Pregenerated sensors for GAS2L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074802Ensembl transcript IDs: ENSMUST00000099374.9, ENSMUST00000105298.3, ENSMUST00000218764.2, ENSMUST00000219351.2, ENSMUST00000220071.2, ENSMUST00000220128.2, ENSMUST00000220234.2
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCTCGCCAGCCAGCTTGTCCCAGGAAATCCTGTCTCTTCCTCCTaGGTGCTGGGACTACAGGCAGACCATCAAGCCCACCCAGATTTG | + |
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Preference number: 1 (lower is better) Translates to: PLASQLVPGNPVSSS*VLGLQADHQAHPDL Trigger: CAAATCTGGGTGGGCTTGATGGTCTGCCTGTAGTCCCAGCACTCAGGAGGAAGAGACAGGATTTCCTGGGACAAGCTGGCTGGCGAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR TCA 90 bp | ACCTGCAAACCCAGTACTCAGGAGACTGAGGCAGGAGGATTGCTATaGGCTCAAGGCCAGCCTGGGCTACCTAGAGAATGCCAGGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: TCKPSTQETEAGGLL*AQGQPGLPRECQAS Trigger: GCTTGCCTGGCATTCTCTAGGTAGCCCAGGCTGGCCTTGAGCTCATAGCAATCCTCCTGCCTCAGTCTCCTGAGTACTGGGTTTGCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR GCA 90 bp | CCGAAACCTGCAAACCCAGTACTCAGGAGACTGAGGCAGGAGGATTaGTATGAGCTCAAGGCCAGCCTGGGCTACCTAGAGAATGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PKPANPVLRRLRQED*YELKASLGYLENAR Trigger: CCTGGCATTCTCTAGGTAGCCCAGGCTGGCCTTGAGCTCATAGCAATCCTCCTGCCTCAGTCTCCTGAGTACTGGGTTTGCAGGTTTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR GCA 90 bp | TCGCCAGCCAGCTTGTCCCAGGAAATCCTGTCTCTTCCTCCTGAGTaGTGGGACTACAGGCAGACCATCAAGCCCACCCAGATTTGTATG | + |
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Preference number: 1 (lower is better) Translates to: SPASLSQEILSLPPE*WDYRQTIKPTQICM Trigger: CATACAAATCTGGGTGGGCTTGATGGTCTGCCTGTAGTCCCAGCACTCAGGAGGAAGAGACAGGATTTCCTGGGACAAGCTGGCTGGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR GCA 90 bp | CAAGGCCAGCCTGGGCTACCTAGAGAATGCCAGGCAAGCTGCATCTaGGTGATGAGACTTTGTGGAGATGACAGGCCAAGGGCACTAAAA | + |
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Preference number: 1 (lower is better) Translates to: QGQPGLPRECQASCI*VMRLCGDDRPRALK Trigger: TTTTAGTGCCCTTGGCCTGTCATCTCCACAAAGTCTCATCACGCAGATGCAGCTTGCCTGGCATTCTCTAGGTAGCCCAGGCTGGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR TCA 90 bp | AGAATGCCAGGCAAGCTGCATCTGCGTGATGAGACTTTGTGGAGATaGCAGGCCAAGGGCACTAAAAGTCCATACATTGGGAAGGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RMPGKLHLRDETLWR*QAKGTKSPYIGKVL Trigger: GAGCACCTTCCCAATGTATGGACTTTTAGTGCCCTTGGCCTGTCATCTCCACAAAGTCTCATCACGCAGATGCAGCTTGCCTGGCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR GCA 90 bp | GTGGTCTTTACCCAAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATaGCAGCAGCCAGCCACGATGCTCACTCATTCAATGATGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: VVFTQGSLAVCRSRE*QQPATMLTHSMMAG Trigger: ACCTGCCATCATTGAATGAGTGAGCATCGTGGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTTGGGTAAAGACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CCA 90 bp | GTTTTGCCTGTATGTGTGCAATATGAATGCCTGGTGCCTGTGTTCTaGAGGCCAGAAGCGAGCATCAGATACCCTGAAACAAGAGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: VLPVCVQYECLVPVF*RPEASIRYPETRVL Trigger: CAGAACTCTTGTTTCAGGGTATCTGATGCTCGCTTCTGGCCTCCAGAACACAGGCACCAGGCATTCATATTGCACACATACAGGCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CCA 90 bp | TACAGGTCAAAACTCACACATTTGTCCATTGATACACAAAATGCATaGGTCCTTTCCCTGACCCAGCTTCATCCCATCTTGACTTCATGT | + |
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Preference number: 1 (lower is better) Translates to: YRSKLTHLSIDTQNA*VLSLTQLHPILTSC Trigger: ACATGAAGTCAAGATGGGATGAAGCTGGGTCAGGGAAAGGACCCATGCATTTTGTGTATCAATGGACAAATGTGTGAGTTTTGACCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| 3UTR TCA 90 bp | ATCATTTACAAGTATCCCTGTGGGTGGAAGGTGTTTATGCTGTCATaGAATCATTGGATATTCCTGACGAGAATCTGCCTACAGAACAGA | + |
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Preference number: 1 (lower is better) Translates to: IIYKYPCGWKVFMLS*NHWIFLTRICLQNR Trigger: TCTGTTCTGTAGGCAGATTCTCGTCAGGAATATCCAATGATTTCATGACAGCATAAACACCTTCCACCCACAGGGATACTTGTAAATGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR CCA 90 bp | ATCGGCTCCTCTCGCCAGCCAGCTTGTCCCAGGAAATCCTGTCTCTTCCTCCTGGATACACAAAATGCATaGGTCCTTTCCCTGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: IGSSRQPACPRKSCLFLLDTQNA*VLSLTQ Trigger: CTGGGTCAGGGAAAGGACCCATGCATTTTGTGTATC...CAGGAGGAAGAGACAGGATTTCCTGGGACAAGCTGGCTGGCGAGAGGAGCCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR GCA 90 bp | AGAACAGAAGGTACACTGTCTGCTGGGCACTGGAAAACTGAGCACAACATGGCCCGCCAAGCAAACCATTaGTTTGTGGCTGAGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: RTEGTLSAGHWKTEHNMARQANH*FVAEHS Trigger: ACTGTGCTCAGCCACAAAGCAATGGTTTGCTTGGCG...GGCCATGTTGTGCTCAGTTTTCCAGTGCCCAGCAGACAGTGTACCTTCTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CAA 90 bp | CATACTGCTTGGGTAAAGATCCAGTGGTCTTTACCCAAGGTTCTCTaGCTGTATGTAGGTCTAGAGAATGCCAGCAGCCAGCCACGATGC | + |
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Preference number: 2 (lower is better) Translates to: HTAWVKIQWSLPKVL*LYVGLENASSQPRC Trigger: GCATCGTGGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTTGGGTAAAGACCACTGGATCTTTACCCAAGCAGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR TCA 90 bp | AGAACAGAAGGTACACTGTCTGCTGGGCACTGGAAAACTGAGCACAACATGGCCAGCTTCATCCCATCTTaGCTTCATGTCTGCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RTEGTLSAGHWKTEHNMASFIPS*LHVCSS Trigger: AGAGCTGCAGACATGAAGTCAAGATGGGATGAAGCT...GGCCATGTTGTGCTCAGTTTTCCAGTGCCCAGCAGACAGTGTACCTTCTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR CCA 90 bp | TTTACCCAAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATGCCAGCAGCCAGCCCTGTCTGCTGGGCACTaGAAAACTGAGCACAACATG | + |
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Preference number: 2 (lower is better) Translates to: FTQGSLAVCRSRECQQPALSAGH*KTEHNM Trigger: CATGTTGTGCTCAGTTTTCCAGTGCCCAGCAGACAG...GGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTTGGGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CAA 90 bp | ACACAAAATGCATGGGTCCTTTCCCTGACCCAGCTTCATCCCATCTaGACTTCATGTCTGCAGCTCTCCGGACAGACACAAATAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: TQNAWVLSLTQLHPI*TSCLQLSGQTQIGR Trigger: TCTTCCTATTTGTGTCTGTCCGGAGAGCTGCAGACATGAAGTCAAGATGGGATGAAGCTGGGTCAGGGAAAGGACCCATGCATTTTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| 3UTR-3UTR CCA 90 bp | CATTGGATATTCCTGACGAGAATCTGCCTACAGAACAGAAGGTACACTGTCTGCCTCAGCCTTCGGAGCTaGGATTACAGGCACACACTA | + |
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Preference number: 2 (lower is better) Translates to: HWIFLTRICLQNRRYTVCLSLRS*DYRHTL Trigger: TAGTGTGTGCCTGTAATCCCAGCTCCGAAGGCTGAG...GCAGACAGTGTACCTTCTGTTCTGTAGGCAGATTCTCGTCAGGAATATCCAATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGAAGCAGAGTGTAAAAAGAATCCCTTCATGGGCTGGTGAGATGGCTCAGCAAACCATTGCTTTGTaGCTGAGCACAGTAACTAGT | + |
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Preference number: 2 (lower is better) Translates to: PQKQSVKRIPSWAGEMAQQTIAL*LSTVTS Trigger: ACTAGTTACTGTGCTCAGCCACAAAGCAATGGTTTG...CTGAGCCATCTCACCAGCCCATGAAGGGATTCTTTTTACACTCTGCTTCTGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR GCA 90 bp | ACGAGAATCTGCCTACAGAACAGAAGGTACACTGTCTGCTGGGCACTGGAAAACCACATTTCAAAACCTTaGTGGCTTCTACTGTGTACC | + |
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Preference number: 2 (lower is better) Translates to: TRICLQNRRYTVCWALENHISKP*WLLLCT Trigger: GGTACACAGTAGAAGCCAGCAAGGTTTTGAAATGTG...GTTTTCCAGTGCCCAGCAGACAGTGTACCTTCTGTTCTGTAGGCAGATTCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR GCA 90 bp | CCCCAGAAGCAGAGTGTAAAAAGAATCCCTTCATGGGCTGGTGAGATGGCTCAGGTGTGTGTGTGTGTGTaGATATGTGAACAGGATATA | + |
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Preference number: 2 (lower is better) Translates to: PQKQSVKRIPSWAGEMAQVCVCV*ICEQDI Trigger: TATATCCTGTTCACATATGCACACACACACACACAC...CTGAGCCATCTCACCAGCCCATGAAGGGATTCTTTTTACACTCTGCTTCTGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATGCCAGCAGCCAGCCACGATGCGTGTGTGTGTGTGTGTaGATATGTGAACAGGATATA | + |
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Preference number: 2 (lower is better) Translates to: KVLLLYVGLENASSQPRCVCVCV*ICEQDI Trigger: TATATCCTGTTCACATATGCACACACACACACACAC...GCATCGTGGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGTACTTAGGATTGCTGGACCAGGATTCCTGACCAATAAATTAGGTGCCTATAGCTTCATCCCATCTTaGCTTCATGTCTGCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LVLRIAGPGFLTNKLGAYSFIPS*LHVCSS Trigger: AGAGCTGCAGACATGAAGTCAAGATGGGATGAAGCT...ATAGGCACCTAATTTATTGGTCAGGAATCCTGGTCCAGCAATCCTAAGTACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| 3UTR-3UTR GCA 90 bp | TTTACCCAAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATGCCAGCAGCCAGCCTCAATATATGTGGTGTaGATGCATGTATGTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: FTQGSLAVCRSRECQQPASIYVV*MHVCES Trigger: AGACTCACATACATGCATGCACACCACATATATTGA...GGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTTGGGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCCTCTCTATGAGGGAATAGCCTCTCTAAAGCTACAATCCTTCCTCTCTGAAGGTGGAAGGTGTTTATaGTGTCATGAAATCATTGGA | + |
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Preference number: 2 (lower is better) Translates to: GPLYEGIASLKLQSFLSEGGRCL*CHEIIG Trigger: TCCAATGATTTCATGACAGCATAAACACCTTCCACC...TTCAGAGAGGAAGGATTGTAGCTTTAGAGAGGCTATTCCCTCATAGAGAGGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR GCA 90 bp | TTGGGAAGGTGCTCTCTTCAAACACCTCCCCAGAAGCAGAGTGTAAAAAGAATCGGTGGAAGGTGTTTATaGTGTCATGAAATCATTGGA | + |
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Preference number: 2 (lower is better) Translates to: LGRCSLQTPPQKQSVKRIGGRCL*CHEIIG Trigger: TCCAATGATTTCATGACAGCATAAACACCTTCCACC...GATTCTTTTTACACTCTGCTTCTGGGGAGGTGTTTGAAGAGAGCACCTTCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CAA 90 bp | GGAAATAGAACTCAGGTTCTCTGCAAGAATACCAAGTGTTCTGAGTaGCTGAGTGTTCTCTCAGTTCCCATGGAACTGAATTACTTATTC | + |
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Preference number: 2 (lower is better) Translates to: GNRTQVLCKNTKCSE*LSVLSVPMELNYLF Trigger: GAATAAGTAATTCAGTTCCATGGGAACTGAGAGAACACTCAGCAACTCAGAACACTTGGTATTCTTGCAGAGAACCTGAGTTCTATTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCATGAAATCATTGGATATTCCTGACGAGAATCTGCCTACAGAACAGAAGTCAATATATGTGGTGTaGATGCATGTATGTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: AVMKSLDIPDENLPTEQKSIYVV*MHVCES Trigger: AGACTCACATACATGCATGCACACCACATATATTGA...CTTCTGTTCTGTAGGCAGATTCTCGTCAGGAATATCCAATGATTTCATGACAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGTTGCTGAGTGTTCTCTCAGTTCCCATGGAACTGAATTACTTATTCACATTGGAGAAATGCTACTaGACAGCAGACAAAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: SELLSVLSVPMELNYLFTLEKCY*TADKNK Trigger: TTTGTTTTTGTCTGCTGTTCAGTAGCATTTCTCCAA...TGTGAATAAGTAATTCAGTTCCATGGGAACTGAGAGAACACTCAGCAACTCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR GCA 90 bp | ATAAATCATTTACAAGTATCCCTGTGGGTGGAAGGTGTTTATGCTGTCATGAAACACATTTCAAAACCTTaGTGGCTTCTACTGTGTACC | + |
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Preference number: 2 (lower is better) Translates to: INHLQVSLWVEGVYAVMKHISKP*WLLLCT Trigger: GGTACACAGTAGAAGCCAGCAAGGTTTTGAAATGTG...TTTCATGACAGCATAAACACCTTCCACCCACAGGGATACTTGTAAATGATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR TCA 72 bp | AGCCAGCTTGTCCCAGGAAATCCTGTCTCTTCCTCCTaGGTGCTGGGACTACAGGCAGACCATCAAGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: SQLVPGNPVSSS*VLGLQADHQAH Trigger: GTGGGCTTGATGGTCTGCCTGTAGTCCCAGCACTCAGGAGGAAGAGACAGGATTTCCTGGGACAAGCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR TCA 72 bp | CCCAGTACTCAGGAGACTGAGGCAGGAGGATTGCTATaGGCTCAAGGCCAGCCTGGGCTACCTAGAGAATGC | + |
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Preference number: 3 (lower is better) Translates to: PSTQETEAGGLL*AQGQPGLPREC Trigger: GCATTCTCTAGGTAGCCCAGGCTGGCCTTGAGCTCATAGCAATCCTCCTGCCTCAGTCTCCTGAGTACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR GCA 72 bp | GCAAACCCAGTACTCAGGAGACTGAGGCAGGAGGATTaGTATGAGCTCAAGGCCAGCCTGGGCTACCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: ANPVLRRLRQED*YELKASLGYLE Trigger: CTCTAGGTAGCCCAGGCTGGCCTTGAGCTCATAGCAATCCTCCTGCCTCAGTCTCCTGAGTACTGGGTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CCA 72 bp | GCTTCTACTGTGTACCCCTGCCTCAGCCTTCGGAGCTaGGATTACAGGCACACACTAGCGCCAAGCAAACCA | + |
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Preference number: 3 (lower is better) Translates to: ASTVYPCLSLRS*DYRHTLAPSKP Trigger: TGGTTTGCTTGGCGCTAGTGTGTGCCTGTAATCCCAGCTCCGAAGGCTGAGGCAGGGGTACACAGTAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| 3UTR GCA 72 bp | CCTGGGCTACCTAGAGAATGCCAGGCAAGCTGCATCTaGGTGATGAGACTTTGTGGAGATGACAGGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: PGLPRECQASCI*VMRLCGDDRPR Trigger: CCTTGGCCTGTCATCTCCACAAAGTCTCATCACGCAGATGCAGCTTGCCTGGCATTCTCTAGGTAGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CCA 72 bp | TTGTCCCAGGAAATCCTGTCTCTTCCTCCTGAGTGCTaGGACTACAGGCAGACCATCAAGCCCACCCAGATT | + |
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Preference number: 3 (lower is better) Translates to: LSQEILSLPPEC*DYRQTIKPTQI Trigger: AATCTGGGTGGGCTTGATGGTCTGCCTGTAGTCCCAGCACTCAGGAGGAAGAGACAGGATTTCCTGGGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CCA 72 bp | AAAAGAATCCCTTCATGGGCTGGTGAGATGGCTCAGTaGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: KRIPSWAGEMAQ*VRAPDCSSEGP Trigger: TGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCATGAAGGGATTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR GCA 72 bp | CATTTCAAAACCTTGCTGGCTTCTACTGTGTACCCCTaGCTCAGCCTTCGGAGCTGGGATTACAGGCACACA | + |
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Preference number: 3 (lower is better) Translates to: HFKTLLASTVYP*LSLRSWDYRHT Trigger: TGTGTGCCTGTAATCCCAGCTCCGAAGGCTGAGGCAGGGGTACACAGTAGAAGCCAGCAAGGTTTTGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| 3UTR CCA 72 bp | CAGAAGCGAGCATCAGATACCCTGAAACAAGAGTTCTaGATGCTTGTGAGCCACCCCGGGAGTGCTGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: QKRASDTLKQEF*MLVSHPGSAGN Trigger: ATTTCCAGCACTCCCGGGGTGGCTCACAAGCATCCAGAACTCTTGTTTCAGGGTATCTGATGCTCGCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR-3UTR CAA 90 bp | AAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATGCCAGCAGCCAGCCACGATGCCAGCTTCATCCCATCTaGACTTCATGTCTGCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: KVLLLYVGLENASSQPRCQLHPI*TSCLQL Trigger: GAGCTGCAGACATGAAGTCAAGATGGGATGAAGCTG...GCATCGTGGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR GCA 72 bp | ACCCAAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATaGCAGCAGCCAGCCACGATGCTCACTCATTCAATG | + |
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Preference number: 3 (lower is better) Translates to: TQGSLAVCRSRE*QQPATMLTHSM Trigger: CATTGAATGAGTGAGCATCGTGGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR GCA 72 bp | AGGCCAAGGGCACTAAAAGTCCATACATTGGGAAGGTaGTCTCTTCAAACACCTCCCCAGAAGCAGAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: RPRALKVHTLGR*SLQTPPQKQSV Trigger: TACACTCTGCTTCTGGGGAGGTGTTTGAAGAGAGCACCTTCCCAATGTATGGACTTTTAGTGCCCTTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CCA 72 bp | GTATGTGTGCAATATGAATGCCTGGTGCCTGTGTTCTaGAGGCCAGAAGCGAGCATCAGATACCCTGAAACA | + |
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Preference number: 3 (lower is better) Translates to: VCVQYECLVPVF*RPEASIRYPET Trigger: TGTTTCAGGGTATCTGATGCTCGCTTCTGGCCTCCAGAACACAGGCACCAGGCATTCATATTGCACACATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR GCA 72 bp | CACCCCGGGAGTGCTGGAAATAGAACTCAGGTTCTCTaGAAGAATACCAAGTGTTCTGAGTTGCTGAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: HPGSAGNRTQVL*KNTKCSELLSV Trigger: AACACTCAGCAACTCAGAACACTTGGTATTCTTGCAGAGAACCTGAGTTCTATTTCCAGCACTCCCGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR GCA 72 bp | ATGTTTTGCCTGTATGTGTGCAATATGAATGCCTGGTaGCTGTGTTCTGGAGGCCAGAAGCGAGCATCAGAT | + |
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Preference number: 3 (lower is better) Translates to: MFCLYVCNMNAW*LCSGGQKRASD Trigger: ATCTGATGCTCGCTTCTGGCCTCCAGAACACAGGCACCAGGCATTCATATTGCACACATACAGGCAAAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CCA 72 bp | ATTAGGTGCCTATTACAGCACATTTCAAAACCTTGCTaGCTTCTACTGTGTACCCCTGCCTCAGCCTTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: IRCLLQHISKPC*LLLCTPASAFG Trigger: TCCGAAGGCTGAGGCAGGGGTACACAGTAGAAGCCAGCAAGGTTTTGAAATGTGCTGTAATAGGCACCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGAGCATCAGATACCCTGAAACAAGAGTTCTGGATGCTTGTGAGCCACCCCGGTCAAAGATGTACATATaGCCATTAGTGATGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ASIRYPETRVLDACEPPRSKMYI*PLVMLR Trigger: TCTGAGCATCACTAATGGCAATATGTACATCTTTGA...CCGGGGTGGCTCACAAGCATCCAGAACTCTTGTTTCAGGGTATCTGATGCTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR TCA 72 bp | TGCATGTATGAATGTTTTGCCTGTATGTGTGCAATATaGATGCCTGGTGCCTGTGTTCTGGAGGCCAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: CMYECFACMCAI*MPGACVLEARS Trigger: GCTTCTGGCCTCCAGAACACAGGCACCAGGCATTCATATTGCACACATACAGGCAAAACATTCATACATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR TCA 72 bp | TGGGTCAACTATTTTGTTTGTGTTAGAAACCGTATTTaGAGGGGCCGAGGAGGAAGCTCAGTCGCAATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: WVNYFVCVRNRI*RGRGGSSVAML Trigger: AAGCATTGCGACTGAGCTTCCTCCTCGGCCCCTTCAAATACGGTTTCTAACACAAACAAAATAGTTGACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAACTCACACATTTGTCCATTGATACACAAAATGCATGGGTCCTTTCCCTGCAGCTTCATCCCATCTaGACTTCATGTCTGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SKLTHLSIDTQNAWVLSLQLHPI*TSCLQL Trigger: GAGCTGCAGACATGAAGTCAAGATGGGATGAAGCTG...CAGGGAAAGGACCCATGCATTTTGTGTATCAATGGACAAATGTGTGAGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| 3UTR TCA 72 bp | AACAGAAGGTACACTGTCTGCTGGGCACTGGAAAACTaGGCACAACATGGCCTTACTAATGAAGATGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: NRRYTVCWALEN*AQHGLTNEDEH Trigger: ATGTTCATCTTCATTAGTAAGGCCATGTTGTGCTCAGTTTTCCAGTGCCCAGCAGACAGTGTACCTTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR CCA 72 bp | AAACTCACACATTTGTCCATTGATACACAAAATGCATaGGTCCTTTCCCTGACCCAGCTTCATCCCATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KLTHLSIDTQNA*VLSLTQLHPIL Trigger: CAAGATGGGATGAAGCTGGGTCAGGGAAAGGACCCATGCATTTTGTGTATCAATGGACAAATGTGTGAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGATATTCCTGACGAGAATCTGCCTACAGAACAGAAGGTACACTGTCTGCTCACACATTTGTCCATaGATACACAAAATGCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: HWIFLTRICLQNRRYTVCSHICP*IHKMHG Trigger: CCCATGCATTTTGTGTATCAATGGACAAATGTGTGA...GCAGACAGTGTACCTTCTGTTCTGTAGGCAGATTCTCGTCAGGAATATCCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGAAGGTGCTCTCTTCAAACACCTCCCCAGAAGCAGAGTGTAAAAAGAATCTCACACATTTGTCCATaGATACACAAAATGCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: LGRCSLQTPPQKQSVKRISHICP*IHKMHG Trigger: CCCATGCATTTTGTGTATCAATGGACAAATGTGTGA...GATTCTTTTTACACTCTGCTTCTGGGGAGGTGTTTGAAGAGAGCACCTTCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR TCA 72 bp | AAGTATCCCTGTGGGTGGAAGGTGTTTATGCTGTCATaGAATCATTGGATATTCCTGACGAGAATCTGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: KYPCGWKVFMLS*NHWIFLTRICL Trigger: TAGGCAGATTCTCGTCAGGAATATCCAATGATTTCATGACAGCATAAACACCTTCCACCCACAGGGATACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR CCA 72 bp | TTTGATTTTATGCATACTGCTTGGGTAAAGATCCAGTaGTCTTTACCCAAGGTTCTCTTGCTGTATGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FDFMHTAWVKIQ*SLPKVLLLYVG Trigger: ACCTACATACAGCAAGAGAACCTTGGGTAAAGACCACTGGATCTTTACCCAAGCAGTATGCATAAAATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR TCA 72 bp | TACACTTCCCTCAAACAGCAGACATCATTAGCAAGATaGTACAGGTCAAAACTCACACATTTGTCCATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: YTSLKQQTSLAR*YRSKLTHLSID Trigger: ATCAATGGACAAATGTGTGAGTTTTGACCTGTATCATCTTGCTAATGATGTCTGCTGTTTGAGGGAAGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| 3UTR CCA 72 bp | ACAAGCCTGTACATAAATCATTTACAAGTATCCCTGTaGGTGGAAGGTGTTTATGCTGTCATGAAATCATTG | + |
|
Preference number: 3 (lower is better) Translates to: TSLYINHLQVSL*VEGVYAVMKSL Trigger: CAATGATTTCATGACAGCATAAACACCTTCCACCCACAGGGATACTTGTAAATGATTTATGTACAGGCTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR TCA 72 bp | ACTATGGGAAAAGGAAGTTTGAAATTCTATTATCAGTaGCTTTCTGTAAGCACAGTGTTGGTGTGTCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: TMGKGSLKFYYQ*LSVSTVLVCPI Trigger: TATAGGACACACCAACACTGTGCTTACAGAAAGTCACTGATAATAGAATTTCAAACTTCCTTTTCCCATAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099374.9 |
||
| 3UTR CAA 72 bp | CTGCCTCTCATCCATCGGCTCCTCTCGCCAGCCAGCTaGTCCCAGGAAATCCTGTCTCTTCCTCCTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLIHRLLSPAS*SQEILSLPPEC Trigger: GCACTCAGGAGGAAGAGACAGGATTTCCTGGGACAAGCTGGCTGGCGAGAGGAGCCGATGGATGAGAGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | AAAGAGCTGCCTCTCATCCATCGGCTCCTCTCGCCAGCCAGCTTGTCCCAGGAAATGAGGGTGGGTCCCTaGAGGAAGTTGGTGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KELPLIHRLLSPASLSQEMRVGP*RKLVAC Trigger: GCAAGCCACCAACTTCCTTCAGGGACCCACCCTCAT...TTCCTGGGACAAGCTGGCTGGCGAGAGGAGCCGATGGATGAGAGGCAGCTCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | ATCGGCTCCTCTCGCCAGCCAGCTTGTCCCAGGAAATCCTGTCTCTTCCTCCTGATGTGTCGGCACCAGTaGAGAAAGTTGGCGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IGSSRQPACPRKSCLFLLMCRHQ*RKLAVL Trigger: CAACACCGCCAACTTTCTTCACTGGTGCCGACACAT...CAGGAGGAAGAGACAGGATTTCCTGGGACAAGCTGGCTGGCGAGAGGAGCCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | TCATCCATCGGCTCCTCTCGCCAGCCAGCTTGTCCCAGGAAATCCTGTCTCTTCTTCATTTCTGGAGGCTaGGGCGTTCTGGCAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSIGSSRQPACPRKSCLFFISGG*GVLAGE Trigger: TTCGCCTGCCAGAACGCCTCAGCCTCCAGAAATGAA...GAAGAGACAGGATTTCCTGGGACAAGCTGGCTGGCGAGAGGAGCCGATGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | ATCGGCTCCTCTCGCCAGCCAGCTTGTCCCAGGAAATCCTGTCTCTTCCTCCTGGAGTCAGGGGACACCTaGGACTTAGAGGCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGSSRQPACPRKSCLFLLESGDT*DLEADL Trigger: AAGATCTGCCTCTAAGTCCCAGGTGTCCCCTGACTC...CAGGAGGAAGAGACAGGATTTCCTGGGACAAGCTGGCTGGCGAGAGGAGCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | TTACAGCACATTTCAAAACCTTGCTGGCTTCTACTGTGTACCCCTGCCTCAGCCGTCCCGGGCCATGTCTaGGAGTCAGGGGACACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQHISKPCWLLLCTPASAVPGHV*ESGDTW Trigger: CCAGGTGTCCCCTGACTCCCAGACATGGCCCGGGAC...GGCTGAGGCAGGGGTACACAGTAGAAGCCAGCAAGGTTTTGAAATGTGCTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | ATCGGCTCCTCTCGCCAGCCAGCTTGTCCCAGGAAATCCTGTCTCTTCCTCCTGCCTGAAGGAAGTTGGTaGCTTGCTGCTTTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGSSRQPACPRKSCLFLLPEGSW*LAAFGR Trigger: CCTCCCAAAAGCAGCAAGCCACCAACTTCCTTCAGG...CAGGAGGAAGAGACAGGATTTCCTGGGACAAGCTGGCTGGCGAGAGGAGCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | TGCTGGCTTCTACTGTGTACCCCTGCCTCAGCCTTCGGAGCTGGGATTACAGGCAGGCACCTTTCTCATTaGAAAGTTCCCTGGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CWLLLCTPASAFGAGITGRHLSH*KVPWLV Trigger: GACGAGCCAGGGAACTTTCCAATGAGAAAGGTGCCT...GCCTGTAATCCCAGCTCCGAAGGCTGAGGCAGGGGTACACAGTAGAAGCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTTCTACTGTGTACCCCTGCCTCAGCCTTCGGAGCTGGGATTACAGGCACTCAATAGAAAACCGATaGGAGCAGCTACAAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LASTVYPCLSLRSWDYRHSIENR*EQLQGG Trigger: CCCTCCTTGTAGCTGCTCTCATCGGTTTTCTATTGA...GTGCCTGTAATCCCAGCTCCGAAGGCTGAGGCAGGGGTACACAGTAGAAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTACTGTGTACCCCTGCCTCAGCCTTCGGAGCTGGGATTACAGGCACACACCAGTCTTGGGGAAGGTaGCACATTTTCGCGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCTPASAFGAGITGTHQSWGR*HIFAMT Trigger: AGTCATCGCGAAAATGTGTCACCTTCCCCAAGACTG...GTGTGTGCCTGTAATCCCAGCTCCGAAGGCTGAGGCAGGGGTACACAGTAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | AAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATGCCAGCAGCCAGCCACGATGCACGGCCAGGAGACTTTaGAGAGCCAGGTCCCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: KVLLLYVGLENASSQPRCTARRL*RARSRI Trigger: AATCCGGGACCTGGCTCTTCAAAGTCTCCTGGCCGT...GCATCGTGGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATGCCAGCAGCCAGCCACGATGATGAGGGTGGGTCCCTaGAGGAAGTTGGTGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGSLAVCRSRECQQPATMMRVGP*RKLVAC Trigger: GCAAGCCACCAACTTCCTTCAGGGACCCACCCTCAT...CATCGTGGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | TACACAAAATGCATGGGTCCTTTCCCTGACCCAGCTTCATCCCATCTTGACTTCGAGGCTGAGGCGTTCTaGCAGGCGAATCTGGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: YTKCMGPFPDPASSHLDFEAEAF*QANLAR Trigger: GCGTGCCAGATTCGCCTGCCAGAACGCCTCAGCCTC...GAAGTCAAGATGGGATGAAGCTGGGTCAGGGAAAGGACCCATGCATTTTGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | GCGAGCATCAGATACCCTGAAACAAGAGTTCTGGATGCTTGTGAGCCACCCCGGAGTACTGGCCCTTCATaGCAGTCTTGGCTGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASIRYPETRVLDACEPPRSTGPS*QSWLTS Trigger: CGAAGTCAGCCAAGACTGCCATGAAGGGCCAGTACT...CCGGGGTGGCTCACAAGCATCCAGAACTCTTGTTTCAGGGTATCTGATGCTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | TCTACTGTGTACCCCTGCCTCAGCCTTCGGAGCTGGGATTACAGGCACACACTAAGTACTGGCCCTTCATaGCAGTCTTGGCTGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: STVYPCLSLRSWDYRHTLSTGPS*QSWLTS Trigger: CGAAGTCAGCCAAGACTGCCATGAAGGGCCAGTACT...TAGTGTGTGCCTGTAATCCCAGCTCCGAAGGCTGAGGCAGGGGTACACAGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTACTGTGTACCCCTGCCTCAGCCTTCGGAGCTGGGATTACAGGCACACACCCTTCTTCCTGGCAGTaGGCATTTTATCTCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCTPASAFGAGITGTHPSSWQ*AFYLRC Trigger: ACAGCGGAGATAAAATGCCCACTGCCAGGAAGAAGG...GTGTGTGCCTGTAATCCCAGCTCCGAAGGCTGAGGCAGGGGTACACAGTAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGGATTACAGGCACACACTAGCGCCAAGCAAACCATTGCTTTGTGGCTGATGTGTCGGCACCAGTaGAGAAAGTTGGCGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELGLQAHTSAKQTIALWLMCRHQ*RKLAVL Trigger: CAACACCGCCAACTTTCTTCACTGGTGCCGACACAT...CAGCCACAAAGCAATGGTTTGCTTGGCGCTAGTGTGTGCCTGTAATCCCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTACTGTGTACCCCTGCCTCAGCCTTCGGAGCTGGGATTACAGGCACACACTTACCTTTCGATCCCTaGGTAGCTTTTGCAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCTPASAFGAGITGTHLPFDP*VAFAED Trigger: GTCCTCTGCAAAAGCTACTCAGGGATCGAAAGGTAA...GTGTGTGCCTGTAATCCCAGCTCCGAAGGCTGAGGCAGGGGTACACAGTAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | CCCCAGAAGCAGAGTGTAAAAAGAATCCCTTCATGGGCTGGTGAGATGGCTCAGCCTGGCTCGTCAGAGTaGCAGCCTTTCACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQKQSVKRIPSWAGEMAQPGSSE*QPFTMF Trigger: GAACATGGTGAAAGGCTGCCACTCTGACGAGCCAGG...CTGAGCCATCTCACCAGCCCATGAAGGGATTCTTTTTACACTCTGCTTCTGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGGATTACAGGCACACACTAGCGCCAAGCAAACCATTGCTTTGTGGCTGTGGCGGTGTTGTCTCTaGCAAAGAATGAGCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELGLQAHTSAKQTIALWLWRCCL*QRMSPK Trigger: CTTCGGGCTCATTCTTTGCCAGAGACAACACCGCCA...CAGCCACAAAGCAATGGTTTGCTTGGCGCTAGTGTGTGCCTGTAATCCCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGAAGGTGCTCTCTTCAAACACCTCCCCAGAAGCAGAGTGTAAAAAGAATCGAGGCTGAGGCGTTCTaGCAGGCGAATCTGGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LGRCSLQTPPQKQSVKRIEAEAF*QANLAR Trigger: GCGTGCCAGATTCGCCTGCCAGAACGCCTCAGCCTC...GATTCTTTTTACACTCTGCTTCTGGGGAGGTGTTTGAAGAGAGCACCTTCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | AGCCCACCCAGATTTGTATGTAGGTATGGGGACACAAACTCCAATCCCCATGCCTGGGCTTGGTCACTTTaGCAGGTGGCTGGAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPPRFVCRYGDTNSNPHAWAWSL*QVAGKE Trigger: CTCCTTTCCAGCCACCTGCCAAAGTGACCAAGCCCA...GGCATGGGGATTGGAGTTTGTGTCCCCATACCTACATACAAATCTGGGTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | CCCCAGAAGCAGAGTGTAAAAAGAATCCCTTCATGGGCTGGTGAGATGGCTCAGTGGGCTTGGTCACTTTaGCAGGTGGCTGGAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQKQSVKRIPSWAGEMAQWAWSL*QVAGKE Trigger: CTCCTTTCCAGCCACCTGCCAAAGTGACCAAGCCCA...CTGAGCCATCTCACCAGCCCATGAAGGGATTCTTTTTACACTCTGCTTCTGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | TTACAGCACATTTCAAAACCTTGCTGGCTTCTACTGTGTACCCCTGCCTCAGCCAGGATTTGGGGATGCTaGTGGACTCTTCAAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LQHISKPCWLLLCTPASARIWGC*WTLQAP Trigger: CGGGGCTTGAAGAGTCCATCAGCATCCCCAAATCCT...GGCTGAGGCAGGGGTACACAGTAGAAGCCAGCAAGGTTTTGAAATGTGCTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR TCA 90 bp | TTACAGCACATTTCAAAACCTTGCTGGCTTCTACTGTGTACCCCTGCCTCAGCCTTCATTTCTGGAGGCTaGGGCGTTCTGGCAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQHISKPCWLLLCTPASAFISGG*GVLAGE Trigger: TTCGCCTGCCAGAACGCCTCAGCCTCCAGAAATGAA...GGCTGAGGCAGGGGTACACAGTAGAAGCCAGCAAGGTTTTGAAATGTGCTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR TCA 90 bp | AGAACAGAAGGTACACTGTCTGCTGGGCACTGGAAAACTGAGCACAACATGGCCCTTGGGATGTGGAAATaGTGCTGGAGAATCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTEGTLSAGHWKTEHNMALGMWK*CWRIWP Trigger: CGGCCAGATTCTCCAGCATCATTTCCACATCCCAAG...GGCCATGTTGTGCTCAGTTTTCCAGTGCCCAGCAGACAGTGTACCTTCTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGGACTACAGGCAGACCATCAAGCCCACCCAGATTTGTATGTAGGTATGCTTGGGATGTGGAAATaGTGCTGGAGAATCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLGLQADHQAHPDLYVGMLGMWK*CWRIWP Trigger: CGGCCAGATTCTCCAGCATCATTTCCACATCCCAAG...CATACCTACATACAAATCTGGGTGGGCTTGATGGTCTGCCTGTAGTCCCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR GCA 90 bp | AAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATGCCAGCAGCCAGCCACGATGCAGGAAGTTGGTGGCTTaGTGCTTTTGGGAGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVLLLYVGLENASSQPRCRKLVA*CFWEAL Trigger: AAGGGCCTCCCAAAAGCAGCAAGCCACCAACTTCCT...GCATCGTGGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | ACGAGAATCTGCCTACAGAACAGAAGGTACACTGTCTGCTGGGCACTGGAAAACCCTGGCTCGTCAGAGTaGCAGCCTTTCACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRICLQNRRYTVCWALENPGSSE*QPFTMF Trigger: GAACATGGTGAAAGGCTGCCACTCTGACGAGCCAGG...GTTTTCCAGTGCCCAGCAGACAGTGTACCTTCTGTTCTGTAGGCAGATTCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | TTACAGCACATTTCAAAACCTTGCTGGCTTCTACTGTGTACCCCTGCCTCAGCCCCTGGCTCGTCAGAGTaGCAGCCTTTCACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQHISKPCWLLLCTPASAPGSSE*QPFTMF Trigger: GAACATGGTGAAAGGCTGCCACTCTGACGAGCCAGG...GGCTGAGGCAGGGGTACACAGTAGAAGCCAGCAAGGTTTTGAAATGTGCTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGAAGCAGAGTGTAAAAAGAATCCCTTCATGGGCTGGTGAGATGGCTCAGGTCCCTGAAGGAAGTTaGTGGCTTGCTGCTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQKQSVKRIPSWAGEMAQVPEGS*WLAAFG Trigger: CCCAAAAGCAGCAAGCCACCAACTTCCTTCAGGGAC...CTGAGCCATCTCACCAGCCCATGAAGGGATTCTTTTTACACTCTGCTTCTGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | TACACAAAATGCATGGGTCCTTTCCCTGACCCAGCTTCATCCCATCTTGACTTCGTTCTAGTGGGTGGCTaGGACTGTGTCCCTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: YTKCMGPFPDPASSHLDFVLVGG*DCVPRP Trigger: AGGTCTAGGGACACAGTCTCAGCCACCCACTAGAAC...GAAGTCAAGATGGGATGAAGCTGGGTCAGGGAAAGGACCCATGCATTTTGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | TTCATGTCTGCAGCTCTCCGGACAGACACAAATAGGAAGATCTTTGGTGATCCTACGGCCAGGAGACTTTaGAGAGCCAGGTCCCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: FMSAALRTDTNRKIFGDPTARRL*RARSRI Trigger: AATCCGGGACCTGGCTCTTCAAAGTCTCCTGGCCGT...AGGATCACCAAAGATCTTCCTATTTGTGTCTGTCCGGAGAGCTGCAGACATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGGATTACAGGCACACACTAGCGCCAAGCAAACCATTGCTTTGTGGCTGTCTGGCAGGCGAATCTaGCACGCTTTCATTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELGLQAHTSAKQTIALWLSGRRI*HAFIRN Trigger: GTTTCTAATGAAAGCGTGCCAGATTCGCCTGCCAGA...CAGCCACAAAGCAATGGTTTGCTTGGCGCTAGTGTGTGCCTGTAATCCCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTACTTAGGATTGCTGGACCAGGATTCCTGACCAATAAATTAGGTGCCTATGAGGCTGAGGCGTTCTaGCAGGCGAATCTGGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLRIAGPGFLTNKLGAYEAEAF*QANLAR Trigger: GCGTGCCAGATTCGCCTGCCAGAACGCCTCAGCCTC...ATAGGCACCTAATTTATTGGTCAGGAATCCTGGTCCAGCAATCCTAAGTACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCACCCAGATTTGTATGTAGGTATGGGGACACAAACTCCAATCCCCATGCCCCTTTAGCTGAGTACTaGCCCTTCATGGCAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPRFVCRYGDTNSNPHAPLAEY*PFMAVL Trigger: CAAGACTGCCATGAAGGGCCAGTACTCAGCTAAAGG...GGCATGGGGATTGGAGTTTGTGTCCCCATACCTACATACAAATCTGGGTGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATGCCAGCAGCCAGCCACGATGCCCTTTAGCTGAGTACTaGCCCTTCATGGCAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVLLLYVGLENASSQPRCPLAEY*PFMAVL Trigger: CAAGACTGCCATGAAGGGCCAGTACTCAGCTAAAGG...GCATCGTGGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR CAA 72 bp | GGAGATGACAGGCCAAGGGCACTAAAAGTCCATACATaGGGAAGGTGCTCTCTTCAAACACCTCCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDDRPRALKVHT*GRCSLQTPPQK Trigger: CTTCTGGGGAGGTGTTTGAAGAGAGCACCTTCCCAATGTATGGACTTTTAGTGCCCTTGGCCTGTCATCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | GCTCTCCGGACAGACACAAATAGGAAGATCTTTGGTGATCCTTGTGGCTCGCCATGTAGTTCTTCTTGCTaGCAGCAGGATTTGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALRTDTNRKIFGDPCGSPCSSSC*QQDLGM Trigger: CATCCCCAAATCCTGCTGTCAGCAAGAAGAACTACA...TGGCGAGCCACAAGGATCACCAAAGATCTTCCTATTTGTGTCTGTCCGGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR TCA 90 bp | ACGAGAATCTGCCTACAGAACAGAAGGTACACTGTCTGCTGGGCACTGGAAAACCAGTCTTGGGGAAGGTaGCACATTTTCGCGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: TRICLQNRRYTVCWALENQSWGR*HIFAMT Trigger: AGTCATCGCGAAAATGTGTCACCTTCCCCAAGACTG...GTTTTCCAGTGCCCAGCAGACAGTGTACCTTCTGTTCTGTAGGCAGATTCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | ATCCAGAATAATATCAAAGTAAACAGCAGGAGCCATTGGTACTTAGGATTGCTGGTCCCGGGCCATGTCTaGGAGTCAGGGGACACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IQNNIKVNSRSHWYLGLLVPGHV*ESGDTW Trigger: CCAGGTGTCCCCTGACTCCCAGACATGGCCCGGGAC...CAGCAATCCTAAGTACCAATGGCTCCTGCTGTTTACTTTGATATTATTCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | CTTCGGAGCTGGGATTACAGGCACACACTAGCGCCAAGCAAACCATTGCTTTGTTCTGGCAGGCGAATCTaGCACGCTTTCATTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRSWDYRHTLAPSKPLLCSGRRI*HAFIRN Trigger: GTTTCTAATGAAAGCGTGCCAGATTCGCCTGCCAGA...ACAAAGCAATGGTTTGCTTGGCGCTAGTGTGTGCCTGTAATCCCAGCTCCGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | CCCATCTTGACTTCATGTCTGCAGCTCTCCGGACAGACACAAATAGGAAGATCTGGTCACTTTGGCAGGTaGCTGGAAAGGAGAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PILTSCLQLSGQTQIGRSGHFGR*LERRRV Trigger: AACCCTTCTCCTTTCCAGCCACCTGCCAAAGTGACC...AGATCTTCCTATTTGTGTCTGTCCGGAGAGCTGCAGACATGAAGTCAAGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | AATCTGCCTACAGAACAGAAGGTACACTGTCTGCTGGGCACTGGAAAACTGAGCCCTTCTTCCTGGCAGTaGGCATTTTATCTCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLPTEQKVHCLLGTGKLSPSSWQ*AFYLRC Trigger: ACAGCGGAGATAAAATGCCCACTGCCAGGAAGAAGG...GCTCAGTTTTCCAGTGCCCAGCAGACAGTGTACCTTCTGTTCTGTAGGCAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | TCTACTGTGTACCCCTGCCTCAGCCTTCGGAGCTGGGATTACAGGCACACACTAATAATCTTTCTGCCTTaGTGTCAACACCTAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: STVYPCLSLRSWDYRHTLIIFLP*CQHLVS Trigger: GCTTACTAGGTGTTGACATCAAGGCAGAAAGATTAT...TAGTGTGTGCCTGTAATCCCAGCTCCGAAGGCTGAGGCAGGGGTACACAGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR TCA 90 bp | GGACAGACACAAATAGGAAGATCTTTGGTGATCCTTGTGGCTCGCCATTCATTGATGTGTCGGCACCAGTaGAGAAAGTTGGCGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQTQIGRSLVILVARHSLMCRHQ*RKLAVL Trigger: CAACACCGCCAACTTTCTTCACTGGTGCCGACACAT...CAATGAATGGCGAGCCACAAGGATCACCAAAGATCTTCCTATTTGTGTCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | CTTAGGATTGCTGGACCAGGATTCCTGACCAATAAATTAGGTGCCTATTACAGCAGGATTTGGGGATGCTaGTGGACTCTTCAAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRIAGPGFLTNKLGAYYSRIWGC*WTLQAP Trigger: CGGGGCTTGAAGAGTCCATCAGCATCCCCAAATCCT...GCTGTAATAGGCACCTAATTTATTGGTCAGGAATCCTGGTCCAGCAATCCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR TCA 90 bp | ACGAGAATCTGCCTACAGAACAGAAGGTACACTGTCTGCTGGGCACTGGAAAACTCAATAGAAAACCGATaGGAGCAGCTACAAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRICLQNRRYTVCWALENSIENR*EQLQGG Trigger: CCCTCCTTGTAGCTGCTCTCATCGGTTTTCTATTGA...GTTTTCCAGTGCCCAGCAGACAGTGTACCTTCTGTTCTGTAGGCAGATTCTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | ATCTTGACTTCATGTCTGCAGCTCTCCGGACAGACACAAATAGGAAGATCTTTGTTCATTTCTGGAGGCTaGGGCGTTCTGGCAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILTSCLQLSGQTQIGRSLFISGG*GVLAGE Trigger: TTCGCCTGCCAGAACGCCTCAGCCTCCAGAAATGAA...CAAAGATCTTCCTATTTGTGTCTGTCCGGAGAGCTGCAGACATGAAGTCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGACTACAGGCAGACCATCAAGCCCACCCAGATTTGTATGTAGGTATGTCTAGTGTAGCAAACTaGAGTATTCGACAGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGLQADHQAHPDLYVGMSSVAN*SIRQGS Trigger: TGACCCCTGTCGAATACTGCAGTTTGCTACACTAGA...CATACCTACATACAAATCTGGGTGGGCTTGATGGTCTGCCTGTAGTCCCAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CCA 90 bp | CATTGGATATTCCTGACGAGAATCTGCCTACAGAACAGAAGGTACACTGTCTGCTGGCGGTGTTGTCTCTaGCAAAGAATGAGCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HWIFLTRICLQNRRYTVCWRCCL*QRMSPK Trigger: CTTCGGGCTCATTCTTTGCCAGAGACAACACCGCCA...GCAGACAGTGTACCTTCTGTTCTGTAGGCAGATTCTCGTCAGGAATATCCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CCA 90 bp | TTCATGTCTGCAGCTCTCCGGACAGACACAAATAGGAAGATCTTTGGTGATCCTTGGCGGTGTTGTCTCTaGCAAAGAATGAGCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FMSAALRTDTNRKIFGDPWRCCL*QRMSPK Trigger: CTTCGGGCTCATTCTTTGCCAGAGACAACACCGCCA...AGGATCACCAAAGATCTTCCTATTTGTGTCTGTCCGGAGAGCTGCAGACATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| CDS-3UTR TCA 90 bp | GAGCTGGGATTACAGGCACACACTAGCGCCAAGCAAACCATTGCTTTGTGGCTGATAATCTTTCTGCCTTaGTGTCAACACCTAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELGLQAHTSAKQTIALWLIIFLP*CQHLVS Trigger: GCTTACTAGGTGTTGACATCAAGGCAGAAAGATTAT...CAGCCACAAAGCAATGGTTTGCTTGGCGCTAGTGTGTGCCTGTAATCCCAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| CDS-3UTR TCA 90 bp | AAACTCACACATTTGTCCATTGATACACAAAATGCATGGGTCCTTTCCCTGACCGTTCTAGTGGGTGGCTaGGACTGTGTCCCTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KLTHLSIDTQNAWVLSLTVLVGG*DCVPRP Trigger: AGGTCTAGGGACACAGTCTCAGCCACCCACTAGAAC...GGTCAGGGAAAGGACCCATGCATTTTGTGTATCAATGGACAAATGTGTGAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR GCA 90 bp | CTTAGGATTGCTGGACCAGGATTCCTGACCAATAAATTAGGTGCCTATTACAGCAGGAAGTTGGTGGCTTaGTGCTTTTGGGAGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRIAGPGFLTNKLGAYYSRKLVA*CFWEAL Trigger: AAGGGCCTCCCAAAAGCAGCAAGCCACCAACTTCCT...GCTGTAATAGGCACCTAATTTATTGGTCAGGAATCCTGGTCCAGCAATCCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | TTCATGTCTGCAGCTCTCCGGACAGACACAAATAGGAAGATCTTTGGTGATCCTAGGCACCTTTCTCATTaGAAAGTTCCCTGGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FMSAALRTDTNRKIFGDPRHLSH*KVPWLV Trigger: GACGAGCCAGGGAACTTTCCAATGAGAAAGGTGCCT...AGGATCACCAAAGATCTTCCTATTTGTGTCTGTCCGGAGAGCTGCAGACATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| CDS-3UTR CCA 90 bp | CTGATTACAGAAATGCCCCTGGCATCTCTTTTGAGTGCTAAGAGGTGCTTTCAAGGTCACTTTGGCAGGTaGCTGGAAAGGAGAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LITEMPLASLLSAKRCFQGHFGR*LERRRV Trigger: AACCCTTCTCCTTTCCAGCCACCTGCCAAAGTGACC...TTGAAAGCACCTCTTAGCACTCAAAAGAGATGCCAGGGGCATTTCTGTAATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | GGACCAGGATTCCTGACCAATAAATTAGGTGCCTATTACAGCACATTTCAAAACAGGATTTGGGGATGCTaGTGGACTCTTCAAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GPGFLTNKLGAYYSTFQNRIWGC*WTLQAP Trigger: CGGGGCTTGAAGAGTCCATCAGCATCCCCAAATCCT...GTTTTGAAATGTGCTGTAATAGGCACCTAATTTATTGGTCAGGAATCCTGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| CDS-3UTR TCA 90 bp | TACACAAAATGCATGGGTCCTTTCCCTGACCCAGCTTCATCCCATCTTGACTTCCTTAGACAGATCTCTTaGATTCTGGGCTGGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTKCMGPFPDPASSHLDFLRQIS*ILGWNS Trigger: GCTATTCCAGCCCAGAATTCAAGAGATCTGTCTAAG...GAAGTCAAGATGGGATGAAGCTGGGTCAGGGAAAGGACCCATGCATTTTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | CATTGGATATTCCTGACGAGAATCTGCCTACAGAACAGAAGGTACACTGTCTGCTTACCTTTCGATCCCTaGGTAGCTTTTGCAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HWIFLTRICLQNRRYTVCLPFDP*VAFAED Trigger: GTCCTCTGCAAAAGCTACTCAGGGATCGAAAGGTAA...GCAGACAGTGTACCTTCTGTTCTGTAGGCAGATTCTCGTCAGGAATATCCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | TTTACCCAAGGTTCTCTTGCTGTATGTAGGTCTAGAGAATGCCAGCAGCCAGCCAGAACATTGATTAGCTaGCACAACAGCACTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: FTQGSLAVCRSRECQQPARTLIS*HNSTPL Trigger: TAATGGAGTGCTGTTGTGTCAGCTAATCAATGTTCT...GGCTGGCTGCTGGCATTCTCTAGACCTACATACAGCAAGAGAACCTTGGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | GAAGGTACACTGTCTGCTGGGCACTGGAAAACTGAGCACAACATGGCCTTACTAAGAACATTGATTAGCTaGCACAACAGCACTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: EGTLSAGHWKTEHNMALLRTLIS*HNSTPL Trigger: TAATGGAGTGCTGTTGTGTCAGCTAATCAATGTTCT...TAGTAAGGCCATGTTGTGCTCAGTTTTCCAGTGCCCAGCAGACAGTGTACCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | CTGATTACAGAAATGCCCCTGGCATCTCTTTTGAGTGCTAAGAGGTGCTTTCAATGTAGTTCTTCTTGCTaGCAGCAGGATTTGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LITEMPLASLLSAKRCFQCSSSC*QQDLGM Trigger: CATCCCCAAATCCTGCTGTCAGCAAGAAGAACTACA...TTGAAAGCACCTCTTAGCACTCAAAAGAGATGCCAGGGGCATTTCTGTAATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CCA 90 bp | TCTGAGTTGCTGAGTGTTCTCTCAGTTCCCATGGAACTGAATTACTTATTCACATCCCCAAACCACACTTaGATTGCAGGCTGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SELLSVLSVPMELNYLFTSPNHT*IAGCMV Trigger: GACCATGCAGCCTGCAATCCAAGTGTGGTTTGGGGA...TGTGAATAAGTAATTCAGTTCCATGGGAACTGAGAGAACACTCAGCAACTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | CTGACCAATAAATTAGGTGCCTATTACAGCACATTTCAAAACCTTGCTGGCTTCTCCCCAAACCACACTTaGATTGCAGGCTGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTNKLGAYYSTFQNLAGFSPNHT*IAGCMV Trigger: GACCATGCAGCCTGCAATCCAAGTGTGGTTTGGGGA...GAAGCCAGCAAGGTTTTGAAATGTGCTGTAATAGGCACCTAATTTATTGGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTCATGAAATCATTGGATATTCCTGACGAGAATCTGCCTACAGAACAGAAGGCTTGGTTTAGACCCTaGATTTGGAGAAGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVMKSLDIPDENLPTEQKAWFRP*IWRSQG Trigger: TCCCTGGCTTCTCCAAATCCAGGGTCTAAACCAAGC...CTTCTGTTCTGTAGGCAGATTCTCGTCAGGAATATCCAATGATTTCATGACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | GCTCTCCGGACAGACACAAATAGGAAGATCTTTGGTGATCCTTGTGGCTCGCCATCTGAGGTTGCTTTTTaGCAACTGAAACTGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALRTDTNRKIFGDPCGSPSEVAF*QLKLYS Trigger: AGAATACAGTTTCAGTTGCCAAAAAGCAACCTCAGA...TGGCGAGCCACAAGGATCACCAAAGATCTTCCTATTTGTGTCTGTCCGGAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | GGACCAGGATTCCTGACCAATAAATTAGGTGCCTATTACAGCACATTTCAAAACCCTGAAGGAAGTTGGTaGCTTGCTGCTTTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGFLTNKLGAYYSTFQNPEGSW*LAAFGR Trigger: CCTCCCAAAAGCAGCAAGCCACCAACTTCCTTCAGG...GTTTTGAAATGTGCTGTAATAGGCACCTAATTTATTGGTCAGGAATCCTGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | CCCATCTTGACTTCATGTCTGCAGCTCTCCGGACAGACACAAATAGGAAGATCTATAATCTTTCTGCCTTaGTGTCAACACCTAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PILTSCLQLSGQTQIGRSIIFLP*CQHLVS Trigger: GCTTACTAGGTGTTGACATCAAGGCAGAAAGATTAT...AGATCTTCCTATTTGTGTCTGTCCGGAGAGCTGCAGACATGAAGTCAAGATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR TCA 90 bp | AAACTCACACATTTGTCCATTGATACACAAAATGCATGGGTCCTTTCCCTGACCTGTAGTTCTTCTTGCTaGCAGCAGGATTTGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KLTHLSIDTQNAWVLSLTCSSSC*QQDLGM Trigger: CATCCCCAAATCCTGCTGTCAGCAAGAAGAACTACA...GGTCAGGGAAAGGACCCATGCATTTTGTGTATCAATGGACAAATGTGTGAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGGATTGCTGGACCAGGATTCCTGACCAATAAATTAGGTGCCTATTACAGCTCTAGTGTAGCAAACTaGAGTATTCGACAGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRIAGPGFLTNKLGAYYSSSVAN*SIRQGS Trigger: TGACCCCTGTCGAATACTGCAGTTTGCTACACTAGA...GCTGTAATAGGCACCTAATTTATTGGTCAGGAATCCTGGTCCAGCAATCCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAACTCACACATTTGTCCATTGATACACAAAATGCATGGGTCCTTTCCCTGAGGCACCTTTCTCATTaGAAAGTTCCCTGGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKLTHLSIDTQNAWVLSLRHLSH*KVPWLV Trigger: GACGAGCCAGGGAACTTTCCAATGAGAAAGGTGCCT...CAGGGAAAGGACCCATGCATTTTGTGTATCAATGGACAAATGTGTGAGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTCCGGACAGACACAAATAGGAAGATCTTTGGTGATCCTTGTGGCTCGCCAAAAGGTACACCTGTCTaGGATCTTTATGTAAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: ALRTDTNRKIFGDPCGSPKGTPV*DLYVKL Trigger: TAGTTTTACATAAAGATCCCAGACAGGTGTACCTTT...TGGCGAGCCACAAGGATCACCAAAGATCTTCCTATTTGTGTCTGTCCGGAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTACTTAGGATTGCTGGACCAGGATTCCTGACCAATAAATTAGGTGCCTATTCTGGCAGGCGAATCTaGCACGCTTTCATTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLRIAGPGFLTNKLGAYSGRRI*HAFIRN Trigger: GTTTCTAATGAAAGCGTGCCAGATTCGCCTGCCAGA...ATAGGCACCTAATTTATTGGTCAGGAATCCTGGTCCAGCAATCCTAAGTACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | CTGACCAATAAATTAGGTGCCTATTACAGCACATTTCAAAACCTTGCTGGCTTCGCTTGGTTTAGACCCTaGATTTGGAGAAGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTNKLGAYYSTFQNLAGFAWFRP*IWRSQG Trigger: TCCCTGGCTTCTCCAAATCCAGGGTCTAAACCAAGC...GAAGCCAGCAAGGTTTTGAAATGTGCTGTAATAGGCACCTAATTTATTGGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | ATCCAGAATAATATCAAAGTAAACAGCAGGAGCCATTGGTACTTAGGATTGCTGGTCCCTGAAGGAAGTTaGTGGCTTGCTGCTTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IQNNIKVNSRSHWYLGLLVPEGS*WLAAFG Trigger: CCCAAAAGCAGCAAGCCACCAACTTCCTTCAGGGAC...CAGCAATCCTAAGTACCAATGGCTCCTGCTGTTTACTTTGATATTATTCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR CAA 72 bp | CTGTGGGTGGAAGGTGTTTATGCTGTCATGAAATCATaGGATATTCCTGACGAGAATCTGCCTACAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LWVEGVYAVMKS*DIPDENLPTEQ Trigger: CTGTTCTGTAGGCAGATTCTCGTCAGGAATATCCAATGATTTCATGACAGCATAAACACCTTCCACCCACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| 3UTR CAA 72 bp | CACTCATTCAATGATGGCAGGTCTGGGTCAACTATTTaGTTTGTGTTAGAAACCGTATTTGAAGGGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSFNDGRSGSTI*FVLETVFEGAE Trigger: CTCGGCCCCTTCAAATACGGTTTCTAACACAAACAAAATAGTTGACCCAGACCTGCCATCATTGAATGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| 3UTR CAA 72 bp | ACTCAGGTTCTCTGCAAGAATACCAAGTGTTCTGAGTaGCTGAGTGTTCTCTCAGTTCCCATGGAACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TQVLCKNTKCSE*LSVLSVPMELN Trigger: ATTCAGTTCCATGGGAACTGAGAGAACACTCAGCAACTCAGAACACTTGGTATTCTTGCAGAGAACCTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTTGCTGAGTGTTCTCTCAGTTCCCATGGAACTGAATTACTTATTCACATCAATAGAAAACCGATaGGAGCAGCTACAAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SELLSVLSVPMELNYLFTSIENR*EQLQGG Trigger: CCCTCCTTGTAGCTGCTCTCATCGGTTTTCTATTGA...TGTGAATAAGTAATTCAGTTCCATGGGAACTGAGAGAACACTCAGCAACTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | TACACAAAATGCATGGGTCCTTTCCCTGACCCAGCTTCATCCCATCTTGACTTCAAATTCAATGTAGACTaGAGTCTTTGTGCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: YTKCMGPFPDPASSHLDFKFNVD*SLCAET Trigger: AGTCTCAGCACAAAGACTTCAGTCTACATTGAATTT...GAAGTCAAGATGGGATGAAGCTGGGTCAGGGAAAGGACCCATGCATTTTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | ATAAATCATTTACAAGTATCCCTGTGGGTGGAAGGTGTTTATGCTGTCATGAAATCCCCAAACCACACTTaGATTGCAGGCTGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: INHLQVSLWVEGVYAVMKSPNHT*IAGCMV Trigger: GACCATGCAGCCTGCAATCCAAGTGTGGTTTGGGGA...TTTCATGACAGCATAAACACCTTCCACCCACAGGGATACTTGTAAATGATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | ATAAATCATTTACAAGTATCCCTGTGGGTGGAAGGTGTTTATGCTGTCATGAAAGAGTCAGGGGACACCTaGGACTTAGAGGCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: INHLQVSLWVEGVYAVMKESGDT*DLEADL Trigger: AAGATCTGCCTCTAAGTCCCAGGTGTCCCCTGACTC...TTTCATGACAGCATAAACACCTTCCACCCACAGGGATACTTGTAAATGATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | TCAAAACTCACACATTTGTCCATTGATACACAAAATGCATGGGTCCTTTCCCTGCTTAGACAGATCTCTTaGATTCTGGGCTGGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLTHLSIDTQNAWVLSLLRQIS*ILGWNS Trigger: GCTATTCCAGCCCAGAATTCAAGAGATCTGTCTAAG...CAGGGAAAGGACCCATGCATTTTGTGTATCAATGGACAAATGTGTGAGTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR TCA 90 bp | TTCATGTCTGCAGCTCTCCGGACAGACACAAATAGGAAGATCTTTGGTGATCCTAAATTCAATGTAGACTaGAGTCTTTGTGCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FMSAALRTDTNRKIFGDPKFNVD*SLCAET Trigger: AGTCTCAGCACAAAGACTTCAGTCTACATTGAATTT...AGGATCACCAAAGATCTTCCTATTTGTGTCTGTCCGGAGAGCTGCAGACATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR GCA 90 bp | TCAAAACTCACACATTTGTCCATTGATACACAAAATGCATGGGTCCTTTCCCTGTCTAGTGTAGCAAACTaGAGTATTCGACAGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKLTHLSIDTQNAWVLSLSSVAN*SIRQGS Trigger: TGACCCCTGTCGAATACTGCAGTTTGCTACACTAGA...CAGGGAAAGGACCCATGCATTTTGTGTATCAATGGACAAATGTGTGAGTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | TACACAAAATGCATGGGTCCTTTCCCTGACCCAGCTTCATCCCATCTTGACTTCAAAGGTACACCTGTCTaGGATCTTTATGTAAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: YTKCMGPFPDPASSHLDFKGTPV*DLYVKL Trigger: TAGTTTTACATAAAGATCCCAGACAGGTGTACCTTT...GAAGTCAAGATGGGATGAAGCTGGGTCAGGGAAAGGACCCATGCATTTTGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTACTTAGGATTGCTGGACCAGGATTCCTGACCAATAAATTAGGTGCCTATTCAAAGATGTCACCTTaGGATGTGGAAATGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLRIAGPGFLTNKLGAYSKMSP*DVEMML Trigger: CAGCATCATTTCCACATCCCAAGGTGACATCTTTGA...ATAGGCACCTAATTTATTGGTCAGGAATCCTGGTCCAGCAATCCTAAGTACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | ATCCAGAATAATATCAAAGTAAACAGCAGGAGCCATTGGTACTTAGGATTGCTGTCAAAGATGTCACCTTaGGATGTGGAAATGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQNNIKVNSRSHWYLGLLSKMSP*DVEMML Trigger: CAGCATCATTTCCACATCCCAAGGTGACATCTTTGA...CAGCAATCCTAAGTACCAATGGCTCCTGCTGTTTACTTTGATATTATTCTGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTTGCTGAGTGTTCTCTCAGTTCCCATGGAACTGAATTACTTATTCACATCTGAGGTTGCTTTTTaGCAACTGAAACTGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SELLSVLSVPMELNYLFTSEVAF*QLKLYS Trigger: AGAATACAGTTTCAGTTGCCAAAAAGCAACCTCAGA...TGTGAATAAGTAATTCAGTTCCATGGGAACTGAGAGAACACTCAGCAACTCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CCA 90 bp | ATCCAGAATAATATCAAAGTAAACAGCAGGAGCCATTGGTACTTAGGATTGCTGAAAGGTACACCTGTCTaGGATCTTTATGTAAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: IQNNIKVNSRSHWYLGLLKGTPV*DLYVKL Trigger: TAGTTTTACATAAAGATCCCAGACAGGTGTACCTTT...CAGCAATCCTAAGTACCAATGGCTCCTGCTGTTTACTTTGATATTATTCTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| CDS CCA 90 bp | GGCAGCAGGGTGGCTTCATGTCTCACGGCTATCCACTCGTCATACTaGCAAACGTCAGCCAGTCCCGGGCCATGTCTGGGAGTCAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSRVASCLTAIHSSY*QTSASPGPCLGVRG Trigger: TCCCCTGACTCCCAGACATGGCCCGGGACTGGCTGACGTTTGCCAGTATGACGAGTGGATAGCCGTGAGACATGAAGCCACCCTGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 ENSMUST00000220234.2 |
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| CDS TCA 90 bp | TTGGGGAACAGTCACAATAGACAGCGGGGTACGGCCAGGAGACTTTaGAGAGCCAGGTCCCGGATTCCGGCAGACACCCTTACTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGNSHNRQRGTARRL*RARSRIPADTLTLR Trigger: CCTCAGAGTAAGGGTGTCTGCCGGAATCCGGGACCTGGCTCTTCAAAGTCTCCTGGCCGTACCCCGCTGTCTATTGTGACTGTTCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS TCA 90 bp | CTTTGTGCTGAGACTGCTCCTGACCTCGGCGTTCTAGTGGGTGGCTaGGACTGTGTCCCTAGACCTATGGCTCCGGTTTTAGAACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCAETAPDLGVLVGG*DCVPRPMAPVLELG Trigger: GCCCAGTTCTAAAACCGGAGCCATAGGTCTAGGGACACAGTCTCAGCCACCCACTAGAACGCCGAGGTCAGGAGCAGTCTCAGCACAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CCA 90 bp | ATGGCTCCGGTTTTAGAACTGGGCTTGGTCACTTTGGCAGGTGGCTaGAAAGGAGAAGGGTTAGGCCTTCCGTGCATGGCTCCTTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MAPVLELGLVTLAGG*KGEGLGLPCMAPLG Trigger: ACCTAAAGGAGCCATGCACGGAAGGCCTAACCCTTCTCCTTTCCAGCCACCTGCCAAAGTGACCAAGCCCAGTTCTAAAACCGGAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CAA 90 bp | AGCCCACCCAGATTTGTATGTAGGTATGGGGACACAAACTCCAATCCCCATGCCCTGGGCTTGGTCACTTaGGCAGGTGGCTGGAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPPRFVCRYGDTNSNPHALGLVT*AGGWKG Trigger: TCCTTTCCAGCCACCTGCCAAAGTGACCAAGCCCAG...GGCATGGGGATTGGAGTTTGTGTCCCCATACCTACATACAAATCTGGGTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CAA 90 bp | CCCCAGAAGCAGAGTGTAAAAAGAATCCCTTCATGGGCTGGTGAGATGGCTCAGGGTGGCTTGCTGCTTTaGGGAGGCCCTTTAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQKQSVKRIPSWAGEMAQGGLLL*GGPLAE Trigger: CTCAGCTAAAGGGCCTCCCAAAAGCAGCAAGCCACC...CTGAGCCATCTCACCAGCCCATGAAGGGATTCTTTTTACACTCTGCTTCTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CAA 90 bp | GAAGGTACACTGTCTGCTGGGCACTGGAAAACTGAGCACAACATGGCCTTACTATACGGCCAGGAGACTTaGAAGAGCCAGGTCCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EGTLSAGHWKTEHNMALLYGQET*KSQVPD Trigger: ATCCGGGACCTGGCTCTTCAAAGTCTCCTGGCCGTA...TAGTAAGGCCATGTTGTGCTCAGTTTTCCAGTGCCCAGCAGACAGTGTACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CCA 90 bp | GCAGTCTTGGCTGACTTCGAGACAGTTTCTGTCTTGGTAGCAGATTaGGGAACAGTCACAATAGACAGCGGGGTACGGCCAGGAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: AVLADFETVSVLVAD*GTVTIDSGVRPGDF Trigger: AAAGTCTCCTGGCCGTACCCCGCTGTCTATTGTGACTGTTCCCCAATCTGCTACCAAGACAGAAACTGTCTCGAAGTCAGCCAAGACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS GCA 90 bp | GTCACTTTGGCAGGTGGCTGGAAAGGAGAAGGGTTAGGCCTTCCGTaGATGGCTCCTTTAGGTAGCTTTGGGGACTTGGATGATAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VTLAGGWKGEGLGLP*MAPLGSFGDLDDKF Trigger: AAACTTATCATCCAAGTCCCCAAAGCTACCTAAAGGAGCCATGCACGGAAGGCCTAACCCTTCTCCTTTCCAGCCACCTGCCAAAGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CAA 90 bp | TCATCCATCGGCTCCTCTCGCCAGCCAGCTTGTCCCAGGAAATCCTGTCTCTTCTTCAAAGATGTCACCTaGGGATGTGGAAATGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSIGSSRQPACPRKSCLFFKDVT*GCGNDA Trigger: AGCATCATTTCCACATCCCAAGGTGACATCTTTGAA...GAAGAGACAGGATTTCCTGGGACAAGCTGGCTGGCGAGAGGAGCCGATGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CAA 90 bp | GGCCCTCTCTATGAGGGAATAGCCTCTCTAAAGCTACAATCCTTCCTCTCTGAAAAGGAAGTTGGTGGCTaGCTGCTTTTGGGAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPLYEGIASLKLQSFLSEKEVGG*LLLGGP Trigger: AGGGCCTCCCAAAAGCAGCAAGCCACCAACTTCCTT...TTCAGAGAGGAAGGATTGTAGCTTTAGAGAGGCTATTCCCTCATAGAGAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS TCA 90 bp | CCTAGCCGGTACCGCCCTTCGGATAAGTATTCAATAGAAAACCGATaGGAGCAGCTACAAGGAGGGTCCTCCGCAATGTGTTTAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSRYRPSDKYSIENR*EQLQGGSSAMCLTA Trigger: AGCTGTTAAACACATTGCGGAGGACCCTCCTTGTAGCTGCTCTCATCGGTTTTCTATTGAATACTTATCCGAAGGGCGGTACCGGCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| CDS-3UTR CAA 90 bp | CTTCGGAGCTGGGATTACAGGCACACACTAGCGCCAAGCAAACCATTGCTTTGTTTGGTCTGTGCAGTCTaGGGGAAGGTGACACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRSWDYRHTLAPSKPLLCLVCAV*GKVTHF Trigger: AAAATGTGTCACCTTCCCCAAGACTGCACAGACCAA...ACAAAGCAATGGTTTGCTTGGCGCTAGTGTGTGCCTGTAATCCCAGCTCCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CAA 90 bp | AGCCCACCCAGATTTGTATGTAGGTATGGGGACACAAACTCCAATCCCCATGCCGAGACAGTTTCTGTCTaGGTAGCAGATTGGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: SPPRFVCRYGDTNSNPHAETVSV*VADWGT Trigger: TGTTCCCCAATCTGCTACCAAGACAGAAACTGTCTC...GGCATGGGGATTGGAGTTTGTGTCCCCATACCTACATACAAATCTGGGTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CAA 90 bp | ATCTTGACTTCATGTCTGCAGCTCTCCGGACAGACACAAATAGGAAGATCTTTGGGTGGCTTGCTGCTTTaGGGAGGCCCTTTAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILTSCLQLSGQTQIGRSLGGLLL*GGPLAE Trigger: CTCAGCTAAAGGGCCTCCCAAAAGCAGCAAGCCACC...CAAAGATCTTCCTATTTGTGTCTGTCCGGAGAGCTGCAGACATGAAGTCAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS-3UTR CAA 90 bp | GGACAGACACAAATAGGAAGATCTTTGGTGATCCTTGTGGCTCGCCATTCATTGAAGGAAGTTGGTGGCTaGCTGCTTTTGGGAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GQTQIGRSLVILVARHSLKEVGG*LLLGGP Trigger: AGGGCCTCCCAAAAGCAGCAAGCCACCAACTTCCTT...CAATGAATGGCGAGCCACAAGGATCACCAAAGATCTTCCTATTTGTGTCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS TCA 90 bp | GACCCTGAGCACACAGAAGCTGGACTGTTTAAATTCAATGTAGACTaGAGTCTTTGTGCTGAGACTGCTCCTGACCTCGGCGTTCTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DPEHTEAGLFKFNVD*SLCAETAPDLGVLV Trigger: CACTAGAACGCCGAGGTCAGGAGCAGTCTCAGCACAAAGACTTCAGTCTACATTGAATTTAAACAGTCCAGCTTCTGTGTGCTCAGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS GCA 90 bp | ATGTCAACACCTAGTAAGCCAGATAACCAAATAGAGAGATCTTCCTaGATAGGCAGCAGGGTGGCTTCATGTCTCACGGCTATCCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: MSTPSKPDNQIERSS*IGSRVASCLTAIHS Trigger: CGAGTGGATAGCCGTGAGACATGAAGCCACCCTGCTGCCTATGCAGGAAGATCTCTCTATTTGGTTATCTGGCTTACTAGGTGTTGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 ENSMUST00000220234.2 |
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| CDS-3UTR CAA 90 bp | AAACTCACACATTTGTCCATTGATACACAAAATGCATGGGTCCTTTCCCTGACCTACGGCCAGGAGACTTaGAAGAGCCAGGTCCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLTHLSIDTQNAWVLSLTYGQET*KSQVPD Trigger: ATCCGGGACCTGGCTCTTCAAAGTCTCCTGGCCGTA...GGTCAGGGAAAGGACCCATGCATTTTGTGTATCAATGGACAAATGTGTGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS TCA 90 bp | CTGGCTCGTCAGAGTGGCAGCCTTTCACCATGTTCTGAAGAACATTaGTTAGCTGACACAACAGCACTCCATTATCGAGCTCTTCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LARQSGSLSPCSEEH*LADTTALHYRALPI Trigger: TATTGGAAGAGCTCGATAATGGAGTGCTGTTGTGTCAGCTAATCAATGTTCTTCAGAACATGGTGAAAGGCTGCCACTCTGACGAGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 ENSMUST00000220234.2 |
||
| CDS-3UTR CAA 90 bp | ATCCAGAATAATATCAAAGTAAACAGCAGGAGCCATTGGTACTTAGGATTGCTGCTGGGCTTGGTCACTTaGGCAGGTGGCTGGAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IQNNIKVNSRSHWYLGLLLGLVT*AGGWKG Trigger: TCCTTTCCAGCCACCTGCCAAAGTGACCAAGCCCAG...CAGCAATCCTAAGTACCAATGGCTCCTGCTGTTTACTTTGATATTATTCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CAA 90 bp | CTTAGGATTGCTGGACCAGGATTCCTGACCAATAAATTAGGTGCCTATTACAGCGAGACAGTTTCTGTCTaGGTAGCAGATTGGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LRIAGPGFLTNKLGAYYSETVSV*VADWGT Trigger: TGTTCCCCAATCTGCTACCAAGACAGAAACTGTCTC...GCTGTAATAGGCACCTAATTTATTGGTCAGGAATCCTGGTCCAGCAATCCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CAA 90 bp | GCTGTCATGAAATCATTGGATATTCCTGACGAGAATCTGCCTACAGAACAGAAGTTGGTCTGTGCAGTCTaGGGGAAGGTGACACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: AVMKSLDIPDENLPTEQKLVCAV*GKVTHF Trigger: AAAATGTGTCACCTTCCCCAAGACTGCACAGACCAA...CTTCTGTTCTGTAGGCAGATTCTCGTCAGGAATATCCAATGATTTCATGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CAA 90 bp | ATCTTGACTTCATGTCTGCAGCTCTCCGGACAGACACAAATAGGAAGATCTTTGTTCAAAGATGTCACCTaGGGATGTGGAAATGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILTSCLQLSGQTQIGRSLFKDVT*GCGNDA Trigger: AGCATCATTTCCACATCCCAAGGTGACATCTTTGAA...CAAAGATCTTCCTATTTGTGTCTGTCCGGAGAGCTGCAGACATGAAGTCAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
||
| CDS-3UTR CAA 90 bp | CTGATTACAGAAATGCCCCTGGCATCTCTTTTGAGTGCTAAGAGGTGCTTTCAATGTGTTTCAAATGCTTaGGTTCCATTTTTCCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LITEMPLASLLSAKRCFQCVSNA*VPFFQE Trigger: CTCCTGGAAAAATGGAACCAAAGCATTTGAAACACA...TTGAAAGCACCTCTTAGCACTCAAAAGAGATGCCAGGGGCATTTCTGTAATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CAA 90 bp | GCCCCCTTACCAGATGAGGGTGGGTCCCTGAAGGAAGTTGGTGGCTaGCTGCTTTTGGGAGGCCCTTTAGCTGAGTACTGGCCCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: APLPDEGGSLKEVGG*LLLGGPLAEYWPFM Trigger: CATGAAGGGCCAGTACTCAGCTAAAGGGCCTCCCAAAAGCAGCAAGCCACCAACTTCCTTCAGGGACCCACCCTCATCTGGTAAGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS TCA 72 bp | AGTCACAATAGACAGCGGGGTACGGCCAGGAGACTTTaGAGAGCCAGGTCCCGGATTCCGGCAGACACCCTT | + |
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Preference number: 6 (lower is better) Translates to: SHNRQRGTARRL*RARSRIPADTL Trigger: AAGGGTGTCTGCCGGAATCCGGGACCTGGCTCTTCAAAGTCTCCTGGCCGTACCCCGCTGTCTATTGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CCA 72 bp | GTGGCTTCATGTCTCACGGCTATCCACTCGTCATACTaGCAAACGTCAGCCAGTCCCGGGCCATGTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: VASCLTAIHSSY*QTSASPGPCLG Trigger: TCCCAGACATGGCCCGGGACTGGCTGACGTTTGCCAGTATGACGAGTGGATAGCCGTGAGACATGAAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000218764.2 ENSMUST00000220071.2 ENSMUST00000220128.2 ENSMUST00000220234.2 |
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| CDS CAA 90 bp | CCAGATGAGGGTGGGTCCCTGAAGGAAGTTGGTGGCTTGCTGCTTTaGGGAGGCCCTTTAGCTGAGTACTGGCCCTTCATGGCAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: PDEGGSLKEVGGLLL*GGPLAEYWPFMAVL Trigger: CAAGACTGCCATGAAGGGCCAGTACTCAGCTAAAGGGCCTCCCAAAAGCAGCAAGCCACCAACTTCCTTCAGGGACCCACCCTCATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS TCA 72 bp | GAGACTGCTCCTGACCTCGGCGTTCTAGTGGGTGGCTaGGACTGTGTCCCTAGACCTATGGCTCCGGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: ETAPDLGVLVGG*DCVPRPMAPVL Trigger: TAAAACCGGAGCCATAGGTCTAGGGACACAGTCTCAGCCACCCACTAGAACGCCGAGGTCAGGAGCAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CAA 72 bp | GGTGGGTCCCTGAAGGAAGTTGGTGGCTTGCTGCTTTaGGGAGGCCCTTTAGCTGAGTACTGGCCCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: GGSLKEVGGLLL*GGPLAEYWPFM Trigger: CATGAAGGGCCAGTACTCAGCTAAAGGGCCTCCCAAAAGCAGCAAGCCACCAACTTCCTTCAGGGACCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CAA 90 bp | GTCCCTAGACCTATGGCTCCGGTTTTAGAACTGGGCTTGGTCACTTaGGCAGGTGGCTGGAAAGGAGAAGGGTTAGGCCTTCCGTGCATG | + |
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Preference number: 6 (lower is better) Translates to: VPRPMAPVLELGLVT*AGGWKGEGLGLPCM Trigger: CATGCACGGAAGGCCTAACCCTTCTCCTTTCCAGCCACCTGCCAAAGTGACCAAGCCCAGTTCTAAAACCGGAGCCATAGGTCTAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS GCA 72 bp | GCAGGTGGCTGGAAAGGAGAAGGGTTAGGCCTTCCGTaGATGGCTCCTTTAGGTAGCTTTGGGGACTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: AGGWKGEGLGLP*MAPLGSFGDLD Trigger: ATCCAAGTCCCCAAAGCTACCTAAAGGAGCCATGCACGGAAGGCCTAACCCTTCTCCTTTCCAGCCACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CAA 72 bp | GTCCCTAGACCTATGGCTCCGGTTTTAGAACTGGGCTaGGTCACTTTGGCAGGTGGCTGGAAAGGAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: VPRPMAPVLELG*VTLAGGWKGEG Trigger: CCCTTCTCCTTTCCAGCCACCTGCCAAAGTGACCAAGCCCAGTTCTAAAACCGGAGCCATAGGTCTAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CCA 72 bp | GGCACACTGTGCAGTGCTTGGTTTAGACCCTGGATTTaGAGAAGCCAGGGACTGCGATACACTGTTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GTLCSAWFRPWI*RSQGLRYTVGR Trigger: CCTTCCAACAGTGTATCGCAGTCCCTGGCTTCTCCAAATCCAGGGTCTAAACCAAGCACTGCACAGTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CCA 72 bp | TCCGGTTTTAGAACTGGGCTTGGTCACTTTGGCAGGTaGCTGGAAAGGAGAAGGGTTAGGCCTTCCGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: SGFRTGLGHFGR*LERRRVRPSVH Trigger: ATGCACGGAAGGCCTAACCCTTCTCCTTTCCAGCCACCTGCCAAAGTGACCAAGCCCAGTTCTAAAACCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CCA 72 bp | GCTGACTTCGAGACAGTTTCTGTCTTGGTAGCAGATTaGGGAACAGTCACAATAGACAGCGGGGTACGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ADFETVSVLVAD*GTVTIDSGVRP Trigger: TGGCCGTACCCCGCTGTCTATTGTGACTGTTCCCCAATCTGCTACCAAGACAGAAACTGTCTCGAAGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CAA 72 bp | GGCCCTTTAGCTGAGTACTGGCCCTTCATGGCAGTCTaGGCTGACTTCGAGACAGTTTCTGTCTTGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: GPLAEYWPFMAV*ADFETVSVLVA Trigger: TGCTACCAAGACAGAAACTGTCTCGAAGTCAGCCAAGACTGCCATGAAGGGCCAGTACTCAGCTAAAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CAA 90 bp | CTTTTGGGAGGCCCTTTAGCTGAGTACTGGCCCTTCATGGCAGTCTaGGCTGACTTCGAGACAGTTTCTGTCTTGGTAGCAGATTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LLGGPLAEYWPFMAV*ADFETVSVLVADWG Trigger: TCCCCAATCTGCTACCAAGACAGAAACTGTCTCGAAGTCAGCCAAGACTGCCATGAAGGGCCAGTACTCAGCTAAAGGGCCTCCCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS TCA 72 bp | TGCGTCCTTCAAAGATGTCACCTTGGGATGTGGAAATaGTGCTGGAGAATCTGGCCGTTTAGCCCGGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: CVLQRCHLGMWK*CWRIWPFSPGR Trigger: TCTACCCGGGCTAAACGGCCAGATTCTCCAGCATCATTTCCACATCCCAAGGTGACATCTTTGAAGGACGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CCA 72 bp | GTCGGCACCAGTGAAGAAAGTTGGCGGTGTTGTCTCTaGCAAAGAATGAGCCCGAAGCAGCATCTTTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: VGTSEESWRCCL*QRMSPKQHLSY Trigger: GTAAGAAAGATGCTGCTTCGGGCTCATTCTTTGCCAGAGACAACACCGCCAACTTTCTTCACTGGTGCCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 ENSMUST00000220234.2 |
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| CDS CAA 72 bp | CCGAAGCAGCATCTTTCTTACAAGGCACCTTTCTCATaGGAAAGTTCCCTGGCTCGTCAGAGTGGCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PKQHLSYKAPFS*ESSLARQSGSL Trigger: AAGGCTGCCACTCTGACGAGCCAGGGAACTTTCCAATGAGAAAGGTGCCTTGTAAGAAAGATGCTGCTTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 ENSMUST00000220234.2 |
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| CDS CAA 90 bp | AGAATGAGCCCGAAGCAGCATCTTTCTTACAAGGCACCTTTCTCATaGGAAAGTTCCCTGGCTCGTCAGAGTGGCAGCCTTTCACCATGT | + |
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Preference number: 6 (lower is better) Translates to: RMSPKQHLSYKAPFS*ESSLARQSGSLSPC Trigger: ACATGGTGAAAGGCTGCCACTCTGACGAGCCAGGGAACTTTCCAATGAGAAAGGTGCCTTGTAAGAAAGATGCTGCTTCGGGCTCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 ENSMUST00000220234.2 |
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| CDS TCA 72 bp | GAGCCAGGTCCCGGATTCCGGCAGACACCCTTACTCTaGGGTTGCTTTTTGGCAACTGAAACTGTATTCTTA | + |
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Preference number: 6 (lower is better) Translates to: EPGPGFRQTPLL*GCFLATETVFL Trigger: TAAGAATACAGTTTCAGTTGCCAAAAAGCAACCTCAGAGTAAGGGTGTCTGCCGGAATCCGGGACCTGGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CAA 90 bp | AGTCTGGACTTAGACAGATCTCTTGAATTCTGGGCTGGAATAGCCTaGGTCTGTGCAGTCTTGGGGAAGGTGACACATTTTCGCGATGAC | + |
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Preference number: 6 (lower is better) Translates to: SLDLDRSLEFWAGIA*VCAVLGKVTHFRDD Trigger: GTCATCGCGAAAATGTGTCACCTTCCCCAAGACTGCACAGACCAAGGCTATTCCAGCCCAGAATTCAAGAGATCTGTCTAAGTCCAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS TCA 72 bp | TACCGCCCTTCGGATAAGTATTCAATAGAAAACCGATaGGAGCAGCTACAAGGAGGGTCCTCCGCAATGTGT | + |
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Preference number: 6 (lower is better) Translates to: YRPSDKYSIENR*EQLQGGSSAMC Trigger: ACACATTGCGGAGGACCCTCCTTGTAGCTGCTCTCATCGGTTTTCTATTGAATACTTATCCGAAGGGCGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| CDS CCA 72 bp | TTTCTTACAAGGCACCTTTCTCATTGGAAAGTTCCCTaGCTCGTCAGAGTGGCAGCCTTTCACCATGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: FLTRHLSHWKVP*LVRVAAFHHVL Trigger: CAGAACATGGTGAAAGGCTGCCACTCTGACGAGCCAGGGAACTTTCCAATGAGAAAGGTGCCTTGTAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 ENSMUST00000220234.2 |
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| CDS CCA 72 bp | CATTTCTGGAGGCTGAGGCGTTCTGGCAGGCGAATCTaGCACGCTTTCATTAGAAACTCCTTTTTGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: HFWRLRRSGRRI*HAFIRNSFLKC Trigger: GCATTTCAAAAAGGAGTTTCTAATGAAAGCGTGCCAGATTCGCCTGCCAGAACGCCTCAGCCTCCAGAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 |
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| CDS TCA 72 bp | CACACAGAAGCTGGACTGTTTAAATTCAATGTAGACTaGAGTCTTTGTGCTGAGACTGCTCCTGACCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: HTEAGLFKFNVD*SLCAETAPDLG Trigger: GCCGAGGTCAGGAGCAGTCTCAGCACAAAGACTTCAGTCTACATTGAATTTAAACAGTCCAGCTTCTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS TCA 72 bp | CAGAGTGGCAGCCTTTCACCATGTTCTGAAGAACATTaGTTAGCTGACACAACAGCACTCCATTATCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: QSGSLSPCSEEH*LADTTALHYRA Trigger: AGCTCGATAATGGAGTGCTGTTGTGTCAGCTAATCAATGTTCTTCAGAACATGGTGAAAGGCTGCCACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 ENSMUST00000220234.2 |
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| CDS CCA 72 bp | GATTCCGGCAGACACCCTTACTCTGAGGTTGCTTTTTaGCAACTGAAACTGTATTCTTACCTTTCGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: DSGRHPYSEVAF*QLKLYSYLSIP Trigger: AGGGATCGAAAGGTAAGAATACAGTTTCAGTTGCCAAAAAGCAACCTCAGAGTAAGGGTGTCTGCCGGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CAA 72 bp | TTAGACAGATCTCTTGAATTCTGGGCTGGAATAGCCTaGGTCTGTGCAGTCTTGGGGAAGGTGACACATTTT | + |
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Preference number: 6 (lower is better) Translates to: LDRSLEFWAGIA*VCAVLGKVTHF Trigger: AAAATGTGTCACCTTCCCCAAGACTGCACAGACCAAGGCTATTCCAGCCCAGAATTCAAGAGATCTGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 |
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| CDS CAA 72 bp | ACTCCATTATCGAGCTCTTCCAATAATCTTTCTGCCTaGATGTCAACACTTGGATTGCAGGCTGCATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TPLSSSSNNLSA*MSTLGLQAAWS Trigger: TGACCATGCAGCCTGCAATCCAAGTGTTGACATCAAGGCAGAAAGATTATTGGAAGAGCTCGATAATGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219351.2 |
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| CDS CCA 72 bp | TCCGACCAATCTCAAGAAGACAAAGGTACACCTGTCTaGGATCTTTATGTAAAACTAAACCTTCCGACTCAA | + |
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Preference number: 6 (lower is better) Translates to: SDQSQEDKGTPV*DLYVKLNLPTQ Trigger: TTGAGTCGGAAGGTTTAGTTTTACATAAAGATCCCAGACAGGTGTACCTTTGTCTTCTTGAGATTGGTCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 ENSMUST00000220234.2 |
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| CDS CAA 72 bp | ACTCCATTATCGAGCTCTTCCAATAATCTTTCTGCCTaGATGTCAACACCTAGTAAGCCAGATAACCAAATA | + |
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Preference number: 6 (lower is better) Translates to: TPLSSSSNNLSA*MSTPSKPDNQI Trigger: TATTTGGTTATCTGGCTTACTAGGTGTTGACATCAAGGCAGAAAGATTATTGGAAGAGCTCGATAATGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099374.9 ENSMUST00000105298.3 ENSMUST00000220128.2 ENSMUST00000220234.2 |
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