Pregenerated sensors for GATA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005836Ensembl transcript IDs: ENSMUST00000047762.10, ENSMUST00000234512.2, ENSMUST00000235081.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAAGCAGCCCAGGCTGGCAGGAGCAGGCCACATGCCCACGGTGCTaGCCCTTCCTGCAAAAGCCCATCTCTTCTTACTTCAGTAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: GSSPGWQEQATCPRC*PFLQKPISSYFSKL Trigger: AAGCTTACTGAAGTAAGAAGAGATGGGCTTTTGCAGGAAGGGCCAGCACCGTGGGCATGTGGCCTGCTCCTGCCAGCCTGGGCTGCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR GCA 90 bp | CGCATCGAAGGAATGTTATGTCTGCATTTTTGCTGCCATCTGGACTaGTGGACAATATCAGACACAAGTGGTATGAGGCCTTCAGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: RIEGMLCLHFCCHLD*WTISDTSGMRPSEP Trigger: GGGCTCTGAAGGCCTCATACCACTTGTGTCTGATATTGTCCAGCAGTCCAGATGGCAGCAAAAATGCAGACATAACATTCCTTCGATGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR CCA 90 bp | ATCGAAGGAATGTTATGTCTGCATTTTTGCTGCCATCTGGACTGCTaGACAATATCAGACACAAGTGGTATGAGGCCTTCAGAGCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: IEGMLCLHFCCHLDC*TISDTSGMRPSEPS Trigger: GGAGGGCTCTGAAGGCCTCATACCACTTGTGTCTGATATTGTCCAGCAGTCCAGATGGCAGCAAAAATGCAGACATAACATTCCTTCGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR TCA 90 bp | TGTGCACGGTGGTCGGGGATGAATGGGTTCTGGGATAACCGAGGTTaGTCACAAGAAGCACATGATTTGGAGCAATACACAAACATTTTC | + |
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Preference number: 1 (lower is better) Translates to: CARWSGMNGFWDNRG*SQEAHDLEQYTNIF Trigger: GAAAATGTTTGTGTATTGCTCCAAATCATGTGCTTCTTGTGATCAACCTCGGTTATCCCAGAACCCATTCATCCCCGACCACCGTGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR GCA 90 bp | AAGGCACAGAAATCACGCATCGAAGGAATGTTATGTCTGCATTTTTaGTGCCATCTGGACTGCTGGACAATATCAGACACAAGTGGTATG | + |
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Preference number: 1 (lower is better) Translates to: KAQKSRIEGMLCLHF*CHLDCWTISDTSGM Trigger: CATACCACTTGTGTCTGATATTGTCCAGCAGTCCAGATGGCAGCAAAAATGCAGACATAACATTCCTTCGATGCGTGATTTCTGTGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR GCA 90 bp | ATGAACGTTGAGATAAGTCAGTCAGTGTCTGTCATGATGCAATCTTaGAAATTAATATTCTTGTTGAGACCCCAGGAATGCACTCCGCCT | + |
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Preference number: 1 (lower is better) Translates to: MNVEISQSVSVMMQS*KLIFLLRPQECTPP Trigger: AGGCGGAGTGCATTCCTGGGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACACTGACTGACTTATCTCAACGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR TCA 90 bp | TACAAATTCCAAGTGACCTCAGATCAGCCACGTTACGATGAACGTTaGGATAAGTCAGTCAGTGTCTGTCATGATGCAATCTTGCAAATT | + |
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Preference number: 1 (lower is better) Translates to: YKFQVTSDQPRYDER*DKSVSVCHDAILQI Trigger: AATTTGCAAGATTGCATCATGACAGACACTGACTGACTTATCTCAACGTTCATCGTAACGTGGCTGATCTGAGGTCACTTGGAATTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR TCA 90 bp | TGGAAGAAAAATATCTTGTTTGCTACCCTGTTTACAAATTCCAAGTaGCCTCAGATCAGCCACGTTACGATGAACGTTGAGATAAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: WKKNILFATLFTNSK*PQISHVTMNVEISQ Trigger: CTGACTTATCTCAACGTTCATCGTAACGTGGCTGATCTGAGGTCACTTGGAATTTGTAAACAGGGTAGCAAACAAGATATTTTTCTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR CCA 90 bp | TCCACGAACGCTTGTGAAATGTGCACGGTGGTCGGGGATGAATGGGTTCTGGGAGGAAGCAGCCCAGGCTaGCAGGAGCAGGCCACATGC | + |
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Preference number: 2 (lower is better) Translates to: STNACEMCTVVGDEWVLGGSSPG*QEQATC Trigger: GCATGTGGCCTGCTCCTGCCAGCCTGGGCTGCTTCC...TCCCAGAACCCATTCATCCCCGACCACCGTGCACATTTCACAAGCGTTCGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR GCA 90 bp | TCCACGAACGCTTGTGAAATGTGCACGGTGGTCGGGGATGAATGGGTTCTGGGAGCCACATGCCCACGGTaGTGGCCCTTCCTGCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: STNACEMCTVVGDEWVLGATCPR*WPFLQK Trigger: CTTTTGCAGGAAGGGCCAGCACCGTGGGCATGTGGC...TCCCAGAACCCATTCATCCCCGACCACCGTGCACATTTCACAAGCGTTCGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR CCA 90 bp | TCCACGAACGCTTGTGAAATGTGCACGGTGGTCGGGGATGAATGGGTTCTGGGATTTCTCCCACTGGTATaGGGCAGAGTCAGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: STNACEMCTVVGDEWVLGFLPLV*GRVRGR Trigger: CCTGCCTCTGACTCTGCCCCATACCAGTGGGAGAAA...TCCCAGAACCCATTCATCCCCGACCACCGTGCACATTTCACAAGCGTTCGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR TCA 90 bp | GGTTCTGGGATAACCGAGGTTGATCACAAGAAGCACATGATTTGGAGCAATACACAGACACAAGTGGTATaGGGCCTTCAGAGCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GSGITEVDHKKHMIWSNTQTQVV*GLQSPP Trigger: AGGAGGGCTCTGAAGGCCTCATACCACTTGTGTCTG...TGTATTGCTCCAAATCATGTGCTTCTTGTGATCAACCTCGGTTATCCCAGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR CCA 90 bp | TTTAAACAATTGGGAACACAGAAGTGGGCTGTGAGTGTAAGAAGCATATGTCTAACATGCCCACGGTGCTaGCCCTTCCTGCAAAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: FKQLGTQKWAVSVRSICLTCPRC*PFLQKP Trigger: GGGCTTTTGCAGGAAGGGCCAGCACCGTGGGCATGT...TAGACATATGCTTCTTACACTCACAGCCCACTTCTGTGTTCCCAATTGTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR GCA 90 bp | CTTGTTTGCTACCCTGTTTACAAATTCCAAGTGACCTCAGATCAGCCACGTTACTTATGTCTGCATTTTTaGTGCCATCTGGACTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LVCYPVYKFQVTSDQPRYLCLHF*CHLDCW Trigger: CCAGCAGTCCAGATGGCAGCAAAAATGCAGACATAA...GTAACGTGGCTGATCTGAGGTCACTTGGAATTTGTAAACAGGGTAGCAAACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR CCA 90 bp | CAGTCAGTGTCTGTCATGATGCAATCTTGCAAATTAATATTCTTGTTGAGACCCAATATCAGACACAAGTaGTATGAGGCCTTCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: QSVSVMMQSCKLIFLLRPNIRHK*YEAFRA Trigger: GGCTCTGAAGGCCTCATACCACTTGTGTCTGATATT...GGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACACTGACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR TCA 90 bp | TTTAAACAATTGGGAACACAGAAGTGGGCTGTGAGTGTAAGAAGCATATGTCTATTTACAAATTCCAAGTaGCCTCAGATCAGCCACGTT | + |
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Preference number: 2 (lower is better) Translates to: FKQLGTQKWAVSVRSICLFTNSK*PQISHV Trigger: AACGTGGCTGATCTGAGGTCACTTGGAATTTGTAAA...TAGACATATGCTTCTTACACTCACAGCCCACTTCTGTGTTCCCAATTGTTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR GCA 90 bp | TTTAAACAATTGGGAACACAGAAGTGGGCTGTGAGTGTAAGAAGCATATGTCTAAAGGAATGTTATGTCTaGATTTTTGCTGCCATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FKQLGTQKWAVSVRSICLKECYV*IFAAIW Trigger: CCAGATGGCAGCAAAAATGCAGACATAACATTCCTT...TAGACATATGCTTCTTACACTCACAGCCCACTTCTGTGTTCCCAATTGTTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR GCA 72 bp | AGCCCAGGCTGGCAGGAGCAGGCCACATGCCCACGGTaGTGGCCCTTCCTGCAAAAGCCCATCTCTTCTTAC | + |
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Preference number: 3 (lower is better) Translates to: SPGWQEQATCPR*WPFLQKPISSY Trigger: GTAAGAAGAGATGGGCTTTTGCAGGAAGGGCCAGCACCGTGGGCATGTGGCCTGCTCCTGCCAGCCTGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR CCA 72 bp | CCAGGCTGGCAGGAGCAGGCCACATGCCCACGGTGCTaGCCCTTCCTGCAAAAGCCCATCTCTTCTTACTTC | + |
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Preference number: 3 (lower is better) Translates to: PGWQEQATCPRC*PFLQKPISSYF Trigger: GAAGTAAGAAGAGATGGGCTTTTGCAGGAAGGGCCAGCACCGTGGGCATGTGGCCTGCTCCTGCCAGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR GCA 72 bp | GCACTCCGCCTCCAGGATAGACCAAATGGCTCCCAGTaGTCCTCTCCACGAACGCTTGTGAAATGTGCACGG | + |
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Preference number: 3 (lower is better) Translates to: ALRLQDRPNGSQ*SSPRTLVKCAR Trigger: CCGTGCACATTTCACAAGCGTTCGTGGAGAGGAGCACTGGGAGCCATTTGGTCTATCCTGGAGGCGGAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR GCA 72 bp | AGGAGCAGGCCACATGCCCACGGTGCTGGCCCTTCCTaGAAAAGCCCATCTCTTCTTACTTCAGTAAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: RSRPHAHGAGPS*KSPSLLTSVSF Trigger: GAAGCTTACTGAAGTAAGAAGAGATGGGCTTTTGCAGGAAGGGCCAGCACCGTGGGCATGTGGCCTGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR CCA 72 bp | CTGCCATCTGGACTGCTGGACAATATCAGACACAAGTaGTATGAGGCCTTCAGAGCCCTCCTTGCCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: LPSGLLDNIRHK*YEAFRALLASW Trigger: CCAAGAGGCAAGGAGGGCTCTGAAGGCCTCATACCACTTGTGTCTGATATTGTCCAGCAGTCCAGATGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR CAA 90 bp | CTTGTTTGCTACCCTGTTTACAAATTCCAAGTGACCTCAGATCAGCCACGTTACACAAGGCCCCGGTCATaGTCACAGTTTCTCCCACTG | + |
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Preference number: 3 (lower is better) Translates to: LVCYPVYKFQVTSDQPRYTRPRS*SQFLPL Trigger: CAGTGGGAGAAACTGTGACAATGACCGGGGCCTTGT...GTAACGTGGCTGATCTGAGGTCACTTGGAATTTGTAAACAGGGTAGCAAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR TCA 72 bp | TGGTCGGGGATGAATGGGTTCTGGGATAACCGAGGTTaGTCACAAGAAGCACATGATTTGGAGCAATACACA | + |
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Preference number: 3 (lower is better) Translates to: WSGMNGFWDNRG*SQEAHDLEQYT Trigger: TGTGTATTGCTCCAAATCATGTGCTTCTTGTGATCAACCTCGGTTATCCCAGAACCCATTCATCCCCGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCTACCCTGTTTACAAATTCCAAGTGACCTCAGATCAGCCACGTTACGATGTTATGTCTGCATTTTaGCTGCCATCTGGACTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VCYPVYKFQVTSDQPRYDVMSAF*LPSGLL Trigger: CAGCAGTCCAGATGGCAGCAAAAATGCAGACATAAC...ATCGTAACGTGGCTGATCTGAGGTCACTTGGAATTTGTAAACAGGGTAGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR TCA 72 bp | CAAGTGACCTCAGATCAGCCACGTTACGATGAACGTTaGGATAAGTCAGTCAGTGTCTGTCATGATGCAATC | + |
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Preference number: 3 (lower is better) Translates to: QVTSDQPRYDER*DKSVSVCHDAI Trigger: GATTGCATCATGACAGACACTGACTGACTTATCTCAACGTTCATCGTAACGTGGCTGATCTGAGGTCACTTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR GCA 72 bp | AAATCACGCATCGAAGGAATGTTATGTCTGCATTTTTaGTGCCATCTGGACTGCTGGACAATATCAGACACA | + |
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Preference number: 3 (lower is better) Translates to: KSRIEGMLCLHF*CHLDCWTISDT Trigger: TGTGTCTGATATTGTCCAGCAGTCCAGATGGCAGCAAAAATGCAGACATAACATTCCTTCGATGCGTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGTTGGTCACGTGGTACAGGCGTCAAGAGTGTTACAGATACTTAGAATATAGAACGGGGACTGTGTaGGTGTTCTTGTATAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: CGLVTWYRRQECYRYLEYRTGTV*VFLYKN Trigger: ATTTTTATACAAGAACACCAACACAGTCCCCGTTCT...ATATTCTAAGTATCTGTAACACTCTTGACGCCTGTACCACGTGACCAACCCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| 3UTR TCA 72 bp | AATATCTTGTTTGCTACCCTGTTTACAAATTCCAAGTaGCCTCAGATCAGCCACGTTACGATGAACGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: NILFATLFTNSK*PQISHVTMNVE Trigger: CTCAACGTTCATCGTAACGTGGCTGATCTGAGGTCACTTGGAATTTGTAAACAGGGTAGCAAACAAGATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | TCCACGAACGCTTGTGAAATGTGCACGGTGGTCGGGGATGAATGGGTTCTGGGACGGCGCCGTTGGCCATaGGCGGGCTGGGCGAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: STNACEMCTVVGDEWVLGRRRWP*AGWASR Trigger: CCTACTCGCCCAGCCCGCCCATGGCCAACGGCGCCG...TCCCAGAACCCATTCATCCCCGACCACCGTGCACATTTCACAAGCGTTCGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR GCA 90 bp | AGACAAGGCCCCGGTCATTGTCACAGTTTCTCCCACTGGTATGGGGCAGAGTCATCCACTCACACTGCCTaGGCCCGTGCCGCCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RQGPGHCHSFSHWYGAESSTHTA*ARAARS Trigger: GCTGCGGGCGGCACGGGCGCAGGCAGTGTGAGTGGA...TGACTCTGCCCCATACCAGTGGGAGAAACTGTGACAATGACCGGGGCCTTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | AGACAAGGCCCCGGTCATTGTCACAGTTTCTCCCACTGGTATGGGGCAGAGTCACTGTCGGCGGAGGCCTaGGACCAGCCTGGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RQGPGHCHSFSHWYGAESLSAEA*DQPGWA Trigger: TGCCCACCCAGGCTGGTCCCAGGCCTCCGCCGACAG...TGACTCTGCCCCATACCAGTGGGAGAAACTGTGACAATGACCGGGGCCTTGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | AGACAAGGCCCCGGTCATTGTCACAGTTTCTCCCACTGGTATGGGGCAGAGTCAAGCCCCGAAACGCTTTaGCAGGCACCAGCCGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: RQGPGHCHSFSHWYGAESSPETL*QAPAAV Trigger: GACGGCGGCTGGTGCCTGCCAAAGCGTTTCGGGGCT...TGACTCTGCCCCATACCAGTGGGAGAAACTGTGACAATGACCGGGGCCTTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | AGACAAGGCCCCGGTCATTGTCACAGTTTCTCCCACTGGTATGGGGCAGAGTCATGGCCATGGGCGGGCTaGGCGAGTAGGGAAAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: RQGPGHCHSFSHWYGAESWPWAG*ASRESV Trigger: CACGCTTTCCCTACTCGCCCAGCCCGCCCATGGCCA...TGACTCTGCCCCATACCAGTGGGAGAAACTGTGACAATGACCGGGGCCTTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR TCA 90 bp | TCCACGAACGCTTGTGAAATGTGCACGGTGGTCGGGGATGAATGGGTTCTGGGAGTCGCACGGAGGATGTaGCTTCGGCAGGGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: STNACEMCTVVGDEWVLGVARRM*LRQGRT Trigger: TGTCCTCCCCTGCCGAAGTCACATCCTCCGTGCGAC...TCCCAGAACCCATTCATCCCCGACCACCGTGCACATTTCACAAGCGTTCGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | CTGGACTGCTGGACAATATCAGACACAAGTGGTATGAGGCCTTCAGAGCCCTCCGTTTGGCGCCCCGGCTaGACCACAACAGCTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LDCWTISDTSGMRPSEPSVWRPG*TTTACW Trigger: CCAGCAAGCTGTTGTGGTCCAGCCGGGGCGCCAAAC...GGAGGGCTCTGAAGGCCTCATACCACTTGTGTCTGATATTGTCCAGCAGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR TCA 90 bp | AGACAAGGCCCCGGTCATTGTCACAGTTTCTCCCACTGGTATGGGGCAGAGTCACCTGATCGAGGTCAGTaGAGAGCAACAGGTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RQGPGHCHSFSHWYGAESPDRGQ*RATGPP Trigger: GGGAGGACCTGTTGCTCTTCACTGACCTCGATCAGG...TGACTCTGCCCCATACCAGTGGGAGAAACTGTGACAATGACCGGGGCCTTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | TTGCAAATTAATATTCTTGTTGAGACCCCAGGAATGCACTCCGCCTCCAGGATAGGAGGGCTCCCGCGCTaGAAAGGGCCCGGAGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: LQINILVETPGMHSASRIGGLPR*KGPGVA Trigger: GGCGACTCCGGGCCCTTTCCAGCGCGGGAGCCCTCC...TATCCTGGAGGCGGAGTGCATTCCTGGGGTCTCAACAAGAATATTAATTTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | CTGGACTGCTGGACAATATCAGACACAAGTGGTATGAGGCCTTCAGAGCCCTCCAGGCACGCGCTTCTGTaGCTTGATGAGGGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LDCWTISDTSGMRPSEPSRHALL*LDEGPA Trigger: AGCAGGCCCCTCATCAAGCCACAGAAGCGCGTGCCT...GGAGGGCTCTGAAGGCCTCATACCACTTGTGTCTGATATTGTCCAGCAGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | GTTTGCTACCCTGTTTACAAATTCCAAGTGACCTCAGATCAGCCACGTTACGATAGCCCACGCGCGTGGTaGGCACGTAGACCGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VCYPVYKFQVTSDQPRYDSPRAW*ARRPGS Trigger: GCTCCCCGGTCTACGTGCCCACCACGCGCGTGGGCT...ATCGTAACGTGGCTGATCTGAGGTCACTTGGAATTTGTAAACAGGGTAGCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | CTTGTTTGCTACCCTGTTTACAAATTCCAAGTGACCTCAGATCAGCCACGTTACTGGAGCCCACGCGCGTaGTGGGCACGTAGACCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LVCYPVYKFQVTSDQPRYWSPRA*WARRPG Trigger: CCCCGGTCTACGTGCCCACCACGCGCGTGGGCTCCA...GTAACGTGGCTGATCTGAGGTCACTTGGAATTTGTAAACAGGGTAGCAAACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | GGTTCTGGGATAACCGAGGTTGATCACAAGAAGCACATGATTTGGAGCAATACAGCAGGCCGGACAGCATaGAGCCCACGCGCGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GSGITEVDHKKHMIWSNTAGRTA*SPRAWW Trigger: CCACCACGCGCGTGGGCTCCATGCTGTCCGGCCTGC...TGTATTGCTCCAAATCATGTGCTTCTTGTGATCAACCTCGGTTATCCCAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR TCA 90 bp | TTGCAAATTAATATTCTTGTTGAGACCCCAGGAATGCACTCCGCCTCCAGGATACTGGCGGTCGCGGCCTaGTCGAGGTCAGTGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LQINILVETPGMHSASRILAVAA*SRSVKS Trigger: GCTCTTCACTGACCTCGATCAGGCCGCGACCGCCAG...TATCCTGGAGGCGGAGTGCATTCCTGGGGTCTCAACAAGAATATTAATTTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR GCA 90 bp | TCTTTCAAAACAAAGGCACAGAAATCACGCATCGAAGGAATGTTATGTCTGCATCACTGCCTGCGCCCGTaGCGCCCGCAGCCACGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SFKTKAQKSRIEGMLCLHHCLRP*RPQPRS Trigger: GCTACGTGGCTGCGGGCGGCACGGGCGCAGGCAGTG...ATGCAGACATAACATTCCTTCGATGCGTGATTTCTGTGCCTTTGTTTTGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR GCA 90 bp | TTGCAAATTAATATTCTTGTTGAGACCCCAGGAATGCACTCCGCCTCCAGGATAAGCGAGCTGTACTGGTaGTCCCGGCCACCCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: LQINILVETPGMHSASRISELYW*SRPPMA Trigger: GGCCATGGGTGGCCGGGAGCACCAGTACAGCTCGCT...TATCCTGGAGGCGGAGTGCATTCCTGGGGTCTCAACAAGAATATTAATTTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | TTGCAAATTAATATTCTTGTTGAGACCCCAGGAATGCACTCCGCCTCCAGGATACGAAGGGGCTCAGTTTaGCGCCCCGGCTGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: LQINILVETPGMHSASRIRRGSV*RPGWTT Trigger: TGTGGTCCAGCCGGGGCGCCAAACTGAGCCCCTTCG...TATCCTGGAGGCGGAGTGCATTCCTGGGGTCTCAACAAGAATATTAATTTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS-3UTR CCA 90 bp | CTGGACTGCTGGACAATATCAGACACAAGTGGTATGAGGCCTTCAGAGCCCTCCTTGTGGTGTGACAGTTaGCACAGGACAGTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDCWTISDTSGMRPSEPSLWCDS*HRTVQA Trigger: GGCTTGGACTGTCCTGTGCCAACTGTCACACCACAA...GGAGGGCTCTGAAGGCCTCATACCACTTGTGTCTGATATTGTCCAGCAGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR TCA 90 bp | CTGGACTGCTGGACAATATCAGACACAAGTGGTATGAGGCCTTCAGAGCCCTCCCTTGACCTGAATACTTaGGGTCACTGTTCTCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LDCWTISDTSGMRPSEPSLDLNT*GHCSRG Trigger: ACCCCGAGAACAGTGACCTCAAGTATTCAGGTCAAG...GGAGGGCTCTGAAGGCCTCATACCACTTGTGTCTGATATTGTCCAGCAGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR GCA 90 bp | TTTAAACAATTGGGAACACAGAAGTGGGCTGTGAGTGTAAGAAGCATATGTCTACGAGCTGCGGCGTCCTaGAGTTGCTGGCGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKQLGTQKWAVSVRSICLRAAAS*SCWRRR Trigger: CCTGCGGCGCCAGCAACTGCAGGACGCCGCAGCTCG...TAGACATATGCTTCTTACACTCACAGCCCACTTCTGTGTTCCCAATTGTTTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTGTCTGTCATGATGCAATCTTGCAAATTAATATTCTTGTTGAGACCCTGTGCTGGGGCCCCGTaGCACCGGGAGTGGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSVSVMMQSCKLIFLLRPCAGAP*HREWSS Trigger: GGAGCTCCACTCCCGGTGCCACGGGGCCCCAGCACA...GGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACACTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR GCA 90 bp | TTGCAAATTAATATTCTTGTTGAGACCCCAGGAATGCACTCCGCCTCCAGGATATGGACCACAACAGCTTaGTGGCGGTCGCGGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQINILVETPGMHSASRIWTTTA*WRSRPD Trigger: ATCAGGCCGCGACCGCCAGCAAGCTGTTGTGGTCCA...TATCCTGGAGGCGGAGTGCATTCCTGGGGTCTCAACAAGAATATTAATTTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CCA 90 bp | GTTTGCTACCCTGTTTACAAATTCCAAGTGACCTCAGATCAGCCACGTTACGATACCACAACAGCTTGCTaGCGGTCGCGGCCTGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: VCYPVYKFQVTSDQPRYDTTTAC*RSRPDR Trigger: TCGATCAGGCCGCGACCGCCAGCAAGCTGTTGTGGT...ATCGTAACGTGGCTGATCTGAGGTCACTTGGAATTTGTAAACAGGGTAGCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CCA 90 bp | CTTGTTTGCTACCCTGTTTACAAATTCCAAGTGACCTCAGATCAGCCACGTTACACAGTGGCGTCTGGATaGAGCCGCAGTTCACGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LVCYPVYKFQVTSDQPRYTVASG*SRSSRT Trigger: AGTGCGTGAACTGCGGCTCCATCCAGACGCCACTGT...GTAACGTGGCTGATCTGAGGTCACTTGGAATTTGTAAACAGGGTAGCAAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR GCA 90 bp | TCTTTTAAACAATTGGGAACACAGAAGTGGGCTGTGAGTGTAAGAAGCATATGTTACATTTCCTCCGGCTaGTCGGCCGCGAAGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFKQLGTQKWAVSVRSICYISSG*SAAKGL Trigger: GAGCCCCTTCGCGGCCGAGCAGCCGGAGGAAATGTA...ACATATGCTTCTTACACTCACAGCCCACTTCTGTGTTCCCAATTGTTTAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTGTCTGTCATGATGCAATCTTGCAAATTAATATTCTTGTTGAGACCCGTTCAGCGGCCGAGCTaGGGACAGCGAGCTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: QSVSVMMQSCKLIFLLRPVQRPS*GQRAVL Trigger: CAGTACAGCTCGCTGTCCGCAGCTCGGCCGCTGAAC...GGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACACTGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGTGTCTGTCATGATGCAATCTTGCAAATTAATATTCTTGTTGAGACCCAGGGCGGCGAGGGTCTaGTACATTTCCTCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSVSVMMQSCKLIFLLRPRAARV*YISSGC Trigger: GCAGCCGGAGGAAATGTACCAGACCCTCGCCGCCCT...GGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACACTGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CCA 90 bp | TTTAAACAATTGGGAACACAGAAGTGGGCTGTGAGTGTAAGAAGCATATGTCTAGACAGCGAGCTGTACTaGTGCTCCCGGCCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FKQLGTQKWAVSVRSICLDSELY*CSRPPM Trigger: CATGGGTGGCCGGGAGCACCAGTACAGCTCGCTGTC...TAGACATATGCTTCTTACACTCACAGCCCACTTCTGTGTTCCCAATTGTTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CCA 90 bp | TTGCAAATTAATATTCTTGTTGAGACCCCAGGAATGCACTCCGCCTCCAGGATACACTGTTCTCGGGGTTaGCGTTTTCTCCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQINILVETPGMHSASRIHCSRG*RFLPLQ Trigger: CTGCAGTGGGAGAAAACGCCAACCCCGAGAACAGTG...TATCCTGGAGGCGGAGTGCATTCCTGGGGTCTCAACAAGAATATTAATTTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTGTCTGTCATGATGCAATCTTGCAAATTAATATTCTTGTTGAGACCCCGTTTCGAAGGGTCCTaGTGGCCAGGCAGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSVSVMMQSCKLIFLLRPRFEGS*WPGRSQ Trigger: CTGACTCCTGCCTGGCCAGCAGGACCCTTCGAAACG...GGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACACTGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CCA 90 bp | TCTTTCAAAACAAAGGCACAGAAATCACGCATCGAAGGAATGTTATGTCTGCATGTCTCGTCTCCACAGTaGCGTCTGGATGGAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFKTKAQKSRIEGMLCLHVSSPQ*RLDGAA Trigger: TGCGGCTCCATCCAGACGCCACTGTGGAGACGAGAC...ATGCAGACATAACATTCCTTCGATGCGTGATTTCTGTGCCTTTGTTTTGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CCA 90 bp | ATGAACGTTGAGATAAGTCAGTCAGTGTCTGTCATGATGCAATCTTGCAAATTACTCCACAGTGGCGTCTaGATGGAGCCGCAGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: MNVEISQSVSVMMQSCKLLHSGV*MEPQFT Trigger: CGTGAACTGCGGCTCCATCCAGACGCCACTGTGGAG...TAATTTGCAAGATTGCATCATGACAGACACTGACTGACTTATCTCAACGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| 3UTR CAA 72 bp | GTGTCTGTCATGATGCAATCTTGCAAATTAATATTCTaGTTGAGACCCCAGGAATGCACTCCGCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVMMQSCKLIF*LRPQECTPPPG Trigger: TCCTGGAGGCGGAGTGCATTCCTGGGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR GCA 90 bp | CAGTCAGTGTCTGTCATGATGCAATCTTGCAAATTAATATTCTTGTTGAGACCCAGAGACCGCATGCATTaGACAGGTAATGACCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSVSVMMQSCKLIFLLRPRDRMH*TGNDRC Trigger: GCACCGGTCATTACCTGTGCAATGCATGCGGTCTCT...GGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACACTGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR TCA 90 bp | TCTTTTAAACAATTGGGAACACAGAAGTGGGCTGTGAGTGTAAGAAGCATATGTTTTGGTGCAGTCATCTaGATTAGAAGAAGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFKQLGTQKWAVSVRSICFGAVI*IRRRGS Trigger: ACTTCCTCTTCTTCTAATTCAGATGACTGCACCAAA...ACATATGCTTCTTACACTCACAGCCCACTTCTGTGTTCCCAATTGTTTAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS GCA 90 bp | GGCCCGGAGGTCCCGCCACCGCCTCGGCGTCGAGCTGCGGCGTCCTaGAGTTGCTGGCGCCGCAGGGACCGCGATCCCCGCCCCGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPEVPPPPRRRAAAS*SCWRRRDRDPRPGS Trigger: GCTCCCGGGGCGGGGATCGCGGTCCCTGCGGCGCCAGCAACTGCAGGACGCCGCAGCTCGACGCCGAGGCGGTGGCGGGACCTCCGGGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
||
| CDS GCA 90 bp | GCCACCCATGGCCGCCAGGCTGCCGCCACCTCCACTCACACTGCCTaGGCCCGTGCCGCCCGCAGCCACGTAGCCCCCGGGGTCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ATHGRQAAATSTHTA*ARAARSHVAPGVSR Trigger: GCGCGAGACCCCGGGGGCTACGTGGCTGCGGGCGGCACGGGCGCAGGCAGTGTGAGTGGAGGTGGCGGCAGCCTGGCGGCCATGGGTGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS TCA 90 bp | CCGCGGCTCCGTGGGCAGCGGCGAAGGGATGCGAGGCGTAGGGGCTaGGCAAGAGCGAGCGGCCCGGAGGTCCCGCCACCGCCTCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRLRGQRRRDARRRG*ARASGPEVPPPPRR Trigger: ACGCCGAGGCGGTGGCGGGACCTCCGGGCCGCTCGCTCTTGCTCAGCCCCTACGCCTCGCATCCCTTCGCCGCTGCCCACGGAGCCGCGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
||
| CDS GCA 90 bp | AAGAGCGAGCGGCCCGGAGGTCCCGCCACCGCCTCGGCGTCGAGCTaGGGCGTCCTGCAGTTGCTGGCGCCGCAGGGACCGCGATCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KSERPGGPATASASS*GVLQLLAPQGPRSP Trigger: CGGGGATCGCGGTCCCTGCGGCGCCAGCAACTGCAGGACGCCGCAGCTCGACGCCGAGGCGGTGGCGGGACCTCCGGGCCGCTCGCTCTT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
||
| CDS CCA 90 bp | CCGCAGCCACGTAGCCCCCGGGGTCTCGCGCGGCGCCGTTGGCCATaGGCGGGCTGGGCGAGTAGGGAAAGCGTGCAGAGGCGTGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PQPRSPRGLARRRWP*AGWASRESVQRRGP Trigger: CGGCCCACGCCTCTGCACGCTTTCCCTACTCGCCCAGCCCGCCCATGGCCAACGGCGCCGCGCGAGACCCCGGGGGCTACGTGGCTGCGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS CCA 90 bp | TGCCGCCCGCAGCCACGTAGCCCCCGGGGTCTCGCGCGGCGCCGTTaGCCATGGGCGGGCTGGGCGAGTAGGGAAAGCGTGCAGAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: CRPQPRSPRGLARRR*PWAGWASRESVQRR Trigger: ACGCCTCTGCACGCTTTCCCTACTCGCCCAGCCCGCCCATGGCCAACGGCGCCGCGCGAGACCCCGGGGGCTACGTGGCTGCGGGCGGCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS GCA 90 bp | CGCGGCGCCGTTGGCCATGGGCGGGCTGGGCGAGTAGGGAAAGCGTaGAGAGGCGTGGGCCGTAGCCGATCCCGCACCTCCAGGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGAVGHGRAGRVGKA*RGVGRSRSRTSRSG Trigger: GCCGGACCTGGAGGTGCGGGATCGGCTACGGCCCACGCCTCTGCACGCTTTCCCTACTCGCCCAGCCCGCCCATGGCCAACGGCGCCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS CCA 90 bp | GCACGAAGCCGCCGGGCGCGCCGTCGTAAGCGGCGGGCCCCTGGCTaGACAGGGCGGCGAGGGTCTGGTACATTTCCTCCGGCTGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARSRRARRRKRRAPG*TGRRGSGTFPPAAR Trigger: CCGAGCAGCCGGAGGAAATGTACCAGACCCTCGCCGCCCTGTCCAGCCAGGGGCCCGCCGCTTACGACGGCGCGCCCGGCGGCTTCGTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS GCA 90 bp | AGCCTGGGTGGGCACCCGCTCCGCCCGCGTGATTGCTGGGCCCGCTaGCCGCCCCTTGAAGGTAGGGCAGGCCGGACAGCATGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLGGHPLRPRDCWAR*PPLEGRAGRTAWSP Trigger: TGGGCTCCATGCTGTCCGGCCTGCCCTACCTTCAAGGGGCGGGCAGCGGGCCCAGCAATCACGCGGGCGGAGCGGGTGCCCACCCAGGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS CCA 90 bp | GGACGAAGACGAGATGGGGGAAAGCGGCGAGGAGGGCTCCCGCGCTaGAAAGGGCCCGGAGTCGCCGGCGTCCGCAGCAGCAGCCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRRRDGGKRRGGLPR*KGPGVAGVRSSSPE Trigger: TTCGGGGCTGCTGCTGCGGACGCCGGCGACTCCGGGCCCTTTCCAGCGCGGGAGCCCTCCTCGCCGCTTTCCCCCATCTCGTCTTCGTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047762.10 ENSMUST00000234512.2 ENSMUST00000235081.2 |
||
| CDS GCA 90 bp | CCCTGGCTGGACAGGGCGGCGAGGGTCTGGTACATTTCCTCCGGCTaGTCGGCCGCGAAGGGGCTCAGTTTGGCGCCCCGGCTGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: PWLDRAARVWYISSG*SAAKGLSLAPRLDH Trigger: GTGGTCCAGCCGGGGCGCCAAACTGAGCCCCTTCGCGGCCGAGCAGCCGGAGGAAATGTACCAGACCCTCGCCGCCCTGTCCAGCCAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
||
| CDS CCA 90 bp | CCTCCGGCTGCTCGGCCGCGAAGGGGCTCAGTTTGGCGCCCCGGCTaGACCACAACAGCTTGCTGGCGGTCGCGGCCTGATCGAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPAARPRRGSVWRPG*TTTACWRSRPDRGQ Trigger: CTGACCTCGATCAGGCCGCGACCGCCAGCAAGCTGTTGTGGTCCAGCCGGGGCGCCAAACTGAGCCCCTTCGCGGCCGAGCAGCCGGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
||
| CDS CCA 90 bp | CCCCGTGGCACCGGGAGTGGAGCTCCCGCGCGGCCCTGTAAGCTGTaGAGCACCGGCGTTTCGAAGGGTCCTGCTGGCCAGGCAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRGTGSGAPARPCKL*STGVSKGPAGQAGV Trigger: GACTCCTGCCTGGCCAGCAGGACCCTTCGAAACGCCGGTGCTCCACAGCTTACAGGGCCGCGCGGGAGCTCCACTCCCGGTGCCACGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS GCA 90 bp | TACGTTCCGTTCAGCGGCCGAGCTGCGGACAGCGAGCTGTACTGGTaGTCCCGGCCACCCATGGCCGCCAGGCTGCCGCCACCTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: YVPFSGRAADSELYW*SRPPMAARLPPPPL Trigger: GAGTGGAGGTGGCGGCAGCCTGGCGGCCATGGGTGGCCGGGAGCACCAGTACAGCTCGCTGTCCGCAGCTCGGCCGCTGAACGGAACGTA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS CCA 90 bp | TGGTACGTTCCGTTCAGCGGCCGAGCTGCGGACAGCGAGCTGTACTaGTGCTCCCGGCCACCCATGGCCGCCAGGCTGCCGCCACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WYVPFSGRAADSELY*CSRPPMAARLPPPP Trigger: TGGAGGTGGCGGCAGCCTGGCGGCCATGGGTGGCCGGGAGCACCAGTACAGCTCGCTGTCCGCAGCTCGGCCGCTGAACGGAACGTACCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS CCA 90 bp | TCTGGTACATTTCCTCCGGCTGCTCGGCCGCGAAGGGGCTCAGTTTaGCGCCCCGGCTGGACCACAACAGCTTGCTGGCGGTCGCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGTFPPAARPRRGSV*RPGWTTTACWRSRP Trigger: AGGCCGCGACCGCCAGCAAGCTGTTGTGGTCCAGCCGGGGCGCCAAACTGAGCCCCTTCGCGGCCGAGCAGCCGGAGGAAATGTACCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
||
| CDS GCA 90 bp | GTGATGGTGATGGTGGTGGTGGTACGTTCCGTTCAGCGGCCGAGCTaGGGACAGCGAGCTGTACTGGTGCTCCCGGCCACCCATGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VMVMVVVVRSVQRPS*GQRAVLVLPATHGR Trigger: GCGGCCATGGGTGGCCGGGAGCACCAGTACAGCTCGCTGTCCGCAGCTCGGCCGCTGAACGGAACGTACCACCACCACCATCACCATCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS TCA 90 bp | TGGACCACAACAGCTTGCTGGCGGTCGCGGCCTGATCGAGGTCAGTaGAGAGCAACAGGTCCTCCCAAGTCGACAGGGCGCTCCCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WTTTACWRSRPDRGQ*RATGPPKSTGRSRG Trigger: GCCCCGGGAGCGCCCTGTCGACTTGGGAGGACCTGTTGCTCTTCACTGACCTCGATCAGGCCGCGACCGCCAGCAAGCTGTTGTGGTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
||
| CDS TCA 90 bp | TTGGCGCCCCGGCTGGACCACAACAGCTTGCTGGCGGTCGCGGCCTaGTCGAGGTCAGTGAAGAGCAACAGGTCCTCCCAAGTCGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAPRLDHNSLLAVAA*SRSVKSNRSSQVDR Trigger: CCTGTCGACTTGGGAGGACCTGTTGCTCTTCACTGACCTCGATCAGGCCGCGACCGCCAGCAAGCTGTTGTGGTCCAGCCGGGGCGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
||
| CDS-3UTR CAA 90 bp | CTGGACAATATCAGACACAAGTGGTATGAGGCCTTCAGAGCCCTCCTTGCCTCTTGCGGCGTCCTGCAGTaGCTGGCGCCGCAGGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: LDNIRHKWYEAFRALLASCGVLQ*LAPQGP Trigger: CGGTCCCTGCGGCGCCAGCAACTGCAGGACGCCGCA...AGAGGCAAGGAGGGCTCTGAAGGCCTCATACCACTTGTGTCTGATATTGTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGTGTCTGTCATGATGCAATCTTGCAAATTAATATTCTTGTTGAGACCCGCGAAGGGGCTCAGTTaGGCGCCCCGGCTGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QSVSVMMQSCKLIFLLRPAKGLS*APRLDH Trigger: GTGGTCCAGCCGGGGCGCCAAACTGAGCCCCTTCGC...GGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACACTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CAA 90 bp | TGTGGGTTGGTCACGTGGTACAGGCGTCAAGAGTGTTACAGATACTTAGAATATACGCGCTTCTGTGGCTaGATGAGGGGCCTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CGLVTWYRRQECYRYLEYTRFCG*MRGLLR Trigger: CCTCAGCAGGCCCCTCATCAAGCCACAGAAGCGCGT...ATATTCTAAGTATCTGTAACACTCTTGACGCCTGTACCACGTGACCAACCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGTGTCTGTCATGATGCAATCTTGCAAATTAATATTCTTGTTGAGACCCCAGCCCCGAAACGCTTaGGCAGGCACCAGCCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QSVSVMMQSCKLIFLLRPQPRNA*AGTSRR Trigger: ACGGCGGCTGGTGCCTGCCAAAGCGTTTCGGGGCTG...GGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACACTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS TCA 90 bp | GGTGGTCGCTTGTGTAGAAGGAGAAGTATTTTTGGTGCAGTCATCTaGATTAGAAGAAGAGGAAGTAGGAGTCATAGGGACAGAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GGRLCRRRSIFGAVI*IRRRGSRSHRDRAT Trigger: AGTGGCTCTGTCCCTATGACTCCTACTTCCTCTTCTTCTAATTCAGATGACTGCACCAAAAATACTTCTCCTTCTACACAAGCGACCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGTGTCTGTCATGATGCAATCTTGCAAATTAATATTCTTGTTGAGACCCGAAGGAGAAGTATTTTaGGTGCAGTCATCTGAATTA | + |
|
Preference number: 5 (lower is better) Translates to: QSVSVMMQSCKLIFLLRPEGEVF*VQSSEL Trigger: TAATTCAGATGACTGCACCAAAAATACTTCTCCTTC...GGGTCTCAACAAGAATATTAATTTGCAAGATTGCATCATGACAGACACTGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
||
| CDS GCA 72 bp | CCACCGCCTCGGCGTCGAGCTGCGGCGTCCTGCAGTTaGTGGCGCCGCAGGGACCGCGATCCCCGCCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PPPRRRAAASCS*WRRRDRDPRPG Trigger: CCCGGGGCGGGGATCGCGGTCCCTGCGGCGCCAGCAACTGCAGGACGCCGCAGCTCGACGCCGAGGCGGTGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
||
| CDS GCA 72 bp | CGGCCCGGAGGTCCCGCCACCGCCTCGGCGTCGAGCTaGGGCGTCCTGCAGTTGCTGGCGCCGCAGGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: RPGGPATASASS*GVLQLLAPQGP Trigger: CGGTCCCTGCGGCGCCAGCAACTGCAGGACGCCGCAGCTCGACGCCGAGGCGGTGGCGGGACCTCCGGGCCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
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| CDS CAA 72 bp | GCCACCGCCTCGGCGTCGAGCTGCGGCGTCCTGCAGTaGCTGGCGCCGCAGGGACCGCGATCCCCGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: ATASASSCGVLQ*LAPQGPRSPPR Trigger: CCGGGGCGGGGATCGCGGTCCCTGCGGCGCCAGCAACTGCAGGACGCCGCAGCTCGACGCCGAGGCGGTGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
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| CDS GCA 72 bp | GTCCCGCCACCGCCTCGGCGTCGAGCTGCGGCGTCCTaGAGTTGCTGGCGCCGCAGGGACCGCGATCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: VPPPPRRRAAAS*SCWRRRDRDPR Trigger: GCGGGGATCGCGGTCCCTGCGGCGCCAGCAACTGCAGGACGCCGCAGCTCGACGCCGAGGCGGTGGCGGGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
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| CDS GCA 72 bp | CCATGGCCGCCAGGCTGCCGCCACCTCCACTCACACTaGCTGCGCCCGTGCCGCCCGCAGCCACGTAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: PWPPGCRHLHSH*LRPCRPQPRSP Trigger: GGGGCTACGTGGCTGCGGGCGGCACGGGCGCAGGCAGTGTGAGTGGAGGTGGCGGCAGCCTGGCGGCCATGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS CCA 72 bp | AGGGCAGGCCGGACAGCATGGAGCCCACGCGCGTGGTaGGCACGTAGACCGGGGAGCTGGCTGCCGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RAGRTAWSPRAW*ARRPGSWLPRR Trigger: CCGCCGCGGCAGCCAGCTCCCCGGTCTACGTGCCCACCACGCGCGTGGGCTCCATGCTGTCCGGCCTGCCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS TCA 72 bp | CGTGGGCAGCGGCGAAGGGATGCGAGGCGTAGGGGCTaGGCAAGAGCGAGCGGCCCGGAGGTCCCGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: RGQRRRDARRRG*ARASGPEVPPP Trigger: CGGTGGCGGGACCTCCGGGCCGCTCGCTCTTGCTCAGCCCCTACGCCTCGCATCCCTTCGCCGCTGCCCACG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
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| CDS GCA 72 bp | GGGCACCCGCTCCGCCCGCGTGATTGCTGGGCCCGCTaGCCGCCCCTTGAAGGTAGGGCAGGCCGGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: GHPLRPRDCWAR*PPLEGRAGRTA Trigger: TGCTGTCCGGCCTGCCCTACCTTCAAGGGGCGGGCAGCGGGCCCAGCAATCACGCGGGCGGAGCGGGTGCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS CCA 72 bp | CGAGATGGGGGAAAGCGGCGAGGAGGGCTCCCGCGCTaGAAAGGGCCCGGAGTCGCCGGCGTCCGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RDGGKRRGGLPR*KGPGVAGVRSS Trigger: GCTGCTGCGGACGCCGGCGACTCCGGGCCCTTTCCAGCGCGGGAGCCCTCCTCGCCGCTTTCCCCCATCTCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047762.10 ENSMUST00000234512.2 ENSMUST00000235081.2 |
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| CDS CCA 72 bp | GCGGCGGGCCCCTGGCTGGACAGGGCGGCGAGGGTCTaGTACATTTCCTCCGGCTGCTCGGCCGCGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: AAGPWLDRAARV*YISSGCSAAKG Trigger: CCCCTTCGCGGCCGAGCAGCCGGAGGAAATGTACCAGACCCTCGCCGCCCTGTCCAGCCAGGGGCCCGCCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
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| CDS CCA 72 bp | AGCCTGGGTGGGCACCCGCTCCGCCCGCGTGATTGCTaGGCCCGCTGCCCGCCCCTTGAAGGTAGGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SLGGHPLRPRDC*ARCPPLEGRAG Trigger: GCCTGCCCTACCTTCAAGGGGCGGGCAGCGGGCCCAGCAATCACGCGGGCGGAGCGGGTGCCCACCCAGGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS CCA 72 bp | CAGCCACGTAGCCCCCGGGGTCTCGCGCGGCGCCGTTaGCCATGGGCGGGCTGGGCGAGTAGGGAAAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: QPRSPRGLARRR*PWAGWASRESV Trigger: CACGCTTTCCCTACTCGCCCAGCCCGCCCATGGCCAACGGCGCCGCGCGAGACCCCGGGGGCTACGTGGCTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS CAA 90 bp | GGCACCCGCTCCGCCCGCGTGATTGCTGGGCCCGCTGCCCGCCCCTaGAAGGTAGGGCAGGCCGGACAGCATGGAGCCCACGCGCGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GTRSARVIAGPAARP*KVGQAGQHGAHARG Trigger: ACCACGCGCGTGGGCTCCATGCTGTCCGGCCTGCCCTACCTTCAAGGGGCGGGCAGCGGGCCCAGCAATCACGCGGGCGGAGCGGGTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS CCA 72 bp | CCGTTCAGCGGCCGAGCTGCGGACAGCGAGCTGTACTaGTGCTCCCGGCCACCCATGGCCGCCAGGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: PFSGRAADSELY*CSRPPMAARLP Trigger: CGGCAGCCTGGCGGCCATGGGTGGCCGGGAGCACCAGTACAGCTCGCTGTCCGCAGCTCGGCCGCTGAACGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS GCA 72 bp | TTCAGCGGCCGAGCTGCGGACAGCGAGCTGTACTGGTaGTCCCGGCCACCCATGGCCGCCAGGCTGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: FSGRAADSELYW*SRPPMAARLPP Trigger: TGGCGGCAGCCTGGCGGCCATGGGTGGCCGGGAGCACCAGTACAGCTCGCTGTCCGCAGCTCGGCCGCTGAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS GCA 72 bp | GACAGGGCGGCGAGGGTCTGGTACATTTCCTCCGGCTaGTCGGCCGCGAAGGGGCTCAGTTTGGCGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: DRAARVWYISSG*SAAKGLSLAPR Trigger: CCGGGGCGCCAAACTGAGCCCCTTCGCGGCCGAGCAGCCGGAGGAAATGTACCAGACCCTCGCCGCCCTGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
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| CDS GCA 72 bp | GTTGGCCATGGGCGGGCTGGGCGAGTAGGGAAAGCGTaGAGAGGCGTGGGCCGTAGCCGATCCCGCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: VGHGRAGRVGKA*RGVGRSRSRTS Trigger: GGAGGTGCGGGATCGGCTACGGCCCACGCCTCTGCACGCTTTCCCTACTCGCCCAGCCCGCCCATGGCCAAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS CCA 72 bp | GCTCGGCCGCGAAGGGGCTCAGTTTGGCGCCCCGGCTaGACCACAACAGCTTGCTGGCGGTCGCGGCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: ARPRRGSVWRPG*TTTACWRSRPD Trigger: ATCAGGCCGCGACCGCCAGCAAGCTGTTGTGGTCCAGCCGGGGCGCCAAACTGAGCCCCTTCGCGGCCGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
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| CDS CAA 90 bp | GTCTGGTACATTTCCTCCGGCTGCTCGGCCGCGAAGGGGCTCAGTTaGGCGCCCCGGCTGGACCACAACAGCTTGCTGGCGGTCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: VWYISSGCSAAKGLS*APRLDHNSLLAVAA Trigger: GGCCGCGACCGCCAGCAAGCTGTTGTGGTCCAGCCGGGGCGCCAAACTGAGCCCCTTCGCGGCCGAGCAGCCGGAGGAAATGTACCAGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
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| CDS CCA 72 bp | ACCGGGAGTGGAGCTCCCGCGCGGCCCTGTAAGCTGTaGAGCACCGGCGTTTCGAAGGGTCCTGCTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TGSGAPARPCKL*STGVSKGPAGQ Trigger: CTGGCCAGCAGGACCCTTCGAAACGCCGGTGCTCCACAGCTTACAGGGCCGCGCGGGAGCTCCACTCCCGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS GCA 72 bp | ATGGTGGTGGTGGTACGTTCCGTTCAGCGGCCGAGCTaGGGACAGCGAGCTGTACTGGTGCTCCCGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: MVVVVRSVQRPS*GQRAVLVLPAT Trigger: GGTGGCCGGGAGCACCAGTACAGCTCGCTGTCCGCAGCTCGGCCGCTGAACGGAACGTACCACCACCACCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS TCA 72 bp | CGGCTGGACCACAACAGCTTGCTGGCGGTCGCGGCCTaGTCGAGGTCAGTGAAGAGCAACAGGTCCTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: RLDHNSLLAVAA*SRSVKSNRSSQ Trigger: TTGGGAGGACCTGTTGCTCTTCACTGACCTCGATCAGGCCGCGACCGCCAGCAAGCTGTTGTGGTCCAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047762.10 ENSMUST00000235081.2 |
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| CDS TCA 72 bp | GGACAGACTGACACCTATGTAGAGGCCGTCTTGACCTaGATACTTGAGGTCACTGTTCTCGGGGTTGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: GQTDTYVEAVLT*ILEVTVLGVGV Trigger: AACGCCAACCCCGAGAACAGTGACCTCAAGTATTCAGGTCAAGACGGCCTCTACATAGGTGTCAGTCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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| CDS CAA 72 bp | CCTGAGGTGGTCGCTTGTGTAGAAGGAGAAGTATTTTaGGTGCAGTCATCTGAATTAGAAGAAGAGGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: PEVVACVEGEVF*VQSSELEEEEV Trigger: TACTTCCTCTTCTTCTAATTCAGATGACTGCACCAAAAATACTTCTCCTTCTACACAAGCGACCACCTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047762.10 |
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