTTACAGATGGCTGGGTTTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR CAA 90 bp | CTATTGCTCAAGCCCCCAGTCTCTGACACTTTGCTCTTTGACAGCTCACACAGATCTTGCTTACTCTGCTaGCCGCCGCCGCCCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLKPPVSDTLLFDSSHRSCLLC*PPPPPL Trigger: CAACGGGGGCGGCGGCGGCAAGCAGAGTAAGCAAGA...TCTGTGTGAGCTGTCAAAGAGCAAAGTGTCAGAGACTGGGGGCTTGAGCAATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS TCA 90 bp | TCTCCGGTCGGGTGGGAACCGTGGGAAATGGTGAGGACCTTGACTTaGAATACTCAGAAGGCGCGTGGCAGACAAATTCCAGGTACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPVGWEPWEMVRTLT*NTQKARGRQIPGTP Trigger: TGGAGTACCTGGAATTTGTCTGCCACGCGCCTTCTGAGTATTTCAAGTCAAGGTCCTCACCATTTCCCACGGTTCCCACCCGACCGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000196304.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGGGAAGCAGAAGCAAGCAGATCTCTTGAGTTCAATGCCAGTCTGGTCTACGAGGACGACGTAGTCTaGCACATGCTGCAGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TWEAEASRSLEFNASLVYEDDVV*HMLQVG Trigger: GCCCACCTGCAGCATGTGCAAGACTACGTCGTCCTC...GTAGACCAGACTGGCATTGAACTCAAGAGATCTGCTTGCTTCTGCTTCCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS CCA 90 bp | GGAAGATCTTCCTCTGGCCCTATTATATATGATGCAGGATCAAACTaGTCTCTGGGACTGGCGAGGGTAGGAATGAGCCATGTCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: GRSSSGPIIYDAGSN*SLGLARVGMSHVSA Trigger: CGCGCTGACATGGCTCATTCCTACCCTCGCCAGTCCCAGAGACCAGTTTGATCCTGCATCATATATAATAGGGCCAGAGGAAGATCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGTCTCTGACACTTTGCTCTTTGACAGCTCACACAGACTGGCACATTCAGGAGCCGATTTGTATTaGGTATTTCTGAGCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPVSDTLLFDSSHRLAHSGADLY*VFLSRA Trigger: GGCCCGGCTCAGAAATACCAAATACAAATCGGCTCC...TGAATGTGCCAGTCTGTGTGAGCTGTCAAAGAGCAAAGTGTCAGAGACTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGATCAAAGATCTGGCTGAAGCAGCTGATGCTGACAGGCAAAGGCAGGTCTGGTACTCCATCTTCCTaGGAAGATCTTCCTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRSKIWLKQLMLTGKGRSGTPSS*EDLPLA Trigger: GGCCAGAGGAAGATCTTCCAAGGAAGATGGAGTACC...AGACCTGCCTTTGCCTGTCAGCATCAGCTGCTTCAGCCAGATCTTTGATCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS CCA 90 bp | CTAAGATGCTGGGCTTCACCTATTATATATGATGCAGGATCAAACTaGTCTCTGGGACTGGCGAGGGTAGGAATGAGCCATGTCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRCWASPIIYDAGSN*SLGLARVGMSHVSA Trigger: CGCGCTGACATGGCTCATTCCTACCCTCGCCAGTCCCAGAGACCAGTTTGATCCTGCATCATATATAATAGGTGAAGCCCAGCATCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGTCTCTGACACTTTGCTCTTTGACAGCTCACACAGACTGGCACATTCAGTACGGCTTCCCATCTaGCTCATCAATCACAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PPVSDTLLFDSSHRLAHSVRLPI*LINHRN Trigger: GTTTCTGTGATTGATGAGCAAGATGGGAAGCCGTAC...TGAATGTGCCAGTCTGTGTGAGCTGTCAAAGAGCAAAGTGTCAGAGACTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS-3UTR CAA 90 bp | AATGGGACCCCTTCTGACTTGGTACCTTCAGCACTTGTAGTTGATGTGATGTGGGGTGAGGACCTTGACTaGAAATACTCAGAAGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: NGTPSDLVPSALVVDVMWGEDLD*KYSEGA Trigger: CGCGCCTTCTGAGTATTTCAAGTCAAGGTCCTCACC...CCACATCACATCAACTACAAGTGCTGAAGGTACCAAGTCAGAAGGGGTCCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140871.2 |
||
| CDS CCA 90 bp | GTGGGAAATGGTGAGGACCTTGACTTGAAATACTCAGAAGGCGCGTaGCAGACAAATTCCAGGTACTCCATCTTCCTTGGAAGATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGNGEDLDLKYSEGA*QTNSRYSIFLGRSS Trigger: GGAAGATCTTCCAAGGAAGATGGAGTACCTGGAATTTGTCTGCCACGCGCCTTCTGAGTATTTCAAGTCAAGGTCCTCACCATTTCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR CAA 90 bp | GCAAAAACCCAGCCATCTGTAAGCCAGGAAGCAAGCCCTCACACATGGCCATCGAACAACGTCACCAATTaGGTAATATACTCCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AKTQPSVSQEASPHTWPSNNVTN*VIYSLV Trigger: TACAAGGGAGTATATTACCAAATTGGTGACGTTGTT...CGATGGCCATGTGTGAGGGCTTGCTTCCTGGCTTACAGATGGCTGGGTTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS CCA 90 bp | ATGTCTTCTCCCTTTTCCTTTCGTGGAAACTTTCTTTTCAGCAGCTaGAGCCGATTTGTATTTGGTATTTCTGAGCCGGGCCGACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MSSPFSFRGNFLFSS*SRFVFGISEPGRPS Trigger: AGAAGGTCGGCCCGGCTCAGAAATACCAAATACAAATCGGCTCCAGCTGCTGAAAAGAAAGTTTCCACGAAAGGAAAAGGGAGAAGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS TCA 90 bp | AAACTTTCTTTTCAGCAGCTGGAGCCGATTTGTATTTGGTATTTCTaGGCCGGGCCGACCTTCTGTGAATTTCTTGCTTACTCTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KLSFQQLEPICIWYF*AGPTFCEFLAYSAC Trigger: GCAAGCAGAGTAAGCAAGAAATTCACAGAAGGTCGGCCCGGCTCAGAAATACCAAATACAAATCGGCTCCAGCTGCTGAAAAGAAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGAAACCTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCCTTCTGTGAATTTCTaGCTTACTCTGCTTGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGNLALFWDVCVLGLKLRPSVNF*LTLLAA Trigger: GGCGGCAAGCAGAGTAAGCAAGAAATTCACAGAAGG...CCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAGGTTTCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTATACGGTGAGGACCTTGACTaGAAATACTCAGAAGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGFILGCVCSRVKTEALYGEDLD*KYSEGA Trigger: CGCGCCTTCTGAGTATTTCAAGTCAAGGTCCTCACC...GTATAAAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000196304.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTATACCTGCGAGGAGCCGATTTGTATTaGGTATTTCTGAGCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FILGCVCSRVKTEALYLRGADLY*VFLSRA Trigger: GGCCCGGCTCAGAAATACCAAATACAAATCGGCTCC...TCGCAGGTATAAAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR CAA 90 bp | AAACCTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTAGGTGAGGACCTTGACTaGAAATACTCAGAAGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: KPGFILGCVCSRVKTEALGEDLD*KYSEGA Trigger: CGCGCCTTCTGAGTATTTCAAGTCAAGGTCCTCACC...TAAAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000196304.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTATACCTGGTACGGCTTCCCATCTaGCTCATCAATCACAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GFILGCVCSRVKTEALYLVRLPI*LINHRN Trigger: GTTTCTGTGATTGATGAGCAAGATGGGAAGCCGTAC...CAGGTATAAAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTTATTTTGGGATGTGTGTGTTCTAGGGTTAAAACTGAGGCTTTATACCAACAACGTCACCAATTaGGTAATATACTCCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LALFWDVCVLGLKLRLYTNNVTN*VIYSLV Trigger: TACAAGGGAGTATATTACCAAATTGGTGACGTTGTT...GGTATAAAGCCTCAGTTTTAACCCTAGAACACACACATCCCAAAATAAAGCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS GCA 72 bp | CGCCCGCCACTCCCGCGCCGCCGCCGCCCCGGCCCGTaGAGTGATGGCAGAGGATCTCGCCCTGTGGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: RPPLPRRRRPGP*SDGRGSRPVDS Trigger: AGAGTCCACAGGGCGAGATCCTCTGCCATCACTGCACGGGCCGGGGCGGCGGCGGCGCGGGAGTGGCGGGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS CCA 72 bp | CGCCCCCGTTGCTCTGCGAAGGACCGGCCGAGGTGGTaGCGAAGGTGGTGGTGCCGAAGCCACCGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPRCSAKDRPRW*RRWWCRSHRRR Trigger: GCGGCGGCGGTGGCTTCGGCACCACCACCTTCGCCACCACCTCGGCCGGTCCTTCGCAGAGCAACGGGGGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS CCA 72 bp | CGCCGCCCCCGTTGCTCTGCGAAGGACCGGCCGAGGTaGTGGCGAAGGTGGTGGTGCCGAAGCCACCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRPRCSAKDRPR*WRRWWCRSHRR Trigger: GCGGCGGTGGCTTCGGCACCACCACCTTCGCCACCACCTCGGCCGGTCCTTCGCAGAGCAACGGGGGCGGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS GCA 72 bp | TTTCTTGCTTACTCTGCTTGCCGCCGCCGCCCCCGTTaGTCTGCGAAGGACCGGCCGAGGTGGTGGCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLAYSACRRRPR*SAKDRPRWWRR Trigger: CCTTCGCCACCACCTCGGCCGGTCCTTCGCAGAGCAACGGGGGCGGCGGCGGCAAGCAGAGTAAGCAAGAAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS CAA 72 bp | ATTTCTTGCTTACTCTGCTTGCCGCCGCCGCCCCCGTaGCTCTGCGAAGGACCGGCCGAGGTGGTGGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ISCLLCLPPPPP*LCEGPAEVVAK Trigger: CTTCGCCACCACCTCGGCCGGTCCTTCGCAGAGCAACGGGGGCGGCGGCGGCAAGCAGAGTAAGCAAGAAAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS CCA 72 bp | CCGGCCCGTGCAGTGATGGCAGAGGATCTCGCCCTGTaGACTCTTCTTCCACATGGAGGACGACGTAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PARAVMAEDLAL*TLLPHGGRRSL Trigger: AAGACTACGTCGTCCTCCATGTGGAAGAAGAGTCCACAGGGCGAGATCCTCTGCCATCACTGCACGGGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS CAA 72 bp | TGTGGACTCTTCTTCCACATGGAGGACGACGTAGTCTaGCACATGCTGCAGGTGGGCTTCAGGCCCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CGLFFHMEDDVV*HMLQVGFRPSG Trigger: GCCGCTGGGCCTGAAGCCCACCTGCAGCATGTGCAAGACTACGTCGTCCTCCATGTGGAAGAAGAGTCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS CAA 90 bp | TTCTCCGGTCGGGTGGGAACCGTGGGAAATGGTGAGGACCTTGACTaGAAATACTCAGAAGGCGCGTGGCAGACAAATTCCAGGTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: FSGRVGTVGNGEDLD*KYSEGAWQTNSRYS Trigger: GGAGTACCTGGAATTTGTCTGCCACGCGCCTTCTGAGTATTTCAAGTCAAGGTCCTCACCATTTCCCACGGTTCCCACCCGACCGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000196304.2 |
||
| CDS TCA 72 bp | TTGTATTTGGTATTTCTGAGCCGGGCCGACCTTCTGTaGATTTCTTGCTTACTCTGCTTGCCGCCGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LYLVFLSRADLL*ISCLLCLPPPP Trigger: GGGCGGCGGCGGCAAGCAGAGTAAGCAAGAAATTCACAGAAGGTCGGCCCGGCTCAGAAATACCAAATACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS CAA 72 bp | CGGGTGGGAACCGTGGGAAATGGTGAGGACCTTGACTaGAAATACTCAGAAGGCGCGTGGCAGACAAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVGTVGNGEDLD*KYSEGAWQTNS Trigger: GGAATTTGTCTGCCACGCGCCTTCTGAGTATTTCAAGTCAAGGTCCTCACCATTTCCCACGGTTCCCACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000196304.2 |
||
| CDS TCA 72 bp | GGGTGGGAACCGTGGGAAATGGTGAGGACCTTGACTTaGAATACTCAGAAGGCGCGTGGCAGACAAATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GWEPWEMVRTLT*NTQKARGRQIP Trigger: TGGAATTTGTCTGCCACGCGCCTTCTGAGTATTTCAAGTCAAGGTCCTCACCATTTCCCACGGTTCCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000196304.2 |
||
| CDS CCA 72 bp | TCCTCTGGCCCTATTATATATGATGCAGGATCAAACTaGTCTCTGGGACTGGCGAGGGTAGGAATGAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SSGPIIYDAGSN*SLGLARVGMSH Trigger: ATGGCTCATTCCTACCCTCGCCAGTCCCAGAGACCAGTTTGATCCTGCATCATATATAATAGGGCCAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS CCA 72 bp | GGTGAGGACCTTGACTTGAAATACTCAGAAGGCGCGTaGCAGACAAATTCCAGGTACTCCATCTTCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GEDLDLKYSEGA*QTNSRYSIFLG Trigger: TCCAAGGAAGATGGAGTACCTGGAATTTGTCTGCCACGCGCCTTCTGAGTATTTCAAGTCAAGGTCCTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007559.15 |
||
| CDS CCA 72 bp | TGGGCTTCACCTATTATATATGATGCAGGATCAAACTaGTCTCTGGGACTGGCGAGGGTAGGAATGAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WASPIIYDAGSN*SLGLARVGMSH Trigger: ATGGCTCATTCCTACCCTCGCCAGTCCCAGAGACCAGTTTGATCCTGCATCATATATAATAGGTGAAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119783.2 |
||
| CDS CAA 72 bp | TTCGTGGAAACTTTCTTTTCAGCAGCTGGAGCCGATTaGTATTTGGTATTTCTGAGCCGGGCCGACCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: FVETFFSAAGAD*YLVFLSRADLL Trigger: CAGAAGGTCGGCCCGGCTCAGAAATACCAAATACAAATCGGCTCCAGCTGCTGAAAAGAAAGTTTCCACGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||
| CDS TCA 72 bp | TTTCAGCAGCTGGAGCCGATTTGTATTTGGTATTTCTaGGCCGGGCCGACCTTCTGTGAATTTCTTGCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: FQQLEPICIWYF*AGPTFCEFLAY Trigger: GTAAGCAAGAAATTCACAGAAGGTCGGCCCGGCTCAGAAATACCAAATACAAATCGGCTCCAGCTGCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007559.15 ENSMUST00000119783.2 |
||