Pregenerated sensors for GAS2L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020686Ensembl transcript IDs: ENSMUST00000052521.9, ENSMUST00000147301.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACTGAGCTGTGGGGAGGCACCCTGGTGCAGGACCCAGATCATGTaGGGACTGGCTAGGCTGGAGGAACGAGGTGGGGGCGATGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: SLSCGEAPWCRTQIM*GLARLEERGGGDGP Trigger: GGGACCATCGCCCCCACCTCGTTCCTCCAGCCTAGCCAGTCCTCACATGATCTGGGTCCTGCACCAGGGTGCCTCCCCACAGCTCAGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR GCA 90 bp | GAGCGGCTGATGGTCATTGTAGGCTGGGGTTGTGAGGGCCCATCCTaGACCTTCACTTCGTGCTGCACCGGTGGTCCTGGGGGCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: ERLMVIVGWGCEGPS*TFTSCCTGGPGGFR Trigger: CCTGAAGCCCCCAGGACCACCGGTGCAGCACGAAGTGAAGGTGCAGGATGGGCCCTCACAACCCCAGCCTACAATGACCATCAGCCGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR GCA 90 bp | GTGGGAGCCTCCAGGTTGGCAGATACAGGCGGGGTTGAGCACCCCTaGCCTCTTGCAGGTGATACAGTCCTCACTGTGGTATCCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: VGASRLADTGGVEHP*PLAGDTVLTVVSSA Trigger: TGCTGAGGATACCACAGTGAGGACTGTATCACCTGCAAGAGGGCAGGGGTGCTCAACCCCGCCTGTATCTGCCAACCTGGAGGCTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | TTGGGACCTTGGGAGTGGATCCTCTCTGAGGGTTCTGGCCCTCACTaGGGGTTCACTACGGAGTCCAGGAGAGGAAGGTGTGGGAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: LGPWEWILSEGSGPH*GFTTESRRGRCGRS Trigger: AGACCTCCCACACCTTCCTCTCCTGGACTCCGTAGTGAACCCCCAGTGAGGGCCAGAACCCTCAGAGAGGATCCACTCCCAAGGTCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | TCCTCCTCGGGTGAAAGTGGGGTTCCACCAAGCTTCAGAGGCTCCTaGCTCTCTGCGGGCTGGATGCTGCTCTCCAAGGAGATGTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSSGESGVPPSFRGS*LSAGWMLLSKEMLL Trigger: CAGCAACATCTCCTTGGAGAGCAGCATCCAGCCCGCAGAGAGCCAGGAGCCTCTGAAGCTTGGTGGAACCCCACTTTCACCCGAGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | TGCTGGTGGCCTCAGGGATTTGGAGCCTCTGTGGTGTGGGGGCCTTaGTGTGTGTTCCTCGACTGCCTGCTTCCTTGTGAACCCACAATG | + |
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Preference number: 1 (lower is better) Translates to: CWWPQGFGASVVWGP*CVFLDCLLPCEPTM Trigger: CATTGTGGGTTCACAAGGAAGCAGGCAGTCGAGGAACACACACCAAGGCCCCCACACCACAGAGGCTCCAAATCCCTGAGGCCACCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR TCA 90 bp | GAGATGGAGTTGGTTTCTCTTGGGACCTTGGGAGTGGATCCTCTCTaGGGGTTCTGGCCCTCACTGGGGGTTCACTACGGAGTCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: EMELVSLGTLGVDPL*GFWPSLGVHYGVQE Trigger: CTCCTGGACTCCGTAGTGAACCCCCAGTGAGGGCCAGAACCCTCAGAGAGGATCCACTCCCAAGGTCCCAAGAGAAACCAACTCCATCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | ACGTCCTTTTGCTGGTGGCCTCAGGGATTTGGAGCCTCTGTGGTGTaGGGGCCTTGGTGTGTGTTCCTCGACTGCCTGCTTCCTTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: TSFCWWPQGFGASVV*GPWCVFLDCLLPCE Trigger: TTCACAAGGAAGCAGGCAGTCGAGGAACACACACCAAGGCCCCCACACCACAGAGGCTCCAAATCCCTGAGGCCACCAGCAAAAGGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | TGGTGTGTGTTCCTCGACTGCCTGCTTCCTTGTGAACCCACAATGTaGGAGTCCTTCCTCTGGGCGGTTCACCTGGGCATCTGTTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: WCVFLDCLLPCEPTM*ESFLWAVHLGICLL Trigger: GAGCAAACAGATGCCCAGGTGAACCGCCCAGAGGAAGGACTCCCACATTGTGGGTTCACAAGGAAGCAGGCAGTCGAGGAACACACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | CTGTCTGGTGGTCCCCACTTGCTTCCACAGAGTGATGCCCATGTGTaGATCTATCCAGGTTCCCTTCGAGGGCCCTTGATGAGATGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LSGGPHLLPQSDAHV*IYPGSLRGPLMRWS Trigger: GCTCCATCTCATCAAGGGCCCTCGAAGGGAACCTGGATAGATCCACACATGGGCATCACTCTGTGGAAGCAAGTGGGGACCACCAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | TCTGGGGCTTCCGGAGAGTTCTCTTGCCCTTGCCCAGACATACACTaGCTTTGTCAGAACTGGGGTCTGAGCATGAACGTGTGGGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: SGASGEFSCPCPDIH*LCQNWGLSMNVWEP Trigger: AGGCTCCCACACGTTCATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGCCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR TCA 90 bp | GTAGTCTGGATGTCTGTCTGGTGGTCCCCACTTGCTTCCACAGAGTaGTGCCCATGTGTGGATCTATCCAGGTTCCCTTCGAGGGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: VVWMSVWWSPLASTE*CPCVDLSRFPSRAL Trigger: AAGGGCCCTCGAAGGGAACCTGGATAGATCCACACATGGGCATCACTCTGTGGAAGCAAGTGGGGACCACCAGACAGACATCCAGACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | TCTACGAGGCCGGATTCTGGGTCTCAGCTTCAGCTTGTAAATGGATaGGATCTTCTGGGGCTTCCGGAGAGTTCTCTTGCCCTTGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: STRPDSGSQLQLVNG*DLLGLPESSLALAQ Trigger: CTGGGCAAGGGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCCCATCCATTTACAAGCTGAAGCTGAGACCCAGAATCCGGCCTCGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | GGTCTCTACGAGGCCGGATTCTGGGTCTCAGCTTCAGCTTGTAAATaGATGGGATCTTCTGGGGCTTCCGGAGAGTTCTCTTGCCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: GLYEAGFWVSASACK*MGSSGASGEFSCPC Trigger: GCAAGGGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCCCATCCATTTACAAGCTGAAGCTGAGACCCAGAATCCGGCCTCGTAGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | GGGTTGAGCACCCCTGCCCTCTTGCAGGTGATACAGTCCTCACTGTaGTATCCTCAGCATTCAGGCTTGCCTTTATCCTTGTCCCCGTTT | + |
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Preference number: 1 (lower is better) Translates to: GLSTPALLQVIQSSL*YPQHSGLPLSLSPF Trigger: AAACGGGGACAAGGATAAAGGCAAGCCTGAATGCTGAGGATACCACAGTGAGGACTGTATCACCTGCAAGAGGGCAGGGGTGCTCAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | GAGTTCTCTTGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACTaGGGTCTGAGCATGAACGTGTGGGAGCCTCCAGGTTGGCAGATA | + |
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Preference number: 1 (lower is better) Translates to: EFSCPCPDIHWLCQN*GLSMNVWEPPGWQI Trigger: TATCTGCCAACCTGGAGGCTCCCACACGTTCATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR TCA 90 bp | CTCTTTCCACTTCTGTGTACCCAAGCTCCTGGGATCCTCAGTCTCTaGAGTAGTCTGGATGTCTGTCTGGTGGTCCCCACTTGCTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: LFPLLCTQAPGILSL*SSLDVCLVVPTCFH Trigger: GTGGAAGCAAGTGGGGACCACCAGACAGACATCCAGACTACTTCAGAGACTGAGGATCCCAGGAGCTTGGGTACACAGAAGTGGAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR GCA 90 bp | AAATGGATGGGATCTTCTGGGGCTTCCGGAGAGTTCTCTTGCCCTTaGCCAGACATACACTGGCTTTGTCAGAACTGGGGTCTGAGCATG | + |
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Preference number: 1 (lower is better) Translates to: KWMGSSGASGEFSCP*PDIHWLCQNWGLSM Trigger: CATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCCCATCCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR GCA 90 bp | GCTTGTAAATGGATGGGATCTTCTGGGGCTTCCGGAGAGTTCTCTTaGCCTTGCCCAGACATACACTGGCTTTGTCAGAACTGGGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: ACKWMGSSGASGEFS*PCPDIHWLCQNWGL Trigger: CAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCCCATCCATTTACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CCA 90 bp | TTCAGATCCAACCTTCCAGGCTTTCAGATCCACTTTAAGGAGGGGTaGGGGACCCTGAACCAGTTCCCGGATGACTTTATCATAAGGACC | + |
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Preference number: 1 (lower is better) Translates to: FRSNLPGFQIHFKEG*GTLNQFPDDFIIRT Trigger: GGTCCTTATGATAAAGTCATCCGGGAACTGGTTCAGGGTCCCCCACCCCTCCTTAAAGTGGATCTGAAAGCCTGGAAGGTTGGATCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR GCA 90 bp | GTTATCATAGAGGGCTTGCTCTCTGCGCCTGCCCAGGGCCAAAGAGGTGTGTCTGGGGCTTCAGGAAGCTaGCTGGCTTGTGGGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VIIEGLLSAPAQGQRGVSGASGS*LACGRG Trigger: CCCTCTCCCACAAGCCAGGCAGCTTCCTGAAGCCCC...AGACACACCTCTTTGGCCCTGGGCAGGCGCAGAGAGCAAGCCCTCTATGATAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGTCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTCTCAGGAGGACTGGCTAGGCTaGAGGAACGAGGTGGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: GRSLLRSMVSTRPDSGSQEDWLG*RNEVGA Trigger: CGCCCCCACCTCGTTCCTCCAGCCTAGCCAGTCCTC...CTGAGACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGACCTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTATTCACCTTCAGTACCCAAAGAGCTTCTTCCTGGAGTTGGGGGCCGGGCTGTAGGCTGGGGTTGTaGGGGCCCATCCTGCACCTT | + |
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Preference number: 2 (lower is better) Translates to: GVFTFSTQRASSWSWGPGCRLGL*GPILHL Trigger: AAGGTGCAGGATGGGCCCTCACAACCCCAGCCTACA...GCCCGGCCCCCAACTCCAGGAAGAAGCTCTTTGGGTACTGAAGGTGAATACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTCCTCCTTCTTACCTGTTCCATTCACCTGGCAGGGGACCCCTCCCTTGCTGTGGGAGAGGGACGTaGACCGGCAGGGGTCATGTT | + |
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Preference number: 2 (lower is better) Translates to: SLPPSYLFHSPGRGPLPCCGRGT*TGRGHV Trigger: AACATGACCCCTGCCGGTGCACGTCCCTCTCCCACA...GCAAGGGAGGGGTCCCCTGCCAGGTGAATGGAACAGGTAAGAAGGAGGAAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTCCTCCTTCTTACCTGTTCCATTCACCTGGCAGGGGACCCCTCCCTTGCTTCGTGCTGCACCGGTaGTCCTGGGGGCTTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SLPPSYLFHSPGRGPLPCFVLHR*SWGLQE Trigger: TTCCTGAAGCCCCCAGGACCACCGGTGCAGCACGAA...GCAAGGGAGGGGTCCCCTGCCAGGTGAATGGAACAGGTAAGAAGGAGGAAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CAA 90 bp | GGCTTCCGGAGAGTTCTCTTGCCCTTGCCCAGACATACACTGGCTTaGTCAGAACTGGGGTCTGAGCATGAACGTGTGGGAGCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GFRRVLLPLPRHTLA*SELGSEHERVGASR Trigger: CCTGGAGGCTCCCACACGTTCATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACTGGGGTCTGAGCATGAACTGCACCGGTGGTCCTaGGGGCTTCAGGAAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LPLPRHTLALSELGSEHELHRWS*GLQEAA Trigger: GGCAGCTTCCTGAAGCCCCCAGGACCACCGGTGCAG...TTCATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACTGGGGTCTGAGCATGAAGGAGTGGATCCTCTCTaGGGGTTCTGGCCCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: LPLPRHTLALSELGSEHEGVDPL*GFWPSL Trigger: CAGTGAGGGCCAGAACCCTCAGAGAGGATCCACTCC...TTCATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGAGGCTCCTGGCTCTCTGCGGGCTGGATGCTGCTCTCCAAGGAGATGTTGAACCAGTTCCCGGATaGCTTTATCATAAGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: LQRLLALCGLDAALQGDVEPVPG*LYHKDP Trigger: GGGGTCCTTATGATAAAGTCATCCGGGAACTGGTTC...AACATCTCCTTGGAGAGCAGCATCCAGCCCGCAGAGAGCCAGGAGCCTCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR GCA 90 bp | CACAATTGGCCTAGGAAGGCATTCAGATCCAACCTTCCAGGCTTTCAGATCCACAGAGGGCTTGCTCTCTaGGCCTGCCCAGGGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: HNWPRKAFRSNLPGFQIHRGLAL*ACPGPK Trigger: CTTTGGCCCTGGGCAGGCGCAGAGAGCAAGCCCTCT...GTGGATCTGAAAGCCTGGAAGGTTGGATCTGAATGCCTTCCTAGGCCAATTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTGTAAATGGATGGGATCTTCTGGGGCTTCCGGAGAGTTCTCTTGCCCTTACACGCACCATCACGTaGCTCCGGAGGATCCGGATG | + |
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Preference number: 2 (lower is better) Translates to: QLVNGWDLLGLPESSLALTRTIT*LRRIRM Trigger: CATCCGGATCCTCCGGAGCCACGTGATGGTGCGTGT...AAGGGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCCCATCCATTTACAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCGGAGAGTTCTCTTGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACCTTCAGGAAGCTGCCTaGCTTGTGGGAGAGGGACGT | + |
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Preference number: 2 (lower is better) Translates to: ASGEFSCPCPDIHWLCQNLQEAA*LVGEGR Trigger: ACGTCCCTCTCCCACAAGCCAGGCAGCTTCCTGAAG...GTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCGGAGAGTTCTCTTGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACGATTTGGAGCCTCTGTaGTGTGGGGGCCTTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: ASGEFSCPCPDIHWLCQNDLEPL*CGGLGV Trigger: CACACCAAGGCCCCCACACCACAGAGGCTCCAAATC...GTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGTCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTCTCAGCCTCTTTGGGGCTTCCTaGGTCCACAATTGGCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: EGLFSGLWSLRGRILGLSLFGAS*VHNWPR Trigger: CCTAGGCCAATTGTGGACCCAGGAAGCCCCAAAGAG...GCTGAGACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGACCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CAA 90 bp | AGTGATGCCCATGTGTGGATCTATCCAGGTTCCCTTCGAGGGCCCTaGATGAGATGGAGCCTCTCCCCGTGGAGTATTCACCTTCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: SDAHVWIYPGSLRGP*MRWSLSPWSIHLQY Trigger: GTACTGAAGGTGAATACTCCACGGGGAGAGGCTCCATCTCATCAAGGGCCCTCGAAGGGAACCTGGATAGATCCACACATGGGCATCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGTCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTCTCAGCCAGGGGATGAGGAATaGACAGTCATGGGTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: GRSLLRSMVSTRPDSGSQPGDEE*TVMGSL Trigger: CAGTGAACCCATGACTGTTCATTCCTCATCCCCTGG...CTGAGACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGACCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGTCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTCTCAGCACCTGGGCATCTGTTTaGTCTCTTCCCAGACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: EGLFSGLWSLRGRILGLSTWASV*SLPRQG Trigger: ACCCTGTCTGGGAAGAGAGCAAACAGATGCCCAGGT...GCTGAGACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCATCTGTTTGCTCTCTTCCCAGACAGGGTACTCTGTAGGTCTGGCCCCCTACCTCTGAGATGGAGTTaGTTTCTCTTGGGACCTTGG | + |
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Preference number: 2 (lower is better) Translates to: GHLFALFPDRVLCRSGPLPLRWS*FLLGPW Trigger: CCAAGGTCCCAAGAGAAACCAACTCCATCTCAGAGG...TAGGGGGCCAGACCTACAGAGTACCCTGTCTGGGAAGAGAGCAAACAGATGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGTCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTCTCAGGAGTTCTCTTGCCCTTaGCCAGACATACACTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GRSLLRSMVSTRPDSGSQEFSCP*PDIHWL Trigger: AAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTC...CTGAGACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGACCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | GTTATCATAGAGGGCTTGCTCTCTGCGCCTGCCCAGGGCCAAAGAGGTGTGTCTAGTGATGCCCATGTGTaGATCTATCCAGGTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: VIIEGLLSAPAQGQRGVSSDAHV*IYPGSL Trigger: AAGGGAACCTGGATAGATCCACACATGGGCATCACT...AGACACACCTCTTTGGCCCTGGGCAGGCGCAGAGAGCAAGCCCTCTATGATAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CAA 90 bp | CAGTCCTCACTGTGGTATCCTCAGCATTCAGGCTTGCCTTTATCCTaGTCCCCGTTTCTCTGGAACCTAGCTTCTCTTTGGGGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: QSSLWYPQHSGLPLS*SPFLWNLASLWGFL Trigger: CAGGAAGCCCCAAAGAGAAGCTAGGTTCCAGAGAAACGGGGACAAGGATAAAGGCAAGCCTGAATGCTGAGGATACCACAGTGAGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAACATAGACCCCACTTCGAGGGATGGCTTGAGACCTTGTACCCTGAGTGTATGTGTGTTCCTCGACTaGCTGCTTCCTTGTGAACCC | + |
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Preference number: 2 (lower is better) Translates to: RNIDPTSRDGLRPCTLSVCVFLD*LLPCEP Trigger: GGGTTCACAAGGAAGCAGGCAGTCGAGGAACACACA...TACACTCAGGGTACAAGGTCTCAAGCCATCCCTCGAAGTGGGGTCTATGTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | TACAGTCCTCACTGTGGTATCCTCAGCATTCAGGCTTGCCTTTATCCTTGTCCCACGTCCTTTTGCTGGTaGCCTCAGGGATTTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: YSPHCGILSIQACLYPCPTSFCW*PQGFGA Trigger: GGCTCCAAATCCCTGAGGCCACCAGCAAAAGGACGT...GGGACAAGGATAAAGGCAAGCCTGAATGCTGAGGATACCACAGTGAGGACTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCCCAGACATACACTGGCTTTGTCAGAACTGGGGTCTGAGCATGAACGTGTCCTGGGTCCACAATTaGCCTAGGAAGGCATTCAGA | + |
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Preference number: 2 (lower is better) Translates to: PCPDIHWLCQNWGLSMNVSWVHN*PRKAFR Trigger: TCTGAATGCCTTCCTAGGCCAATTGTGGACCCAGGA...CACGTTCATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR CAA 90 bp | CTTGCCTTTATCCTTGTCCCCGTTTCTCTGGAACCTAGCTTCTCTTaGGGGCTTCCTGGGTCCACAATTGGCCTAGGAAGGCATTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LAFILVPVSLEPSFS*GLPGSTIGLGRHSD Trigger: ATCTGAATGCCTTCCTAGGCCAATTGTGGACCCAGGAAGCCCCAAAGAGAAGCTAGGTTCCAGAGAAACGGGGACAAGGATAAAGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGGAAGGTCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTTTTCTCTTGGGACCTTaGGAGTGGATCCTCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: ILEGLFSGLWSLRGRILGFLLGP*EWILSE Trigger: CTCAGAGAGGATCCACTCCCAAGGTCCCAAGAGAAA...ACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGACCTTCCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACTGGGGTCTGAGCATGAAAACCTAGCTTCTCTTTaGGGCTTCCTGGGTCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: LPLPRHTLALSELGSEHENLASL*GFLGPQ Trigger: TTGTGGACCCAGGAAGCCCCAAAGAGAAGCTAGGTT...TTCATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTCAGGCTTGCCTTTATCCTTGTCCCCGTTTCTCTGGAACCTAGCTTCTCTTCTTGCTTCCACAGAGTaGTGCCCATGTGTGGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: HSGLPLSLSPFLWNLASLLASTE*CPCVDL Trigger: TAGATCCACACATGGGCATCACTCTGTGGAAGCAAG...AAGAGAAGCTAGGTTCCAGAGAAACGGGGACAAGGATAAAGGCAAGCCTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGTGTACCCAAGCTCCTGGGATCCTCAGTCTCTGAAGTAGTCTGGATGTCTCAAGTAGATGAGAATTaGGGACCAGGTGATGACATC | + |
|
Preference number: 2 (lower is better) Translates to: FCVPKLLGSSVSEVVWMSQVDEN*GPGDDI Trigger: GATGTCATCACCTGGTCCCCAATTCTCATCTACTTG...AGACATCCAGACTACTTCAGAGACTGAGGATCCCAGGAGCTTGGGTACACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | CTGCACCGGTGGTCCTGGGGGCTTCAGGAAGCTGCCTaGCTTGTGGGAGAGGGACGTGCACCGGCAGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LHRWSWGLQEAA*LVGEGRAPAGV Trigger: GACCCCTGCCGGTGCACGTCCCTCTCCCACAAGCCAGGCAGCTTCCTGAAGCCCCCAGGACCACCGGTGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR GCA 72 bp | GGTTGTGAGGGCCCATCCTGCACCTTCACTTCGTGCTaGACCGGTGGTCCTGGGGGCTTCAGGAAGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GCEGPSCTFTSC*TGGPGGFRKLP Trigger: AGGCAGCTTCCTGAAGCCCCCAGGACCACCGGTGCAGCACGAAGTGAAGGTGCAGGATGGGCCCTCACAACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR GCA 72 bp | TGGGGTTGTGAGGGCCCATCCTGCACCTTCACTTCGTaGTGCACCGGTGGTCCTGGGGGCTTCAGGAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WGCEGPSCTFTS*CTGGPGGFRKL Trigger: CAGCTTCCTGAAGCCCCCAGGACCACCGGTGCAGCACGAAGTGAAGGTGCAGGATGGGCCCTCACAACCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | AGGCACCCTGGTGCAGGACCCAGATCATGTGAGGACTaGCTAGGCTGGAGGAACGAGGTGGGGGCGATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RHPGAGPRSCED*LGWRNEVGAMV Trigger: GACCATCGCCCCCACCTCGTTCCTCCAGCCTAGCCAGTCCTCACATGATCTGGGTCCTGCACCAGGGTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR GCA 72 bp | ATGGTCATTGTAGGCTGGGGTTGTGAGGGCCCATCCTaGACCTTCACTTCGTGCTGCACCGGTGGTCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: MVIVGWGCEGPS*TFTSCCTGGPG Trigger: CCCAGGACCACCGGTGCAGCACGAAGTGAAGGTGCAGGATGGGCCCTCACAACCCCAGCCTACAATGACCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | CCTTTTGCTGGTGGCCTCAGGGATTTGGAGCCTCTGTaGTGTGGGGGCCTTGGTGTGTGTTCCTCGACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PFAGGLRDLEPL*CGGLGVCSSTA Trigger: GGCAGTCGAGGAACACACACCAAGGCCCCCACACCACAGAGGCTCCAAATCCCTGAGGCCACCAGCAAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTCCTCCTTCTTACCTGTTCCATTCACCTGGCAGGGGACCCCTCCCTTGCGGTGGCCTCAGGGATTaGGAGCCTCTGTGGTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLPPSYLFHSPGRGPLPCGGLRD*EPLWCG Trigger: CCCACACCACAGAGGCTCCAAATCCCTGAGGCCACC...GCAAGGGAGGGGTCCCCTGCCAGGTGAATGGAACAGGTAAGAAGGAGGAAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGAGGCTCCTGGCTCTCTGCGGGCTGGATGCTGCTCTCCAAGGAGATGTTTCCCTTCGAGGGCCCTaGATGAGATGGAGCCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LQRLLALCGLDAALQGDVSLRGP*MRWSLS Trigger: GGAGAGGCTCCATCTCATCAAGGGCCCTCGAAGGGA...AACATCTCCTTGGAGAGCAGCATCCAGCCCGCAGAGAGCCAGGAGCCTCTGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR GCA 72 bp | TGGGGTTCCACCAAGCTTCAGAGGCTCCTGGCTCTCTaGGGGCTGGATGCTGCTCTCCAAGGAGATGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: WGSTKLQRLLAL*GLDAALQGDVA Trigger: AGCAACATCTCCTTGGAGAGCAGCATCCAGCCCGCAGAGAGCCAGGAGCCTCTGAAGCTTGGTGGAACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCGGAGAGTTCTCTTGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACAGCTTCTTCCTGGAGTaGGGGGCCGGGCAGGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: ASGEFSCPCPDIHWLCQNSFFLE*GAGQGT Trigger: TGTCCCCTGCCCGGCCCCCAACTCCAGGAAGAAGCT...GTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGATTTGGAGCCTCTGTGGTGTGGGGGCCTTGGTGTGTGTTCCTCGACTGCCTTGGAGTTGGTTTCTCTaGGGACCTTGGGAGTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: GIWSLCGVGALVCVPRLPWSWFL*GPWEWI Trigger: GATCCACTCCCAAGGTCCCAAGAGAAACCAACTCCA...AGGCAGTCGAGGAACACACACCAAGGCCCCCACACCACAGAGGCTCCAAATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGTCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTCTCAGCTGTGGTGTGGGGGCCTaGGTGTGTGTTCCTCGACTG | + |
|
Preference number: 3 (lower is better) Translates to: EGLFSGLWSLRGRILGLSCGVGA*VCVPRL Trigger: CAGTCGAGGAACACACACCAAGGCCCCCACACCACA...GCTGAGACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGACCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR GCA 72 bp | TCCAGGTTGGCAGATACAGGCGGGGTTGAGCACCCCTaGCCTCTTGCAGGTGATACAGTCCTCACTGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SRLADTGGVEHP*PLAGDTVLTVV Trigger: TACCACAGTGAGGACTGTATCACCTGCAAGAGGGCAGGGGTGCTCAACCCCGCCTGTATCTGCCAACCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR GCA 72 bp | CAAGCTTCAGAGGCTCCTGGCTCTCTGCGGGCTGGATaGTGCTCTCCAAGGAGATGTTGCTGCCTCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QASEAPGSLRAG*CSPRRCCCLLS Trigger: AGAAAGGAGGCAGCAACATCTCCTTGGAGAGCAGCATCCAGCCCGCAGAGAGCCAGGAGCCTCTGAAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | CTGGGGGTTCACTACGGAGTCCAGGAGAGGAAGGTGTaGGAGGTCTCAGCTTTCGGCTGGAAGAGGTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: LGVHYGVQERKV*EVSAFGWKRCM Trigger: CATACACCTCTTCCAGCCGAAAGCTGAGACCTCCCACACCTTCCTCTCCTGGACTCCGTAGTGAACCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | CTGAGATGGAGTTGGTTTCTCTTGGGACCTTGGGAGTaGATCCTCTCTGAGGGTTCTGGCCCTCACTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRWSWFLLGPWE*ILSEGSGPHWG Trigger: CCCCCAGTGAGGGCCAGAACCCTCAGAGAGGATCCACTCCCAAGGTCCCAAGAGAAACCAACTCCATCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | CTTGCTGACGTCCTTTTGCTGGTGGCCTCAGGGATTTaGAGCCTCTGTGGTGTGGGGGCCTTGGTGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LADVLLLVASGI*SLCGVGALVCV Trigger: AACACACACCAAGGCCCCCACACCACAGAGGCTCCAAATCCCTGAGGCCACCAGCAAAAGGACGTCAGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGAGGCTCCTGGCTCTCTGCGGGCTGGATGCTGCTCTCCAAGGAGATGTTTTCCGGAGAGTTCTCTaGCCCTTGCCCAGACATACA | + |
|
Preference number: 3 (lower is better) Translates to: LQRLLALCGLDAALQGDVFRRVL*PLPRHT Trigger: TGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAA...AACATCTCCTTGGAGAGCAGCATCCAGCCCGCAGAGAGCCAGGAGCCTCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | CAGGAGAGGAAGGTGTGGGAGGTCTCAGCTTTCGGCTaGAAGAGGTGTATGTCTTCCAGTCCACTGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QERKVWEVSAFG*KRCMSSSPLEA Trigger: TGCCTCCAGTGGACTGGAAGACATACACCTCTTCCAGCCGAAAGCTGAGACCTCCCACACCTTCCTCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | CCACAATGTGGGAGTCCTTCCTCTGGGCGGTTCACCTaGGCATCTGTTTGCTCTCTTCCCAGACAGGGTACT | + |
|
Preference number: 3 (lower is better) Translates to: PQCGSPSSGRFT*ASVCSLPRQGT Trigger: AGTACCCTGTCTGGGAAGAGAGCAAACAGATGCCCAGGTGAACCGCCCAGAGGAAGGACTCCCACATTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | GGTCCCCACTTGCTTCCACAGAGTGATGCCCATGTGTaGATCTATCCAGGTTCCCTTCGAGGGCCCTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: GPHLLPQSDAHV*IYPGSLRGPLM Trigger: CATCAAGGGCCCTCGAAGGGAACCTGGATAGATCCACACATGGGCATCACTCTGTGGAAGCAAGTGGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | TGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACTaGGGTCTGAGCATGAACGTGTGGGAGCCTCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CPCPDIHWLCQN*GLSMNVWEPPG Trigger: ACCTGGAGGCTCCCACACGTTCATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR GCA 72 bp | GGATCTTCTGGGGCTTCCGGAGAGTTCTCTTGCCCTTaGCCAGACATACACTGGCTTTGTCAGAACTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GSSGASGEFSCP*PDIHWLCQNWG Trigger: ACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | CATCCTCTGAGATGGAGTTGGTTTCTCTTGGGACCTTaGGAGTGGATCCTCTCTGAGGGTTCTGGCCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: HPLRWSWFLLGP*EWILSEGSGPH Trigger: GTGAGGGCCAGAACCCTCAGAGAGGATCCACTCCCAAGGTCCCAAGAGAAACCAACTCCATCTCAGAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR TCA 72 bp | ATGTCTGTCTGGTGGTCCCCACTTGCTTCCACAGAGTaGTGCCCATGTGTGGATCTATCCAGGTTCCCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: MSVWWSPLASTE*CPCVDLSRFPS Trigger: CGAAGGGAACCTGGATAGATCCACACATGGGCATCACTCTGTGGAAGCAAGTGGGGACCACCAGACAGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR GCA 72 bp | TGGATGGGATCTTCTGGGGCTTCCGGAGAGTTCTCTTaGCCTTGCCCAGACATACACTGGCTTTGTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: WMGSSGASGEFS*PCPDIHWLCQN Trigger: GTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCCCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | CTTCGAGGGCCCTTGATGAGATGGAGCCTCTCCCCGTaGAGTATTCACCTTCAGTACCCAAAGAGCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LRGPLMRWSLSP*SIHLQYPKSFF Trigger: GAAGAAGCTCTTTGGGTACTGAAGGTGAATACTCCACGGGGAGAGGCTCCATCTCATCAAGGGCCCTCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | CCGGATTCTGGGTCTCAGCTTCAGCTTGTAAATGGATaGGATCTTCTGGGGCTTCCGGAGAGTTCTCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PDSGSQLQLVNG*DLLGLPESSLA Trigger: GGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCCCATCCATTTACAAGCTGAAGCTGAGACCCAGAATCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGTCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTCTCAGATGAAGATGAGAGTGTaGGAGTCCCCCACTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GRSLLRSMVSTRPDSGSQMKMRV*ESPTLY Trigger: GTACAGAGTGGGGGACTCCAACACTCTCATCTTCAT...CTGAGACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGACCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CCA 72 bp | AACCTTCCAGGCTTTCAGATCCACTTTAAGGAGGGGTaGGGGACCCTGAACCAGTTCCCGGATGACTTTATC | + |
|
Preference number: 3 (lower is better) Translates to: NLPGFQIHFKEG*GTLNQFPDDFI Trigger: GATAAAGTCATCCGGGAACTGGTTCAGGGTCCCCCACCCCTCCTTAAAGTGGATCTGAAAGCCTGGAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACTGGGGTCTGAGCATGAATCCTCTGAGATGGAGTaGGTTTCTCTTGGGACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LPLPRHTLALSELGSEHESSEME*VSLGTL Trigger: CAAGGTCCCAAGAGAAACCAACTCCATCTCAGAGGA...TTCATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR TCA 72 bp | GTAGATGAGAATTGGGGACCAGGTGATGACATCCTCTaGGATGGAGTTGGTTTCTCTTGGGACCTTGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: VDENWGPGDDIL*DGVGFSWDLGS Trigger: ACTCCCAAGGTCCCAAGAGAAACCAACTCCATCTCAGAGGATGTCATCACCTGGTCCCCAATTCTCATCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGACGTGCACCGGCAGGGGTCATGTTTATCCAGATAATGGCCCAGCGTCCAGAGCAGCCTCCGTaGCAGTGTTGGCATGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEGRAPAGVMFIQIMAQRPEQPP*QCWHAG Trigger: GCCGGCATGCCAACACTGTCACGGAGGCTGCTCTGG...ACGCTGGGCCATTATCTGGATAAACATGACCCCTGCCGGTGCACGTCCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTCTCAGGCGCACAGGAGGTCCTaGGGTCCTGGGTCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRSLLRSMVSTRPDSGSQAHRRS*GPGSPP Trigger: GGGAGGAGACCCAGGACCCCAGGACCTCCTGTGCGC...CTGAGACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGACCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTCATTGTAGGCTGGGGTTGTGAGGGCCCATCCTGCACCTTCACTTCGTGCATTTCCTCTTCCAGATaGACCAGGGCGGGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: MVIVGWGCEGPSCTFTSCISSSR*TRAGAA Trigger: GGCGGCGCCCGCCCTGGTGCATCTGGAAGAGGAAAT...GCACGAAGTGAAGGTGCAGGATGGGCCCTCACAACCCCAGCCTACAATGACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CCA 90 bp | ACACGCACCATCACGTGGCTCCGGAGGATCCGGATGAAGATGAGAGTGTTGGAGGAGGTCCTGGGGTCCTaGGTCTCCTCCCATGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRTITWLRRIRMKMRVLEEVLGS*VSSHVP Trigger: TGGGACATGGGAGGAGACCCAGGACCCCAGGACCTC...CTCCAACACTCTCATCTTCATCCGGATCCTCCGGAGCCACGTGATGGTGCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGACGTGCACCGGCAGGGGTCATGTTTATCCAGATAATGGCCCAGCGTGGCATGTGCAATGGCTaGCGAGGCTCTGCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GEGRAPAGVMFIQIMAQRGMCNG*RGSAPS Trigger: AGATGGTGCAGAGCCTCGTCAGCCATTGCACATGCC...ACGCTGGGCCATTATCTGGATAAACATGACCCCTGCCGGTGCACGTCCCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGAGGCTCCTGGCTCTCTGCGGGCTGGATGCTGCTCTCCAAGGAGATGTTGCTGAGCAGCCCCATTaGAGAAAACTCCAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQRLLALCGLDAALQGDVAEQPH*RKLQPG Trigger: CCCAGGCTGGAGTTTTCTGCAATGGGGCTGCTCAGC...AACATCTCCTTGGAGAGCAGCATCCAGCCCGCAGAGAGCCAGGAGCCTCTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CCA 90 bp | GATTTGGAGCCTCTGTGGTGTGGGGGCCTTGGTGTGTGTTCCTCGACTGCCTGCCTCCAGCCTGGGGCATaGGAATCTTTTGAGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLEPLWCGGLGVCSSTACLQPGA*ESFELA Trigger: AGCGAGCTCAAAAGATTCCCATGCCCCAGGCTGGAG...GCAGGCAGTCGAGGAACACACACCAAGGCCCCCACACCACAGAGGCTCCAAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CCA 90 bp | AGGGATTTGGAGCCTCTGTGGTGTGGGGGCCTTGGTGTGTGTTCCTCGACTGCCAGGCTCTGCACCATCTaGTCCAGGTTGTGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLEPLWCGGLGVCSSTARLCTI*SRLWKW Trigger: CCACTTCCACAACCTGGACCAGATGGTGCAGAGCCT...GGCAGTCGAGGAACACACACCAAGGCCCCCACACCACAGAGGCTCCAAATCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCCTCCTTCTTACCTGTTCCATTCACCTGGCAGGGGACCCCTCCCTTGCCCAGGTCTTCCTTCATaGCCTCCAGGTACTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPPSYLFHSPGRGPLPCPGLPS*PPGTAR Trigger: GCGAGCAGTACCTGGAGGCCATGAAGGAAGACCTGG...GCAAGGGAGGGGTCCCCTGCCAGGTGAATGGAACAGGTAAGAAGGAGGAAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CAA 72 bp | TGGCAGATACAGGCGGGGTTGAGCACCCCTGCCCTCTaGCAGGTGATACAGTCCTCACTGTGGTATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WQIQAGLSTPAL*QVIQSSLWYPQ Trigger: CTGAGGATACCACAGTGAGGACTGTATCACCTGCAAGAGGGCAGGGGTGCTCAACCCCGCCTGTATCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCCTCCTTCTTACCTGTTCCATTCACCTGGCAGGGGACCCCTCCCTTGCCCGCAGGAAGTTGTCTaGATCGATGTCCAGCCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLPPSYLFHSPGRGPLPCPQEVV*IDVQPV Trigger: TACGGGCTGGACATCGATGCAGACAACTTCCTGCGG...GCAAGGGAGGGGTCCCCTGCCAGGTGAATGGAACAGGTAAGAAGGAGGAAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGTCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTCTCAGTGGAGATGTTGTCCCTaGCCTGGAAGGTACCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRSLLRSMVSTRPDSGSQWRCCP*PGRYPA Trigger: AGCCGGGTACCTTCCAGGCCAGGGACAACATCTCCA...CTGAGACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGACCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CAA 72 bp | GGCCACAACCTCCTCTTTAAGGTTATCATAGAGGGCTaGCTCTCTGCGCCTGCCCAGGGCCAAAGAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHNLLFKVIIEG*LSAPAQGQRGV Trigger: CACACCTCTTTGGCCCTGGGCAGGCGCAGAGAGCAAGCCCTCTATGATAACCTTAAAGAGGAGGTTGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CAA 72 bp | CAGGCTAGGAACATAGACCCCACTTCGAGGGATGGCTaGAGACCTTGTACCCTGAGTGTAGGCAGTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QARNIDPTSRDG*RPCTLSVGSPH Trigger: GTGGGGACTGCCTACACTCAGGGTACAAGGTCTCAAGCCATCCCTCGAAGTGGGGTCTATGTTCCTAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CAA 72 bp | GGGATCTTCTGGGGCTTCCGGAGAGTTCTCTTGCCCTaGCCCAGACATACACTGGCTTTGTCAGAACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GIFWGFRRVLLP*PRHTLALSELG Trigger: CCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR GCA 90 bp | AACATAGACCCCACTTCGAGGGATGGCTTGAGACCTTGTACCCTGAGTGTAGGCATGGCCTCCAGGTACTaGTCGCTGGACTTGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NIDPTSRDGLRPCTLSVGMASRY*SLDLKG Trigger: GCCCTTCAAGTCCAGCGAGCAGTACCTGGAGGCCAT...GCCTACACTCAGGGTACAAGGTCTCAAGCCATCCCTCGAAGTGGGGTCTATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR GCA 90 bp | AGGAACATAGACCCCACTTCGAGGGATGGCTTGAGACCTTGTACCCTGAGTGTATTGAGCTCGCTCAGGTaGCTCAGCCAGGAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNIDPTSRDGLRPCTLSVLSSLR*LSQEGQ Trigger: CTGGCCTTCCTGGCTGAGGCACCTGAGCGAGCTCAA...TACACTCAGGGTACAAGGTCTCAAGCCATCCCTCGAAGTGGGGTCTATGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCTCAGGTCTATGGTCTCTACGAGGCCGGATTCTGGGTCTCAGCTTCAGACTGGGCATGTGCAATaGCTGACGAGGCTCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLLRSMVSTRPDSGSQLQTGHVQ*LTRLCT Trigger: GGTGCAGAGCCTCGTCAGCCATTGCACATGCCCAGT...CTGAAGCTGAGACCCAGAATCCGGCCTCGTAGAGACCATAGACCTGAGAAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CAA 72 bp | CATGTGTGGATCTATCCAGGTTCCCTTCGAGGGCCCTaGATGAGATGGAGCCTCTCCCCGTGGAGTATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HVWIYPGSLRGP*MRWSLSPWSIH Trigger: GTGAATACTCCACGGGGAGAGGCTCCATCTCATCAAGGGCCCTCGAAGGGAACCTGGATAGATCCACACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCCGGAGAGTTCTCTTGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACCGCTCTTCACGTTCTTaGGGAGCACTAGGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASGEFSCPCPDIHWLCQNRSSRS*GALGPL Trigger: CAGAGGACCTAGTGCTCCGCAAGAACGTGAAGAGCG...GTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CAA 72 bp | ATCCTTGTCCCCGTTTCTCTGGAACCTAGCTTCTCTTaGGGGCTTCCTGGGTCCACAATTGGCCTAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILVPVSLEPSFS*GLPGSTIGLGR Trigger: CCTTCCTAGGCCAATTGTGGACCCAGGAAGCCCCAAAGAGAAGCTAGGTTCCAGAGAAACGGGGACAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR TCA 90 bp | AGGAACATAGACCCCACTTCGAGGGATGGCTTGAGACCTTGTACCCTGAGTGTAGGCATGGGAATCTTTTaGGCTCGCTCAGGTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNIDPTSRDGLRPCTLSVGMGIF*ARSGAS Trigger: TGAGGCACCTGAGCGAGCTCAAAAGATTCCCATGCC...TACACTCAGGGTACAAGGTCTCAAGCCATCCCTCGAAGTGGGGTCTATGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR TCA 90 bp | CACAATTGGCCTAGGAAGGCATTCAGATCCAACCTTCCAGGCTTTCAGATCCACTGGAAGGTACCCGGCTaGGCAGCCCCATTGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HNWPRKAFRSNLPGFQIHWKVPG*AAPLQK Trigger: TTTCTGCAATGGGGCTGCTCAGCCGGGTACCTTCCA...GTGGATCTGAAAGCCTGGAAGGTTGGATCTGAATGCCTTCCTAGGCCAATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR GCA 90 bp | CACAATTGGCCTAGGAAGGCATTCAGATCCAACCTTCCAGGCTTTCAGATCCACTGGCTGACGAGGCTCTaGACCATCTGGTCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HNWPRKAFRSNLPGFQIHWLTRL*TIWSRL Trigger: CAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCA...GTGGATCTGAAAGCCTGGAAGGTTGGATCTGAATGCCTTCCTAGGCCAATTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CAA 72 bp | ATTGGGGACCAGGTGATGACATCCTCTGAGATGGAGTaGGTTTCTCTTGGGACCTTGGGAGTGGATCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IGDQVMTSSEME*VSLGTLGVDPL Trigger: GAGAGGATCCACTCCCAAGGTCCCAAGAGAAACCAACTCCATCTCAGAGGATGTCATCACCTGGTCCCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CAA 72 bp | ATGGATGGGATCTTCTGGGGCTTCCGGAGAGTTCTCTaGCCCTTGCCCAGACATACACTGGCTTTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MDGIFWGFRRVL*PLPRHTLALSE Trigger: TTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCCCATCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGCCCAGACATACACTGGCTTTGTCAGAACTGGGGTCTGAGCATGAACGTGTTGACCATGGAGAATTaGACTGGGCATGTGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PCPDIHWLCQNWGLSMNVLTMEN*TGHVQW Trigger: CCATTGCACATGCCCAGTGCAATTCTCCATGGTCAA...CACGTTCATGCTCAGACCCCAGTTCTGACAAAGCCAGTGTATGTCTGGGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR TCA 90 bp | CATTCAGGCTTGCCTTTATCCTTGTCCCCGTTTCTCTGGAACCTAGCTTCTCTTTGCGACACCACTGGATaGAGTTGGAGATGTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSGLPLSLSPFLWNLASLCDTTG*SWRCCP Trigger: GGGACAACATCTCCAACTTCATCCAGTGGTGTCGCA...AAGAGAAGCTAGGTTCCAGAGAAACGGGGACAAGGATAAAGGCAAGCCTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| 3UTR CAA 72 bp | CTGTGGTATCCTCAGCATTCAGGCTTGCCTTTATCCTaGTCCCCGTTTCTCTGGAACCTAGCTTCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWYPQHSGLPLS*SPFLWNLASLW Trigger: CCAAAGAGAAGCTAGGTTCCAGAGAAACGGGGACAAGGATAAAGGCAAGCCTGAATGCTGAGGATACCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CCA 90 bp | CATTCAGGCTTGCCTTTATCCTTGTCCCCGTTTCTCTGGAACCTAGCTTCTCTTCATGGAGAATTGCACTaGGCATGTGCAATGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSGLPLSLSPFLWNLASLHGELH*ACAMAD Trigger: GTCAGCCATTGCACATGCCCAGTGCAATTCTCCATG...AAGAGAAGCTAGGTTCCAGAGAAACGGGGACAAGGATAAAGGCAAGCCTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS CCA 90 bp | GCAAGGCCTGCGGGCAGGGGGTATGGGCGGTGGTGGGTCGGGCGATaGCAAGGCCAGGTCGCGCCGCAGCTCCTCATCAATTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARPAGRGYGRWWVGR*QGQVAPQLLINFLF Trigger: GAAGAGGAAATTGATGAGGAGCTGCGGCGCGACCTGGCCTTGCCATCGCCCGACCCACCACCGCCCATACCCCCTGCCCGCAGGCCTTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052521.9 |
||
| CDS GCA 90 bp | GCCTCAGCCAGGAAGGCCAGAGCAGCCTCCGTGACAGTGTTGGCATaGCGGCACAACACCAGGCCAGTCTCCAGCACCCGCAGGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASARKARAASVTVLA*RHNTRPVSSTRRKL Trigger: CAACTTCCTGCGGGTGCTGGAGACTGGCCTGGTGTTGTGCCGGCATGCCAACACTGTCACGGAGGCTGCTCTGGCCTTCCTGGCTGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
||
| CDS CCA 90 bp | CATGTGCAATGGCTGACGAGGCTCTGCACCATCTGGTCCAGGTTGTaGAAGTGGCAAGGCCTGCGGGCAGGGGGTATGGGCGGTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HVQWLTRLCTIWSRL*KWQGLRAGGMGGGG Trigger: CCCACCACCGCCCATACCCCCTGCCCGCAGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052521.9 |
||
| CDS GCA 90 bp | CCGGCACAACACCAGGCCAGTCTCCAGCACCCGCAGGAAGTTGTCTaGATCGATGTCCAGCCCGTACAGATCCCGAAGCCACTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAQHQASLQHPQEVV*IDVQPVQIPKPLSQ Trigger: CTGGCTGAGTGGCTTCGGGATCTGTACGGGCTGGACATCGATGCAGACAACTTCCTGCGGGTGCTGGAGACTGGCCTGGTGTTGTGCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
||
| CDS CCA 90 bp | AATTGCACTGGGCATGTGCAATGGCTGACGAGGCTCTGCACCATCTaGTCCAGGTTGTGGAAGTGGCAAGGCCAGGTCGCGCCGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NCTGHVQWLTRLCTI*SRLWKWQGQVAPQL Trigger: GAGCTGCGGCGCGACCTGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATGCCCAGTGCAATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS CCA 90 bp | AATTGCACTGGGCATGTGCAATGGCTGACGAGGCTCTGCACCATCTaGTCCAGGTTGTGGAAGTGGCAAGGCCTGCGGGCAGGGGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: NCTGHVQWLTRLCTI*SRLWKWQGLRAGGM Trigger: CATACCCCCTGCCCGCAGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATGCCCAGTGCAATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052521.9 |
||
| CDS GCA 90 bp | ACCATGGAGAATTGCACTGGGCATGTGCAATGGCTGACGAGGCTCTaGACCATCTGGTCCAGGTTGTGGAAGTGGCAAGGCCTGCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TMENCTGHVQWLTRL*TIWSRLWKWQGLRA Trigger: TGCCCGCAGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATGCCCAGTGCAATTCTCCATGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052521.9 |
||
| CDS GCA 90 bp | ACCATGGAGAATTGCACTGGGCATGTGCAATGGCTGACGAGGCTCTaGACCATCTGGTCCAGGTTGTGGAAGTGGCAAGGCCAGGTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: TMENCTGHVQWLTRL*TIWSRLWKWQGQVA Trigger: CGCGACCTGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATGCCCAGTGCAATTCTCCATGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS CCA 90 bp | CAATGGCTGACGAGGCTCTGCACCATCTGGTCCAGGTTGTGGAAGTaGCAAGGCCAGGTCGCGCCGCAGCTCCTCATCAATTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QWLTRLCTIWSRLWK*QGQVAPQLLINFLF Trigger: GAAGAGGAAATTGATGAGGAGCTGCGGCGCGACCTGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS CCA 90 bp | CATGTGCAATGGCTGACGAGGCTCTGCACCATCTGGTCCAGGTTGTaGAAGTGGCAAGGCCAGGTCGCGCCGCAGCTCCTCATCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: HVQWLTRLCTIWSRL*KWQGQVAPQLLINF Trigger: GAAATTGATGAGGAGCTGCGGCGCGACCTGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS TCA 90 bp | ACATCAGCACCTCTTGGATCCCCATCTCCTTGCGACACCACTGGATaGAGTTGGAGATGTTGTCCCTGGCCTGGAAGGTACCCGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSAPLGSPSPCDTTG*SWRCCPWPGRYPAE Trigger: CTCAGCCGGGTACCTTCCAGGCCAGGGACAACATCTCCAACTTCATCCAGTGGTGTCGCAAGGAGATGGGGATCCAAGAGGTGCTGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
||
| CDS CCA 90 bp | TCGAACATCAGCACCTCTTGGATCCCCATCTCCTTGCGACACCACTaGATGAAGTTGGAGATGTTGTCCCTGGCCTGGAAGGTACCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SNISTSWIPISLRHH*MKLEMLSLAWKVPG Trigger: GCCGGGTACCTTCCAGGCCAGGGACAACATCTCCAACTTCATCCAGTGGTGTCGCAAGGAGATGGGGATCCAAGAGGTGCTGATGTTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTTGTAAATGGATGGGATCTTCTGGGGCTTCCGGAGAGTTCTCTTGCCCTTTACTGCTCGCTGGACTaGAAGGGCCGGATGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLVNGWDLLGLPESSLALYCSLD*KGRMLR Trigger: GCGCAGCATCCGGCCCTTCAAGTCCAGCGAGCAGTA...AAGGGCAAGAGAACTCTCCGGAAGCCCCAGAAGATCCCATCCATTTACAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CAA 90 bp | GTTATCATAGAGGGCTTGCTCTCTGCGCCTGCCCAGGGCCAAAGAGGTGTGTCTTGGATCCCCATCTCCTaGCGACACCACTGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VIIEGLLSAPAQGQRGVSWIPIS*RHHWMK Trigger: CTTCATCCAGTGGTGTCGCAAGGAGATGGGGATCCA...AGACACACCTCTTTGGCCCTGGGCAGGCGCAGAGAGCAAGCCCTCTATGATAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCCGGAGAGTTCTCTTGCCCTTGCCCAGACATACACTGGCTTTGTCAGAACAGCACCCGCAGGAAGTaGTCTGCATCGATGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASGEFSCPCPDIHWLCQNSTRRK*SASMSS Trigger: GCTGGACATCGATGCAGACAACTTCCTGCGGGTGCT...GTTCTGACAAAGCCAGTGTATGTCTGGGCAAGGGCAAGAGAACTCTCCGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CAA 90 bp | AACATAGACCCCACTTCGAGGGATGGCTTGAGACCTTGTACCCTGAGTGTAGGCCACCACTGGATGAAGTaGGAGATGTTGTCCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NIDPTSRDGLRPCTLSVGHHWMK*EMLSLA Trigger: GGCCAGGGACAACATCTCCAACTTCATCCAGTGGTG...GCCTACACTCAGGGTACAAGGTCTCAAGCCATCCCTCGAAGTGGGGTCTATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CAA 90 bp | CACAATTGGCCTAGGAAGGCATTCAGATCCAACCTTCCAGGCTTTCAGATCCACGGGCATGGGAATCTTTaGAGCTCGCTCAGGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HNWPRKAFRSNLPGFQIHGHGNL*SSLRCL Trigger: GAGGCACCTGAGCGAGCTCAAAAGATTCCCATGCCC...GTGGATCTGAAAGCCTGGAAGGTTGGATCTGAATGCCTTCCTAGGCCAATTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CAA 90 bp | AGGAACATAGACCCCACTTCGAGGGATGGCTTGAGACCTTGTACCCTGAGTGTAGAACATCAGCACCTCTaGGATCCCCATCTCCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RNIDPTSRDGLRPCTLSVEHQHL*DPHLLA Trigger: CGCAAGGAGATGGGGATCCAAGAGGTGCTGATGTTC...TACACTCAGGGTACAAGGTCTCAAGCCATCCCTCGAAGTGGGGTCTATGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTTGCCTTTATCCTTGTCCCCGTTTCTCTGGAACCTAGCTTCTCTTTGGGGACGCTCTTCACGTTCTaGCGGAGCACTAGGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLAFILVPVSLEPSFSLGTLFTF*RSTRSS Trigger: AGAGGACCTAGTGCTCCGCAAGAACGTGAAGAGCGT...CCCCAAAGAGAAGCTAGGTTCCAGAGAAACGGGGACAAGGATAAAGGCAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CAA 90 bp | CACAATTGGCCTAGGAAGGCATTCAGATCCAACCTTCCAGGCTTTCAGATCCACACCATCTGGTCCAGGTaGTGGAAGTGGCAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HNWPRKAFRSNLPGFQIHTIWSR*WKWQGQ Trigger: CTGGCCTTGCCACTTCCACAACCTGGACCAGATGGT...GTGGATCTGAAAGCCTGGAAGGTTGGATCTGAATGCCTTCCTAGGCCAATTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS-3UTR CAA 90 bp | TACAGTCCTCACTGTGGTATCCTCAGCATTCAGGCTTGCCTTTATCCTTGTCCCCTTGACCATGGAGAATaGCACTGGGCATGTGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: YSPHCGILSIQACLYPCPLDHGE*HWACAM Trigger: CATTGCACATGCCCAGTGCAATTCTCCATGGTCAAG...GGGACAAGGATAAAGGCAAGCCTGAATGCTGAGGATACCACAGTGAGGACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS CCA 72 bp | GTGGCAAGGCCTGCGGGCAGGGGGTATGGGCGGTGGTaGGTCGGGCGATGGCAAGGCCAGGTCGCGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VARPAGRGYGRW*VGRWQGQVAPQ Trigger: CTGCGGCGCGACCTGGCCTTGCCATCGCCCGACCCACCACCGCCCATACCCCCTGCCCGCAGGCCTTGCCAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052521.9 |
||
| CDS GCA 72 bp | AGGAAGGCCAGAGCAGCCTCCGTGACAGTGTTGGCATaGCGGCACAACACCAGGCCAGTCTCCAGCACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RKARAASVTVLA*RHNTRPVSSTR Trigger: GCGGGTGCTGGAGACTGGCCTGGTGTTGTGCCGGCATGCCAACACTGTCACGGAGGCTGCTCTGGCCTTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
||
| CDS CCA 72 bp | TGGCTGACGAGGCTCTGCACCATCTGGTCCAGGTTGTaGAAGTGGCAAGGCCTGCGGGCAGGGGGTATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WLTRLCTIWSRL*KWQGLRAGGMG Trigger: GCCCATACCCCCTGCCCGCAGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052521.9 |
||
| CDS CCA 72 bp | TGGCTGACGAGGCTCTGCACCATCTGGTCCAGGTTGTaGAAGTGGCAAGGCCAGGTCGCGCCGCAGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WLTRLCTIWSRL*KWQGQVAPQLL Trigger: GAGGAGCTGCGGCGCGACCTGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS CAA 90 bp | GGGCATGTGCAATGGCTGACGAGGCTCTGCACCATCTGGTCCAGGTaGTGGAAGTGGCAAGGCCTGCGGGCAGGGGGTATGGGCGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GHVQWLTRLCTIWSR*WKWQGLRAGGMGGG Trigger: ACCACCGCCCATACCCCCTGCCCGCAGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052521.9 |
||
| CDS CAA 72 bp | CAATGGCTGACGAGGCTCTGCACCATCTGGTCCAGGTaGTGGAAGTGGCAAGGCCAGGTCGCGCCGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QWLTRLCTIWSR*WKWQGQVAPQL Trigger: GAGCTGCGGCGCGACCTGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS CCA 72 bp | GGGCATGTGCAATGGCTGACGAGGCTCTGCACCATCTaGTCCAGGTTGTGGAAGTGGCAAGGCCTGCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GHVQWLTRLCTI*SRLWKWQGLRA Trigger: TGCCCGCAGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052521.9 |
||
| CDS CCA 72 bp | GGGCATGTGCAATGGCTGACGAGGCTCTGCACCATCTaGTCCAGGTTGTGGAAGTGGCAAGGCCAGGTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GHVQWLTRLCTI*SRLWKWQGQVA Trigger: CGCGACCTGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
||
| CDS CAA 72 bp | CAATGGCTGACGAGGCTCTGCACCATCTGGTCCAGGTaGTGGAAGTGGCAAGGCCTGCGGGCAGGGGGTATG | + |
|
Preference number: 6 (lower is better) Translates to: QWLTRLCTIWSR*WKWQGLRAGGM Trigger: CATACCCCCTGCCCGCAGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052521.9 |
||
| CDS CAA 90 bp | GCATGCCGGCACAACACCAGGCCAGTCTCCAGCACCCGCAGGAAGTaGTCTGCATCGATGTCCAGCCCGTACAGATCCCGAAGCCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: ACRHNTRPVSSTRRK*SASMSSPYRSRSHS Trigger: TGAGTGGCTTCGGGATCTGTACGGGCTGGACATCGATGCAGACAACTTCCTGCGGGTGCTGGAGACTGGCCTGGTGTTGTGCCGGCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
||
| CDS CCA 72 bp | ACGAGGCTCTGCACCATCTGGTCCAGGTTGTGGAAGTaGCAAGGCCAGGTCGCGCCGCAGCTCCTCATCAAT | + |
|
Preference number: 6 (lower is better) Translates to: TRLCTIWSRLWK*QGQVAPQLLIN Trigger: ATTGATGAGGAGCTGCGGCGCGACCTGGCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147301.2 |
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| CDS CAA 72 bp | CACAACACCAGGCCAGTCTCCAGCACCCGCAGGAAGTaGTCTGCATCGATGTCCAGCCCGTACAGATCCCGA | + |
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Preference number: 6 (lower is better) Translates to: HNTRPVSSTRRK*SASMSSPYRSR Trigger: TCGGGATCTGTACGGGCTGGACATCGATGCAGACAACTTCCTGCGGGTGCTGGAGACTGGCCTGGTGTTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
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| CDS CAA 72 bp | TGGATCCCCATCTCCTTGCGACACCACTGGATGAAGTaGGAGATGTTGTCCCTGGCCTGGAAGGTACCCGGC | + |
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Preference number: 6 (lower is better) Translates to: WIPISLRHHWMK*EMLSLAWKVPG Trigger: GCCGGGTACCTTCCAGGCCAGGGACAACATCTCCAACTTCATCCAGTGGTGTCGCAAGGAGATGGGGATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
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| CDS GCA 72 bp | AATTGCACTGGGCATGTGCAATGGCTGACGAGGCTCTaGACCATCTGGTCCAGGTTGTGGAAGTGGCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: NCTGHVQWLTRL*TIWSRLWKWQG Trigger: GCCTTGCCACTTCCACAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATGCCCAGTGCAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
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| CDS CAA 72 bp | ATTGCAGAAAACTCCAGCCTGGGGCATGGGAATCTTTaGAGCTCGCTCAGGTGCCTCAGCCAGGAAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: IAENSSLGHGNL*SSLRCLSQEGQ Trigger: CTGGCCTTCCTGGCTGAGGCACCTGAGCGAGCTCAAAAGATTCCCATGCCCCAGGCTGGAGTTTTCTGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
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| CDS TCA 72 bp | CCTCTTGGATCCCCATCTCCTTGCGACACCACTGGATaGAGTTGGAGATGTTGTCCCTGGCCTGGAAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: PLGSPSPCDTTG*SWRCCPWPGRY Trigger: GTACCTTCCAGGCCAGGGACAACATCTCCAACTTCATCCAGTGGTGTCGCAAGGAGATGGGGATCCAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
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| CDS CCA 72 bp | AGCACCTCTTGGATCCCCATCTCCTTGCGACACCACTaGATGAAGTTGGAGATGTTGTCCCTGGCCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: STSWIPISLRHH*MKLEMLSLAWK Trigger: CTTCCAGGCCAGGGACAACATCTCCAACTTCATCCAGTGGTGTCGCAAGGAGATGGGGATCCAAGAGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
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| CDS CCA 72 bp | ATCTTGACCATGGAGAATTGCACTGGGCATGTGCAATaGCTGACGAGGCTCTGCACCATCTGGTCCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ILTMENCTGHVQ*LTRLCTIWSRL Trigger: CAACCTGGACCAGATGGTGCAGAGCCTCGTCAGCCATTGCACATGCCCAGTGCAATTCTCCATGGTCAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
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| CDS CCA 72 bp | CTTCCCCTCAGATATCTTGACCATGGAGAATTGCACTaGGCATGTGCAATGGCTGACGAGGCTCTGCACCAT | + |
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Preference number: 6 (lower is better) Translates to: LPLRYLDHGELH*ACAMADEALHH Trigger: ATGGTGCAGAGCCTCGTCAGCCATTGCACATGCCCAGTGCAATTCTCCATGGTCAAGATATCTGAGGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052521.9 |
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| CDS CAA 72 bp | GTCTCGAACATCAGCACCTCTTGGATCCCCATCTCCTaGCGACACCACTGGATGAAGTTGGAGATGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: VSNISTSWIPIS*RHHWMKLEMLS Trigger: GGACAACATCTCCAACTTCATCCAGTGGTGTCGCAAGGAGATGGGGATCCAAGAGGTGCTGATGTTCGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052521.9 ENSMUST00000147301.2 |
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