Pregenerated sensors for GASK1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027955Ensembl transcript IDs: ENSMUST00000029567.9, ENSMUST00000118853.8
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGCAGGCGGATTTCTGAGTTCAAGGTCAGCCTGGTCTACAGAGTaGGTTCTAGGACAGCCAAGGCTATACAGAGAAACCCTGACTCGA | + |
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Preference number: 1 (lower is better) Translates to: EAGGFLSSRSAWSTE*VLGQPRLYRETLTR Trigger: TCGAGTCAGGGTTTCTCTGTATAGCCTTGGCTGTCCTAGAACTCACTCTGTAGACCAGGCTGACCTTGAACTCAGAAATCCGCCTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR GCA 90 bp | ACTCACCAGAGCCCACAGTCATACTCAGGTCACACTGGAGAGAACTaGAGAGAACGCGACAAAGTTCACCACGCCAAGGGAAAGGAAACA | + |
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Preference number: 1 (lower is better) Translates to: THQSPQSYSGHTGEN*RERDKVHHAKGKET Trigger: TGTTTCCTTTCCCTTGGCGTGGTGAACTTTGTCGCGTTCTCTGCAGTTCTCTCCAGTGTGACCTGAGTATGACTGTGGGCTCTGGTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR TCA 90 bp | AGTGATGGCCTGGCAAATTCTCTCAGGACAGAAAGACTCAGAGCATaGACTTTGTGTGCCTTAGTTCCTCCAAGCCCACGAAAGGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: SDGLANSLRTERLRA*TLCALVPPSPRKVW Trigger: CCAAACCTTTCGTGGGCTTGGAGGAACTAAGGCACACAAAGTTCATGCTCTGAGTCTTTCTGTCCTGAGAGAATTTGCCAGGCCATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR TCA 90 bp | CAGGGTCTGACTGTAGTCCAGGCTGACCCAAACTTAAAGTCAGTCTaGCTCAACTCTTGCATGCTGGAATTCAAGTACACACCATCAGTG | + |
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Preference number: 1 (lower is better) Translates to: QGLTVVQADPNLKSV*LNSCMLEFKYTPSV Trigger: CACTGATGGTGTGTACTTGAATTCCAGCATGCAAGAGTTGAGTCAGACTGACTTTAAGTTTGGGTCAGCCTGGACTACAGTCAGACCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR GCA 90 bp | GGCAAATTCTCTCAGGACAGAAAGACTCAGAGCATGAACTTTGTGTaGCTTAGTTCCTCCAAGCCCACGAAAGGTTTGGTAGAGGGATTT | + |
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Preference number: 1 (lower is better) Translates to: GKFSQDRKTQSMNFV*LSSSKPTKGLVEGF Trigger: AAATCCCTCTACCAAACCTTTCGTGGGCTTGGAGGAACTAAGGCACACAAAGTTCATGCTCTGAGTCTTTCTGTCCTGAGAGAATTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR GCA 90 bp | GCTGGAATTCAAGTACACACCATCAGTGTCTCTAACACACATCAGTaGAGAAGAGTCAGTCTGGTAAATAGCACCCAAGGTGCTTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: AGIQVHTISVSNTHQ*RRVSLVNSTQGACC Trigger: ACAGCAAGCACCTTGGGTGCTATTTACCAGACTGACTCTTCTGCACTGATGTGTGTTAGAGACACTGATGGTGTGTACTTGAATTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR CCA 90 bp | AACGCGACAAAGTTCACCACGCCAAGGGAAAGGAAACATATAGGATaGAAGATGCAGTCCTTGGTCATGAGCCTTGGAAAGCAGAAACAA | + |
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Preference number: 1 (lower is better) Translates to: NATKFTTPRERKHIG*KMQSLVMSLGKQKQ Trigger: TTGTTTCTGCTTTCCAAGGCTCATGACCAAGGACTGCATCTTCCATCCTATATGTTTCCTTTCCCTTGGCGTGGTGAACTTTGTCGCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR CCA 90 bp | TTGCTTAGAATTAAGCATGTTGAAATAACTAGGCAAAAACCCATCTaGGTCAGACCCATCTTGGGGAGGCCAGCTTGCTCAGAAGCATCC | + |
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Preference number: 1 (lower is better) Translates to: LLRIKHVEITRQKPI*VRPILGRPACSEAS Trigger: GGATGCTTCTGAGCAAGCTGGCCTCCCCAAGATGGGTCTGACCCAGATGGGTTTTTGCCTAGTTATTTCAACATGCTTAATTCTAAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR TCA 90 bp | CGATGCTATATGTACACGGAGAGAAAGCATAGTGATCATGAATTATaGCATCAAATTCGTGCACACATGCCTGCACACACGACCCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RCYMYTERKHSDHEL*HQIRAHMPAHTTQA Trigger: TGCCTGGGTCGTGTGTGCAGGCATGTGTGCACGAATTTGATGTCATAATTCATGATCACTATGCTTTCTCTCCGTGTACATATAGCATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAAGAGGCATCAGTGGGTaGCTCTTCCCTTCGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: CFRGSDALLLASMSTAYTRGISG*LFPSSV Trigger: GACAGACGAAGGGAAGAGGCACCCACTGATGCCTCT...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTTCAGCCAGGCAGTGGTaGCGCATGCCTTTAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCSARQW*RMPLNP Trigger: TGGGTTTAAAGGCATGCGCCACCACTGCCTGGCTGA...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAAACAAGAGGCATCAGTaGGTGCCTCTTCCCTTCGTC | + |
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Preference number: 2 (lower is better) Translates to: CFRGSDALLLASMSTAYTNKRHQ*VPLPFV Trigger: GACGAAGGGAAGAGGCACCCACTGATGCCTCTTGTT...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTTGCAGTCCTTGGTCATaGGCCTTGGAAAGCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCCSPWS*ALESRN Trigger: GTTTCTGCTTTCCAAGGCTCATGACCAAGGACTGCA...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR CAA 90 bp | ACCACGCCAAGGGAAAGGAAACATATAGGATGGAAGATGCAGTCCTaGGTCATGAGCCTTGGAAAGCAGAAACAAGAGGCATCAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TTPRERKHIGWKMQS*VMSLGKQKQEASVG Trigger: ACCCACTGATGCCTCTTGTTTCTGCTTTCCAAGGCTCATGACCAAGGACTGCATCTTCCATCCTATATGTTTCCTTTCCCTTGGCGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACACACACTGGAGAGAACTaGAGAGAACGCGACAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: CFRGSDALLLASMSTAYTHTGEN*RERDKV Trigger: AACTTTGTCGCGTTCTCTGCAGTTCTCTCCAGTGTG...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTATCCCAACACTTGGGTaGCAAAGCATCAGAAGACCA | + |
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Preference number: 2 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCIPTLG*QSIRRP Trigger: TGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGAT...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTTGTTATCCCAACACTTaGGTGGCAAAGCATCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCCYPNT*VAKHQK Trigger: CTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACA...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAGAAAGACTCAGAGCATaGACTTTGTGTGCCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: CFRGSDALLLASMSTAYTERLRA*TLCALV Trigger: AACTAAGGCACACAAAGTTCATGCTCTGAGTCTTTC...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATCATTAAAAGTGGGCTaGGGTTATGGGCTTAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: CFRGSDALLLASMSTAYTSLKVG*GYGLSH Trigger: ATGACTAAGCCCATAACCCCAGCCCACTTTTAATGA...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTCTGTATCACTACACCTaGCTAATCAATGACCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCLYHYT*LINDLA Trigger: TGCAAGGTCATTGATTAGCCAGGTGTAGTGATACAG...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTAGGAAACATATAGGATaGAAGATGCAGTCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCRKHIG*KMQSLV Trigger: GACCAAGGACTGCATCTTCCATCCTATATGTTTCCT...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACACGTATTCAACTATGCTaGCTCGTTTCTAGAAACACT | + |
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Preference number: 2 (lower is better) Translates to: CFRGSDALLLASMSTAYTRIQLC*LVSRNT Trigger: AGTGTTTCTAGAAACGAGGCAGCATAGTTGAATACG...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTCAGATGAAACCTAATTaGACCAAGGAAGTCCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCQMKPN*TKEVLY Trigger: ATAGAGGACTTCCTTGGTGCAATTAGGTTTCATCTG...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTTTCTTTGTGAGAAGATaGAGTCATGAGTGTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCFFVRR*SHECWL Trigger: AAGCCAACACTCATGACTGCATCTTCTCACAAAGAA...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTAAGAGCCAGTGTCTCTaGTTTATATTGTTCCGTCAA | + |
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Preference number: 2 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCKSQCL*FILFRQ Trigger: TTGACGGAACAATATAAACCAGAGACACTGGCTCTT...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGCAGTCATGAGTGTTaGCTTTCATTAGGACTTCTT | + |
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Preference number: 2 (lower is better) Translates to: CFRGSDALLLASMSTAYTCSHEC*LSLGLL Trigger: AAGAAGTCCTAATGAAAGCCAACACTCATGACTGCA...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGGGGGAGAATTAGTTaGGACTTAATTTTGCCTAAT | + |
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Preference number: 2 (lower is better) Translates to: CFRGSDALLLASMSTAYTWGRIS*DLILPN Trigger: ATTAGGCAAAATTAAGTCTCAACTAATTCTCCCCCA...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCCGTATTCAACTATGCTaGCTCGTTTCTAGAAACACT | + |
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Preference number: 2 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIRIQLC*LVSRNT Trigger: AGTGTTTCTAGAAACGAGGCAGCATAGTTGAATACG...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCTCACGTATTCAACTATaGTGCCTCGTTTCTAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: TVCYPNTWVAKHQKTKVISRIQL*CLVSRN Trigger: GTTTCTAGAAACGAGGCAGCATAGTTGAATACGTGA...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAGTCAGGTCAGTCAAATaGCATGGGAATGATTTATTA | + |
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Preference number: 2 (lower is better) Translates to: CFRGSDALLLASMSTAYTVRSVK*HGNDLL Trigger: TAATAAATCATTCCCATGCCATTTGACTGACCTGAC...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACAACTTCAGCCAGGCAGTaGTGGCGCATGCCTTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTTSARQ*WRMPLN Trigger: GTTTAAAGGCATGCGCCACCACTGCCTGGCTGAAGT...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAAGGCATGAGACAACTTaGCAGAAATCTTTTAATTCA | + |
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Preference number: 2 (lower is better) Translates to: CFRGSDALLLASMSTAYTRHETT*QKSFNS Trigger: TGAATTAAAAGATTTCTGCCAAGTTGTCTCATGCCT...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACAATCCCAACACTTGGGTaGCAAAGCATCAGAAGACCA | + |
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Preference number: 2 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTIPTLG*QSIRRP Trigger: TGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGAT...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACAGAAAGACTCAGAGCATaGACTTTGTGTGCCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTERLRA*TLCALV Trigger: AACTAAGGCACACAAAGTTCATGCTCTGAGTCTTTC...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR GCA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACATCACGTATTCAACTATaGTGCCTCGTTTCTAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTSRIQL*CLVSRN Trigger: GTTTCTAGAAACGAGGCAGCATAGTTGAATACGTGA...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACAAAGAGAGACAGAATTTaGTCTAGATTCAAAGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTKRDRI*SRFKGS Trigger: GGAACCTTTGAATCTAGAGCAAATTCTGTCTCTCTT...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR TCA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACAAAGAAAAACCAAATGTaGCACATGTATAGCCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTKKNQM*HMYSPQ Trigger: TTGAGGGCTATACATGTGTCACATTTGGTTTTTCTT...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACAAGAAAAACCAAATGTaGCACATGTATAGCCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYKKNQM*HMYSPQ Trigger: TTGAGGGCTATACATGTGTCACATTTGGTTTTTCTT...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACGTTCATGATATAAACTaGGTCAGTTTCACGTATTCA | + |
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Preference number: 2 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYVHDIN*VSFTYS Trigger: TGAATACGTGAAACTGACGCAGTTTATATCATGAAC...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR GCA 72 bp | AGCCCACAGTCATACTCAGGTCACACTGGAGAGAACTaGAGAGAACGCGACAAAGTTCACCACGCCAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SPQSYSGHTGEN*RERDKVHHAKG Trigger: TCCCTTGGCGTGGTGAACTTTGTCGCGTTCTCTGCAGTTCTCTCCAGTGTGACCTGAGTATGACTGTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR CCA 72 bp | GTGCTTGCTGTGTTCTCCAGTGAGACTCCAACTGCTTaGGCTCCAACTCAAAGCATCACGGTGCCACAGTCT | + |
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Preference number: 3 (lower is better) Translates to: VLAVFSSETPTA*APTQSITVPQS Trigger: AGACTGTGGCACCGTGATGCTTTGAGTTGGAGCCCAAGCAGTTGGAGTCTCACTGGAGAACACAGCAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CAA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACACTTGGGGAGGCCAGCTaGCTCAGAAGCATCCTAACT | + |
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Preference number: 3 (lower is better) Translates to: CFRGSDALLLASMSTAYTLGEAS*LRSILT Trigger: AGTTAGGATGCTTCTGAGCAAGCTGGCCTCCCCAAG...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR-3UTR CAA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAAGACTGACATCAGACTaGCAAACCGTCCACGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: CFRGSDALLLASMSTAYTRLTSD*QTVHGF Trigger: GAAGCCGTGGACGGTTTGCAAGTCTGATGTCAGTCT...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR TCA 72 bp | TGGGTGGCAAAGCATCAGAAGACCAAGGTCATCCTCTaGTGCGTAAGGAGTTCAAAGCCAGCCTGGACTATG | + |
|
Preference number: 3 (lower is better) Translates to: WVAKHQKTKVIL*CVRSSKPAWTM Trigger: CATAGTCCAGGCTGGCTTTGAACTCCTTACGCATCAGAGGATGACCTTGGTCTTCTGATGCTTTGCCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR TCA 72 bp | GTAAATAGCACCCAAGGTGCTTGCTGTGTTCTCCAGTaGGACTCCAACTGCTTGGGCTCCAACTCAAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VNSTQGACCVLQ*DSNCLGSNSKH Trigger: ATGCTTTGAGTTGGAGCCCAAGCAGTTGGAGTCTCACTGGAGAACACAGCAAGCACCTTGGGTGCTATTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTTGCCTCTGGATAGTGTaGGAAAAGCTGTTGCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCCLWIV*EKLLQP Trigger: TGGTTGCAACAGCTTTTCCAACACTATCCAGAGGCA...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTGGTGTTTCAAGACTGTaGTACTTGCAGATCAGACGC | + |
|
Preference number: 3 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCGVSRL*YLQIRR Trigger: GCGTCTGATCTGCAAGTACAACAGTCTTGAAACACC...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACACTGTTATCCCAACACTaGGGTGGCAAAGCATCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CFRGSDALLLASMSTAYTLLSQH*GGKASE Trigger: TTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAG...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR TCA 72 bp | GGATTTCTGAGTTCAAGGTCAGCCTGGTCTACAGAGTaGGTTCTAGGACAGCCAAGGCTATACAGAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: GFLSSRSAWSTE*VLGQPRLYRET Trigger: GGTTTCTCTGTATAGCCTTGGCTGTCCTAGAACTCACTCTGTAGACCAGGCTGACCTTGAACTCAGAAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR TCA 72 bp | AAAATGAATGTAAAGGCTGGGGAGATGCCCAGCTGTTaGGAGCATGCACTGCTCTTCCAGAGGACCTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KMNVKAGEMPSC*EHALLFQRTLV Trigger: AACTAAGGTCCTCTGGAAGAGCAGTGCATGCTCTCAACAGCTGGGCATCTCCCCAGCCTTTACATTCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR GCA 72 bp | AAGTCAGGTAGCTCACAATTGCTTCAGAGGTTCCGATaGCCTTCTTCTGGCTTCCATGAGTACTGCATACAC | + |
|
Preference number: 3 (lower is better) Translates to: KSGSSQLLQRFR*PSSGFHEYCIH Trigger: GTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCAATTGTGAGCTACCTGACTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR CCA 72 bp | GGCATGGTGTCATATACTGTCTGTTATCCCAACACTTaGGTGGCAAAGCATCAGAAGACCAAGGTCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GMVSYTVCYPNT*VAKHQKTKVIL Trigger: GAGGATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGTATATGACACCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATTTCGTGATGTAGAATaGCCTCTGGATAGTGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CFRGSDALLLASMSTAYTFRDVE*PLDSVG Trigger: TCCAACACTATCCAGAGGCAATTCTACATCACGAAA...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCTCAAGACTGTTGTACTaGCAGATCAGACGCCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TVCYPNTWVAKHQKTKVISRLLY*QIRRLN Trigger: ATTGAGGCGTCTGATCTGCAAGTACAACAGTCTTGA...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR TCA 72 bp | GCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATaGGTACTGCATACACATGTGTGTGTATACCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: ASEVPMPFFWLP*VLHTHVCVYLC Trigger: ACATAGGTATACACACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR GCA 72 bp | TCTCAGGACAGAAAGACTCAGAGCATGAACTTTGTGTaGCTTAGTTCCTCCAAGCCCACGAAAGGTTTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SQDRKTQSMNFV*LSSSKPTKGLV Trigger: TACCAAACCTTTCGTGGGCTTGGAGGAACTAAGGCACACAAAGTTCATGCTCTGAGTCTTTCTGTCCTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR GCA 72 bp | CAAGTACACACCATCAGTGTCTCTAACACACATCAGTaGAGAAGAGTCAGTCTGGTAAATAGCACCCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QVHTISVSNTHQ*RRVSLVNSTQG Trigger: ACCTTGGGTGCTATTTACCAGACTGACTCTTCTGCACTGATGTGTGTTAGAGACACTGATGGTGTGTACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR CCA 72 bp | TGGTGTCATATACTGTCTGTTATCCCAACACTTGGGTaGCAAAGCATCAGAAGACCAAGGTCATCCTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: WCHILSVIPTLG*QSIRRPRSSSD Trigger: ATCAGAGGATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGTATATGACACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTATGTCCTCGAACCTTTaGCTTAGAATTAAGCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCMSSNL*LRIKHV Trigger: AACATGCTTAATTCTAAGCAAAAGGTTCGAGGACAT...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR TCA 72 bp | ACTGTAGTCCAGGCTGACCCAAACTTAAAGTCAGTCTaGCTCAACTCTTGCATGCTGGAATTCAAGTACACA | + |
|
Preference number: 3 (lower is better) Translates to: TVVQADPNLKSV*LNSCMLEFKYT Trigger: TGTGTACTTGAATTCCAGCATGCAAGAGTTGAGTCAGACTGACTTTAAGTTTGGGTCAGCCTGGACTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR TCA 72 bp | GCTCTAGATTCAAAGGTTCCGTATAAGAAGGATAAGTaGTGGCCTGGCAAATTCTCTCAGGACAGAAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: ALDSKVPYKKDK*WPGKFSQDRKT Trigger: AGTCTTTCTGTCCTGAGAGAATTTGCCAGGCCATCACTTATCCTTCTTATACGGAACCTTTGAATCTAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACATGCCTCTGGATAGTGTaGGAAAAGCTGTTGCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTCLWIV*EKLLQP Trigger: TGGTTGCAACAGCTTTTCCAACACTATCCAGAGGCA...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR GCA 72 bp | GCCATATGCTCTCTATCCATGTTCTTTGTGAGAAGATaGAGTCATGAGTGTTGGCTTTCATTAGGACTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AICSLSMFFVRR*SHECWLSLGLL Trigger: AAGAAGTCCTAATGAAAGCCAACACTCATGACTGCATCTTCTCACAAAGAACATGGATAGAGAGCATATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACAGTGTTGGAAAAGCTGTaGCAACCATCAGCAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTVLEKL*QPSAMR Trigger: TCTCATTGCTGATGGTTGCAACAGCTTTTCCAACAC...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACATCAAGACTGTTGTACTaGCAGATCAGACGCCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTSRLLY*QIRRLN Trigger: ATTGAGGCGTCTGATCTGCAAGTACAACAGTCTTGA...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACAGGTGTTTCAAGACTGTaGTACTTGCAGATCAGACGC | + |
|
Preference number: 3 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTGVSRL*YLQIRR Trigger: GCGTCTGATCTGCAAGTACAACAGTCTTGAAACACC...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACAGTGTTGGAAAAGCTGTaGCAACCATCAGCAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTVLEKL*QPSAMR Trigger: TCTCATTGCTGATGGTTGCAACAGCTTTTCCAACAC...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR TCA 72 bp | CTCTCTATCCATGTTCTTTGTGAGAAGATGCAGTCATaGGTGTTGGCTTTCATTAGGACTTCTTGTATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSIHVLCEKMQS*VLAFIRTSCIE Trigger: CTCAATACAAGAAGTCCTAATGAAAGCCAACACTCATGACTGCATCTTCTCACAAAGAACATGGATAGAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR TCA 72 bp | GTACACTATGATACACTTCCTAAGTACTTAACAACCTaGTTAAAGAGGAGTAAGAGGAAGGAGAGCTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VHYDTLPKYLTT*LKRSKRKESSS Trigger: GCTTGAGCTCTCCTTCCTCTTACTCCTCTTTAATCAGGTTGTTAAGTACTTAGGAAGTGTATCATAGTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTGTCGCCTGCCCATGCTaGAAGGAACCTCTGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCVACPC*KEPLPT Trigger: GGTGGGCAGAGGTTCCTTTCAGCATGGGCAGGCGAC...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTAGATGGCACAGGCAGTaGCCAGCAGGAGGTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCRWHRQ*PAGGSV Trigger: GACGGAACCTCCTGCTGGGCACTGCCTGTGCCATCT...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTGAACCTCTGCCCACCTaGCTCACCAGAAAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCEPLPT*LTRKPR Trigger: CCTGGGCTTTCTGGTGAGCCAGGTGGGCAGAGGTTC...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTATGGCAGGGTCCTGTTaGGACCCAGGATCCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCMAGSC*DPGSCP Trigger: TGGACAGGATCCTGGGTCTCAACAGGACCCTGCCAT...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCGTGCTTCCATTGCCCTaGAACTCTGGAGGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIVLPLP*NSGGAR Trigger: CCTGGCCCCTCCAGAGTTGCAGGGCAATGGAAGCAC...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCCTCATGTCCAGCGGCTaGTTGAGAAGCCCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVCYPNTWVAKHQKTKVILMSSG*LRSPQG Trigger: CCCCTGTGGGCTTCTCAAGCAGCCGCTGGACATGAG...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| 3UTR CAA 72 bp | ACCCATCTGGGTCAGACCCATCTTGGGGAGGCCAGCTaGCTCAGAAGCATCCTAACTGAGAGCATAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: THLGQTHLGEAS*LRSILTESIKA Trigger: TGCTTTTATGCTCTCAGTTAGGATGCTTCTGAGCAAGCTGGCCTCCCCAAGATGGGTCTGACCCAGATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTGCTGAAAGGAACCTCTaGCCACCTGGCTCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCAERNL*PPGSPE Trigger: TTCTGGTGAGCCAGGTGGGCAGAGGTTCCTTTCAGC...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTGGATATTCGCAGGCTTaGTGCGCTTGGAGCGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCGYSQA*CAWSVE Trigger: CTCTACGCTCCAAGCGCAGCAAGCCTGCGAATATCC...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACACCGCATACTTCTTCCTaGGCTTGGGTTTCACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CFRGSDALLLASMSTAYTPHTSS*AWVSPC Trigger: GCACGGTGAAACCCAAGCGCAGGAAGAAGTATGCGG...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCTGCGGATGTCTTCTTTaGTCAGCCATGAGGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TVCYPNTWVAKHQKTKVICGCLL*SAMRGR Trigger: GCGCCCCCTCATGGCTGAGCAAAGAAGACATCCGCA...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTTTGGACCACTCGTGGTaGTGGATTTCAGTGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCLDHSW*WISVQS Trigger: GGACTGCACTGAAATCCATCACCACGAGTGGTCCAA...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCGCTGAAAGGAACCTCTaGCCACCTGGCTCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIAERNL*PPGSPE Trigger: TTCTGGTGAGCCAGGTGGGCAGAGGTTCCTTTCAGC...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTCGTTGGGCTGCAAAGTaGTTCCATTGCCCTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCRWAAK*FHCPAT Trigger: AGTTGCAGGGCAATGGAAGCACTTTGCAGCCCAACG...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTGGTGATGGATTTCAGTaGAGTCCCACTCAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCGDGFQ*SPTQVW Trigger: CCAGACCTGAGTGGGACTGCACTGAAATCCATCACC...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTAGGATCCTGTCCAGGTaGAAGGCGAACACTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCRILSR*KANTSL Trigger: GAGTGAAGTGTTCGCCTTCCACCTGGACAGGATCCT...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAAGGCTGCTGCAAGTTTaGACCTCTAGTTCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFRGSDALLLASMSTAYTRLLQV*TSSSDS Trigger: GGAGTCAGAACTAGAGGTTCAAACTTGCAGCAGCCT...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCATCAGGGGCTGCAGATaGCACCGCATACTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIIRGCR*HRILLP Trigger: AGGAAGAAGTATGCGGTGGCATCTGCAGCCCCTGAT...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCGGTGATGGATTTCAGTaGAGTCCCACTCAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIGDGFQ*SPTQVW Trigger: CCAGACCTGAGTGGGACTGCACTGAAATCCATCACC...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCTTTCCTGCTCACAGATaGCAGGGTCCTGTTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIFPAHR*QGPVET Trigger: GGTCTCAACAGGACCCTGCCATCTGTGAGCAGGAAA...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTCGAGGTCGGCCATCTTaGATGAACTCTAATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCRGRPS*MNSNFL Trigger: CAGGAAATTAGAGTTCATCCAAGATGGCCGACCTCG...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR CAA 72 bp | GGGCATGGTGTCATATACTGTCTGTTATCCCAACACTaGGGTGGCAAAGCATCAGAAGACCAAGGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHGVIYCLLSQH*GGKASEDQGHP Trigger: AGGATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGTATATGACACCATGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR TCA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACACTAACCAGCACCTCCTaGTCAGGGGCTGCAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTLTSTS*SGAADA Trigger: GGCATCTGCAGCCCCTGATCAGGAGGTGCTGGTTAG...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACGTCGCCTGCCCATGCTaGAAGGAACCTCTGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYVACPC*KEPLPT Trigger: GGTGGGCAGAGGTTCCTTTCAGCATGGGCAGGCGAC...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR TCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAAGCCCTTATTGTTTATaGAGACCAAATGCCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFRGSDALLLASMSTAYTSPYCL*RPNALG Trigger: ACCCAAGGCATTTGGTCTTCATAAACAATAAGGGCT...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACAAGATGGCACAGGCAGTaGCCAGCAGGAGGTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTRWHRQ*PAGGSV Trigger: GACGGAACCTCCTGCTGGGCACTGCCTGTGCCATCT...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACACCGCATACTTCTTCCTaGGCTTGGGTTTCACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTPHTSS*AWVSPC Trigger: GCACGGTGAAACCCAAGCGCAGGAAGAAGTATGCGG...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACCTCATGTCCAGCGGCTaGTTGAGAAGCCCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYLMSSG*LRSPQG Trigger: CCCCTGTGGGCTTCTCAAGCAGCCGCTGGACATGAG...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR GCA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACACTTCAAAACAGAAACTaGAGATTCAGGAAACTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CFRGSDALLLASMSTAYTLQNRN*RFRKLS Trigger: CGAGAGTTTCCTGAATCTGCAGTTTCTGTTTTGAAG...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CCA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACAGAAAGCCCAGGTAGATaGCACAGGCAGTGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTESPGR*HRQCPA Trigger: TGCTGGGCACTGCCTGTGCCATCTACCTGGGCTTTC...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACGAACCTCTGCCCACCTaGCTCACCAGAAAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYEPLPT*LTRKPR Trigger: CCTGGGCTTTCTGGTGAGCCAGGTGGGCAGAGGTTC...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCGGGTCATTCTTTCTCTaGATAATGTGTGCTAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIGSFFL*IMCANV Trigger: GACGTTAGCACACATTATCCAGAGAAAGAATGACCC...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR CAA 72 bp | AGGGAAAGGAAACATATAGGATGGAAGATGCAGTCCTaGGTCATGAGCCTTGGAAAGCAGAAACAAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RERKHIGWKMQS*VMSLGKQKQEA Trigger: TGCCTCTTGTTTCTGCTTTCCAAGGCTCATGACCAAGGACTGCATCTTCCATCCTATATGTTTCCTTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR TCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACATGGCAGGGTCCTGTTaGGACCCAGGATCCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYMAGSC*DPGSCP Trigger: TGGACAGGATCCTGGGTCTCAACAGGACCCTGCCAT...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR TCA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACATTGGACCACTCGTGGTaGTGGATTTCAGTGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTLDHSW*WISVQS Trigger: GGACTGCACTGAAATCCATCACCACGAGTGGTCCAA...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR GCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACTGCGGATGTCTTCTTTaGTCAGCCATGAGGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYCGCLL*SAMRGR Trigger: GCGCCCCCTCATGGCTGAGCAAAGAAGACATCCGCA...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTTTTATGAAGACCAAATaGCTTGGGTCATTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCFMKTK*LGSFFL Trigger: GAGAAAGAATGACCCAAGGCATTTGGTCTTCATAAA...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACGAAAGCCCAGGTAGATaGCACAGGCAGTGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYESPGR*HRQCPA Trigger: TGCTGGGCACTGCCTGTGCCATCTACCTGGGCTTTC...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR GCA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACACGTTGGGCTGCAAAGTaGTTCCATTGCCCTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTRWAAK*FHCPAT Trigger: AGTTGCAGGGCAATGGAAGCACTTTGCAGCCCAACG...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR GCA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACACGGGCCCTAGGCTGCTaGAAGTTTGAACCTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTRALGC*KFEPLV Trigger: AACTAGAGGTTCAAACTTGCAGCAGCCTAGGGCCCG...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACACTTCTTCCTGCGCTTaGGTTTCACCGTGCCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYTSSCA*VSPCHG Trigger: TCCGTGGCACGGTGAAACCCAAGCGCAGGAAGAAGT...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR GCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACATCAGGGGCTGCAGATaGCACCGCATACTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYIRGCR*HRILLP Trigger: AGGAAGAAGTATGCGGTGGCATCTGCAGCCCCTGAT...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR GCA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACATCTCGATGCCTTGCCTaGCTCCTTGACTTTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTSRCLA*LLDFPN Trigger: ATTGGGAAAGTCAAGGAGGCAGGCAAGGCATCGAGA...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACAGGATCCTGTCCAGGTaGAAGGCGAACACTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYRILSR*KANTSL Trigger: GAGTGAAGTGTTCGCCTTCCACCTGGACAGGATCCT...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| 3UTR CAA 72 bp | TACTTCCATGTCTACTTAGAAGGTGTTTCAAGACTGTaGTACTTGCAGATCAGACGCCTCAATTTCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YFHVYLEGVSRL*YLQIRRLNFVM Trigger: CATCACGAAATTGAGGCGTCTGATCTGCAAGTACAACAGTCTTGAAACACCTTCTAAGTAGACATGGAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR TCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACAGGCTGCTGCAAGTTTaGACCTCTAGTTCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYRLLQV*TSSSDS Trigger: GGAGTCAGAACTAGAGGTTCAAACTTGCAGCAGCCT...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR GCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACTCTCGATGCCTTGCCTaGCTCCTTGACTTTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYSRCLA*LLDFPN Trigger: ATTGGGAAAGTCAAGGAGGCAGGCAAGGCATCGAGA...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CCA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACACGAGGTCGGCCATCTTaGATGAACTCTAATTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTRGRPS*MNSNFL Trigger: CAGGAAATTAGAGTTCATCCAAGATGGCCGACCTCG...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CCA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACAGGGTCATTCTTTCTCTaGATAATGTGTGCTAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTGSFFL*IMCANV Trigger: GACGTTAGCACACATTATCCAGAGAAAGAATGACCC...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR TCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACTCAAGGAACAGAGACTaGAGGAGCTTCTGTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYSRNRD*RSFCLK Trigger: CTTAAGACAGAAGCTCCTTCAGTCTCTGTTCCTTGA...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR GCA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACACTTCAAAACAGAAACTaGAGATTCAGGAAACTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTLQNRN*RFRKLS Trigger: CGAGAGTTTCCTGAATCTGCAGTTTCTGTTTTGAAG...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR TCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACAGCCCTTATTGTTTATaGAGACCAAATGCCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYSPYCL*RPNALG Trigger: ACCCAAGGCATTTGGTCTTCATAAACAATAAGGGCT...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR GCA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACTTTATGAAGACCAAATaGCTTGGGTCATTCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYFMKTK*LGSFFL Trigger: GAGAAAGAATGACCCAAGGCATTTGGTCTTCATAAA...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS GCA 90 bp | TGCCCACCTGGCTCACCAGAAAGCCCAGGTAGATGGCACAGGCAGTaGCCAGCAGGAGGTTCCGTCTGGTCCTGGGACGCCGACTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPPGSPESPGRWHRQ*PAGGSVWSWDADYS Trigger: GGAGTAGTCGGCGTCCCAGGACCAGACGGAACCTCCTGCTGGGCACTGCCTGTGCCATCTACCTGGGCTTTCTGGTGAGCCAGGTGGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS TCA 90 bp | CTTGAGAAGCCCACAGGGGCTAGGCCCGCAGCCAGGCACAGAGCCTaGGGTGCTCCCTTCCAACACCAGCAAGCGGGTACCACTCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LEKPTGARPAARHRA*GAPFQHQQAGTTLR Trigger: TCTAAGAGTGGTACCCGCTTGCTGGTGTTGGAAGGGAGCACCTCAGGCTCTGTGCCTGGCTGCGGGCCTAGCCCCTGTGGGCTTCTCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 90 bp | TGGGTGGTCCCCTGTCAGTCGCCTGCCCATGCTGAAAGGAACCTCTaGCCACCTGGCTCACCAGAAAGCCCAGGTAGATGGCACAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WVVPCQSPAHAERNL*PPGSPESPGRWHRQ Trigger: CTGCCTGTGCCATCTACCTGGGCTTTCTGGTGAGCCAGGTGGGCAGAGGTTCCTTTCAGCATGGGCAGGCGACTGACAGGGGACCACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 90 bp | ATCCTGTCCAGGTGGAAGGCGAACACTTCACTCATGTCCAGCGGCTaGTTGAGAAGCCCACAGGGGCTAGGCCCGCAGCCAGGCACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILSRWKANTSLMSSG*LRSPQGLGPQPGTE Trigger: CTCTGTGCCTGGCTGCGGGCCTAGCCCCTGTGGGCTTCTCAAGCAGCCGCTGGACATGAGTGAAGTGTTCGCCTTCCACCTGGACAGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 90 bp | GGTAGATGGCACAGGCAGTGCCCAGCAGGAGGTTCCGTCTGGTCCTaGGACGCCGACTACTCCAAAGTTTACACACTCGTGGGGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GRWHRQCPAGGSVWS*DADYSKVYTLVGRT Trigger: TGTGCGCCCCACGAGTGTGTAAACTTTGGAGTAGTCGGCGTCCCAGGACCAGACGGAACCTCCTGCTGGGCACTGCCTGTGCCATCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 90 bp | CCGTCTGGTCCTGGGACGCCGACTACTCCAAAGTTTACACACTCGTaGGGCGCACAGAGAGCAGACAAACCAGTTTACGAGCTGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSGPGTPTTPKFTHS*GAQRADKPVYELPR Trigger: CCGGGGCAGCTCGTAAACTGGTTTGTCTGCTCTCTGTGCGCCCCACGAGTGTGTAAACTTTGGAGTAGTCGGCGTCCCAGGACCAGACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 90 bp | CCTGATCAGGGGCTGCAGATGCCACCGCATACTTCTTCCTGCGCTTaGGTTTCACCGTGCCACGGATATTCGCAGGCTTGCTGCGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PDQGLQMPPHTSSCA*VSPCHGYSQACCAW Trigger: CCAAGCGCAGCAAGCCTGCGAATATCCGTGGCACGGTGAAACCCAAGCGCAGGAAGAAGTATGCGGTGGCATCTGCAGCCCCTGATCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 90 bp | GGCTTGCTGCGCTTGGAGCGTAGAGTAATGTACACCACGTTGGGCTaGAAAGTGCTTCCATTGCCCTGCAACTCTGGAGGGGCCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLLRLERRVMYTTLG*KVLPLPCNSGGARV Trigger: TACCCTGGCCCCTCCAGAGTTGCAGGGCAATGGAAGCACTTTGCAGCCCAACGTGGTGTACATTACTCTACGCTCCAAGCGCAGCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 90 bp | GGGAATCTCAGAGAAGGGTACCTTGAAGATGTCGTGACCGTTGGGTaGTCCCCTGTCAGTCGCCTGCCCATGCTGAAAGGAACCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GNLREGYLEDVVTVG*SPVSRLPMLKGTSA Trigger: GGCAGAGGTTCCTTTCAGCATGGGCAGGCGACTGACAGGGGACCACCCAACGGTCACGACATCTTCAAGGTACCCTTCTCTGAGATTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 90 bp | TACTTCAGCATCTGCTGCCCGTGCAGCTTCCTGCTGTATAAGGGATaGTCTAACCAGCACCTCCTGATCAGGGGCTGCAGATGCCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: YFSICCPCSFLLYKG*SNQHLLIRGCRCHR Trigger: GCGGTGGCATCTGCAGCCCCTGATCAGGAGGTGCTGGTTAGACCATCCCTTATACAGCAGGAAGCTGCACGGGCAGCAGATGCTGAAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 90 bp | CTCACAGATGGCAGGGTCCTGTTGAGACCCAGGATCCTGTCCAGGTaGAAGGCGAACACTTCACTCATGTCCAGCGGCTGCTTGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTDGRVLLRPRILSR*KANTSLMSSGCLRS Trigger: GCTTCTCAAGCAGCCGCTGGACATGAGTGAAGTGTTCGCCTTCCACCTGGACAGGATCCTGGGTCTCAACAGGACCCTGCCATCTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS TCA 90 bp | CGTGCAGCTTCCTGCTGTATAAGGGATGGTCTAACCAGCACCTCCTaGTCAGGGGCTGCAGATGCCACCGCATACTTCTTCCTGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RAASCCIRDGLTSTS*SGAADATAYFFLRL Trigger: CAAGCGCAGGAAGAAGTATGCGGTGGCATCTGCAGCCCCTGATCAGGAGGTGCTGGTTAGACCATCCCTTATACAGCAGGAAGCTGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 90 bp | TATAAGGGATGGTCTAACCAGCACCTCCTGATCAGGGGCTGCAGATaGCACCGCATACTTCTTCCTGCGCTTGGGTTTCACCGTGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: YKGWSNQHLLIRGCR*HRILLPALGFHRAT Trigger: CGTGGCACGGTGAAACCCAAGCGCAGGAAGAAGTATGCGGTGGCATCTGCAGCCCCTGATCAGGAGGTGCTGGTTAGACCATCCCTTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 90 bp | AGAGTAATGTACACCACGTTGGGCTGCAAAGTGCTTCCATTGCCCTaGAACTCTGGAGGGGCCAGGGTACCATCCAGGGGAATCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVMYTTLGCKVLPLP*NSGGARVPSRGISE Trigger: CTCTGAGATTCCCCTGGATGGTACCCTGGCCCCTCCAGAGTTGCAGGGCAATGGAAGCACTTTGCAGCCCAACGTGGTGTACATTACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 90 bp | CTGCTGTATAAGGGATGGTCTAACCAGCACCTCCTGATCAGGGGCTaGAGATGCCACCGCATACTTCTTCCTGCGCTTGGGTTTCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: LLYKGWSNQHLLIRG*RCHRILLPALGFHR Trigger: ACGGTGAAACCCAAGCGCAGGAAGAAGTATGCGGTGGCATCTGCAGCCCCTGATCAGGAGGTGCTGGTTAGACCATCCCTTATACAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS TCA 90 bp | ATAAATCCTAATGTTGCTCTCTCGGGCCCTAGGCTGCTGCAAGTTTaGACCTCTAGTTCTGACTCCAGGACCACGCAGCACCCTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: INPNVALSGPRLLQV*TSSSDSRTTQHPPG Trigger: CCCTGGAGGGTGCTGCGTGGTCCTGGAGTCAGAACTAGAGGTTCAAACTTGCAGCAGCCTAGGGCCCGAGAGAGCAACATTAGGATTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 90 bp | AATCAAAGAGAGCCATCTTGGACCACTCGTGGTGATGGATTTCAGTaGAGTCCCACTCAGGTCTGGGAACCCGGCCATTCAGCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: NQREPSWTTRGDGFQ*SPTQVWEPGHSAST Trigger: AGTGCTGGCTGAATGGCCGGGTTCCCAGACCTGAGTGGGACTGCACTGAAATCCATCACCACGAGTGGTCCAAGATGGCTCTCTTTGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACACGGATATTCGCAGGCTaGCTGCGCTTGGAGCGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: CFRGSDALLLASMSTAYTRIFAG*LRLERR Trigger: TCTACGCTCCAAGCGCAGCAAGCCTGCGAATATCCG...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGCAAAGTGCTTCCATaGCCCTGCAACTCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CFRGSDALLLASMSTAYTCKVLP*PCNSGG Trigger: CCCTCCAGAGTTGCAGGGCAATGGAAGCACTTTGCA...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCCGGATATTCGCAGGCTaGCTGCGCTTGGAGCGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIRIFAG*LRLERR Trigger: TCTACGCTCCAAGCGCAGCAAGCCTGCGAATATCCG...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCTGCAAAGTGCTTCCATaGCCCTGCAACTCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TVCYPNTWVAKHQKTKVICKVLP*PCNSGG Trigger: CCCTCCAGAGTTGCAGGGCAATGGAAGCACTTTGCA...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTGCCTTGCCTGCCTCCTaGACTTTCCCAATAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCALPAS*TFPINL Trigger: CAGGTTTATTGGGAAAGTCAAGGAGGCAGGCAAGGC...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAGTAATGTACACCACGTaGGGCTGCAAAGTGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CFRGSDALLLASMSTAYTVMYTT*GCKVLP Trigger: TGGAAGCACTTTGCAGCCCAACGTGGTGTACATTAC...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCGCCTTGCCTGCCTCCTaGACTTTCCCAATAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIALPAS*TFPINL Trigger: CAGGTTTATTGGGAAAGTCAAGGAGGCAGGCAAGGC...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCAAGCTTCTCGATGCCTaGCCTGCCTCCTTGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIKLLDA*PASLTF Trigger: GAAAGTCAAGGAGGCAGGCAAGGCATCGAGAAGCTT...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 90 bp | GGGTCATTCTTTCTCTGGATAATGTGTGCTAACGTCACAGAAGTTTaGTCCTCACAGTTCGACCGCAGTCCATTCTGTATACAGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GSFFLWIMCANVTEV*SSQFDRSPFCIQAS Trigger: AGATGCCTGTATACAGAATGGACTGCGGTCGAACTGTGAGGACCAAACTTCTGTGACGTTAGCACACATTATCCAGAGAAAGAATGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACACTGCGGATGTCTTCTTaGCTCAGCCATGAGGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTLRMSS*LSHEGA Trigger: CGCCCCCTCATGGCTGAGCAAAGAAGACATCCGCAG...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CAA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAAATGGCTATCATTGCTaGCAGATGCTAGAGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: CFRGSDALLLASMSTAYTNGYHC*QMLEMS Trigger: ACTCATCTCTAGCATCTGCAAGCAATGATAGCCATT...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTAATGGCTATCATTGCTaGCAGATGCTAGAGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCNGYHC*QMLEMS Trigger: ACTCATCTCTAGCATCTGCAAGCAATGATAGCCATT...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACAGCAGGCTTGCTGCGCTaGGAGCGTAGAGTAATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTAGLLR*ERRVMY Trigger: GTACATTACTCTACGCTCCAAGCGCAGCAAGCCTGC...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACCTGCGGATGTCTTCTTaGCTCAGCCATGAGGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYLRMSS*LSHEGA Trigger: CGCCCCCTCATGGCTGAGCAAAGAAGACATCCGCAG...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CAA 90 bp | AGTAGGAATAATCATTTGGGTCATTACACAATGACAATGCTGAGACAAACATACGATGGCAGGGTCCTGTaGAGACCCAGGATCCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRNNHLGHYTMTMLRQTYDGRVL*RPRILS Trigger: GGACAGGATCCTGGGTCTCAACAGGACCCTGCCATC...GTATGTTTGTCTCAGCATTGTCATTGTGTAATGACCCAAATGATTATTCCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACAGGAATCCGCAGCAATTaGTATCCAAGCGATTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: CFRGSDALLLASMSTAYTGIRSN*YPSDYK Trigger: TTTATAATCGCTTGGATACAAATTGCTGCGGATTCC...TGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CAA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCGGAATCCGCAGCAATTaGTATCCAAGCGATTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: TVCYPNTWVAKHQKTKVIGIRSN*YPSDYK Trigger: TTTATAATCGCTTGGATACAAATTGCTGCGGATTCC...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTTCCGATGCCCTTCTTCTGGCTTCCATGAGTACTGCATACACATGTGTTCAAAGAAGCCCTTATaGTTTATGAAGACCAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: QRFRCPSSGFHEYCIHMCSKKPL*FMKTKC Trigger: GCATTTGGTCTTCATAAACAATAAGGGCTTCTTTGA...ACACATGTGTATGCAGTACTCATGGAAGCCAGAAGAAGGGCATCGGAACCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCTTCGTCTGTCTTCTCTTATACCTAACACTTAGACTTACTAGTTTGACAGTAATGTACACCACGTaGGGCTGCAAAGTGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPFVCLLLYLTLRLTSLTVMYTT*GCKVLP Trigger: TGGAAGCACTTTGCAGCCCAACGTGGTGTACATTAC...TGTCAAACTAGTAAGTCTAAGTGTTAGGTATAAGAGAAGACAGACGAAGGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CAA 90 bp | ACTGTCTGTTATCCCAACACTTGGGTGGCAAAGCATCAGAAGACCAAGGTCATCTCAAAGAAGCCCTTATaGTTTATGAAGACCAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: TVCYPNTWVAKHQKTKVISKKPL*FMKTKC Trigger: GCATTTGGTCTTCATAAACAATAAGGGCTTCTTTGA...GATGACCTTGGTCTTCTGATGCTTTGCCACCCAAGTGTTGGGATAACAGACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS-3UTR CAA 90 bp | CAAATTGTTACATATTCATTAAAAGTGGGCTGGGGTTATGGGCTTAGTCATACAAAGCTTCTCGATGCCTaGCCTGCCTCCTTGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QIVTYSLKVGWGYGLSHTKLLDA*PASLTF Trigger: GAAAGTCAAGGAGGCAGGCAAGGCATCGAGAAGCTT...TGTATGACTAAGCCCATAACCCCAGCCCACTTTTAATGAATATGTAACAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CCA 90 bp | CCCTTATTGTTTATGAAGACCAAATGCCTTGGGTCATTCTTTCTCTaGATAATGTGTGCTAACGTCACAGAAGTTTGGTCCTCACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLLFMKTKCLGSFFL*IMCANVTEVWSSQF Trigger: GAACTGTGAGGACCAAACTTCTGTGACGTTAGCACACATTATCCAGAGAAAGAATGACCCAAGGCATTTGGTCTTCATAAACAATAAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS TCA 72 bp | CCCACAGGGGCTAGGCCCGCAGCCAGGCACAGAGCCTaGGGTGCTCCCTTCCAACACCAGCAAGCGGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: PTGARPAARHRA*GAPFQHQQAGT Trigger: GGTACCCGCTTGCTGGTGTTGGAAGGGAGCACCTCAGGCTCTGTGCCTGGCTGCGGGCCTAGCCCCTGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS GCA 72 bp | GGCTCACCAGAAAGCCCAGGTAGATGGCACAGGCAGTaGCCAGCAGGAGGTTCCGTCTGGTCCTGGGACGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSPESPGRWHRQ*PAGGSVWSWDA Trigger: GGCGTCCCAGGACCAGACGGAACCTCCTGCTGGGCACTGCCTGTGCCATCTACCTGGGCTTTCTGGTGAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 72 bp | CTCTGCCCACCTGGCTCACCAGAAAGCCCAGGTAGATaGCACAGGCAGTGCCCAGCAGGAGGTTCCGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCPPGSPESPGR*HRQCPAGGSVW Trigger: CCAGACGGAACCTCCTGCTGGGCACTGCCTGTGCCATCTACCTGGGCTTTCTGGTGAGCCAGGTGGGCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CAA 72 bp | TGGAAGGCGAACACTTCACTCATGTCCAGCGGCTGCTaGAGAAGCCCACAGGGGCTAGGCCCGCAGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WKANTSLMSSGC*RSPQGLGPQPG Trigger: GCCTGGCTGCGGGCCTAGCCCCTGTGGGCTTCTCAAGCAGCCGCTGGACATGAGTGAAGTGTTCGCCTTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CAA 90 bp | CTGTCCAGGTGGAAGGCGAACACTTCACTCATGTCCAGCGGCTGCTaGAGAAGCCCACAGGGGCTAGGCCCGCAGCCAGGCACAGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSRWKANTSLMSSGC*RSPQGLGPQPGTEP Trigger: AGGCTCTGTGCCTGGCTGCGGGCCTAGCCCCTGTGGGCTTCTCAAGCAGCCGCTGGACATGAGTGAAGTGTTCGCCTTCCACCTGGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 72 bp | AGGTGGAAGGCGAACACTTCACTCATGTCCAGCGGCTaGTTGAGAAGCCCACAGGGGCTAGGCCCGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RWKANTSLMSSG*LRSPQGLGPQP Trigger: TGGCTGCGGGCCTAGCCCCTGTGGGCTTCTCAAGCAGCCGCTGGACATGAGTGAAGTGTTCGCCTTCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 72 bp | GGCAGGGTCCTGTTGAGACCCAGGATCCTGTCCAGGTaGAAGGCGAACACTTCACTCATGTCCAGCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRVLLRPRILSR*KANTSLMSSGC Trigger: GCAGCCGCTGGACATGAGTGAAGTGTTCGCCTTCCACCTGGACAGGATCCTGGGTCTCAACAGGACCCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 72 bp | TACACCACGTTGGGCTGCAAAGTGCTTCCATTGCCCTaGAACTCTGGAGGGGCCAGGGTACCATCCAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: YTTLGCKVLPLP*NSGGARVPSRG Trigger: TCCCCTGGATGGTACCCTGGCCCCTCCAGAGTTGCAGGGCAATGGAAGCACTTTGCAGCCCAACGTGGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 72 bp | CCACCGCATACTTCTTCCTGCGCTTGGGTTTCACCGTaGCACGGATATTCGCAGGCTTGCTGCGCTTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPHTSSCAWVSP*HGYSQACCAWS Trigger: GCTCCAAGCGCAGCAAGCCTGCGAATATCCGTGGCACGGTGAAACCCAAGCGCAGGAAGAAGTATGCGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 72 bp | CACAGGCAGTGCCCAGCAGGAGGTTCCGTCTGGTCCTaGGACGCCGACTACTCCAAAGTTTACACACTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: HRQCPAGGSVWS*DADYSKVYTLV Trigger: CACGAGTGTGTAAACTTTGGAGTAGTCGGCGTCCCAGGACCAGACGGAACCTCCTGCTGGGCACTGCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 72 bp | GGGCTGCAGATGCCACCGCATACTTCTTCCTGCGCTTaGGTTTCACCGTGCCACGGATATTCGCAGGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLQMPPHTSSCA*VSPCHGYSQAC Trigger: GCAAGCCTGCGAATATCCGTGGCACGGTGAAACCCAAGCGCAGGAAGAAGTATGCGGTGGCATCTGCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CAA 72 bp | GGGGCTGCAGATGCCACCGCATACTTCTTCCTGCGCTaGGGTTTCACCGTGCCACGGATATTCGCAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GAADATAYFFLR*GFTVPRIFAGL Trigger: CAAGCCTGCGAATATCCGTGGCACGGTGAAACCCAAGCGCAGGAAGAAGTATGCGGTGGCATCTGCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CAA 90 bp | TTCGCAGGCTTGCTGCGCTTGGAGCGTAGAGTAATGTACACCACGTaGGGCTGCAAAGTGCTTCCATTGCCCTGCAACTCTGGAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FAGLLRLERRVMYTT*GCKVLPLPCNSGGA Trigger: GGCCCCTCCAGAGTTGCAGGGCAATGGAAGCACTTTGCAGCCCAACGTGGTGTACATTACTCTACGCTCCAAGCGCAGCAAGCCTGCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS GCA 72 bp | AAGGGATGGTCTAACCAGCACCTCCTGATCAGGGGCTaGAGATGCCACCGCATACTTCTTCCTGCGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KGWSNQHLLIRG*RCHRILLPALG Trigger: CCCAAGCGCAGGAAGAAGTATGCGGTGGCATCTGCAGCCCCTGATCAGGAGGTGCTGGTTAGACCATCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CCA 72 bp | AGATGGCACAGGCAGTGCCCAGCAGGAGGTTCCGTCTaGTCCTGGGACGCCGACTACTCCAAAGTTTACACA | + |
|
Preference number: 6 (lower is better) Translates to: RWHRQCPAGGSV*SWDADYSKVYT Trigger: TGTGTAAACTTTGGAGTAGTCGGCGTCCCAGGACCAGACGGAACCTCCTGCTGGGCACTGCCTGTGCCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CAA 90 bp | GAGCGTAGAGTAATGTACACCACGTTGGGCTGCAAAGTGCTTCCATaGCCCTGCAACTCTGGAGGGGCCAGGGTACCATCCAGGGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: ERRVMYTTLGCKVLP*PCNSGGARVPSRGI Trigger: GATTCCCCTGGATGGTACCCTGGCCCCTCCAGAGTTGCAGGGCAATGGAAGCACTTTGCAGCCCAACGTGGTGTACATTACTCTACGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
||
| CDS CAA 90 bp | TTCTTCCTGCGCTTGGGTTTCACCGTGCCACGGATATTCGCAGGCTaGCTGCGCTTGGAGCGTAGAGTAATGTACACCACGTTGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FFLRLGFTVPRIFAG*LRLERRVMYTTLGC Trigger: GCAGCCCAACGTGGTGTACATTACTCTACGCTCCAAGCGCAGCAAGCCTGCGAATATCCGTGGCACGGTGAAACCCAAGCGCAGGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS TCA 72 bp | GGGTACCATCCAGGGGAATCTCAGAGAAGGGTACCTTaGAGATGTCGTGACCGTTGGGTGGTCCCCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: GYHPGESQRRVP*RCRDRWVVPCQ Trigger: CTGACAGGGGACCACCCAACGGTCACGACATCTTCAAGGTACCCTTCTCTGAGATTCCCCTGGATGGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS GCA 72 bp | TGGTCTAACCAGCACCTCCTGATCAGGGGCTGCAGATaGCACCGCATACTTCTTCCTGCGCTTGGGTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: WSNQHLLIRGCR*HRILLPALGFH Trigger: GTGAAACCCAAGCGCAGGAAGAAGTATGCGGTGGCATCTGCAGCCCCTGATCAGGAGGTGCTGGTTAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 72 bp | GTAATGTACACCACGTTGGGCTGCAAAGTGCTTCCATaGCCCTGCAACTCTGGAGGGGCCAGGGTACCATCC | + |
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Preference number: 6 (lower is better) Translates to: VMYTTLGCKVLP*PCNSGGARVPS Trigger: GGATGGTACCCTGGCCCCTCCAGAGTTGCAGGGCAATGGAAGCACTTTGCAGCCCAACGTGGTGTACATTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 72 bp | TTCACCGTGCCACGGATATTCGCAGGCTTGCTGCGCTaGGAGCGTAGAGTAATGTACACCACGTTGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FTVPRIFAGLLR*ERRVMYTTLGC Trigger: GCAGCCCAACGTGGTGTACATTACTCTACGCTCCAAGCGCAGCAAGCCTGCGAATATCCGTGGCACGGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 72 bp | CGCTTGGGTTTCACCGTGCCACGGATATTCGCAGGCTaGCTGCGCTTGGAGCGTAGAGTAATGTACACCACG | + |
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Preference number: 6 (lower is better) Translates to: RLGFTVPRIFAG*LRLERRVMYTT Trigger: CGTGGTGTACATTACTCTACGCTCCAAGCGCAGCAAGCCTGCGAATATCCGTGGCACGGTGAAACCCAAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 90 bp | CGCTTGGGTTTCACCGTGCCACGGATATTCGCAGGCTTGCTGCGCTaGGAGCGTAGAGTAATGTACACCACGTTGGGCTGCAAAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RLGFTVPRIFAGLLR*ERRVMYTTLGCKVL Trigger: AAGCACTTTGCAGCCCAACGTGGTGTACATTACTCTACGCTCCAAGCGCAGCAAGCCTGCGAATATCCGTGGCACGGTGAAACCCAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS TCA 72 bp | AATGTTGCTCTCTCGGGCCCTAGGCTGCTGCAAGTTTaGACCTCTAGTTCTGACTCCAGGACCACGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: NVALSGPRLLQV*TSSSDSRTTQH Trigger: GTGCTGCGTGGTCCTGGAGTCAGAACTAGAGGTTCAAACTTGCAGCAGCCTAGGGCCCGAGAGAGCAACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS GCA 72 bp | CGCTTGGAGCGTAGAGTAATGTACACCACGTTGGGCTaGAAAGTGCTTCCATTGCCCTGCAACTCTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RLERRVMYTTLG*KVLPLPCNSGG Trigger: CCCTCCAGAGTTGCAGGGCAATGGAAGCACTTTGCAGCCCAACGTGGTGTACATTACTCTACGCTCCAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS GCA 72 bp | TATCAGCCAGGAGGCGCATTCTGCGGATGTCTTCTTTaGTCAGCCATGAGGGGGCGCTCTCGCTATAAATCC | + |
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Preference number: 6 (lower is better) Translates to: YQPGGAFCGCLL*SAMRGRSRYKS Trigger: GGATTTATAGCGAGAGCGCCCCCTCATGGCTGAGCAAAGAAGACATCCGCAGAATGCGCCTCCTGGCTGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CCA 72 bp | CCTGGGACGCCGACTACTCCAAAGTTTACACACTCGTaGGGCGCACAGAGAGCAGACAAACCAGTTTACGAG | + |
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Preference number: 6 (lower is better) Translates to: PGTPTTPKFTHS*GAQRADKPVYE Trigger: CTCGTAAACTGGTTTGTCTGCTCTCTGTGCGCCCCACGAGTGTGTAAACTTTGGAGTAGTCGGCGTCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 72 bp | AACTCTAATTTCCTGCTCACAGATGGCAGGGTCCTGTaGAGACCCAGGATCCTGTCCAGGTGGAAGGCGAAC | + |
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Preference number: 6 (lower is better) Translates to: NSNFLLTDGRVL*RPRILSRWKAN Trigger: GTTCGCCTTCCACCTGGACAGGATCCTGGGTCTCAACAGGACCCTGCCATCTGTGAGCAGGAAATTAGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS GCA 72 bp | CTGAACATAGCCAGGTACTTCAGCATCTGCTGCCCGTaGAGCTTCCTGCTGTATAAGGGATGGTCTAACCAG | + |
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Preference number: 6 (lower is better) Translates to: LNIARYFSICCP*SFLLYKGWSNQ Trigger: CTGGTTAGACCATCCCTTATACAGCAGGAAGCTGCACGGGCAGCAGATGCTGAAGTACCTGGCTATGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS GCA 72 bp | GTAACCCTGAACATAGCCAGGTACTTCAGCATCTGCTaGCCGTGCAGCTTCCTGCTGTATAAGGGATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VTLNIARYFSIC*PCSFLLYKGWS Trigger: AGACCATCCCTTATACAGCAGGAAGCTGCACGGGCAGCAGATGCTGAAGTACCTGGCTATGTTCAGGGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 72 bp | TTGCTGCGCTTGGAGCGTAGAGTAATGTACACCACGTaGGGCTGCAAAGTGCTTCCATTGCCCTGCAACTCT | + |
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Preference number: 6 (lower is better) Translates to: LLRLERRVMYTT*GCKVLPLPCNS Trigger: AGAGTTGCAGGGCAATGGAAGCACTTTGCAGCCCAACGTGGTGTACATTACTCTACGCTCCAAGCGCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 90 bp | TCTTGGATGAACTCTAATTTCCTGCTCACAGATGGCAGGGTCCTGTaGAGACCCAGGATCCTGTCCAGGTGGAAGGCGAACACTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: SWMNSNFLLTDGRVL*RPRILSRWKANTSL Trigger: GAGTGAAGTGTTCGCCTTCCACCTGGACAGGATCCTGGGTCTCAACAGGACCCTGCCATCTGTGAGCAGGAAATTAGAGTTCATCCAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 90 bp | CCGCTCTATCACGTCGATAAGCTTCTCGATGCCTTGCCTGCCTCCTaGACTTTCCCAATAAACCTGATCAAGGAACAGAGACTGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PLYHVDKLLDALPAS*TFPINLIKEQRLKE Trigger: CTCCTTCAGTCTCTGTTCCTTGATCAGGTTTATTGGGAAAGTCAAGGAGGCAGGCAAGGCATCGAGAAGCTTATCGACGTGATAGAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 90 bp | GATTCTGGCTCTCCGCTCTATCACGTCGATAAGCTTCTCGATGCCTaGCCTGCCTCCTTGACTTTCCCAATAAACCTGATCAAGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: DSGSPLYHVDKLLDA*PASLTFPINLIKEQ Trigger: CTGTTCCTTGATCAGGTTTATTGGGAAAGTCAAGGAGGCAGGCAAGGCATCGAGAAGCTTATCGACGTGATAGAGCGGAGAGCCAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 72 bp | TCTCCGCTCTATCACGTCGATAAGCTTCTCGATGCCTaGCCTGCCTCCTTGACTTTCCCAATAAACCTGATC | + |
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Preference number: 6 (lower is better) Translates to: SPLYHVDKLLDA*PASLTFPINLI Trigger: GATCAGGTTTATTGGGAAAGTCAAGGAGGCAGGCAAGGCATCGAGAAGCTTATCGACGTGATAGAGCGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 72 bp | CACGTCGATAAGCTTCTCGATGCCTTGCCTGCCTCCTaGACTTTCCCAATAAACCTGATCAAGGAACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HVDKLLDALPAS*TFPINLIKEQR Trigger: TCTCTGTTCCTTGATCAGGTTTATTGGGAAAGTCAAGGAGGCAGGCAAGGCATCGAGAAGCTTATCGACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 72 bp | GTTCCCCAGGTGATCTTAACAGAGGAATGGCTATCATaGCTTGCAGATGCTAGAGATGAGTCCCAGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: VPQVILTEEWLS*LADARDESQRM Trigger: CATTCTCTGGGACTCATCTCTAGCATCTGCAAGCAATGATAGCCATTCCTCTGTTAAGATCACCTGGGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CCA 72 bp | TTTCTCTGGATAATGTGTGCTAACGTCACAGAAGTTTaGTCCTCACAGTTCGACCGCAGTCCATTCTGTATA | + |
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Preference number: 6 (lower is better) Translates to: FLWIMCANVTEV*SSQFDRSPFCI Trigger: TATACAGAATGGACTGCGGTCGAACTGTGAGGACCAAACTTCTGTGACGTTAGCACACATTATCCAGAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CCA 72 bp | TTTATGAAGACCAAATGCCTTGGGTCATTCTTTCTCTaGATAATGTGTGCTAACGTCACAGAAGTTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: FMKTKCLGSFFL*IMCANVTEVWS Trigger: GGACCAAACTTCTGTGACGTTAGCACACATTATCCAGAGAAAGAATGACCCAAGGCATTTGGTCTTCATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS TCA 72 bp | TATCTTCGCTTCTATCAAAGAAGCCCTTATTGTTTATaGAGACCAAATGCCTTGGGTCATTCTTTCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: YLRFYQRSPYCL*RPNALGHSFSG Trigger: TCCAGAGAAAGAATGACCCAAGGCATTTGGTCTTCATAAACAATAAGGGCTTCTTTGATAGAAGCGAAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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| CDS CAA 72 bp | TTTAAGTTATCTTCGCTTCTATCAAAGAAGCCCTTATaGTTTATGAAGACCAAATGCCTTGGGTCATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: FKLSSLLSKKPL*FMKTKCLGSFF Trigger: AAAGAATGACCCAAGGCATTTGGTCTTCATAAACAATAAGGGCTTCTTTGATAGAAGCGAAGATAACTTAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029567.9 ENSMUST00000118853.8 |
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