Pregenerated sensors for GATA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015619Ensembl transcript IDs: ENSMUST00000102976.4, ENSMUST00000130615.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCACAGAGCATGTAGGCCTAGCCATGACATTCTCAGATCTTCAGTaGGTGAGATCACACACCCATTGCCCAGATCTGAAATCTCTTTTG | + |
|
Preference number: 1 (lower is better) Translates to: FTEHVGLAMTFSDLQ*VRSHTHCPDLKSLL Trigger: CAAAAGAGATTTCAGATCTGGGCAATGGGTGTGTGATCTCACCCACTGAAGATCTGAGAATGTCATGGCTAGGCCTACATGCTCTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR CCA 90 bp | TTCACAGCACTAGAGACCCTGTTAAATAGGGAATATGAGTCTGAATaGCTTATTCACAAATGGGATCCGGATTCAGTGGTTGGAATGCAG | + |
|
Preference number: 1 (lower is better) Translates to: FTALETLLNREYESE*LIHKWDPDSVVGMQ Trigger: CTGCATTCCAACCACTGAATCCGGATCCCATTTGTGAATAAGCCATTCAGACTCATATTCCCTATTTAACAGGGTCTCTAGTGCTGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR CCA 90 bp | TGCATCAAACAACTGAAGGGAAACAAAACTGACAGTGTGCCCATTTaGACATCAGACTTAGTGGTTTCTTCTGTATCTCCATACTTTAAT | + |
|
Preference number: 1 (lower is better) Translates to: CIKQLKGNKTDSVPI*TSDLVVSSVSPYFN Trigger: ATTAAAGTATGGAGATACAGAAGAAACCACTAAGTCTGATGTCCAAATGGGCACACTGTCAGTTTTGTTTCCCTTCAGTTGTTTGATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR-3UTR GCA 90 bp | ACACAGGGGCTAACAGTCAGCCAGGTGGCTCTCAGGACCAGGCCTGTGAGTGGCATTCAGTGGTTGGAATaGAGACACCACCTCGAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: TQGLTVSQVALRTRPVSGIQWLE*RHHLEL Trigger: GAGCTCGAGGTGGTGTCTGCATTCCAACCACTGAAT...GCCACTCACAGGCCTGGTCCTGAGAGCCACCTGGCTGACTGTTAGCCCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR-3UTR TCA 90 bp | AATACAGAACACACAGGGGCTAACAGTCAGCCAGGTGGCTCTCAGGACCAGGCCCACCTCGAGCTCCTTTaGAAAAAGAAGCAAACATTT | + |
|
Preference number: 2 (lower is better) Translates to: NTEHTGANSQPGGSQDQAHLELL*KKKQTF Trigger: AAATGTTTGCTTCTTTTTTCAAAGGAGCTCGAGGTG...GGCCTGGTCCTGAGAGCCACCTGGCTGACTGTTAGCCCCTGTGTGTTCTGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR-3UTR TCA 90 bp | GCTGCAAGAAAAGTGACGAAAAAGACAGGTACCGCCGGGCCCATAGAAGCTATTGAAGGGAAACAAAACTaGCAGTGTGCCCATTTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: AARKVTKKTGTAGPIEAIEGKQN*QCAHLD Trigger: GTCCAAATGGGCACACTGTCAGTTTTGTTTCCCTTC...AATAGCTTCTATGGGCCCGGCGGTACCTGTCTTTTTCGTCACTTTTCTTGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR-3UTR GCA 90 bp | AATACAGAACACACAGGGGCTAACAGTCAGCCAGGTGGCTCTCAGGACCAGGCCCTTCATAGTTTAGGCTaGAAGAAAAGTGACGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: NTEHTGANSQPGGSQDQALHSLG*KKSDEK Trigger: TTTTTCGTCACTTTTCTTGCAGCCTAAACTATGAAG...GGCCTGGTCCTGAGAGCCACCTGGCTGACTGTTAGCCCCTGTGTGTTCTGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR-3UTR CCA 90 bp | ATATTCCTTAAAACTCTTGGCGTCCTTCATGCCTTTCTTACAGCTATCCAGGTATCCGGATTCAGTGGTTaGAATGCAGACACCACCTCG | + |
|
Preference number: 2 (lower is better) Translates to: IFLKTLGVLHAFLTAIQVSGFSG*NADTTS Trigger: CGAGGTGGTGTCTGCATTCCAACCACTGAATCCGGA...TACCTGGATAGCTGTAAGAAAGGCATGAAGGACGCCAAGAGTTTTAAGGAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAGGCAGTGATCACTAATACAGAACACACAGGGGCTAACAGTCAGCCAGGTTGGCTTATTCACAAATaGGATCCGGATTCAGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LKAVITNTEHTGANSQPGWLIHK*DPDSVV Trigger: AACCACTGAATCCGGATCCCATTTGTGAATAAGCCA...ACCTGGCTGACTGTTAGCCCCTGTGTGTTCTGTATTAGTGATCACTGCCTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTTCTTCTGTATCTCCATACTTTAATCCCCCTATATTCCTTAAAACTCTTGCGCTTTCGGGCTTCATaGTACTGCTCCTGCGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: WFLLYLHTLIPLYSLKLLRFRAS*YCSCEK Trigger: TTTTTCGCAGGAGCAGTATCATGAAGCCCGAAAGCG...CAAGAGTTTTAAGGAATATAGGGGGATTAAAGTATGGAGATACAGAAGAAACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR CAA 90 bp | CTTCTGTATCTCCATACTTTAATCCCCCTATATTCCTTAAAACTCTaGGCGTCCTTCATGCCTTTCTTACAGCTATCCAGGTACAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLYLHTLIPLYSLKL*ASFMPFLQLSRYNK Trigger: TTTATTGTACCTGGATAGCTGTAAGAAAGGCATGAAGGACGCCAAGAGTTTTAAGGAATATAGGGGGATTAAAGTATGGAGATACAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR-3UTR CCA 90 bp | GACAGGTACCGCCGGGCCCATAGAAGCTATTTAATAAATACCATCAAAAATAATGAATATGAGTCTGAATaGCTTATTCACAAATGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: DRYRRAHRSYLINTIKNNEYESE*LIHKWD Trigger: ATCCCATTTGTGAATAAGCCATTCAGACTCATATTC...ATTATTTTTGATGGTATTTATTAAATAGCTTCTATGGGCCCGGCGGTACCTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR CCA 72 bp | GCAAGTAGAAGGGGTCGGAGGAACTCTTCGCACACTTaGAGACTCCTCACGCATGTGGAGCAGGGCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ASRRGRRNSSHT*RLLTHVEQGSA Trigger: GGCAGAGCCCTGCTCCACATGCGTGAGGAGTCTCCAAGTGTGCGAAGAGTTCCTCCGACCCCTTCTACTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR-3UTR CAA 90 bp | AATACAGAACACACAGGGGCTAACAGTCAGCCAGGTGGCTCTCAGGACCAGGCCATCCGGATTCAGTGGTaGGAATGCAGACACCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: NTEHTGANSQPGGSQDQAIRIQW*ECRHHL Trigger: GAGGTGGTGTCTGCATTCCAACCACTGAATCCGGAT...GGCCTGGTCCTGAGAGCCACCTGGCTGACTGTTAGCCCCTGTGTGTTCTGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCAAGAAAAGTGACGAAAAAGACAGGTACCGCCGGGCCCATAGAAGCTATTGAGATCACACACCCATaGCCCAGATCTGAAATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AARKVTKKTGTAGPIEAIEITHP*PRSEIS Trigger: AGAGATTTCAGATCTGGGCAATGGGTGTGTGATCTC...AATAGCTTCTATGGGCCCGGCGGTACCTGTCTTTTTCGTCACTTTTCTTGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR CCA 72 bp | CATGTAGGCCTAGCCATGACATTCTCAGATCTTCAGTaGGTGAGATCACACACCCATTGCCCAGATCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HVGLAMTFSDLQ*VRSHTHCPDLK Trigger: TTTCAGATCTGGGCAATGGGTGTGTGATCTCACCCACTGAAGATCTGAGAATGTCATGGCTAGGCCTACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR GCA 72 bp | TTCTCAGATCTTCAGTGGGTGAGATCACACACCCATTaGCCAGATCTGAAATCTCTTTTGCACAGGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FSDLQWVRSHTH*PDLKSLLHRLT Trigger: TGTGAGCCTGTGCAAAAGAGATTTCAGATCTGGGCAATGGGTGTGTGATCTCACCCACTGAAGATCTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR CCA 72 bp | ATGGCTTATTCACAAATGGGATCCGGATTCAGTGGTTaGAATGCAGACACCACCTCGAGCTCCTTTGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: MAYSQMGSGFSG*NADTTSSSFEK Trigger: TTTTTCAAAGGAGCTCGAGGTGGTGTCTGCATTCCAACCACTGAATCCGGATCCCATTTGTGAATAAGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR CCA 72 bp | CAACTGAAGGGAAACAAAACTGACAGTGTGCCCATTTaGACATCAGACTTAGTGGTTTCTTCTGTATCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QLKGNKTDSVPI*TSDLVVSSVSP Trigger: TGGAGATACAGAAGAAACCACTAAGTCTGATGTCCAAATGGGCACACTGTCAGTTTTGTTTCCCTTCAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR CCA 72 bp | CTAGAGACCCTGTTAAATAGGGAATATGAGTCTGAATaGCTTATTCACAAATGGGATCCGGATTCAGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LETLLNREYESE*LIHKWDPDSVV Trigger: AACCACTGAATCCGGATCCCATTTGTGAATAAGCCATTCAGACTCATATTCCCTATTTAACAGGGTCTCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR TCA 90 bp | ACACAGGGGCTAACAGTCAGCCAGGTGGCTCTCAGGACCAGGCCTGTGAGTGGCAGAGAGCGGCCGGGTTaGAGGAGCTGCTCTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQGLTVSQVALRTRPVSGRERPG*RSCSWG Trigger: TCCCCAAGAGCAGCTCCTTCAACCCGGCCGCTCTCT...GCCACTCACAGGCCTGGTCCTGAGAGCCACCTGGCTGACTGTTAGCCCCTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR TCA 90 bp | AATACAGAACACACAGGGGCTAACAGTCAGCCAGGTGGCTCTCAGGACCAGGCCATGCTGGAAGGGTGGTaGGGTCCGAAGGAGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NTEHTGANSQPGGSQDQAMLEGW*GPKERP Trigger: CGGCCTCTCCTTCGGACCTCACCACCCTTCCAGCAT...GGCCTGGTCCTGAGAGCCACCTGGCTGACTGTTAGCCCCTGTGTGTTCTGTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | AATACAGAACACACAGGGGCTAACAGTCAGCCAGGTGGCTCTCAGGACCAGGCCCCCGGAGAGCCGTGGTaGATGGACGTCTTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NTEHTGANSQPGGSQDQAPGEPW*MDVLEK Trigger: CTTCTCCAAGACGTCCATCCACCACGGCTCTCCGGG...GGCCTGGTCCTGAGAGCCACCTGGCTGACTGTTAGCCCCTGTGTGTTCTGTATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR TCA 90 bp | ACACAGGGGCTAACAGTCAGCCAGGTGGCTCTCAGGACCAGGCCTGTGAGTGGCGCTGCACCTGATACTTaGGGCACTCTTTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQGLTVSQVALRTRPVSGAAPDT*GTLSHL Trigger: AAGATGAGAAAGAGTGCCTCAAGTATCAGGTGCAGC...GCCACTCACAGGCCTGGTCCTGAGAGCCACCTGGCTGACTGTTAGCCCCTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | GCTGCAAGAAAAGTGACGAAAAAGACAGGTACCGCCGGGCCCATAGAAGCTATTGGCTGCTCAGGGCTTTaGCGCCATCCAGCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AARKVTKKTGTAGPIEAIGCSGL*RHPARA Trigger: TGCCCTGGCTGGATGGCGGCAAAGCCCTGAGCAGCC...AATAGCTTCTATGGGCCCGGCGGTACCTGTCTTTTTCGTCACTTTTCTTGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGTGGGTGAGATCACACACCCATTGCCCAGATCTGAAATCTCTTTTGCATTGAGGACCGCGGGGTaGTGGTGGCTCACCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVGEITHPLPRSEISFALRTAG*WWLTQR Trigger: GCGCTGGGTGAGCCACCATCACCCCGCGGTCCTCAA...TGCAAAAGAGATTTCAGATCTGGGCAATGGGTGTGTGATCTCACCCACTGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTGCCTTCAAAAACACAGATCTGTCGCTTTCGGGCTTCATGATACTGCTAGGCGGTGTGGTGGCTaGTCAGGGCTTTGCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFCLQKHRSVAFGLHDTARRCGG*SGLCRH Trigger: ATGGCGGCAAAGCCCTGAGCAGCCACCACACCGCCT...AGCAGTATCATGAAGCCCGAAAGCGACAGATCTGTGTTTTTGAAGGCAGAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGTGGGTGAGATCACACACCCATTGCCCAGATCTGAAATCTCTTTTGCAGCTTCCATGTACGAATaGCCGAGGCCCGGGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVGEITHPLPRSEISFAASMYE*PRPGWC Trigger: GCACCACCCGGGCCTCGGCCATTCGTACATGGAAGC...TGCAAAAGAGATTTCAGATCTGGGCAATGGGTGTGTGATCTCACCCACTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | AATATGAGTCTGAATGGCTTATTCACAAATGGGATCCGGATTCAGTGGTTGGAAAGGCCGGAGGGCGGATaGATGGGCGTCGGTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NMSLNGLFTNGIRIQWLERPEGG*MGVGVV Trigger: GACCACACCGACGCCCATGCATCCGCCCTCCGGCCT...TTCCAACCACTGAATCCGGATCCCATTTGTGAATAAGCCATTCAGACTCATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGTGGGTGAGATCACACACCCATTGCCCAGATCTGAAATCTCTTTTGCAGAGAGCCGTGGTGGATaGACGTCTTGGAGAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVGEITHPLPRSEISFAESRGG*TSWRRG Trigger: GCCCCTTCTCCAAGACGTCCATCCACCACGGCTCTC...TGCAAAAGAGATTTCAGATCTGGGCAATGGGTGTGTGATCTCACCCACTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | CTCTTGGCGTCCTTCATGCCTTTCTTACAGCTATCCAGGTACAATAAAGTCTTCAGGCCCCACCCAGGGTaGTCATGCTGCCTCGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLASFMPFLQLSRYNKVFRPHPG*SCCLES Trigger: ACTCTCGAGGCAGCATGACCACCCTGGGTGGGGCCT...GAAGACTTTATTGTACCTGGATAGCTGTAAGAAAGGCATGAAGGACGCCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR TCA 90 bp | AATATGAGTCTGAATGGCTTATTCACAAATGGGATCCGGATTCAGTGGTTGGAATCTTGGAGAAGGGGCTaGGGTTCCAGGGCGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NMSLNGLFTNGIRIQWLESWRRG*GSRARR Trigger: CCGCCTCGCCCTGGAACCTCAGCCCCTTCTCCAAGA...TTCCAACCACTGAATCCGGATCCCATTTGTGAATAAGCCATTCAGACTCATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | AACAAAACTGACAGTGTGCCCATTTGGACATCAGACTTAGTGGTTTCTTCTGTACAGGGCAGAGATCCGTaGAGCAGAGGCGGGCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKTDSVPIWTSDLVVSSVQGRDP*SRGGRH Trigger: ATGCCGCCCGCCTCTGCTGCACGGATCTCTGCCCTG...TACAGAAGAAACCACTAAGTCTGATGTCCAAATGGGCACACTGTCAGTTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGCAGTGATCACTAATACAGAACACACAGGGGCTAACAGTCAGCCAGGTCAGTGGGGTAGAGGTTaGCCCGCAGTTCACACACTC | + |
|
Preference number: 4 (lower is better) Translates to: LKAVITNTEHTGANSQPGQWGRG*PAVHTL Trigger: GAGTGTGTGAACTGCGGGGCAACCTCTACCCCACTG...ACCTGGCTGACTGTTAGCCCCTGTGTGTTCTGTATTAGTGATCACTGCCTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | AACAAAACTGACAGTGTGCCCATTTGGACATCAGACTTAGTGGTTTCTTCTGTACAGGGCGAGGCGGTGTaGTGGCTGCTCAGGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTDSVPIWTSDLVVSSVQGEAV*WLLRAL Trigger: CAAAGCCCTGAGCAGCCACCACACCGCCTCGCCCTG...TACAGAAGAAACCACTAAGTCTGATGTCCAAATGGGCACACTGTCAGTTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGTGGGTGAGATCACACACCCATTGCCCAGATCTGAAATCTCTTTTGCAGATGTGGCTCAGGGATaGCATGTGTCTGGAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVGEITHPLPRSEISFADVAQG*HVSGES Trigger: GCTCTCTCCAGACACATGTCATCCCTGAGCCACATC...TGCAAAAGAGATTTCAGATCTGGGCAATGGGTGTGTGATCTCACCCACTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | AACAAAACTGACAGTGTGCCCATTTGGACATCAGACTTAGTGGTTTCTTCTGTACGGGTGGTGCGTGTCTaGGTGCTGACCGTTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NKTDSVPIWTSDLVVSSVRVVRV*VLTVED Trigger: GTCCTCAACGGTCAGCACCCAGACACGCACCACCCG...TACAGAAGAAACCACTAAGTCTGATGTCCAAATGGGCACACTGTCAGTTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | AATATGAGTCTGAATGGCTTATTCACAAATGGGATCCGGATTCAGTGGTTGGAACCCTGCCTTCTGTGCTaGATCGTGCCTTGGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NMSLNGLFTNGIRIQWLEPCLLC*IVPWAS Trigger: CGAGGCCCAAGGCACGATCCAGCACAGAAGGCAGGG...TTCCAACCACTGAATCCGGATCCCATTTGTGAATAAGCCATTCAGACTCATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGCAGTGATCACTAATACAGAACACACAGGGGCTAACAGTCAGCCAGGTTTCTGTGCTGGATCGTaGCTTGGGCCTCGACTTACA | + |
|
Preference number: 4 (lower is better) Translates to: LKAVITNTEHTGANSQPGFCAGS*LGPRLT Trigger: TGTAAGTCGAGGCCCAAGGCACGATCCAGCACAGAA...ACCTGGCTGACTGTTAGCCCCTGTGTGTTCTGTATTAGTGATCACTGCCTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGCAGTGATCACTAATACAGAACACACAGGGGCTAACAGTCAGCCAGGTAGTTCACACACTCCCTaGCTTCTGTGCTGGATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKAVITNTEHTGANSQPGSSHTP*LLCWIV Trigger: CACGATCCAGCACAGAAGGCAGGGAGTGTGTGAACT...ACCTGGCTGACTGTTAGCCCCTGTGTGTTCTGTATTAGTGATCACTGCCTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | ATATTCCTTAAAACTCTTGGCGTCCTTCATGCCTTTCTTACAGCTATCCAGGTACATACCTGGCTCCCGTaGTGGGTCGGAGGATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFLKTLGVLHAFLTAIQVHTWLP*WVGGYL Trigger: GAGGTATCCTCCGACCCACCACGGGAGCCAGGTATG...TACCTGGATAGCTGTAAGAAAGGCATGAAGGACGCCAAGAGTTTTAAGGAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | GCTGCAAGAAAAGTGACGAAAAAGACAGGTACCGCCGGGCCCATAGAAGCTATTCAGCTTCATGCTATCTaGCAGCTGCACCTGATACTT | + |
|
Preference number: 4 (lower is better) Translates to: AARKVTKKTGTAGPIEAIQLHAI*QLHLIL Trigger: AAGTATCAGGTGCAGCTGCCAGATAGCATGAAGCTG...AATAGCTTCTATGGGCCCGGCGGTACCTGTCTTTTTCGTCACTTTTCTTGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | ATATTCCTTAAAACTCTTGGCGTCCTTCATGCCTTTCTTACAGCTATCCAGGTAGTGGTAATGGGGTGGTaGGCTGAGGATGAGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLKTLGVLHAFLTAIQVVVMGW*AEDEAP Trigger: TGGGGCCTCATCCTCAGCCCACCACCCCATTACCAC...TACCTGGATAGCTGTAAGAAAGGCATGAAGGACGCCAAGAGTTTTAAGGAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | GACAGGTACCGCCGGGCCCATAGAAGCTATTTAATAAATACCATCAAAAATAATATCTCGCCGCCACAGTaGGGTAGAGGTTGCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: DRYRRAHRSYLINTIKNNISPPQ*GRGCPA Trigger: TGCGGGGCAACCTCTACCCCACTGTGGCGGCGAGAT...ATTATTTTTGATGGTATTTATTAAATAGCTTCTATGGGCCCGGCGGTACCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | ATATTCCTTAAAACTCTTGGCGTCCTTCATGCCTTTCTTACAGCTATCCAGGTATCCAGAGGGTGGTGGTaGTGGTCTGACAGTTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IFLKTLGVLHAFLTAIQVSRGWW*WSDSSR Trigger: GCGCGAACTGTCAGACCACCACCACCACCCTCTGGA...TACCTGGATAGCTGTAAGAAAGGCATGAAGGACGCCAAGAGTTTTAAGGAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | CTCTTGGCGTCCTTCATGCCTTTCTTACAGCTATCCAGGTACAATAAAGTCTTCACGTCTCCAGCTTCATaGTATCTGGCAGCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LLASFMPFLQLSRYNKVFTSPAS*YLAAAP Trigger: AGGTGCAGCTGCCAGATAGCATGAAGCTGGAGACGT...GAAGACTTTATTGTACCTGGATAGCTGTAAGAAAGGCATGAAGGACGCCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCTTCTGTATCTCCATACTTTAATCCCCCTATATTCCTTAAAACTCTTGGGCCCCGGAGAGCCGTaGTGGATGGACGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WFLLYLHTLIPLYSLKLLGPGEP*WMDVLE Trigger: CTCCAAGACGTCCATCCACCACGGCTCTCCGGGGCC...CAAGAGTTTTAAGGAATATAGGGGGATTAAAGTATGGAGATACAGAAGAAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR TCA 90 bp | GCTTTCTGCCTTCAAAAACACAGATCTGTCGCTTTCGGGCTTCATGATACTGCTGGGACGTGGTTGCCTTaGCCATCGATGTTAAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AFCLQKHRSVAFGLHDTAGTWLP*PSMLKS Trigger: ACTTTTTAACATCGATGGTCAAGGCAACCACGTCCC...AGCAGTATCATGAAGCCCGAAAGCGACAGATCTGTGTTTTTGAAGGCAGAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR TCA 90 bp | AACAAAACTGACAGTGTGCCCATTTGGACATCAGACTTAGTGGTTTCTTCTGTATCTGGCAGCTGCACCTaGTACTTGAGGCACTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKTDSVPIWTSDLVVSSVSGSCT*YLRHSF Trigger: GAAAGAGTGCCTCAAGTATCAGGTGCAGCTGCCAGA...TACAGAAGAAACCACTAAGTCTGATGTCCAAATGGGCACACTGTCAGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR TCA 90 bp | GTGGTTTCTTCTGTATCTCCATACTTTAATCCCCCTATATTCCTTAAAACTCTTGTGGTGGTGGTGGTCTaGCAGTTCGCGCAGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVSSVSPYFNPPIFLKTLVVVVV*QFAQDV Trigger: GACATCCTGCGCGAACTGTCAGACCACCACCACCAC...AAGAGTTTTAAGGAATATAGGGGGATTAAAGTATGGAGATACAGAAGAAACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTTCTTACAGCTATCCAGGTACAATAAAGTCTTCCTCAAATGTACAGTACACTCTTTCTCATCTTaGCTGGCCGACCCGGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MPFLQLSRYNKVFLKCTVHSFSS*LADPAD Trigger: ATCCGCCGGGTCGGCCAGGCAAGATGAGAAAGAGTG...TACTGTACATTTGAGGAAGACTTTATTGTACCTGGATAGCTGTAAGAAAGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTTCTTACAGCTATCCAGGTACAATAAAGTCTTCCTCAAATGTACAGTAATGCTGCCTCGAGAGTaGGACGTCTCCAGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: MPFLQLSRYNKVFLKCTVMLPRE*DVSSFM Trigger: CATGAAGCTGGAGACGTCTCACTCTCGAGGCAGCAT...TACTGTACATTTGAGGAAGACTTTATTGTACCTGGATAGCTGTAAGAAAGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTTCTTACAGCTATCCAGGTACAATAAAGTCTTCCTCAAATGTACAGTAAGAGTCCGCAGGCATTaGAAAGGTAGTGCCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MPFLQLSRYNKVFLKCTVRVRRH*KGSARY Trigger: GTACCGGGCACTACCTTTGCAATGCCTGCGGACTCT...TACTGTACATTTGAGGAAGACTTTATTGTACCTGGATAGCTGTAAGAAAGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| 3UTR CAA 72 bp | CTCCATACTTTAATCCCCCTATATTCCTTAAAACTCTaGGCGTCCTTCATGCCTTTCTTACAGCTATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHTLIPLYSLKL*ASFMPFLQLSR Trigger: CCTGGATAGCTGTAAGAAAGGCATGAAGGACGCCAAGAGTTTTAAGGAATATAGGGGGATTAAAGTATGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR GCA 90 bp | GACAGGTACCGCCGGGCCCATAGAAGCTATTTAATAAATACCATCAAAAATAATTCCTCCAGCGCGTCATaGACCTTTTTGCACTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRYRRAHRSYLINTIKNNSSSAS*TFLHFF Trigger: GAAAAAGTGCAAAAAGGTGCATGACGCGCTGGAGGA...ATTATTTTTGATGGTATTTATTAAATAGCTTCTATGGGCCCGGCGGTACCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CCA 90 bp | TTGCCTGGCCGACCCGGCGGATCCCGGGGTGGACAGCGACGGGTCTaGGGAGACGTCTTTCGGCGGGGTGGGCGGGAAGGTGAAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRPGGSRGGQRRV*GDVFRRGGREGEEM Trigger: CATCTCTTCACCTTCCCGCCCACCCCGCCGAAAGACGTCTCCCCAGACCCGTCGCTGTCCACCCCGGGATCCGCCGGGTCGGCCAGGCAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS GCA 90 bp | TGGCTGCTCAGGGCTTTGCCGCCATCCAGCCAGGGCAGAGATCCGTaGAGCAGAGGCGGGCGGCATACCTGGCTCCCGTGGTGGGTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: WLLRALPPSSQGRDP*SRGGRHTWLPWWVG Trigger: TCCGACCCACCACGGGAGCCAGGTATGCCGCCCGCCTCTGCTGCACGGATCTCTGCCCTGGCTGGATGGCGGCAAAGCCCTGAGCAGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102976.4 ENSMUST00000130615.2 |
||
| CDS TCA 90 bp | GAGGCCCCGGAGAGCCGTGGTGGATGGACGTCTTGGAGAAGGGGCTaGGGTTCCAGGGCGAGGCGGTGTGGTGGCTGCTCAGGGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EAPESRGGWTSWRRG*GSRARRCGGCSGLC Trigger: GCAAAGCCCTGAGCAGCCACCACACCGCCTCGCCCTGGAACCTCAGCCCCTTCTCCAAGACGTCCATCCACCACGGCTCTCCGGGGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102976.4 ENSMUST00000130615.2 |
||
| CDS TCA 90 bp | GCGACGGGTCTGGGGAGACGTCTTTCGGCGGGGTGGGCGGGAAGGTaGAGAGATGAGGACTGGAGTGGCCGGCCGCCAGAGAAGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ATGLGRRLSAGWAGR*RDEDWSGRPPEKRM Trigger: CATCCTCTTCTCTGGCGGCCGGCCACTCCAGTCCTCATCTCTTCACCTTCCCGCCCACCCCGCCGAAAGACGTCTCCCCAGACCCGTCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS TCA 90 bp | TCTGGGGAGACGTCTTTCGGCGGGGTGGGCGGGAAGGTGAAGAGATaGGGACTGGAGTGGCCGGCCGCCAGAGAAGAGGATGAAGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGETSFGGVGGKVKR*GLEWPAAREEDEAG Trigger: TCCGGCTTCATCCTCTTCTCTGGCGGCCGGCCACTCCAGTCCTCATCTCTTCACCTTCCCGCCCACCCCGCCGAAAGACGTCTCCCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS GCA 90 bp | TGGGGTGGTGGGCTGAGGATGAGGCCCCACCCAGGGTGGTCATGCTaGCTCGAGAGTGAGACGTCTCCAGCTTCATGCTATCTGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WGGGLRMRPHPGWSC*LESETSPASCYLAA Trigger: AGCTGCCAGATAGCATGAAGCTGGAGACGTCTCACTCTCGAGGCAGCATGACCACCCTGGGTGGGGCCTCATCCTCAGCCCACCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CAA 90 bp | ACACAGGGGCTAACAGTCAGCCAGGTGGCTCTCAGGACCAGGCCTGTGAGTGGCTTGAAGGAGCTGCTCTaGGGGAAGTCCTCCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: TQGLTVSQVALRTRPVSGLKELL*GKSSSA Trigger: CGCGCTGGAGGACTTCCCCAAGAGCAGCTCCTTCAA...GCCACTCACAGGCCTGGTCCTGAGAGCCACCTGGCTGACTGTTAGCCCCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CAA 90 bp | ACACAGGGGCTAACAGTCAGCCAGGTGGCTCTCAGGACCAGGCCTGTGAGTGGCTACAGCCCACAGGCATaGCAGACCGGGTCCCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: TQGLTVSQVALRTRPVSGYSPQA*QTGSPL Trigger: TAATGGGGACCCGGTCTGCAATGCCTGTGGGCTGTA...GCCACTCACAGGCCTGGTCCTGAGAGCCACCTGGCTGACTGTTAGCCCCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS TCA 90 bp | AGATGTGGCTCAGGGATGACATGTGTCTGGAGAGAGCGGCCGGGTTaGAGGAGCTGCTCTTGGGGAAGTCCTCCAGCGCGTCATGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: RCGSGMTCVWRERPG*RSCSWGSPPARHAP Trigger: AGGTGCATGACGCGCTGGAGGACTTCCCCAAGAGCAGCTCCTTCAACCCGGCCGCTCTCTCCAGACACATGTCATCCCTGAGCCACATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS TCA 90 bp | GAGACGTCTCCAGCTTCATGCTATCTGGCAGCTGCACCTGATACTTaGGGCACTCTTTCTCATCTTGCCTGGCCGACCCGGCGGATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ETSPASCYLAAAPDT*GTLSHLAWPTRRIP Trigger: CGGGATCCGCCGGGTCGGCCAGGCAAGATGAGAAAGAGTGCCTCAAGTATCAGGTGCAGCTGCCAGATAGCATGAAGCTGGAGACGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS TCA 90 bp | CCATCGATGTTAAAAAGTACGTCCACCTCTTCCGTCAGCGGATACTaGGCTTCCATGTACGAATGGCCGAGGCCCGGGTGGTGCGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSMLKSTSTSSVSGY*ASMYEWPRPGWCVS Trigger: AGACACGCACCACCCGGGCCTCGGCCATTCGTACATGGAAGCTCAGTATCCGCTGACGGAAGAGGTGGACGTACTTTTTAACATCGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CCA 90 bp | GGTCATGCTGCCTCGAGAGTGAGACGTCTCCAGCTTCATGCTATCTaGCAGCTGCACCTGATACTTGAGGCACTCTTTCTCATCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GHAASRVRRLQLHAI*QLHLILEALFLILP Trigger: AGGCAAGATGAGAAAGAGTGCCTCAAGTATCAGGTGCAGCTGCCAGATAGCATGAAGCTGGAGACGTCTCACTCTCGAGGCAGCATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CAA 90 bp | CTCTTGGCGTCCTTCATGCCTTTCTTACAGCTATCCAGGTACAATAAAGTCTTCGCCGACAGCCTTCGCTaGGGCTTGATAAGGGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLASFMPFLQLSRYNKVFADSLR*GLIRGR Trigger: CCGGCCCCTTATCAAGCCCAAGCGAAGGCTGTCGGC...GAAGACTTTATTGTACCTGGATAGCTGTAAGAAAGGCATGAAGGACGCCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CAA 90 bp | CTCTTGGCGTCCTTCATGCCTTTCTTACAGCTATCCAGGTACAATAAAGTCTTCGAGAGAGCGGCCGGGTaGAAGGAGCTGCTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLASFMPFLQLSRYNKVFERAAG*KELLLG Trigger: CCCCAAGAGCAGCTCCTTCAACCCGGCCGCTCTCTC...GAAGACTTTATTGTACCTGGATAGCTGTAAGAAAGGCATGAAGGACGCCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CAA 90 bp | GCTTTCTGCCTTCAAAAACACAGATCTGTCGCTTTCGGGCTTCATGATACTGCTATGTCCCTGCTCTCCTaGCTGCCGACAGCCTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AFCLQKHRSVAFGLHDTAMSLLS*LPTAFA Trigger: AGCGAAGGCTGTCGGCAGCAAGGAGAGCAGGGACAT...AGCAGTATCATGAAGCCCGAAAGCGACAGATCTGTGTTTTTGAAGGCAGAAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CAA 90 bp | AATTATACATACAAACAACAATTACAGGGACTGATTCACAGAGCATGTAGGCCTGCACTCTTTCTCATCTaGCCTGGCCGACCCGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: NYTYKQQLQGLIHRACRPALFLI*PGRPGG Trigger: TCCGCCGGGTCGGCCAGGCAAGATGAGAAAGAGTGC...AGGCCTACATGCTCTGTGAATCAGTCCCTGTAATTGTTGTTTGTATGTATAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTGACAGTGTGCCCATTTGGACATCAGACTTAGTGGTTTCTTCTGTACGGGACGTGGTTGCCTaGACCATCGATGTTAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NKTDSVPIWTSDLVVSSVRDVVA*TIDVKK Trigger: CTTTTTAACATCGATGGTCAAGGCAACCACGTCCCG...TACAGAAGAAACCACTAAGTCTGATGTCCAAATGGGCACACTGTCAGTTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGCAGTGATCACTAATACAGAACACACAGGGGCTAACAGTCAGCCAGGTTTGCACTTTTTCGATTaGCTAGACATCTTCCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKAVITNTEHTGANSQPGLHFFD*LDIFRF Trigger: AAACCGGAAGATGTCTAGCAAATCGAAAAAGTGCAA...ACCTGGCTGACTGTTAGCCCCTGTGTGTTCTGTATTAGTGATCACTGCCTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CCA 72 bp | CGACCCGGCGGATCCCGGGGTGGACAGCGACGGGTCTaGGGAGACGTCTTTCGGCGGGGTGGGCGGGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RPGGSRGGQRRV*GDVFRRGGREG Trigger: ACCTTCCCGCCCACCCCGCCGAAAGACGTCTCCCCAGACCCGTCGCTGTCCACCCCGGGATCCGCCGGGTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS GCA 72 bp | AGGGCTTTGCCGCCATCCAGCCAGGGCAGAGATCCGTaGAGCAGAGGCGGGCGGCATACCTGGCTCCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RALPPSSQGRDP*SRGGRHTWLPW Trigger: CCACGGGAGCCAGGTATGCCGCCCGCCTCTGCTGCACGGATCTCTGCCCTGGCTGGATGGCGGCAAAGCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102976.4 ENSMUST00000130615.2 |
||
| CDS CCA 72 bp | TCTCATCTTGCCTGGCCGACCCGGCGGATCCCGGGGTaGACAGCGACGGGTCTGGGGAGACGTCTTTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SHLAWPTRRIPG*TATGLGRRLSA Trigger: CGCCGAAAGACGTCTCCCCAGACCCGTCGCTGTCCACCCCGGGATCCGCCGGGTCGGCCAGGCAAGATGAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS GCA 72 bp | TCCAGGGCGAGGCGGTGTGGTGGCTGCTCAGGGCTTTaGCGCCATCCAGCCAGGGCAGAGATCCGTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRARRCGGCSGL*RHPARAEIRAA Trigger: TGCTGCACGGATCTCTGCCCTGGCTGGATGGCGGCAAAGCCCTGAGCAGCCACCACACCGCCTCGCCCTGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102976.4 ENSMUST00000130615.2 |
||
| CDS CCA 72 bp | TTGGAGAAGGGGCTGAGGTTCCAGGGCGAGGCGGTGTaGTGGCTGCTCAGGGCTTTGCCGCCATCCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LEKGLRFQGEAV*WLLRALPPSSQ Trigger: CTGGCTGGATGGCGGCAAAGCCCTGAGCAGCCACCACACCGCCTCGCCCTGGAACCTCAGCCCCTTCTCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102976.4 ENSMUST00000130615.2 |
||
| CDS TCA 72 bp | ATGAGGACTGGAGTGGCCGGCCGCCAGAGAAGAGGATaGAGCCGGAGGGTAAACGGACAGAGGCCCCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: MRTGVAGRQRRG*SRRVNGQRPRR Trigger: TCTCCGGGGCCTCTGTCCGTTTACCCTCCGGCTTCATCCTCTTCTCTGGCGGCCGGCCACTCCAGTCCTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102976.4 ENSMUST00000130615.2 |
||
| CDS CAA 90 bp | GCTATCTGGCAGCTGCACCTGATACTTGAGGCACTCTTTCTCATCTaGCCTGGCCGACCCGGCGGATCCCGGGGTGGACAGCGACGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AIWQLHLILEALFLI*PGRPGGSRGGQRRV Trigger: GACCCGTCGCTGTCCACCCCGGGATCCGCCGGGTCGGCCAGGCAAGATGAGAAAGAGTGCCTCAAGTATCAGGTGCAGCTGCCAGATAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CAA 72 bp | CAGCTGCACCTGATACTTGAGGCACTCTTTCTCATCTaGCCTGGCCGACCCGGCGGATCCCGGGGTGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: QLHLILEALFLI*PGRPGGSRGGQ Trigger: CTGTCCACCCCGGGATCCGCCGGGTCGGCCAGGCAAGATGAGAAAGAGTGCCTCAAGTATCAGGTGCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CAA 72 bp | CTCAGGGATGACATGTGTCTGGAGAGAGCGGCCGGGTaGAAGGAGCTGCTCTTGGGGAAGTCCTCCAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LRDDMCLERAAG*KELLLGKSSSA Trigger: CGCGCTGGAGGACTTCCCCAAGAGCAGCTCCTTCAACCCGGCCGCTCTCTCCAGACACATGTCATCCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CAA 90 bp | GAGATGTGGCTCAGGGATGACATGTGTCTGGAGAGAGCGGCCGGGTaGAAGGAGCTGCTCTTGGGGAAGTCCTCCAGCGCGTCATGCACC | + |
|
Preference number: 6 (lower is better) Translates to: EMWLRDDMCLERAAG*KELLLGKSSSASCT Trigger: GGTGCATGACGCGCTGGAGGACTTCCCCAAGAGCAGCTCCTTCAACCCGGCCGCTCTCTCCAGACACATGTCATCCCTGAGCCACATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS TCA 72 bp | TCAGGGATGACATGTGTCTGGAGAGAGCGGCCGGGTTaGAGGAGCTGCTCTTGGGGAAGTCCTCCAGCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SGMTCVWRERPG*RSCSWGSPPAR Trigger: ACGCGCTGGAGGACTTCCCCAAGAGCAGCTCCTTCAACCCGGCCGCTCTCTCCAGACACATGTCATCCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CAA 72 bp | TGTCTGGAGAGAGCGGCCGGGTTGAAGGAGCTGCTCTaGGGGAAGTCCTCCAGCGCGTCATGCACCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLERAAGLKELL*GKSSSASCTFL Trigger: CAAAAAGGTGCATGACGCGCTGGAGGACTTCCCCAAGAGCAGCTCCTTCAACCCGGCCGCTCTCTCCAGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CAA 72 bp | TTCACACACTCCCTGCCTTCTGTGCTGGATCGTGCCTaGGGCCTCGACTTACATCCGAACCCGGTAGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FTHSLPSVLDRA*GLDLHPNPVGD Trigger: ATCCCCTACCGGGTTCGGATGTAAGTCGAGGCCCAAGGCACGATCCAGCACAGAAGGCAGGGAGTGTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS TCA 72 bp | CCAGCTTCATGCTATCTGGCAGCTGCACCTGATACTTaGGGCACTCTTTCTCATCTTGCCTGGCCGACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PASCYLAAAPDT*GTLSHLAWPTR Trigger: CCGGGTCGGCCAGGCAAGATGAGAAAGAGTGCCTCAAGTATCAGGTGCAGCTGCCAGATAGCATGAAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CAA 90 bp | CGTAGCCCTGACGGAGTTTCCGTAGTAGGACGGGACGTGGTTGCCTaGACCATCGATGTTAAAAAGTACGTCCACCTCTTCCGTCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSPDGVSVVGRDVVA*TIDVKKYVHLFRQR Trigger: CCGCTGACGGAAGAGGTGGACGTACTTTTTAACATCGATGGTCAAGGCAACCACGTCCCGTCCTACTACGGAAACTCCGTCAGGGCTACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102976.4 ENSMUST00000130615.2 |
||
| CDS TCA 72 bp | TTAAAAAGTACGTCCACCTCTTCCGTCAGCGGATACTaGGCTTCCATGTACGAATGGCCGAGGCCCGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKSTSTSSVSGY*ASMYEWPRPGW Trigger: CCACCCGGGCCTCGGCCATTCGTACATGGAAGCTCAGTATCCGCTGACGGAAGAGGTGGACGTACTTTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS TCA 72 bp | GACGTCTCCAGCTTCATGCTATCTGGCAGCTGCACCTaGTACTTGAGGCACTCTTTCTCATCTTGCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DVSSFMLSGSCT*YLRHSFSSCLA Trigger: GGCCAGGCAAGATGAGAAAGAGTGCCTCAAGTATCAGGTGCAGCTGCCAGATAGCATGAAGCTGGAGACGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CCA 72 bp | GCCTCGAGAGTGAGACGTCTCCAGCTTCATGCTATCTaGCAGCTGCACCTGATACTTGAGGCACTCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASRVRRLQLHAI*QLHLILEALFL Trigger: GAGAAAGAGTGCCTCAAGTATCAGGTGCAGCTGCCAGATAGCATGAAGCTGGAGACGTCTCACTCTCGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102976.4 |
||
| CDS CAA 72 bp | GACGGAGTTTCCGTAGTAGGACGGGACGTGGTTGCCTaGACCATCGATGTTAAAAAGTACGTCCACCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DGVSVVGRDVVA*TIDVKKYVHLF Trigger: GAAGAGGTGGACGTACTTTTTAACATCGATGGTCAAGGCAACCACGTCCCGTCCTACTACGGAAACTCCGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102976.4 ENSMUST00000130615.2 |
||